2DY9: Crystal structure of nucleoside diphosphate kinase in complex with ADP

PDB ID: 2DY9Download
MMDB ID: 44900
PDB Deposition Date: 2006/9/8
Updated in MMDB: 2023/10
Experimental Method:
x-ray diffraction
Resolution: 2.01  Å
Source Organism:
Similar Structures:
Biological Unit for 2DY9: hexameric; determined by author and by software (PISA,PQS)
Molecular Components in 2DY9
Label Count Molecule
Proteins (6 molecules)
6
Nucleoside Diphosphate Kinase
(Gene symbol: PH_RS03290)
Molecule annotation
Chemicals and Non-standard biopolymers (15 molecules)
1
12
CHLORIDE IONCHLORIDE ION
2
3
ADENOSINE-5'-DIPHOSPHATEADENOSINE-5'-DIPHOSPHATE
* Click molecule labels to explore molecular sequence information.
Citing MMDB
Madej T, Lanczycki CJ, Zhang D, Thiessen PA, Geer RC, Marchler-Bauer A, Bryant SH. " MMDB and VAST+: tracking structural similarities between macromolecular complexes. Nucleic Acids Res. 2014 Jan; 42(Database issue):D297-303