5TD5: Crystal Structure of Human APOBEC3B variant complexed with ssDNA

PDB ID: 5TD5Download
MMDB ID: 146065
PDB Deposition Date: 2016/9/16
Updated in MMDB: 2016/12
Experimental Method:
x-ray diffraction
Resolution: 1.718  Å
Source Organism:
Similar Structures:
Biological Unit for 5TD5: dimeric; determined by author and by software (PISA)
Molecular Components in 5TD5
Label Count Molecule
Protein (1 molecule)
1
DNA Dc->du-editing Enzyme Apobec-3b
(Gene symbol: APOBEC3B)
Molecule annotation
Nucleotide(1 molecule)
1
DNA (5'-d(p*tp*tp*cp*ap*t)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (18 molecules)
1
1
ZINC IONZINC ION
2
9
IODIDE IONIODIDE ION
3
6
1,2-ETHANEDIOL1,2-ETHANEDIOL
4
2
CHLORIDE IONCHLORIDE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303