3PV8: Crystal Structure of Bacillus DNA Polymerase I Large Fragment Bound to DNA and ddTTP-dA in Closed Conformation

PDB ID: 3PV8Download
MMDB ID: 94450
PDB Deposition Date: 2010/12/6
Updated in MMDB: 2011/11
Experimental Method:
x-ray diffraction
Resolution: 1.52  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 3PV8: trimeric; determined by author and by software (PISA)
Molecular Components in 3PV8
Label Count Molecule
Protein (1 molecule)
1
DNA Polymerase I
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*cp*cp*tp*gp*ap*cp*tp*cp*(2dt))-3')
Molecule annotation
1
DNA (5'-d(*c*ap*tp*ap*ap*gp*ap*gp*tp*cp*ap*gp*g)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (3 molecules)
1
1
MAGNESIUM IONMAGNESIUM ION
2
1
2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE2',3'-DIDEOXY-THYMIDINE-5'-TRIPHOSPHATE
3
1
SULFATE IONSULFATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303