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Conserved domains on  [gi|1693290054|ref|YP_009651549|]
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NADH dehydrogenase subunit 5 (mitochondrion) [Megatherium americanum]

Protein Classification

NADH dehydrogenase subunit 5( domain architecture ID 11475900)

NADH dehydrogenase subunit 5 (ND5/NADH5) is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain; the immediate electron acceptor for the enzyme is believed to be ubiquinone

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
1-591 0e+00

NADH dehydrogenase subunit 5; Provisional


:

Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 1106.45  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054   1 MNLFSTLTLTTLLILIMPIILSTSKIYHTNLYPNYVKTSIMYALSTSTIPTTLYIWSGQEMVISNWHWMTTQTMKFTLSF 80
Cdd:MTH00108    1 MNLFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  81 KLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00108   81 KLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 161 RTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIFMINLNENTLPLLGLLLAATGKSAQFGLHPWLPSAMEGP 240
Cdd:MTH00108  161 RTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 241 TPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
Cdd:MTH00108  241 TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 321 QPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESAN 400
Cdd:MTH00108  321 QPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAAN 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 401 TSYTNAWALLITLIATSLTAIYSTRIIFFALLNQPRFQASTPIDENNPHLINPIKRLAAGSVFAGFLISNNIMPMTTPQM 480
Cdd:MTH00108  401 TSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQM 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 481 TMPTHLKLSALTVTILGFLLAMELNQLTHNLQFKTPSPLHTFSNLLGFFPTIMHRTPPHLALTTGQNLASTLLDLIWFEK 560
Cdd:MTH00108  481 TMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
                         570       580       590
                  ....*....|....*....|....*....|.
gi 1693290054 561 VAPKSLPQLNLLASINISNQKGLIKLYSLSF 591
Cdd:MTH00108  561 ILPKTISLIQMKASTTISNQKGLIKLYFLSF 591
 
Name Accession Description Interval E-value
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
1-591 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 1106.45  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054   1 MNLFSTLTLTTLLILIMPIILSTSKIYHTNLYPNYVKTSIMYALSTSTIPTTLYIWSGQEMVISNWHWMTTQTMKFTLSF 80
Cdd:MTH00108    1 MNLFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  81 KLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00108   81 KLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 161 RTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIFMINLNENTLPLLGLLLAATGKSAQFGLHPWLPSAMEGP 240
Cdd:MTH00108  161 RTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 241 TPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
Cdd:MTH00108  241 TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 321 QPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESAN 400
Cdd:MTH00108  321 QPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAAN 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 401 TSYTNAWALLITLIATSLTAIYSTRIIFFALLNQPRFQASTPIDENNPHLINPIKRLAAGSVFAGFLISNNIMPMTTPQM 480
Cdd:MTH00108  401 TSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQM 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 481 TMPTHLKLSALTVTILGFLLAMELNQLTHNLQFKTPSPLHTFSNLLGFFPTIMHRTPPHLALTTGQNLASTLLDLIWFEK 560
Cdd:MTH00108  481 TMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
                         570       580       590
                  ....*....|....*....|....*....|.
gi 1693290054 561 VAPKSLPQLNLLASINISNQKGLIKLYSLSF 591
Cdd:MTH00108  561 ILPKTISLIQMKASTTISNQKGLIKLYFLSF 591
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
58-501 4.71e-142

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 425.34  E-value: 4.71e-142
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  58 GQEMVISNWHWMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNL 137
Cdd:COG1009    54 GGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNL 133
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 138 FQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIFminlnENTLPLLGLL 217
Cdd:COG1009   134 LLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELL-----AAAPTILSSP 208
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 218 LAATG----------KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLF 287
Cdd:COG1009   209 LLTLIllllllgafgKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALF 288
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 288 TAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLnNEQDIRKMGGLFKALP 367
Cdd:COG1009   289 AALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRKMGGLRKKMP 367
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 368 LTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTSYTNAWALLITLIATS-LTAIYSTRIIFFALLNQPRFQASTPIDEN 446
Cdd:COG1009   368 ITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLGAfLTAFYSFRLFFLVFFGKPRPKTPKHPHES 447
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1693290054 447 NPHLINPIKRLAAGSVFAGFLISNNIMPMTTPQMTMPTHLKLS--------ALTVTILGFLLA 501
Cdd:COG1009   448 PWLMTLPLVVLAVLSLVLGLLLPGLLEGLLAPAAVLGGELHLAhglllnalPLLLSLLGIALG 510
NDH_I_L TIGR01974
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ...
66-501 6.93e-132

proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273905 [Multi-domain]  Cd Length: 609  Bit Score: 399.35  E-value: 6.93e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  66 WHWMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWE 145
Cdd:TIGR01974  65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWE 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 146 GVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIF-MINLNENTLPLLGLLLAATG-- 222
Cdd:TIGR01974 145 GVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFaLAPGAFFSALTLICLLLFIGam 224
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 223 -KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLFTAICALTQNDIKKI 301
Cdd:TIGR01974 225 gKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRI 304
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 302 VAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPLTTSSLIIGSLALT 381
Cdd:TIGR01974 305 LAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALI 384
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 382 GIPFLTGFYSKDLIIESANTSYTNAWALLITLIATSLTAIYSTRIIFFALLNQPRFQASTPIDENNPHLINPIKRLAAGS 461
Cdd:TIGR01974 385 GFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGS 464
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|
gi 1693290054 462 VFAGFLISNNIMPMTTPQMTMPTHL----------KLSALTVTILGFLLA 501
Cdd:TIGR01974 465 VFAGFFIVPLFEFLKGVLPTSAEPAlehhhvpaleIWSPTAVAILGILLA 514
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
134-416 2.32e-55

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 189.45  E-value: 2.32e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 134 ANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIFMI-----NLNE 208
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKAltgglNSSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 209 NTLPLLGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLVRFYPLLQ-DNNLVLTLAMCLGAITTL 286
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLpSSPFIQQILLILAIISML 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 287 FTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLF 363
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1693290054 364 KALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTSYTNaWALLITLIAT 416
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWI-FLVLAGVVGS 291
 
