6EZN: Cryo-EM structure of the yeast oligosaccharyltransferase (OST) complex

PDB ID: 6EZNDownload
MMDB ID: 158411
PDB Deposition Date: 2017/11/16
Updated in MMDB: 2024/12
Experimental Method:
electron microscopy
Resolution: 3.3  Å
Source Organism:
Similar Structures:
Biological Unit for 6EZN: octameric; determined by software (PISA)
Molecular Components in 6EZN
Label Count Molecule
Proteins (8 molecules)
1
Dolichyl-diphosphooligosaccharide--protein Glycosyltransferase Subunit 1
(Gene symbol: OST1)
Molecule annotation
1
Dolichyl-diphosphooligosaccharide--protein Glycosyltransferase Subunit Ost2
(Gene symbol: OST2)
Molecule annotation
1
Dolichyl-diphosphooligosaccharide--protein Glycosyltransferase Subunit 3
(Gene symbol: OST3)
Molecule annotation
1
Dolichyl-diphosphooligosaccharide--protein Glycosyltransferase Subunit Ost4
(Gene symbol: OST4)
Molecule annotation
1
Dolichyl-diphosphooligosaccharide--protein Glycosyltransferase Subunit Ost5
(Gene symbol: OST5)
Molecule annotation
1
Dolichyl-diphosphooligosaccharide--protein Glycosyltransferase Subunit Stt3
(Gene symbol: STT3)
Molecule annotation
1
Dolichyl-diphosphooligosaccharide--protein Glycosyltransferase Subunit Wbp1
(Gene symbol: WBP1)
Molecule annotation
1
Dolichyl-diphosphooligosaccharide--protein Glycosyltransferase Subunit Swp1
(Gene symbol: SWP1)
Molecule annotation
Chemicals and Non-standard biopolymers (21 molecules)
1
9
2-acetamido-2-deoxy-beta-D-glucopyranose (Link to PubChem not yet available)2-acetamido-2-deoxy-beta-D-glucopyranose
2
2
beta-D-mannopyranose (Link to PubChem not yet available)beta-D-mannopyranose
3
5
alpha-D-mannopyranose (Link to PubChem not yet available)alpha-D-mannopyranose
4
4
1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE (Link to PubChem not yet available)1-PALMITOYL-2-LINOLEOYL-SN-GLYCERO-3-PHOSPHOCHOLINE
5
1
PHOSPHATIDYLETHANOLAMINE (Link to PubChem not yet available)PHOSPHATIDYLETHANOLAMINE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303