3ARF: Ternary crystal structure of the mouse NKT TCR-CD1d-C20:2

PDB ID: 3ARFDownload
MMDB ID: 89503
PDB Deposition Date: 2010/11/27
Updated in MMDB: 2023/11
Experimental Method:
x-ray diffraction
Resolution: 2.9  Å
Source Organism:
synthetic construct▼
Similar Structures:
Biological Unit for 3ARF: tetrameric; determined by author
Molecular Components in 3ARF
Label Count Molecule
Proteins (4 molecules)
1
Antigen-presenting Glycoprotein Cd1d1
Molecule annotation
1
Beta-2-microglobulin
Molecule annotation
1
NKT Valpha14-jalpha18,nkt Valpha14-jalpha18
Molecule annotation
1
Vbeta8.2,vbeta8.2
Molecule annotation
Chemicals and Non-standard biopolymers (7 molecules)
1
6
2-acetamido-2-deoxy-beta-D-glucopyranose2-acetamido-2-deoxy-beta-D-glucopyranose
2
1
(11Z,14E)-N-[(2S,3S,4R)-1-(alpha-D-galactopyranosyloxy)-3,4-dihydroxyoctadecan-2-yl]icosa-11,14-dienamide(11Z,14E)-N-[(2S,3S,4R)-1-(alpha-D-galactopyranosyloxy)-3,4-dihydroxyoctadecan-2-yl]icosa-11,14-dienamide
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303