Name Accession Description Interval E-value
ND5 MTH00108
NADH dehydrogenase subunit 5; Provisional
1-591 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177170 [Multi-domain]  Cd Length: 602  Bit Score: 1106.45  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054   1 MNLFSTLTLTTLLILIMPIILSTSKIYHTNLYPNYVKTSIMYALSTSTIPTTLYIWSGQEMVISNWHWMTTQTMKFTLSF 80
Cdd:MTH00108    1 MNLFTSSTLLTLLILTLPIIMTLTNPYKTNNYPLYVKTTISYAFIISLIPTMMFIHSGQEMIISNWHWMTIQTLKLSLSF 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  81 KLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:MTH00108   81 KLDYFSMIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMLILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 161 RTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIFMINLNENTLPLLGLLLAATGKSAQFGLHPWLPSAMEGP 240
Cdd:MTH00108  161 RTDANTAALQAILYNRIGDIGFILAMAWFLLNLNSWDLQQIFMLNPNNSNLPLMGLLLAATGKSAQFGLHPWLPSAMEGP 240
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 241 TPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
Cdd:MTH00108  241 TPVSALLHSSTMVVAGVFLLIRFHPLMENNKTIQTLTLCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 321 QPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESAN 400
Cdd:MTH00108  321 QPHLAFLHICTHAFFKAMLFMCSGSIIHNLNDEQDIRKMGGLFKTLPFTSTALIIGSLALTGMPFLTGFYSKDLIIEAAN 400
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 401 TSYTNAWALLITLIATSLTAIYSTRIIFFALLNQPRFQASTPIDENNPHLINPIKRLAAGSVFAGFLISNNIMPMTTPQM 480
Cdd:MTH00108  401 TSYTNAWALLITLIATSLTAAYSTRIIFFALLGQPRFPPLITINENNPLLINPIKRLLLGSIFAGFLISNNIPPTTIPQM 480
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 481 TMPTHLKLSALTVTILGFLLAMELNQLTHNLQFKTPSPLHTFSNLLGFFPTIMHRTPPHLALTTGQNLASTLLDLIWFEK 560
Cdd:MTH00108  481 TMPLYLKLTALAVTILGFILALELNLLTNNLKFKYPSNTFKFSNMLGYFPTIMHRLPPYMNLTMSQKLASMLLDLIWLEK 560
                         570       580       590
                  ....*....|....*....|....*....|.
gi 1693290054 561 VAPKSLPQLNLLASINISNQKGLIKLYSLSF 591
Cdd:MTH00108  561 ILPKTISLIQMKASTTISNQKGLIKLYFLSF 591
ND5 MTH00137
NADH dehydrogenase subunit 5; Provisional
34-587 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214428 [Multi-domain]  Cd Length: 611  Bit Score: 925.77  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  34 NYVKTSIMYALSTSTIPTTLYIWSGQEMVISNWHWMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPN 113
Cdd:MTH00137   38 THVKTAVKTAFFVSLLPLFLFLNQGAETIITNWNWMNTLTFDINISFKFDHYSIIFTPIALYVTWSILEFASWYMHADPN 117
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 114 INRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHS 193
Cdd:MTH00137  118 MNRFFKYLLIFLIAMIILVTANNMFQLFIGWEGVGIMSFLLIGWWYGRADANTAALQAVIYNRVGDIGLILAMAWMATNL 197
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 194 NSWELQQIFMINLNENTLPLLGLLLAATG-KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNL 272
Cdd:MTH00137  198 NSWEIQQIFALSKDFDLTLPLLGLILAATgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLIRLSPLMENNQT 277
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 273 VLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNN 352
Cdd:MTH00137  278 ALTTCLCLGALTTLFTATCALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFLHICTHAFFKAMLFLCSGSIIHSLND 357
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 353 EQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTSYTNAWALLITLIATSLTAIYSTRIIFFALL 432
Cdd:MTH00137  358 EQDIRKMGGLHHLTPFTSSCLTIGSLALTGTPFLAGFFSKDAIIEALNTSHLNAWALTLTLIATSFTAVYSLRVVFFVSM 437
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 433 NQPRFQASTPIDENNPHLINPIKRLAAGSVFAGFLISNNIMPMTTPQMTMPTHLKLSALTVTILGFLLAMELNQLThNLQ 512
Cdd:MTH00137  438 GHPRFNPLSPINENNPAVINPIKRLAWGSIIAGLLITSNILPLKTPVMTMPPLLKLAALIVTILGLLIALELASLT-NKQ 516
                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1693290054 513 FK-TPS-PLHTFSNLLGFFPTIMHRTPPHLALTTGQNLASTLLDLIWFEKVAPKSLPQLNLLASINISN-QKGLIKLY 587
Cdd:MTH00137  517 FKpTPTlPPHHFSNMLGFFPAIIHRLTPKLNLTLGQTIATQMVDQTWLEKTGPKGIASLQLPLITTTSNiQQGMIKTY 594
ND5 MTH00004
NADH dehydrogenase subunit 5; Validated
32-591 0e+00

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 214398 [Multi-domain]  Cd Length: 602  Bit Score: 864.86  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  32 YPNYVKTSIMYALSTSTIPTTLYIWSGQEMVISNWHWMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSD 111
Cdd:MTH00004   32 SPTTIKTTVKLAFLISLIPLTLFLNSGTESITTNWPWIFTTTFNIPISFKLDQYSLMFLPIALFVTWSILEFSTWYMASD 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 112 PNINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLL 191
Cdd:MTH00004  112 PHITKFFKYLLIFLIAMLILITANNMFQLFIGWEGVGIMSFLLIGWWSGRAEANTAALQAIIYNRIGDIGLILSMAWLAM 191
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 192 HSNSWELQQIFMiNLNENTLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNN 271
Cdd:MTH00004  192 TLNTWEIQQLFS-PTQTPTLPLLGLILAATGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRTHPLLQNNQ 270
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 272 LVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLN 351
Cdd:MTH00004  271 TALTICLCLGALTTLFAATCALTQNDIKKIIAFSTSSQLGLMMVTIGLNQPQLAFLHISTHAFFKAMLFLCSGSIIHNLN 350
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 352 NEQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTSYTNAWALLITLIATSLTAIYSTRIIFFAL 431
Cdd:MTH00004  351 NEQDIRKMGGLQKTLPITSSCLTIGNLALMGTPFLSGFYSKDTIIETLNTSYLNAWALLLTLLATSFTAAYSLRMILLVQ 430
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 432 LNQPRFQASTPIDENNPHLINPIKRLAAGSVFAGFLISNNIMPMTTPQMTMPTHLKLSALTVTILGFLLAMELNQLTHNL 511
Cdd:MTH00004  431 TGFPRTPPTTPINENTPTIINPITRLALGSILAGLLISSTILPTKTPPMTMPTTTKLAALIVTILGILLALELSNMTTTL 510
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 512 QFKTPSPLHTFSNLLGFFPTIMHRTPPHLALTTGQNLASTLLDLIWFEKVAPKSLPQLNLLASINISN-QKGLIKLYSLS 590
Cdd:MTH00004  511 TPPKQNTLHNFSNQLAFFNPLTHRLLPMTLLKSSQKIATHLIDLSWLEKMGPKGLANLQLTASKTLTTlQKGLIKNYLTS 590

