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Conserved domains on  [gi|1980528356|ref|YP_009991669|]
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NADH dehydrogenase subunit 4L (mitochondrion) [Crotophaga sulcirostris]

Protein Classification

ND4L family protein( domain architecture ID 10009575)

ND4L family protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 5.13e-42

NADH dehydrogenase subunit 4L; Provisional


:

Pssm-ID: 177184  Cd Length: 98  Bit Score: 132.66  E-value: 5.13e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980528356  1 MSPLHLSFFSAFTMSSLGFAFHRTHLISALLCLESMMLSMYIALSTWPIETQTPSPTLMPILMLAFSACEAGTGLAMLVA 80
Cdd:MTH00125   1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                         90
                 ....*....|....*...
gi 1980528356 81 STRTHGSDHLHNLNLLQC 98
Cdd:MTH00125  81 TTRTHGSDHLKNLNLLQC 98
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 5.13e-42

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 132.66  E-value: 5.13e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980528356  1 MSPLHLSFFSAFTMSSLGFAFHRTHLISALLCLESMMLSMYIALSTWPIETQTPSPTLMPILMLAFSACEAGTGLAMLVA 80
Cdd:MTH00125   1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                         90
                 ....*....|....*...
gi 1980528356 81 STRTHGSDHLHNLNLLQC 98
Cdd:MTH00125  81 TTRTHGSDHLKNLNLLQC 98
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
3-98 4.00e-16

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 67.20  E-value: 4.00e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980528356  3 PLHLSFFSAFTMSSLGFAFHRtHLISALLCLESMMLSMYIALSTWPIETQTPSPTLMPILMLAFSACEAGTGLAMLVAST 82
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGLLLRR-NLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIY 79

                         90
                 ....*....|....*.
gi 1980528356 83 RTHGSDHLHNLNLLQC 98
Cdd:pfam00420 80 RTHGTDDVDSLNLLKG 95
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 1-96 4.74e-05

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 38.51  E-value: 4.74e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980528356  1 MSPLHLSFFSA--FTMSSLGFAFHRtHLISALLCLESMMLSMYIALSTWPIETQTPSPTLMPILMLAFSACEAGTGLAML 78
Cdd:COG0713    1 IPLEHYLILAAilFAIGLYGVLTRR-NLIVVLMSIELMLNAVNLNLVAFSRYLGDLDGQVFALFVIAVAAAEVAVGLAII 79

                         90
                 ....*....|....*...
gi 1980528356 79 VASTRTHGSDHLHNLNLL 96
Cdd:COG0713   80 VALYRNRGTIDVDDLNEL 97
 
Name Accession Description Interval E-value
ND4L MTH00125
NADH dehydrogenase subunit 4L; Provisional
 1-98 5.13e-42

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177184  Cd Length: 98  Bit Score: 132.66  E-value: 5.13e-42
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980528356  1 MSPLHLSFFSAFTMSSLGFAFHRTHLISALLCLESMMLSMYIALSTWPIETQTPSPTLMPILMLAFSACEAGTGLAMLVA 80
Cdd:MTH00125   1 MTPTHFSLYTAFMLSLLGLSFHRTHLMSALLCLESMMLSLFIMLSLWPITTQTPSFTPMPIILLTFSACEAGTGLALLVA 80

                         90
                 ....*....|....*...
gi 1980528356 81 STRTHGSDHLHNLNLLQC 98
Cdd:MTH00125  81 TTRTHGSDHLKNLNLLQC 98
ND4L MTH00126
NADH dehydrogenase subunit 4L; Provisional
 1-98 7.32e-39

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177185  Cd Length: 98  Bit Score: 124.69  E-value: 7.32e-39
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980528356  1 MSPLHLSFFSAFTMSSLGFAFHRTHLISALLCLESMMLSMYIALSTWPIETQTPSPTLMPILMLAFSACEAGTGLAMLVA 80
Cdd:MTH00126   1 MTPVHFSFSSAFILGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWALQLESTSFSAAPMLLLAFSACEASAGLALLVA 80

                         90
                 ....*....|....*...
gi 1980528356 81 STRTHGSDHLHNLNLLQC 98
Cdd:MTH00126  81 TARTHGTDRLQNLNLLQC 98
ND4L MTH00067
NADH dehydrogenase subunit 4L; Provisional
 1-98 4.30e-38

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177139  Cd Length: 98  Bit Score: 122.79  E-value: 4.30e-38
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980528356  1 MSPLHLSFFSAFTMSSLGFAFHRTHLISALLCLESMMLSMYIALSTWPIETQTPSPTLMPILMLAFSACEAGTGLAMLVA 80
Cdd:MTH00067   1 MSPTYFTFYSAFLLGLMGLAFHRTHLLSALLCLEGMMLSLFIALSLWSTQFESLSYFSLPMFMLTFSACEASTGLALMVA 80

                         90
                 ....*....|....*...
gi 1980528356 81 STRTHGSDHLHNLNLLQC 98
Cdd:MTH00067  81 TTRTHGTDHLKNLNLLQC 98
ND4L MTH00107
NADH dehydrogenase subunit 4L; Provisional
 1-98 1.97e-25

