3M9N: Crystal Structure of Dpo4 in complex with DNA containing the major cisplatin lesion

PDB ID: 3M9NDownload
MMDB ID: 82826
PDB Deposition Date: 2010/3/22
Updated in MMDB: 2017/11
Experimental Method:
x-ray diffraction
Resolution: 1.93  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 3M9N: trimeric; determined by author and by software (PISA)
Molecular Components in 3M9N
Label Count Molecule
Protein (1 molecule)
1
DNA Polymerase IV
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*gp*gp*gp*gp*ap*ap*gp*gp*ap*ap*ap*gp*c)-3')
Molecule annotation
1
DNA (5'-d(*tp*cp*tp*gp*gp*cp*tp*tp*tp*cp*cp*tp*tp*cp*cp*cp*cp*c)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
3
CALCIUM IONCALCIUM ION
2
1
CYTIDINE-5'-TRIPHOSPHATECYTIDINE-5'-TRIPHOSPHATE
3
1
CisplatinCisplatin
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303