                  .
gi 1693290054 591 F 591
Cdd:MTH00004  591 F 591
ND5 MTH00066
NADH dehydrogenase subunit 5; Provisional
29-591 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214416 [Multi-domain]  Cd Length: 598  Bit Score: 847.27  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  29 TNLYPNYVKTSIMYALSTSTIPTTLYIWSGQEMVISNWHWMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYM 108
Cdd:MTH00066   27 SNNFHTNVKTSVKTAFFISLIPLMIFINQGLESITTSFHWMNIFNFNINSSFKFDQYSIIFLPIALFVTWSILEFAIWYM 106
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 109 HSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAW 188
Cdd:MTH00066  107 HSDPKINRFFKYLLIFLIAMMILVTANNLFQLFIGWEGVGIMSFLLIGWWHARADANTAALQAVLYNRVGDIGLILSMAW 186
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 189 FLLHSNSWELQQIFMINlNENTLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQ 268
Cdd:MTH00066  187 LAMNTNSWELQQIFLLN-DNSTLPLLGLILAAAGKSAQFGLHPWLPAAMEGPTPVSALLHSSTMVVAGIFLLIRFHPLLE 265
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 269 DNNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIH 348
Cdd:MTH00066  266 NNQTALTICLCLGALTTLFTAACALTQNDIKKIVAFSTSSQLGLMMVTIGLNQPQLAFFHICTHAFFKAMLFLCSGSIIH 345
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 349 NLNNEQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTSYTNAWALLITLIATSLTAIYSTRIIF 428
Cdd:MTH00066  346 SLNDEQDIRKMGGLQKALPITTSCLTIGSLALTGTPFLAGFFSKDAIIEAMNTSNLNSWALILTLIATSFTAVYSFRIIY 425
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 429 FALLNQPRFQASTPIDENNPHLINPIKRLAAGSVFAGFLISNNIMPMTTPQMTMPTHLKLSALTVTILGFLLAMELNQLT 508
Cdd:MTH00066  426 FSSMKFPRSLPLSPINENNPLIINPIKRLAWGSIIAGLLIIFNILPMKPQILTMPTFMKLAALLVTLLGLLIALDLAKIT 505
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 509 HNLqfKTPSPLHTFSNLLGFFPTIMHRTPPHLALTTGQNLASTLLDLIWFEKVAPKSLPQLNLLASINISN-QKGLIKLY 587
Cdd:MTH00066  506 SKT--TPKTKMHSFSNLLAFFPTIIHRLSPKTNLNSGQNIATHLTDMTWYEKSGPKGLTNQQLPPIKTITNiQTGLIKTY 583

                  ....
gi 1693290054 588 SLSF 591
Cdd:MTH00066  584 LTLF 587
ND5 MTH00211
NADH dehydrogenase subunit 5; Provisional
26-587 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214459 [Multi-domain]  Cd Length: 597  Bit Score: 691.69  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  26 IYHTNLYPNYVKTSIMYALSTSTIPTTLYIWSGQEMVISNWHWMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSM 105
Cdd:MTH00211   21 LLPLNNSKLHIKKAVKLSFFISLIPLLIFLDQGLETILTNWSWINLGLFSLNLSFKFDFYSIFFTSVALYVTWSILEFSL 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 106 WYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILA 185
Cdd:MTH00211  101 WYMSSEPNINRFFKYLLLFLIFMLILVSANNLFQLFIGWEGVGIMSFLLISWWYGRSDANTAALQAVIYNRIGDIGLLLS 180
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 186 MAWFLLHSNSWELQQIFmINLNENTLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYP 265
Cdd:MTH00211  181 MVWLLLNLNSWEISQLF-ILNLDLTLFLLGLLLAAMGKSAQFGFHPWLPSAMEGPTPVSALLHSSTMVVAGVFLLIRLSP 259
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 266 LLQDNNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGS 345
Cdd:MTH00211  260 LFQNNQLILGAVLLLGALTMLFGALCALTQNDIKKIVAFSTTSQLGLMMVTLGLNQPQLAFLHICTHAFFKAMLFMCSGS 339
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 346 IIHNLNNEQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTSYTNAWALLITLIATSLTAIYSTR 425
Cdd:MTH00211  340 IIHGLNNEQDIRKMGGLSKNLPFTSSCLFLGSLALMGFPFLSGFFSKDLILESMNGSYLNAWALLLTLLATSLTAAYSFR 419
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 426 IIFFALLNQPRFQASTPIDENNPHLINPIKRLAAGSVFAGFLISNNIMPMTTPQMTMPTHLKLSALTVTILGFLLAMELN 505
Cdd:MTH00211  420 LIFLSLGGYPRFLSLSPINENYKLLKNPLKRLALGSILAGFIITSNLPPEKPEILSLPFLLKLMPLLVTIVGLLLGLELV 499
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 506 QLTHNlqfKTPSPLHTFSNLLGFFPTIMHRTPPHLALTTGQNLASTLLDLIWFEKVAPKSLPQLNLLASINISN-QKGLI 584
Cdd:MTH00211  500 NLTHK---QLKTSTLSFSNMLGYYPPIIHRLLPKLSLKWGQTLSTHLMDLGWYEKLGPKGLGVNQKKLIKLVTSpQQGLI 576

                  ...
gi 1693290054 585 KLY 587
Cdd:MTH00211  577 KSY 579
ND5 MTH00208
NADH dehydrogenase subunit 5; Provisional
1-591 0e+00

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177251 [Multi-domain]  Cd Length: 628  Bit Score: 564.21  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054   1 MNLFSTLTLTTLLILIMPIILSTSKIYHTNLYPNYVKTSIMYALS-TSTIPTTLYIWSG-QEMVISNWHWMTTQTMKFTL 78
Cdd:MTH00208   22 ISIFFSSNLPNISTSNASLGGNNNNNSIINYNNSNFSISLLKTLAfLSLINLLIWILLGcPNINISLSNWLSNTLFNFSL 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  79 SFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWW 158
Cdd:MTH00208  102 SFIFDFYFILFFSVALFVTWSIIEFSHYYMSNDPNKNAFFRLLIIFLLNMLILTSSNNLFLLFIGWEGVGFLSFLLISWW 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 159 YGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIFMINLNENTLPLLGLLLAATG---KSAQFGLHPWLPS 235
Cdd:MTH00208  182 TTRNDANSSALQAVIYNRIGDIGIILFLSLSLINFNSWNLNEILSLNNSNSFLINILLFGILLAaagKSAQFGLHPWLPA 261
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 236 AMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMV 315
Cdd:MTH00208  262 AMEGPTPVSALLHSSTMVVAGVFLLIRTSPLISNSPWFLSLCLILGSLTALFAASTAISQHDIKKIIAYSTTSQLGLMVV 341
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 316 TIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLI 395
Cdd:MTH00208  342 AIGLNQPNLALFHICTHAFFKAMLFLCSGSIIHSLNNEQDLRKMGGLSFLLPVTSSCIILGSLALMGTPFLAGFYSKDLI 421
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 396 IESANTSYTNAWALLITLIATSLTAIYSTRIIFFALLNQPRFQASTPIDENNPHLINPIKRLAAGSVFAGFLISNNIMPm 475
Cdd:MTH00208  422 LEAGLASISNLLSIILALIATLLTAVYSFRIIFFCFLNNPSFSPLSPISEENPNLTNPLLRLAIGTIISGWFFSNFVFN- 500
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 476 tTPQMTMPTHLKLSALTVTILG-FLLAMELNQLTHNLqfkTPSPLHTFSNLLGFFPTIMHRTPPHLALTTGQNLASTLLD 554
Cdd:MTH00208  501 -LPPLTLPLILKSLPLIVTIIGaAFSFSFLLSLSSNP---INSNFFSFLSNQWFFVNISHSIIISFSFFTSLFGSTRTLD 576
                         570       580       590
                  ....*....|....*....|....*....|....*...
gi 1693290054 555 LIWFEKVAPKSLPQLNL-LASINISNQKGLIKLYSLSF 591
Cdd:MTH00208  577 RGWSENIGPQGIGNTSStLSKSYQLTQTGYIKQYLLSS 614
NuoL COG1009
Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ ...
58-501 4.71e-142

Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit [Energy production and conversion]; Membrane H+-translocase/NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440633 [Multi-domain]  Cd Length: 608  Bit Score: 425.34  E-value: 4.71e-142
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  58 GQEMVISNWHWMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNL 137
Cdd:COG1009    54 GGEVVVELYTWIPVGSLGLDFGFRLDGLSLLMLLLVTGVGLLVHIYSIGYMSGDPGLARFFAYLLLFMAAMLGLVLSDNL 133
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 138 FQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIFminlnENTLPLLGLL 217
Cdd:COG1009   134 LLLFVFWELVGLCSYLLIGFWYEKPSARRAARKAFLVTRVGDLGLLLGILLLGAIAGTLNFSELL-----AAAPTILSSP 208
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 218 LAATG----------KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLF 287
Cdd:COG1009   209 LLTLIllllllgafgKSAQFPLHFWLPDAMEGPTPVSALLHAATMVKAGVYLLARLSPLFALSPVWLTVVAIIGAITALF 288
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 288 TAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLnNEQDIRKMGGLFKALP 367
Cdd:COG1009   289 AALIALAQTDIKRVLAYSTVSQLGYMFLALGVGAYVAALFHLLTHAFFKALLFLGAGSVIHAT-GTRDIRKMGGLRKKMP 367
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 368 LTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTSYTNAWALLITLIATS-LTAIYSTRIIFFALLNQPRFQASTPIDEN 446
Cdd:COG1009   368 ITAITFLIGALSLAGIPPFAGFFSKEAILEAALEAGGLGPLLLAVALLGAfLTAFYSFRLFFLVFFGKPRPKTPKHPHES 447
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1693290054 447 NPHLINPIKRLAAGSVFAGFLISNNIMPMTTPQMTMPTHLKLS--------ALTVTILGFLLA 501
Cdd:COG1009   448 PWLMTLPLVVLAVLSLVLGLLLPGLLEGLLAPAAVLGGELHLAhglllnalPLLLSLLGIALG 510
PRK06590 PRK06590
NADH:ubiquinone oxidoreductase subunit L; Reviewed
57-501 5.65e-136

NADH:ubiquinone oxidoreductase subunit L; Reviewed


Pssm-ID: 235836 [Multi-domain]  Cd Length: 624  Bit Score: 410.32  E-value: 5.65e-136
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  57 SGQEMVISNWHWMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANN 136
Cdd:PRK06590   57 GGRAFSQTLWTWISVGDFDVDFGLRVDGLSATMLVVVTGVSFLVHIYSIGYMAHDEGYRRFFAYLNLFTFSMLMLVLSDN 136
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 137 LFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIFMINLNENTLPLLGL 216
Cdd:PRK06590  137 LLQLFFGWEGVGLCSYLLIGFWYKKPSAGAAAMKAFIVNRVGDVGLALGIFLLFAEFGSLNYDEVFAAAPQFFGLGWSAL 216
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 217 LLAATG-------KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLFTA 289
Cdd:PRK06590  217 TLICLLlfigamgKSAQFPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARMSPLFELSPEALLFVAIVGAVTALFAA 296
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 290 ICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPLT 369
Cdd:PRK06590  297 FIGLVQTDIKRVLAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVT 376
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 370 TSSLIIGSLALTGIPFLTGFYSKDLIIESANTSYtNAWALLITLIATSLTAIYSTRIIFFAllnqprFQASTPIDENNPH 449
Cdd:PRK06590  377 YATFLIGTLALIGIPPFAGFFSKDEILEAAFANG-HINLFVAGLVGAFLTAFYSFRLIFLV------FHGKEKEKIHHPH 449
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1693290054 450 -----LINPIKRLAAGSVFAGFLISNNI---------MPMTTPQMTMPTHLKLSALTVTILGFLLA 501
Cdd:PRK06590  450 espavMTLPLIVLAVLSVFAGALIVPPFlgvlpltteLAHGEAEHHLPVWVALLPLVVALAGIALA 515
NDH_I_L TIGR01974
proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th ...
66-501 6.93e-132

proton-translocating NADH-quinone oxidoreductase, chain L; This model describes the 12th (based on E. coli) structural gene, L, of bacterial NADH dehydrogenase I, as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273905 [Multi-domain]  Cd Length: 609  Bit Score: 399.35  E-value: 6.93e-132
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  66 WHWMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWE 145
Cdd:TIGR01974  65 FPWISVGGFQVDFGLRLDGLSLTMLVVVTGVGSLVHIYSIGYMAHDEGYSRFFAYLNLFTFSMLMLVLADNFLQLFFGWE 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 146 GVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIF-MINLNENTLPLLGLLLAATG-- 222
Cdd:TIGR01974 145 GVGLCSYLLIGFWYKKPSANNAAIKAFVVNRVGDFGLLLGIFLIFWYFGTLNFQEVFaLAPGAFFSALTLICLLLFIGam 224
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 223 -KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLFTAICALTQNDIKKI 301
Cdd:TIGR01974 225 gKSAQLPLHTWLPDAMEGPTPVSALIHAATMVTAGVYLVARTSPLFELSPTALYLVTIIGAITALFAATVALVQNDIKRI 304
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 302 VAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPLTTSSLIIGSLALT 381
Cdd:TIGR01974 305 LAYSTMSQLGYMFLALGVGAYAAAIFHLMTHAFFKALLFLGAGSVIHAMHHEQDIRKMGGLRKKMPVTYITFLIGSLALI 384
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 382 GIPFLTGFYSKDLIIESANTSYTNAWALLITLIATSLTAIYSTRIIFFALLNQPRFQASTPIDENNPHLINPIKRLAAGS 461
Cdd:TIGR01974 385 GFPGFAGFFSKDLILEAAFASGTHSFLFVAGLIGAFLTAFYSFRLIFMVFHGKERHEADAHPHESPLVMLLPLIVLAVGS 464
                         410       420       430       440       450
                  ....*....|....*....|....*....|....*....|....*....|
gi 1693290054 462 VFAGFLISNNIMPMTTPQMTMPTHL----------KLSALTVTILGFLLA 501
Cdd:TIGR01974 465 VFAGFFIVPLFEFLKGVLPTSAEPAlehhhvpaleIWSPTAVAILGILLA 514
ND5 MTH00020
NADH dehydrogenase subunit 5; Reviewed
66-504 1.54e-116

