3EX8: Complex structure of bacillus subtilis RibG reduction mechanism in riboflavin biosynthesis

PDB ID: 3EX8Download
MMDB ID: 67812
PDB Deposition Date: 2008/10/16
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 2.56  Å
Source Organism:
Similar Structures:
Biological Unit for 3EX8: tetrameric; determined by author and by software (PISA)
Molecular Components in 3EX8
Label Count Molecule
Proteins (4 molecules)
4
Riboflavin Biosynthesis Protein Ribd
(Gene symbol: ribD)
Molecule annotation
Chemicals and Non-standard biopolymers (5 molecules)
1
4
ZINC IONZINC ION
2
1
[(2R,3S,4R,5E)-5-[(5-amino-2,6-dioxo-3H-pyrimidin-4-yl)imino]-2,3,4-trihydroxy-pentyl] dihydrogen phosphate[(2R,3S,4R,5E)-5-[(5-amino-2,6-dioxo-3H-pyrimidin-4-yl)imino]-2,3,4-trihydroxy-pentyl] dihydrogen phosphate
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303