2VGJ: Crystal structure of Actinomadura R39 DD-peptidase complexed with a peptidoglycan-mimetic cephalosporin

PDB ID: 2VGJDownload
MMDB ID: 68084
PDB Deposition Date: 2007/11/14
Updated in MMDB: 2023/12
Experimental Method:
x-ray diffraction
Resolution: 2.4  Å
Source Organism:
Similar Structures:
Biological Unit for 2VGJ: monomeric; determined by author and by software (PQS)
Molecular Components in 2VGJ
Label Count Molecule
Protein (1 molecule)
1
D-alanyl-d-alanine Carboxypeptidase
Molecule annotation
Chemicals and Non-standard biopolymers (6 molecules)
1
1
CEPHALOSPORINCEPHALOSPORIN
2
4
SULFATE IONSULFATE ION
3
1
MAGNESIUM IONMAGNESIUM ION
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303