3GLI: Crystal Structure of the E. coli clamp loader bound to Primer-Template DNA and Psi Peptide

PDB ID: 3GLIDownload
MMDB ID: 72921
PDB Deposition Date: 2009/3/12
Updated in MMDB: 2011/05
Experimental Method:
x-ray diffraction
Resolution: 3.5  Å
Source Organism:
Escherichia coli K-12▼
Similar Structures:
Biological Unit for 3GLI: octameric; determined by author and by software (PISA)
Molecular Components in 3GLI
Label Count Molecule
Proteins (6 molecules)
1
DNA Polymerase III Subunit Delta
Molecule annotation
3
DNA Polymerase III Subunit TAU
Molecule annotation
1
DNA Polymerase III Subunit Delta'
Molecule annotation
1
DNA Polymerase III Subunit PSI
Molecule annotation
Nucleotides(2 molecules)
1
DNA (5'-d(*tp*tp*tp*tp*tp*tp*ap*tp*ap*gp*gp*cp*cp*ap*g)-3')
Molecule annotation
1
DNA (5'-d(*cp*tp*gp*gp*cp*cp*tp*ap*tp*a)-3')
Molecule annotation
Chemicals and Non-standard biopolymers (19 molecules)
1
5
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
2
5
BERYLLIUM TRIFLUORIDE IONBERYLLIUM TRIFLUORIDE ION
3
4
MAGNESIUM IONMAGNESIUM ION
4
5
ZINC IONZINC ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303