7WFD: Left PSI in the cyclic electron transport supercomplex NDH-PSI from Arabidopsis

PDB ID: 7WFDDownload
MMDB ID: 213324
PDB Deposition Date: 2021/12/26
Updated in MMDB: 2022/05
Experimental Method:
electron microscopy
Resolution: 3.25  Å
Source Organism:
Similar Structures:
Biological Unit for 7WFD: hexadecameric; determined by author
Molecular Components in 7WFD
Label Count Molecule
Proteins (16 molecules)
1
Photosystem I P700 Chlorophyll a Apoprotein A1
Molecule annotation
1
Photosystem I P700 Chlorophyll a Apoprotein A2
Molecule annotation
1
Photosystem I Iron-sulfur Center
Molecule annotation
1
Photosystem I Reaction Center Subunit Ii-2, Chloroplastic
Molecule annotation
1
Photosystem I Reaction Center Subunit IV A, Chloroplastic
Molecule annotation
1
Photosystem I Reaction Center Subunit Iii, Chloroplastic
Molecule annotation
1
Photosystem I Reaction Center Subunit V, Chloroplastic
Molecule annotation
1
Photosystem I Reaction Center Subunit Vi-2, Chloroplastic
Molecule annotation
1
Photosystem I Reaction Center Subunit Viii
Molecule annotation
1
Photosystem I Reaction Center Subunit IX
Molecule annotation
1
Photosystem I Reaction Center Subunit Psak, Chloroplastic
Molecule annotation
1
Photosystem I Reaction Center Subunit XI, Chloroplastic
Molecule annotation
1
Chlorophyll A-B Binding Protein 6, Chloroplastic
Molecule annotation
1
Photosystem I Chlorophyll A/b-binding Protein 3-1, Chloroplastic
Molecule annotation
1
Chlorophyll A-B Binding Protein 4, Chloroplastic
Molecule annotation
1
Photosystem I Chlorophyll A/b-binding Protein 6, Chloroplastic
Molecule annotation
Chemicals and Non-standard biopolymers (211 molecules)
1
143
CHLOROPHYLL ACHLOROPHYLL A
2
2
PHYLLOQUINONEPHYLLOQUINONE
3
8
1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE
4
26
BETA-CAROTENEBETA-CAROTENE
5
3
IRON/SULFUR CLUSTERIRON/SULFUR CLUSTER
6
5
DODECYL-ALPHA-D-MALTOSIDEDODECYL-ALPHA-D-MALTOSIDE
7
1
DIGALACTOSYL DIACYL GLYCEROL (DGDG)DIGALACTOSYL DIACYL GLYCEROL (DGDG)
8
5
(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
9
3
1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE
10
11
CHLOROPHYLL BCHLOROPHYLL B
11
4
(3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303