5IIL: Crystal structure of the post-catalytic nick complex of DNA polymerase lambda with a templating 8-oxo-dG and incorporated dA

PDB ID: 5IILDownload
MMDB ID: 142449
PDB Deposition Date: 2016/3/1
Updated in MMDB: 2016/10
Experimental Method:
x-ray diffraction
Resolution: 1.96  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 5IIL: tetrameric; determined by author and by software (PISA)
Molecular Components in 5IIL
Label Count Molecule
Protein (1 molecule)
1
DNA Polymerase Lambda
Molecule annotation
Nucleotides(3 molecules)
1
DNA (5'-d(p*gp*cp*cp*g)-3')
Molecule annotation
1
DNA (5'-d(*cp*ap*gp*tp*ap*ap*t)-3')
Molecule annotation
1
DNA (5'-d(*cp*gp*gp*cp*ap*(8og)p*tp*ap*cp*tp*g)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
CITRIC ACIDCITRIC ACID
2
2
SODIUM IONSODIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303