3DXU: The crystal structure of core JMJD2D complexed with FE and N-oxalylglycine

PDB ID: 3DXUDownload
MMDB ID: 75581
PDB Deposition Date: 2008/7/25
Updated in MMDB: 2019/12
Experimental Method:
x-ray diffraction
Resolution: 2.2  Å
Source Organism:
Similar Structures:
Biological Unit for 3DXU: monomeric; determined by author
Molecular Components in 3DXU
Label Count Molecule
Protein (1 molecule)
1
Jmjc Domain-containing Histone Demethylation Protein 3D
(Gene symbol: KDM4D)
Molecule annotation
Chemicals and Non-standard biopolymers (9 molecules)
1
1
ZINC IONZINC ION
2
1
FE (II) IONFE (II) ION
3
3
SULFATE IONSULFATE ION
4
1
N-OXALYLGLYCINEN-OXALYLGLYCINE
5
3
GLYCEROLGLYCEROL
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303