8RDN: Holomycin methyltransferase DtpM with SAH and XRD-271

PDB ID: 8RDNDownload
MMDB ID: 253567
PDB Deposition Date: 2023/12/8
Updated in MMDB: 2024/12
Experimental Method:
x-ray diffraction
Resolution: 2.2  Å
Source Organism:
Similar Structures:
Biological Unit for 8RDN: dimeric; determined by author and by software (PISA)
Molecular Components in 8RDN
Label Count Molecule
Proteins (2 molecules)
2
Dtpm
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
2
S-ADENOSYL-L-HOMOCYSTEINE (Link to PubChem not yet available)S-ADENOSYL-L-HOMOCYSTEINE
2
2
~{N}-(5-oxidanylidene-4~{H}-[1,2]dithiolo[4,3-b]pyrrol-6-yl)hexanamide (Link to PubChem not yet available)~{N}-(5-oxidanylidene-4~{H}-[1,2]dithiolo[4,3-b]pyrrol-6-yl)hexanamide
3
1
SODIUM ION (Link to PubChem not yet available)SODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303