NCBI
National Center for
Biotechnology Information
Search
3MKU:
Structure of a Cation-bound Multidrug and Toxin Compound Extrusion (MATE) transporter
Citation is unavailable
PDB ID:
3MKU
Download
MMDB ID:
85219
PDB Deposition Date:
2010/4/15
Updated in MMDB:
2010/10
Experimental Method:
x-ray diffraction
Resolution:
4.2 Å
Source Organism:
Vibrio cholerae O1 biovar El Tor str. N16961
Similar Structures:
VAST+
Download sequence data
Default Biological Unit
All Biological Units (2)
Asymmetric Unit
Biological Unit for 3MKU: monomeric; determined by author and by software (PISA)
Molecular Graphic
?
3D view
full-featured 3D viewer
Download Cn3D
Interactions
?
A
A: Multi antimicrobial extrusion protein (Na(+)/drug antiporter) MATE-like MDR efflux pump
1
RB: RUBIDIUM ION
Drag symbols to move
Double click symbols to explore molecules
Protein
Nucleotide
Chemical
Download Stucture Data
?
Download
Format:
ASN.1 (Cn3D)
PDB
XML
JSON
PNG (image)
Data Set:
alpha-Carbons
Single 3D structure
* Mouse right-click to bring up context menu
Molecular Components in 3MKU
Label
Count
Molecule
Protein (1 molecule)
A
1
Multi Antimicrobial Extrusion Protein (Na(+)/drug Antiporter) Mate-like MDR Efflux Pump
1 Protein
SS Diagram
3D Domains
1
100
200
300
400
460
460 residues, click to see VAST similar structures.
helix 4-28
helix 46-54
helix 57-73
helix 87-114
helix 131-149
helix 167-181
helix 191-212
helix 237-265
helix 276-287
helix 288-305
helix 316-335
helix 338-345
helix 355-369
helix 370-378
helix 386-408
helix 420-441
helix 451-458
strand 182-185
strand 186-190
Domain 1 (1-37): click to see VAST similar structures
1
Domain 2 (38-270): click to see VAST similar structures
2
Domain 1 (271-446): click to see VAST similar structures
1
click domain graphic to toggle highlight of corresponding residues in 3D viewer
Chemical and Non-standard biopolymers (1 molecule)
1
1
RUBIDIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303
You are here:
NCBI
>
Computational Biology Branch
>
Structure Group
> MMDB
Write to the Help Desk
HHS Vulnerability Disclosure