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Taxonomy browser (Solanum tuberosum)

Solanum tuberosum

Taxonomy ID: 4113 (for references in articles please use NCBI:txid4113)
current name
Solanum tuberosum L., 1753
includes:
Solanum tuberosum subsp. tuberosum
Genbank common name: potato
NCBI BLAST name: eudicots
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 1 (Standard)
Plastid genetic code: Translation table 11 (Bacterial, Archaeal and Plant Plastid)
Other names:
heterotypic synonym
Solanum aracc-papa
common name(s) potatoes
Lineage( full )
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliopsida; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum
   Entrez records   
Database name Subtree links Direct links
Nucleotide 476,051 475,679
Protein 205,057 204,562
Structure 63 63
Genome 1 1
Popset 303 303
GEO Datasets 2,696 2,643
PubMed Central 12,259 12,257
Gene 35,281 35,146
SRA Experiments 23,763 23,399
GEO Profiles 32,448 32,448
Protein Clusters 80 80
Identical Protein Groups 134,995 134,919
BioProject 574 564
BioSample 19,790 19,425
Assembly 47 44
PubChem BioAssay 48 48
Taxonomy 2 1

Comments and References:

image:Solanum tuberosum
GRIN (Sept 02, 2010)
Name verified on 2 September 2010 in: USDA, ARS, National Genetic Resources Program. Germplasm Resources Information Network - (GRIN) [Online Database]. National Germplasm Resources Laboratory, Beltsville, Maryland.
Flora of China - Solanaceae
Zhi-Yun Zhang, Anmin Lu & William G. D'Arcy. Solanaceae A. L. Jussieu. In Wu, Z. Y. & P. H. Raven, eds. 1994. Flora of China. Vol. 17 (Verbenaceae through Solanaceae). Science Press, Beijing, and Missouri Botanical Garden Press, St. Louis. 342 pp.
Linnaean Plant Names
The Linnaean Plant Name Typification Project. 2004. The Natural History Museum, Cromwell Rd., London, SW7 5BD, UK.
Nee M 1999
Nee M. 1999. Synopsis of Solanum in the New World. In Nee M, Symon DE, Lester RN, and Jessop JP (Eds.). Solanaceae IV: Advances in Biology and Utilization. The Royal Botanic Gardens, Kew, pp. 285-333.

Genome Information

Go to NCBI genomic BLAST page for Solanum tuberosum
Genome view: 13 chromosomes
Names 1 2 3 4 5 6 7 8 9 10 11 12 Pltd

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Solanum tuberosum taxonomy taxonomy/phylogenetic Arctos Specimen Database
2 records from this provider supplemental materials Dryad Digital Repository
Solanum tuberosum L. taxonomy/phylogenetic Encyclopedia of life
GOLD: 5 Organisms organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
2507525040: Solanum tuberosum DM 1-3 516 R44 organism-specific Integrated Microbial Genomes
Solanum tuberosum L. taxonomy/phylogenetic Integrated Taxonomic Information System
Solanum tuberosum taxonomy/phylogenetic Lifemap
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
Solanum tuberosum taxonomy/phylogenetic PLANTS Database (USDA/NRCS)
potato nematodes taxonomy/phylogenetic Plant and Insect Parasitic Nematodes
Solanum tuberosum (L.) herbarium/museum collections PlantaeDB, University of Bucharest
Solanum tuberosum taxonomy/phylogenetic Plants of the World Online
Solanum tuberosum taxonomy/phylogenetic The International Plant Names Index
Solanum tuberosum taxonomy/phylogenetic TreeBase
2 records from this provider taxonomy/phylogenetic USDA-ARS GRIN Taxonomy
search W3TROPICOS taxonomy/phylogenetic Vascular Tropicos
WebScipio: Solanum tuberosum organism-specific WebScipio - eukaryotic gene identification
Solanum tuberosum L. taxonomy/phylogenetic World Register of Marine Species
diArk: Solanum tuberosum organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.

Reference: How to cite this resource - Schoch CL, et al. NCBI Taxonomy: a comprehensive update on curation, resources and tools. Database (Oxford). 2020: baaa062. PubMed: 32761142 PMC: PMC7408187.


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