7OYA: Cryo-EM structure of the 1 hpf zebrafish embryo 80S ribosome

PDB ID: 7OYADownload
MMDB ID: 217651
PDB Deposition Date: 2021/6/24
Updated in MMDB: 2022/07
Experimental Method:
electron microscopy
Resolution: 3.2  Å
Source Organism:
Similar Structures:
Biological Unit for 7OYA: 82-meric; determined by author
Molecular Components in 7OYA
Label Count Molecule
Proteins (78 molecules)
1
40S Ribosomal Protein SA
Molecule annotation
1
40S Ribosomal Protein S3A
Molecule annotation
1
40S Ribosomal Protein S2
Molecule annotation
1
40S Ribosomal Protein S4, X Isoform
Molecule annotation
1
40S Ribosomal Protein S6
Molecule annotation
1
40S Ribosomal Protein S7
Molecule annotation
1
40S Ribosomal Protein S8
Molecule annotation
1
40S Ribosomal Protein S9
Molecule annotation
1
40S Ribosomal Protein S11
Molecule annotation
1
40S Ribosomal Protein S13
Molecule annotation
1
Ribosomal Protein S14
Molecule annotation
1
40S Ribosomal Protein S17
Molecule annotation
1
40S Ribosomal Protein S21
Molecule annotation
1
40S Ribosomal Protein S15a
Molecule annotation
1
40S Ribosomal Protein S23
Molecule annotation
1
40S Ribosomal Protein S24
Molecule annotation
1
40S Ribosomal Protein S26
Molecule annotation
1
40S Ribosomal Protein S27
Molecule annotation
1
40S Ribosomal Protein S30
Molecule annotation
1
DNA-(apurinic or Apyrimidinic Site) Lyase
Molecule annotation
1
Ribosomal Protein S5
Molecule annotation
1
Ribosomal Protein S10
Molecule annotation
1
40S Ribosomal Protein S15
Molecule annotation
1
Ribosomal Protein S16
Molecule annotation
1
40S Ribosomal Protein S20
Molecule annotation
1
40S Ribosomal Protein S28
Molecule annotation
1
40S Ribosomal Protein S29
Molecule annotation
1
Guanine Nucleotide-binding Protein Subunit Beta-2-like 1
Molecule annotation
1
40S Ribosomal Protein S25
Molecule annotation
1
40S Ribosomal Protein S19
Molecule annotation
1
40S Ribosomal Protein S18
Molecule annotation
1
Zgc:103482
Molecule annotation
1
60S Ribosomal Protein L27
Molecule annotation
1
60S Ribosomal Protein L29
Molecule annotation
1
60S Ribosomal Protein L30
Molecule annotation
1
60S Ribosomal Protein L31
Molecule annotation
1
Ribosomal Protein L32
Molecule annotation
1
60S Ribosomal Protein L35a
Molecule annotation
1
60S Ribosomal Protein L34
Molecule annotation
1
60S Ribosomal Protein L35
Molecule annotation
1
60S Ribosomal Protein L36
Molecule annotation
1
Ribosomal Protein L37
Molecule annotation
1
60S Ribosomal Protein L38
Molecule annotation
1
60S Ribosomal Protein L36a
Molecule annotation
1
Zgc:171772
Molecule annotation
1
60S Ribosomal Protein L8
Molecule annotation
1
Ribosomal Protein L3
Molecule annotation
1
Ribosomal Protein L4
Molecule annotation
1
Ribosomal Protein L5B
Molecule annotation
1
60S Ribosomal Protein L6
Molecule annotation
1
Ribosomal Protein L7
Molecule annotation
1
60S Ribosomal Protein L7A
Molecule annotation
1
60S Ribosomal Protein L9
Molecule annotation
1
60S Ribosomal Protein L11
Molecule annotation
1
60S Ribosomal Protein L13
Molecule annotation
1
60S Ribosomal Protein L14
Molecule annotation
1
Ribosomal Protein L15
Molecule annotation
1
60S Ribosomal Protein L13a
Molecule annotation
1
60S Ribosomal Protein L17
Molecule annotation
1
Ribosomal Protein L18
Molecule annotation
1
60S Ribosomal Protein L19
Molecule annotation
1
60S Ribosomal Protein L21
Molecule annotation
1
Ribosomal Protein L22
Molecule annotation
1
60S Ribosomal Protein L23
Molecule annotation
1
60S Ribosomal Protein L24
Molecule annotation
1
Ribosomal Protein L23a
Molecule annotation
1
Atpase H+ Transporting V0 Subunit E1
Molecule annotation
1
Ribosomal Protein L39
Molecule annotation
1
60S Ribosomal Protein L41
Molecule annotation
1
60S Ribosomal Protein L28
Molecule annotation
1
60S Ribosomal Protein L10
Molecule annotation
1
60S Ribosomal Protein L18a
Molecule annotation
1
60S Ribosomal Protein L40
Molecule annotation
1
60S Ribosomal Protein L27a
Molecule annotation
1
Novel Protein Similar to Human Proliferation-associated 2G4 Protein (Pa2g4)
Molecule annotation
1
Eukaryotic Translation Elongation Factor 2
Molecule annotation
1
Eukaryotic Translation Initiation Factor 5A
Molecule annotation
1
Dap1b
Molecule annotation
Nucleotides(4 molecules)
1
18S rRNA
Molecule annotation
1
28S rRNA
Molecule annotation
1
5S rRNA
Molecule annotation
1
5.8s rRNA
Molecule annotation
Chemicals and Non-standard biopolymers (209 molecules)
7
ZINC ION (Link to PubChem not yet available)ZINC ION
202
MAGNESIUM ION (Link to PubChem not yet available)MAGNESIUM ION
* Click molecule labels to explore molecular sequence information.

Citing MMDB