NADH dehydrogenase subunit 5; Reviewed


Pssm-ID: 214400 [Multi-domain]  Cd Length: 610  Bit Score: 359.78  E-value: 1.54e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  66 WHWMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWE 145
Cdd:MTH00020   62 WRWLDSDLLTVYFGLQFDGLVAIMLLVVTTVSTLVHIFSTAYMRGDPHIPRFMSYLSLFTFLMVVLVTSDNYLQLFIGWE 141
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 146 GVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIFMI----NLNENTLPLLGLLLAAT 221
Cdd:MTH00020  142 GVGLCSYLLINFWLTRIEANKAAIKAMLVNRVGDIGLLLAMFLLWDRFGSLDFSSVFNMvvsaPSSDITLICLFLFIGAV 221
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 222 GKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLFTAICALTQNDIKKI 301
Cdd:MTH00020  222 GKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLLIRSSPLFEQAPLALIIVTIVGSLTVFFAATVGLVQNDLKKV 301
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 302 VAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPLTTSSLIIGSLALT 381
Cdd:MTH00020  302 IAYSTCSQLGYMVVACGLSHYSISLFHLMNHAFFKALLFLSAGSVIHALSDEQDMRKMGGLISFLPLTYIFFLIGSLSLM 381
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 382 GIPFLTGFYSKDLIIESANTSYTNAWALLITLIATSLTAIYSTRIIFFALLNQP--RFQASTPIDENNPHLINPIKRLAA 459
Cdd:MTH00020  382 GFPYLTGFYSKDLILELAFGQYYLIFAYWLGCFSALLTAFYSIRLIYLTFLSNTnlKKAVFFHLHEGDWNLLLPLGILAL 461
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....*..
gi 1693290054 460 GSVFAGFLISNNIMP--MTTPQMtMPTHLKLSALTVTILGFLLAMEL 504
Cdd:MTH00020  462 GSIFVGYLAKEMIWSfqITLPPI-VPLSIKLLPVFLSLGGIGLVIIL 507
ND5 MTH00151
NADH dehydrogenase subunit 5; Provisional
40-591 3.33e-116

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214436 [Multi-domain]  Cd Length: 565  Bit Score: 357.23  E-value: 3.33e-116
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  40 IMYALSTSTIPTTLYIWSGQEMVISNWHWMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFK 119
Cdd:MTH00151   10 LLFSYSVFLFPLLGYFGLNGISLIFEWELLSVSSCSFSFELVLDWVSLSFSGVVCLISGCVFLFSSSYMSEDPFLKRFMW 89
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 120 YLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLL--HSNSWe 197
Cdd:MTH00151   90 LVMLFVLSMNLLIFIPSLPSLLLGWDGLGIVSFALV-IYYQNKKSLSAGMLTALTNRIGDVLILLSIALLVLlgHWSIL- 167
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 198 lqqiFMINLNENTLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLA 277
Cdd:MTH00151  168 ----SMWDFKLSGWLGLLLVLAAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFFPFLSSSSGFSSFL 243
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 278 MCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIR 357
Cdd:MTH00151  244 LFISLLTLLMAGISACYENDLKKIIALSTLSQLGVMMFSLGLGMPSLALFHLYTHALFKALLFLCAGSIIHSSSGTQDIR 323
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 358 KMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTSYTNAWALLITLIATSLTAIYSTRIIFFALLNQPRF 437
Cdd:MTH00151  324 LLGSLFLSLPLTSGCLNISSLSLCGAPFLSGFYSKDLILESSLMSPTSLLMVLLMFVGVGLTALYSARLSFCLVWGSMKS 403
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 438 QASTPIDENNPHLINPIKRLAAGSVFAGFLISnNIMPMTTPQMTMPTHLKLSALTVTILGFLLAMeLNQLTHNLQFKTPS 517
Cdd:MTH00151  404 SSLSSKSDEDFYVSLPMLLLSLGALIGGKLLQ-SLFEGFSEEFFLPSYLKLLIGFVILLGLFLSF-GFWDSGFSSSKMVK 481
                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1693290054 518 PLHTFSNlLGFFPTIMHRTPPHLALTTGQNLASTlLDLIWFEKVAPKSLpqLNLLASINISNQKGLIKLYSLSF 591
Cdd:MTH00151  482 LSFFFSS-MWFLSPLSSQPLKSLSLKLSNSSMKS-LDMGWLEILGGQGV--FKANKSFSVLNESWPVKWFNFFI 551
ND5 MTH00210
NADH dehydrogenase subunit 5; Provisional
66-589 1.06e-113

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177253 [Multi-domain]  Cd Length: 616  Bit Score: 352.39  E-value: 1.06e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  66 WHWMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWE 145
Cdd:MTH00210   62 WRWFDSELLTTYFGLQFDSLTSTMLIVITSVSALVHIYSTGYMSGDPHIPRFMSYLSLFTFLMIVLVTSDNYVQLFIGWE 141
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 146 GVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIF-----MINLNENTLPLLGLLLAA 220
Cdd:MTH00210  142 GVGLCSYLLINFWLTRIKANKAAIKAMLINRVGDIGLVLAMIMILKEFGTLEFSTISsllvtNINKESLTIICLLLFIGA 221
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 221 TGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLFTAICALTQNDIKK 300
Cdd:MTH00210  222 VGKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLIIRSGPLFEGSPLALTIVTILGALTAFFAATVGVVQNDLKK 301
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 301 IVAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPLTTSSLIIGSLAL 380
Cdd:MTH00210  302 VIAYSTCSQLGYMVMVCGISNYSTSLFHLMNHAFFKALLFLSAGSVIHAVSDEQDMRKMGGLIKSIPFTYVMILIGSLSL 381
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 381 TGIPFLTGFYSKDLIIESANTSYTNAWALLITLIATSLTAIYSTRIIFFALLNQPRFQAST--PIDENNPHLINPIKRLA 458
Cdd:MTH00210  382 MGFPYLTGFYSKDLILELTYDKYYIAFAYWLGSFSALLTAFYSIRLIYLTFITNTNSKKEVfiGVHESSWNITFPLLLLA 461
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 459 AGSVFAGFL-----ISNNIMPMttpqmtMPTHLKLSALTVTILGFLLAMELNQLTHNLQFKTPS--------PLHTFSNL 525
Cdd:MTH00210  462 FGSIFVGYLgkevvLSNVIPPI------VPNSIKMIPLLFSLLGALLAFVIYNSMVFLIKISRRgvsirlyhVIYTFLNS 535
                         490       500       510       520       530       540
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1693290054 526 LGFFPTIMHRTPPHLALTTGQNLASTLLDLIWFEKVAPKSLPQLNLLASINISN-QKGLIKLYSL 589
Cdd:MTH00210  536 AWQFNYVINHFIVKNIWKFGHLITYRIIDRGLLEIIGPRGISKVLIKLTQKISNlQSGMVFNYAL 600
ND5 MTH00165
NADH dehydrogenase subunit 5; Provisional
61-591 9.39e-112

