NCBI
National Center for
Biotechnology Information
Search
2PJD:
Crystal structure of 16S rRNA methyltransferase RsmC
Citation is unavailable
PDB ID:
2PJD
Download
MMDB ID:
47225
PDB Deposition Date:
2007/4/16
Updated in MMDB:
2024/11
Experimental Method:
x-ray diffraction
Resolution:
2.1 Å
Source Organism:
Escherichia coli
Similar Structures:
VAST+
Download sequence data
Molecular Graphic
?
3D view
full-featured 3D viewer
Download Cn3D
Interactions
?
A
A: Ribosomal RNA small subunit methyltransferase C
Drag symbols to move
Double click symbols to explore molecules
Protein
Nucleotide
Chemical
Download Stucture Data
?
Download
Format:
ASN.1 (Cn3D)
PDB
XML
JSON
PNG (image)
Data Set:
alpha-Carbons
Single 3D structure
* Mouse right-click to bring up context menu
Molecular Components in 2PJD
Label
Count
Molecule
Protein (1 molecule)
A
1
Ribosomal RNA Small Subunit Methyltransferase C
(Gene symbol:
rsmC
)
1 Protein
SS Diagram
3D Domains
1
75
150
225
300
343
343 residues, click to see VAST similar structures.
helix 5-13
helix 49-56
helix 88-101
helix 183-191
helix 208-216
helix 230-243
helix 275-289
helix 309-317
strand 21-28
strand 40-47
strand 62-66
strand 78-84
strand 106-114
strand 129-134
strand 139-147
strand 159-165
strand 166-172
strand 197-204
strand 220-228
strand 247-252
strand 263-268
strand 297-305
strand 320-327
strand 328-335
Domain 1 (1-153): click to see VAST similar structures
1
Domain 2 (154-343): click to see VAST similar structures
2
click domain graphic to toggle highlight of corresponding residues in 3D viewer
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH.
"
MMDB and VAST+: tracking structural similarities between macromolecular complexes.
Nucleic Acids Res. 2014 Jan; 42(Database issue)
:D297-303
You are here:
NCBI
>
Computational Biology Branch
>
Structure Group
> MMDB
Write to the Help Desk
HHS Vulnerability Disclosure