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177169  Cd Length: 98  Bit Score: 90.76  E-value: 1.97e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980528356  1 MSPLHLSFFSAFTMSSLGFAFHRTHLISALLCLESMMLSMYIALSTWPIETQTPSPTLMPILMLAFSACEAGTGLAMLVA 80
Cdd:MTH00107   1 MSLIYMNIMLAFTISLLGLLMYRSHLMSSLLCLEGMMLSLFIMATLTILNTHFTLASMMPIILLVFAACEAAVGLALLVM 80

                         90
                 ....*....|....*...
gi 1980528356 81 STRTHGSDHLHNLNLLQC 98
Cdd:MTH00107  81 VSNTYGTDYVQNLNLLQC 98
ND4L MTH00181
NADH dehydrogenase subunit 4L; Provisional
 4-96 2.88e-20

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214450  Cd Length: 93  Bit Score: 77.68  E-value: 2.88e-20
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980528356  4 LHLSFFSAFTMSSLGFAFHRTHLISALLCLESMMLSMYIALSTWPIETQTPSPTLMPILMLAFSACEAGTGLAMLVASTR 83
Cdd:MTH00181   1 MMFVFISAFILLLLGLSLYKTHLLSLLLCLEGMMLFLFLLLALFSLLSSSSSMLMFGLILLTFSACEAVLGLSLLVATNR 80

                         90
                 ....*....|...
gi 1980528356 84 THGSDHLHNLNLL 96
Cdd:MTH00181  81 THGSDHLLKFNLL 93
ND4L MTH00043
NADH dehydrogenase subunit 4L; Validated
 1-97 1.08e-16

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 214410  Cd Length: 98  Bit Score: 68.41  E-value: 1.08e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980528356  1 MSPLHLSFFSAFTMSSLGFAFHRTHLISALLCLESMMLSMYIALSTWPIETQTPSPTLMPILMLAFSACEAGTGLAMLVA 80
Cdd:MTH00043   1 MNIILIIILSSFFLGLLGILINRLHLLSILLCLELLLISLFLNISIWSLNYGNFSNLSFSLLLLTLSACEASIGLSLMVL 80

                         90
                 ....*....|....*..
gi 1980528356 81 STRTHGSDHLHNLNLLQ 97
Cdd:MTH00043  81 LSRNHNSDLVASLNLLQ 97
Oxidored_q2 pfam00420
NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;
3-98 4.00e-16

NADH-ubiquinone/plastoquinone oxidoreductase chain 4L;


Pssm-ID: 425672  Cd Length: 95  Bit Score: 67.20  E-value: 4.00e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980528356  3 PLHLSFFSAFTMSSLGFAFHRtHLISALLCLESMMLSMYIALSTWPIETQTPSPTLMPILMLAFSACEAGTGLAMLVAST 82
Cdd:pfam00420  1 AYLLLSGLLFLIGLYGLLLRR-NLLRVLLSLELMLNAVNLALVLFGRLTADPLPQALILTAIVIAAAEAAVGLALLVRIY 79

                         90
                 ....*....|....*.
gi 1980528356 83 RTHGSDHLHNLNLLQC 98
Cdd:pfam00420 80 RTHGTDDVDSLNLLKG 95
ND4L MTH00188
NADH dehydrogenase subunit 4L; Provisional
 18-98 1.01e-10

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177237  Cd Length: 97  Bit Score: 53.44  E-value: 1.01e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980528356 18 GFAFHRTHLISALLCLESMMLSMYIALSTWPieTQTPSPTLMPILMLAFSACEAGTGLAMLVASTRTHGSDHLHNLNLLQ 97
Cdd:MTH00188  19 TFLLNRKHLLMLLLSLEAIMLSLFWFLLVGL--SYMEKELYLSLVLLTFAACEASVGLALLVSLIRSHGSDYVSSLNLIK 96


                 .
gi 1980528356 98 C 98
Cdd:MTH00188  97 C 97
ND4L MTH00149
NADH dehydrogenase subunit 4L; Provisional
 1-98 4.77e-08

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 214434  Cd Length: 97  Bit Score: 46.38  E-value: 4.77e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980528356  1 MSPLHLSFFSAFTMSSLGFAFHRTHLISALLCLESMMLSMYIAL-STWPIetqTPSPTLMPILMLAFSACEAGTGLAMLV 79
Cdd:MTH00149   2 MFMLLLLSLFGFLMGVFALLFQYKHLLSILLSLEALMLSLLVMMfSSSGL---ISFSSYLFLIILTFGACEASLGLSLLV 78

                         90
                 ....*....|....*....
gi 1980528356 80 ASTRTHGSDHLHNLNLLQC 98
Cdd:MTH00149  79 SLIRLHGNDYVSSLSSLKF 97
ND4L MTH00162
NADH dehydrogenase subunit 4L; Provisional
 6-92 1.11e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177218  Cd Length: 89  Bit Score: 42.83  E-value: 1.11e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980528356  6 LSFFSAFTMSSLGFAFHRTHLISALLCLESMMLSMYIALSTWPIETQtpSPTLMPILMLAFSACEAGTGLAMLVASTRTH 85
Cdd:MTH00162   5 LIFLFMFFSGLLVFLSKRKHLLLMLLSLEFMVLSLFFLLFLYLSFFN--YELYFLLFFLTFSVCEGALGLSILVSMIRSH 82