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214444 [Multi-domain]  Cd Length: 573  Bit Score: 345.97  E-value: 9.39e-112
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  61 MVISNWHWMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQL 140
Cdd:MTH00165   31 SLFIEWELFSLNSSSIVMTFLFDWMSLLFMSFVLFISSMVIYYSKSYMSGDKNINRFIYLVLLFVLSMMLLIISPNLISI 110
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 141 FIGWEGVGIMSFLLIgWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHsNSWEL--QQIFMINLNENTLPLLGLLL 218
Cdd:MTH00165  111 LLGWDGLGLVSYCLV-IYYQNKKSYNAGMLTALSNRIGDVAILLSIAWMMNF-GSWNFifYLDFMKNSFEMLLIGLLIML 188
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 219 AATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLaMCLGAITTLFTAICALTQNDI 298
Cdd:MTH00165  189 AAMTKSAQIPFSSWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFNNLLFSSFFSKFL-LLISLLTMFMAGLGANFEFDL 267
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 299 KKIVAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPLTTSSLIIGSL 378
Cdd:MTH00165  268 KKIIALSTLSQLGLMMSILSLGFPKLAFFHLLTHALFKALLFLCAGSIIHNMSNSQDIRFMGGLSNFMPLTSSCFNISNL 347
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 379 ALTGIPFLTGFYSKDLIIESANTSYTNAWALLITLIATSLTAIYSTRIIFFALLNQPRFQASTPIDENNPHLINPIKRLA 458
Cdd:MTH00165  348 SLCGFPFLSGFYSKDLILEMVSMSNLNFFIFFLFFFSTGLTVSYSFRLIYYSMSGDFNLKSLNNLSDESKFMLKSMILLL 427
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 459 AGSVFAGFLISNNIMPMtTPQMTMPTHLKLSALTVTILGFLLAMELNQ--LTHNLQFKTPSPLHTFSNLLGFFPTIMHRT 536
Cdd:MTH00165  428 FMSIFGGSMLSWLIFPE-PYMICLPFYLKLLTLFVILLGGWLGYELSLmsLSYNLKSLKNYKLSSFLGSMWFMPFLSTYG 506
                         490       500       510       520       530
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1693290054 537 PPHLALTTGQNLaSTLLDLIWFEKVAPKSLP-QLNLLASINISNQKGLIKLYSLSF 591
Cdd:MTH00165  507 ISYYPLNLGSLS-LKSFDQGWSEYFGGQGLYnFLKKLSKLIQWLQNNNLKIYLLSF 561
ND5 MTH00207
NADH dehydrogenase subunit 5; Provisional
33-584 1.79e-99

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 164753 [Multi-domain]  Cd Length: 572  Bit Score: 314.40  E-value: 1.79e-99
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  33 PNYVKTSIMYALSTSTIPTTLYIWSGQEMVISNWHWMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDP 112
Cdd:MTH00207    6 PSSIASYLLWFMSILMFPLSLYLMMCNKTILIEWEIFTISSSPINFTIILDPTGTLFSSTVLFISANVLLFAKTYMQEDK 85
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 113 NINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAVLYNRIGDVGFILAMAWfLLH 192
Cdd:MTH00207   86 FLSRFISLVLLFVLSMNMLIFFPHLMILLLGWDGLGLVSFILV-IYYQNPKSLGAGMITALTNRIGDVMLLLSIGW-TLN 163
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 193 SNSWELqqIFMINLNENTLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNL 272
Cdd:MTH00207  164 QGHWSI--TNMWQTDMNNYIALSIMIAAMTKSAQMPFSSWLPAAMAAPTPVSALVHSSTLVTAGVFLLIRFYPFLSSTYW 241
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 273 VLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNN 352
Cdd:MTH00207  242 FNPALLLTASLTMLMAGLSAMTECDMKKIIALSTLSQLGVMMASLGLGMPKLALFHLITHALFKALLFVCAGSLIHSHHH 321
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 353 EQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTSYTNAWALLITLIATSLTAIYSTRIIFFALL 432
Cdd:MTH00207  322 SQDLRTMGNLTNQMPLTTSCLLIANLALCGSPFLSGFYSKDLILESSLFYPHNSLMILMIFLATALTAAYSTRFTLAVLW 401
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 433 NQPRFQASTPIDENNPHLINPIKRLAAGSVFAGFLISNNIMPMTTPqMTMPTHLKLSALTVTILGFLLAMELNQL-THNL 511
Cdd:MTH00207  402 SPNSSSPYHHLEDEDKSLTTPMLLLTLGAITSGSALNWWLPTPQEE-PILPLQYKLLPLLVVTLGALLAWLFTTPnITKT 480
                         490       500       510       520       530       540       550
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1693290054 512 QFKTPSPL-HTFSNLLGFFPTIMHRTPPHLALTTGQNLASTlLDLIWFEKVAPKSLPQLNLLASINISNQKGLI 584
Cdd:MTH00207  481 PLLINNPLsHFASCLMWFLVPLSSQFIMSTPMNLSHNYLKL-LDQGWLEMLGAQGTFKMFSRSSNNVMKLQKNI 553
ND5 MTH00209
NADH dehydrogenase subunit 5; Provisional
53-517 1.75e-98

