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5BKE:
Crystal structure of AAD-2 in complex with Mn(II) and N-oxalylglycine
PDB ID:
5BKE
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MMDB ID:
175936
PDB Deposition Date:
2019/6/2
Updated in MMDB:
2023/10
Experimental Method:
x-ray diffraction
Resolution:
2.15 Å
Source Organism:
Bradyrhizobium diazoefficiens USDA 110
Similar Structures:
VAST+
Download sequence data
Biological Unit for 5BKE: heptameric; determined by software (PISA)
Molecular Components in 5BKE
Label
Count
Molecule
Proteins (7 molecules)
A
B
C
D
E
F
G
7
Alpha-ketoglutarate-dependent 2,4-dichlorophenoxyacetate Dioxygenase
(Gene symbol:
tfdA
)
Chemicals and Non-standard biopolymers (20 molecules)
1
7
MANGANESE (II) ION
2
7
N-OXALYLGLYCINE
3
6
POTASSIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303