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Biotechnology Information

6GMH: Structure of activated transcription complex Pol II-DSIF-PAF-SPT6

PDB ID:

MMDB ID:

165979

PDB Deposition Date:

2018/5/26

Updated in MMDB:

2024/12

Experimental Method:

electron microscopy

Resolution:

3.1 Å

Source Organism:

synthetic construct▼

Similar Structures:

Biological Unit for 6GMH: 23-meric; determined by author and by software (PISA)

Molecular Components in 6GMH
Label	Count	Molecule
Proteins (20 molecules)
A	1	Rpb1
B	1	DNA-directed RNA Polymerase Subunit Beta
C	1	RNA Polymerase II Subunit C
D	1	RNA Polymerase II Subunit D
E	1	RNA Polymerase II Subunit E
F	1	RNA Polymerase II Subunit F
G	1	RNA Polymerase II Subunit G
H	1	DNA-directed RNA Polymerases I, II, and III Subunit Rpabc3
I	1	DNA-directed RNA Polymerase II Subunit Rpb9
J	1	Rpb10
K	1	Rpb11
L	1	Rpb12
M	1	Transcription Elongation Factor Spt6,transcription Elongation Factor Spt6,transcription Elongation Factor Spt6
Q	1	Ctr9,rna Polymerase-associated Protein Ctr9 Homolog,rna Polymerase-associated Protein Ctr9 Homolog
U	1	Leo1,leo1,rna Polymerase-associated Protein Leo1
V	1	Paf1,rna Polymerase Ii-associated Factor 1 Homolog,rna Polymerase Ii-associated Factor 1 Homolog
W	1	WD Repeat-containing Protein 61
X	1	Cdc73
Y	1	Transcription Elongation Factor Spt4
Z	1	Transcription Elongation Factor Spt5
Nucleotides(3 molecules)
N	1	Non-template DNA
P	1	RNA
T	1	Template DNA
Chemicals and Non-standard biopolymers (10 molecules)
1	9	ZINC ION
2	1	MAGNESIUM ION

* Click molecule labels to explore molecular sequence information.

Citing MMDB