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177252 [Multi-domain]  Cd Length: 564  Bit Score: 311.19  E-value: 1.75e-98
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  53 LYIWSGQEMVISNWHWMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILV 132
Cdd:MTH00209   21 VIFMWFQKIVILEWELLSLNSMSISFPLIIDKMSLLFSSVVLLISGSVMWFSTSYMAGEKFKKRFILLVLLFILSMNFLI 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 133 TANNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNsWelqQIFMINLNENTLP 212
Cdd:MTH00209  101 FVPNLITLLLGWDGLGLVSYLLV-IYYQNSKSLSAGMLTALTNRVGDALLILSIAWMLMHGN-W---NIFYLNFNSNLGS 175
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 213 LLGLLLAA--TGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLFTAI 290
Cdd:MTH00209  176 VISVLIVLaaMTKSAQIPFSAWLPAAMAAPTPVSALVHSSTLVTAGVYLLIRFFPSLFSSPFFSMSLLLLGSLTTLMASM 255
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 291 CALTQNDIKKIVAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPLTT 370
Cdd:MTH00209  256 SANVESDLKKIIALSTLSQLGLMMCSLGLNQPELAFFHLITHALFKALLFICAGNIIHSHGHSQDIRMVGNLWYQMPITS 335
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 371 SSLIIGSLALTGIPFLTGFYSKDLIIESANTSYTNAWALLITLIATSLTAIYSTRIIFFALLNQPRFQASTPIDENNPHL 450
Cdd:MTH00209  336 ICLNIANLSLCGIPFLAGFYSKDLILESMLESNMPIMTLILMFLSTSLTAAYSMRLSYFSLWGPNSSKSLNSSFDQNKLN 415
                         410       420       430       440       450       460
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1693290054 451 INPIKRLAAGSVFAGFLISNNIMPMTTPqMTMPTHLKLSALTVTILGFLLAMELNQLTHNLQFKTPS 517
Cdd:MTH00209  416 LKPMLVLTLGSITGGSVMSWVMVPSVNS-VVLPWFLKLLPIMLILFGVLLMYMVLKKNFFLIKGYKV 481
PRK07376 PRK07376
NADH-quinone oxidoreductase subunit L;
57-428 1.05e-89

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236005 [Multi-domain]  Cd Length: 673  Bit Score: 291.54  E-value: 1.05e-89
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  57 SGQEMVISNWHWMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANN 136
Cdd:PRK07376   64 QGHEPYERLFEWASAGDFHLPMGYVIDPLGAVMLVLVTTVALLVMIYSDGYMAHDPGYVRFFAYLSLFSSSMLGLVISPN 143
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 137 LFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIfMINLNENTLPLLGL 216
Cdd:PRK07376  144 LVQIYVFWELVGMCSYLLVGFWYDRKGAADAAQKAFVVNRVGDFGLLLGILGLFWATGSFDFDGI-ADRLSELVSSGAVS 222
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 217 LLAATG-----------KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITT 285
Cdd:PRK07376  223 GWLALLlcilvflgpmaKSAQFPLHVWLPDAMEGPTPISALIHAATMVAAGVFLVARMYPVFEQFPAVMTVIAWTGAITA 302
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 286 LFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNN--------EQDIR 357
Cdd:PRK07376  303 FLGASIALTQNDIKKGLAYSTISQLGYMVMAMGCGAYSAGLFHLMTHAYFKAMLFLGSGSVIHGMEEvvghdpvlAQDMR 382
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1693290054 358 KMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTSYTNAWalLITLIATSLTAIYSTRIIF 428
Cdd:PRK07376  383 LMGGLRKYMPITAITFLIGCLAISGIPPFAGFWSKDEILGAAFEANPALW--FVGFLTAGMTAFYMFRMYF 451
ND5 MTH00032
NADH dehydrogenase subunit 5; Provisional
63-591 4.41e-86

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214407 [Multi-domain]  Cd Length: 669  Bit Score: 281.85  E-value: 4.41e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  63 ISNWHWMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFI 142
Cdd:MTH00032   59 IELYKWIESEIFITHIGLLYDTLSVTMLLVISSISTLVHIYSTSYMSDDPHVPRFLCYLSLFTFLMMVLVTSDNYLQLFI 138
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 143 GWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAW---------FLLHSNSWELQQIFMINLNENTLPL 213
Cdd:MTH00032  139 GWEGVGVCSYLLVAFWTTRIQANKAAIKAIVVNRVGDVGVILGMVLiyktigsldFLTFNGGSVGSGIMDRGYYGGGAYE 218
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 214 LGLLLAATG----------KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAI 283
Cdd:MTH00032  219 SPLAPFAIIgillligcigKSAQLGLHTWLPDAMEGPTPVSALIHAATMVTAGVFLMIRSFPLFEKAPLTLLIITIFGAL 298
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 284 TTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPY-LAFLHICTHAFFKAMLFLCSGSIIHNLN-NEQDIRKMGG 361
Cdd:MTH00032  299 TAFFAATVGLVQNDLKKVIAYSTCSQLGYMVLIIGIEGSHnVGLFHLVNHAFFKALLFLSAGSVIHSTTvDEQDMRKMGG 378
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 362 LFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIE------------------------------------SANTSYTN 405
Cdd:MTH00032  379 LIHSIPFTYTMMLIGSFSIMGLPYLTGFYSKDLILEltysgrnmgipfgssllkiqgdigikkddrgsiggpEGYPSRGS 458
                         410       420       430       440       450       460       470       480
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 406 AWALLITLIATSLTAIYSTRIIFFALLNQPRFQA----STPIDENNPHLINPIKRLAAGSVFAGFLISNNIM-----PMT 476
Cdd:MTH00032  459 AFAFWLGTVAALLTAFYSIRLVYITFIISPNSPKesliSSHINIVDKRVLTVLSLLCFGAIFVGYLIQDILIgdiehPIV 538
                         490       500       510       520       530       540       550       560
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 477 TPQM-TMPTHLKLSALTVTILGfLLAMELNQLTHNLQFKTPSPLHTFSNLLGFFPTIMHRTPPHLAL---TTGQNLASTL 552
Cdd:MTH00032  539 PPLIkVMPTLMGLFGMGLCLWA-QKGTREGELYWGFDPIGPSFLLSIYSFLGGAWQGDHLINKLVAIplfSFGHWGIYKT 617
                         570       580       590       600
                  ....*....|....*....|....*....|....*....|
gi 1693290054 553 LDLIWFEKVAPKSLPQLNLLASINISN-QKGLIKLYSLSF 591
Cdd:MTH00032  618 LDRGWLELFGPQGISTIALRVSQFISNlQSGVISRYALVL 657
ndhF CHL00025
NADH dehydrogenase subunit 5
107-428 2.19e-72

NADH dehydrogenase subunit 5


Pssm-ID: 214338 [Multi-domain]  Cd Length: 741  Bit Score: 246.73  E-value: 2.19e-72
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 107 YMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGF---I 183
Cdd:CHL00025  114 YMSHDQGYLRFFAYLSFFNTSMLGLVTSSNLIQIYIFWELVGMCSYLLIGFWFTRPIAANACQKAFVTNRVGDFGLllgI 193
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 184 LAMAWFllhSNSWELQQIFMI--NLNENTLPLLGLLLAATG--------KSAQFGLHPWLPSAMEGPTPVSALLHSSTMV 253
Cdd:CHL00025  194 LGFYWI---TGSFEFRDLFEIfnNLIYNNEVNLLFATLCAFllflgpvaKSAQFPLHVWLPDAMEGPTPISALIHAATMV 270
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 254 VAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPYLAFLHICTHA 333
Cdd:CHL00025  271 AAGIFLVARLLPLFIVIPYIMNLISLIGIITALLGATLALAQKDIKRGLAYSTMSQLGYMMLALGIGSYRAALFHLITHA 350
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 334 FFKAMLFLCSGSIIHNL--------NNEQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLII-ESANTSYT 404
Cdd:CHL00025  351 YSKALLFLGSGSVIHSMepivgyspDKSQNMVLMGGLRKYMPITKTTFLLGTLSLCGIPPLACFWSKDEILnDSWLYSPI 430
                         330       340
                  ....*....|....*....|....
gi 1693290054 405 NAWallITLIATSLTAIYSTRIIF 428
Cdd:CHL00025  431 FAI---IAWSTAGLTAFYMFRIYL 451
PRK12647 PRK12647
putative monovalent cation/H+ antiporter subunit A; Reviewed
77-415 1.62e-60

