3D12: Crystal Structures of Nipah Virus G Attachment Glycoprotein in Complex with its Receptor Ephrin-B3

PDB ID: 3D12Download
MMDB ID: 66169
PDB Deposition Date: 2008/5/2
Updated in MMDB: 2024/11
Experimental Method:
x-ray diffraction
Resolution: 3.005  Å
Source Organism:
Henipavirus nipahense▼
Similar Structures:
Biological Unit for 3D12: dimeric; determined by author and by software (PISA)
Molecular Components in 3D12
Label Count Molecule
Proteins (2 molecules)
1
Hemagglutinin-neuraminidase
Molecule annotation
1
Ephrin-b3
Molecule annotation
Chemicals and Non-standard biopolymers (21 molecules)
1
4
2-acetamido-2-deoxy-beta-D-glucopyranose (Link to PubChem not yet available)2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
2-acetamido-2-deoxy-beta-D-gulopyranose (Link to PubChem not yet available)2-acetamido-2-deoxy-beta-D-gulopyranose
3
1
alpha-L-galactopyranose (Link to PubChem not yet available)alpha-L-galactopyranose
4
15
SULFATE ION (Link to PubChem not yet available)SULFATE ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303