                 ....*..
gi 1980528356 86 GSDHLHN 92
Cdd:MTH00162  83 GNDYFSS 89
ND4L MTH00013
NADH dehydrogenase subunit 4L; Validated
 1-98 1.50e-06

NADH dehydrogenase subunit 4L; Validated


Pssm-ID: 133655  Cd Length: 97  Bit Score: 42.43  E-value: 1.50e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980528356  1 MSPLHLSFFSAFtMSSLGFAFHRTHLISALLCLESMMLSMYIaLSTWPIETQTPSPTLMPILMLAFSACEAGTGLAMLVA 80
Cdd:MTH00013   2 MSPLFILSISPF-ISMFNLSLQRKHLLMSLLSLEAMILSLAL-FIPLSLMFANQVNGMLAIVLLTFGACEASLGLSLLVL 79

                         90
                 ....*....|....*...
gi 1980528356 81 STRTHGSDHLHNLNLLQC 98
Cdd:MTH00013  80 MTRSYGNDMLKSLTSNKC 97
ND4L MTH00180
NADH dehydrogenase subunit 4L; Provisional
 12-97 1.73e-06

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177231  Cd Length: 99  Bit Score: 42.33  E-value: 1.73e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980528356 12 FTMSSLGFAFHRTHLISALLCLESMMLSMYIALSTWPIETQTPSPTLMPILMLAFSACEAGTGLAMLVASTRTHGSDHLH 91
Cdd:MTH00180  13 FILGVLGIVLNRSNLIIMLMSIELMLLAISLLFLINSVAIDNLIGQIFTIMILTVAAAESAIGLAILVAYYRIRGTIAVK 92


                 ....*.
gi 1980528356 92 NLNLLQ 97
Cdd:MTH00180  93 SLNLLR 98
PRK05715 PRK05715
NADH-quinone oxidoreductase subunit NuoK;
1-96 9.88e-06

NADH-quinone oxidoreductase subunit NuoK;


Pssm-ID: 180218  Cd Length: 100  Bit Score: 40.55  E-value: 9.88e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980528356   1 MSPLHLSFFSA--FTMSSLGfAFHRTHLISALLCLESMMLSMYIALSTWPIETQTPSPTLMPILMLAFSACEAGTGLAML 78
Cdd:PRK05715    2 IPLQHYLILAAilFCIGLVG-LLLRRNAIVVLMSIELMLNAVNLNFVAFSSYLGDLDGQVFAFFVITVAAAEAAIGLAIL 80

                          90
                  ....*....|....*...
gi 1980528356  79 VASTRTHGSDHLHNLNLL 96
Cdd:PRK05715   81 LQLYRNRGTIDVDDLNEL 98
ND4L MTH00001
NADH dehydrogenase subunit 4L; Provisional
 12-97 4.04e-05

NADH dehydrogenase subunit 4L; Provisional


Pssm-ID: 177099  Cd Length: 99  Bit Score: 38.89  E-value: 4.04e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980528356 12 FTMSSLGFAFHRTHLISALLCLESMMLSMYIALSTWPIETQTPSPTLMPILMLAFSACEAGTGLAMLVASTRTHGSDHLH 91
Cdd:MTH00001  13 FLLGIWGIILNRGHFIIMLVSIELVLLSTFFLFLINSIEIDLLIEQIFTIMGLTIAAAESAIGLAIMVAYYRIRGTISLK 92


                 ....*.
gi 1980528356 92 NLNLLQ 97
Cdd:MTH00001  93 SLNSLR 98
NuoK COG0713
NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; ...
 1-96 4.74e-05

NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440477  Cd Length: 99  Bit Score: 38.51  E-value: 4.74e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1980528356  1 MSPLHLSFFSA--FTMSSLGFAFHRtHLISALLCLESMMLSMYIALSTWPIETQTPSPTLMPILMLAFSACEAGTGLAML 78
Cdd:COG0713    1 IPLEHYLILAAilFAIGLYGVLTRR-NLIVVLMSIELMLNAVNLNLVAFSRYLGDLDGQVFALFVIAVAAAEVAVGLAII 79

                         90
                 ....*....|....*...
gi 1980528356 79 VASTRTHGSDHLHNLNLL 96
Cdd:COG0713   80 VALYRNRGTIDVDDLNEL 97
ND4 MTH00127
NADH dehydrogenase subunit 4; Provisional
 61-98 3.32e-04

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177186 [Multi-domain]  Cd Length: 459  Bit Score: 38.01  E-value: 3.32e-04
                          10        20        30
                  ....*....|....*....|....*....|....*...
gi 1980528356  61 ILMLAFSACEAGTGLAMLVASTRTHGSDHLHNLNLLQC 98
Cdd:MTH00127  395 ALTGLGTLITAGYSLYMFLMTQRGPLPDHIIALNPSHT 432
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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