National Center for
Biotechnology Information

5XXB: Large subunit of Toxoplasma gondii ribosome

PDB ID:	5XXB Download
MMDB ID:	171432
PDB Deposition Date:	2017/7/3
Updated in MMDB:	2022/11
Experimental Method:	electron microscopy
Resolution:	3.17 Å
Source Organism:	Toxoplasma gondii
Similar Structures:

Molecular Components in 5XXB
Label	Count	Molecule
Proteins (41 molecules)
A	1	Ribosomal Protein UL2
B	1	Ribosomal Protein UL3
C	1	Ribosomal Protein UL4
D	1	Ribosomal Protein Ul18
E	1	Ribosomal Protein EL6
F	1	Ribosomal Protein Ul30
G	1	Ribosomal Protein EL8
H	1	Ribosomal Protein UL6
I	1	Ribosomal Protein Ul16
J	1	Ribosomal Protein UL5
K	1	Ribosomal Protein El13
L	1	Ribosomal Protein El14
M	1	Ribosomal Protein El15
N	1	Ribosomal Protein Ul13
O	1	Ribosomal Protein Ul22
P	1	Ribosomal Protein El18
Q	1	Ribosomal Protein El19
R	1	Ribosomal Protein El20
S	1	Ribosomal Protein El21
T	1	Ribosomal Protein El22
U	1	Ribosomal Protein Ul14
V	1	Ribosomal Protein El24
W	1	Ribosomal Protein Ul23
X	1	Ribosomal Protein Ul24
Y	1	Ribosomal Protein El27
Z	1	Ribosomal Protein Ul15
a	1	Ribosomal Protein El29
b	1	Ribosomal Protein El30
c	1	Ribosomal Protein El31
d	1	Ribosomal Protein El32
e	1	Ribosomal Protein El33
f	1	Ribosomal Protein El34
g	1	Ribosomal Protein Ul29
h	1	Ribosomal Protein El36
i	1	Ribosomal Protein El37
j	1	Ribosomal Protein El38
k	1	Ribosomal Protein El39
l	1	Ribosomal Protein El40
n	1	Ribosomal Protein El42
o	1	Ribosomal Protein El43
p	1	Ribosomal Protein El28
Nucleotides(3 molecules)
1	1	25S RNA
3	1	5S RNA
4	1	5.8s RNA

* Click molecule labels to explore molecular sequence information.

Citing MMDB

Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303