8KCB: Complex of DDM1-nucleosome(H2A) complex with DDM1 bound to SHL2

PDB ID: 8KCBDownload
MMDB ID: 248778
PDB Deposition Date: 2023/8/7
Updated in MMDB: 2024/08
Experimental Method:
electron microscopy
Resolution: 3.17  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 8KCB: undecameric; determined by author
Molecular Components in 8KCB
Label Count Molecule
Proteins (9 molecules)
2
Histone H2b.10
Molecule annotation
2
Histone H3.1
Molecule annotation
2
Histone H4
Molecule annotation
2
Histone H2a.6
Molecule annotation
1
Atp-dependent DNA Helicase Ddm1
Molecule annotation
Nucleotides(2 molecules)
1
DNA (170-mer)
Molecule annotation
1
DNA (170-mer)
Molecule annotation
Chemicals and Non-standard biopolymers (2 molecules)
1
1
BERYLLIUM TRIFLUORIDE IONBERYLLIUM TRIFLUORIDE ION
2
1
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303