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237156 [Multi-domain]  Cd Length: 761  Bit Score: 214.78  E-value: 1.62e-60
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  77 TLSFKLDYFSLIFipvALFVT---WSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFL 153
Cdd:PRK12647   57 NLSFLLDGLSLTF---ALLITgigTLIVLYAGGYLKGHPDLGRFYSYILLFMASMLGLVLSDNLITLFVFWELTSITSFL 133
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 154 LIGWWYGRTDANTAALQAVLYNRIGdvGFILaMAWFLLHSN---SWELQQIFMIN--LNENTLPLLGLLLAAT---GKSA 225
Cdd:PRK12647  134 LIGFNHEREAARRAALQALLVTGGG--GLAL-LAGLILLGNvtgTYSLSELLASGdvIREHPLYLAILLLVLGgafTKSA 210
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 226 QFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFS 305
Cdd:PRK12647  211 QFPFHFWLPNAMEAPTPVSAYLHSATMVKAGIYLLARLNPVLGGTPLWQTILPLFGGLTMLTGALLAVRQTDLKLILAYS 290
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 306 TSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFLCSGSIIHNLNNeQDIRKMGGLFKALPLTTSSLIIGSLALTG 382
Cdd:PRK12647  291 TVSALGTLVMLLGLGSELAikaAVLFLVAHSLYKGALFMVAGIIDHETGT-RDITKLGGLRRAMPITAAAALLAALSMAG 369
                         330       340       350
                  ....*....|....*....|....*....|...
gi 1693290054 383 IPFLTGFYSKDLIIESanTSYTNAWALLITLIA 415
Cdd:PRK12647  370 LPPLFGFLAKELIYEA--LLEAPLWSLILTVAA 400
PRK12648 PRK12648
putative monovalent cation/H+ antiporter subunit A; Reviewed
78-436 2.61e-57

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237157 [Multi-domain]  Cd Length: 948  Bit Score: 207.73  E-value: 2.61e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  78 LSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGW 157
Cdd:PRK12648   70 LSLRLDGLAWLFALLILGIGLLVVLYARYYLSPADPVPRFFSFLLLFMGAMLGIVLSGNLILLVVFWELTSLSSFLLIGY 149
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 158 WYGRTDANTAALQAVLYNRIGdvGFILaMAWFLLHSN---SWELQQIF----MINLNENTLPLLGLLLA-ATGKSAQFGL 229
Cdd:PRK12648  150 WHHRADARRGARMALTVTGAG--GLAL-LAGVLLLGHivgSYDLDVVLaagdLIRAHPLYPPALVLILLgAFTKSAQFPF 226
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 230 HPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQ 309
Cdd:PRK12648  227 HFWLPHAMAAPTPVSAYLHSATMVKAGVFLLARLWPVLAGTEEWFWIVGGAGLITLLLGAYFALFQHDLKGLLAYSTISH 306
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 310 LGLMMVTIGINQPY---LAFLHICTHAFFKAMLFLCSGSIIHnlnnE---QDIRKMGGLFKALPLTTSSLIIGSLALTGI 383
Cdd:PRK12648  307 LGLITLLLGLGSPLaavAAIFHIINHATFKASLFMAAGIIDH----EtgtRDMRRLSGLRRLMPITATLAMVAAAAMAGV 382
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1693290054 384 PFLTGFYSKDLII-ESANTSYTNAWALLITLIAT---SLTAIYSTRIIFFALLNQPR 436
Cdd:PRK12648  383 PLLNGFLSKEMFFaETLDTHLLGSLDWLLPVAATlagAFSVAYSLRFIHDVFFGPPP 439
PRK12650 PRK12650
DUF4040 family protein;
65-469 4.14e-57

DUF4040 family protein;


Pssm-ID: 237158 [Multi-domain]  Cd Length: 962  Bit Score: 207.20  E-value: 4.14e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  65 NWH--WMTT---QTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQ 139
Cdd:PRK12650   55 TWSvtWIPDllgNGVDVNLALRADALSLFFALLALVIGAVVFIYSARYLPRKKGNTSFYLLMTAFMAAMLLLVLADDVVV 134
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 140 LFIGWEGVGIMSFLLIGwwYGRTDANTAALQAVLYNRIGDVGFILAMAWF-----------LLHSNSWELQQIFMinlne 208
Cdd:PRK12650  135 LFVAWELVSLASFFLIA--RSGSGGEAGSIRTLILTFFGGLTLLAAVAIAatqtgttslsgILHSDVWAEKPGLT----- 207
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 209 nTLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLFT 288
Cdd:PRK12650  208 -TVVAVLIAVAAFTKSAQFPFHFWLPEAMAAITPVSAFLHAAAVVKAGIYLLLRFSPVFHDVAVWNWLLIIVGMITALMG 286
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 289 AICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFLCSGSIIHNLNNeQDIRKMGGLFKA 365
Cdd:PRK12650  287 AVFAVQKTDLKKLTAYSTVSQLGWIVATIGVGTPFaltAAVVHTLAHALFKSSLFMLIGVVDHQAGT-RDIRRLGSLWRR 365
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 366 LPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTSYTNAWALLITLIATSLTAI----YSTRIIFFALLNQPRFQAST 441
Cdd:PRK12650  366 MPFTFVSVTIAALSMAAVPPLFGFVSKEGMLTAFLEAPGGNAGVVLLLVGAALGAVftfaYSARLVLGAFVDGPRDMSHV 445
                         410       420
                  ....*....|....*....|....*...
gi 1693290054 442 PidENNPHLINPIKRLAAGSVFAGFLIS 469
Cdd:PRK12650  446 K--EAPVSLWLPAALPGALSLPLGLVPG 471
HyfB COG0651
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ...
76-430 4.93e-57

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 440416 [Multi-domain]  Cd Length: 430  Bit Score: 198.06  E-value: 4.93e-57
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  76 FTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLI 155
Cdd:COG0651    68 FGIVLVADRLSALFLLLTALVALAVLLYSIGYMRHERRGRRFYPLFLLLLAGMNGAFLTGDLFNLFVFFEVMLLASYGLV 147
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 156 GwWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIFMINLNENTLPLLGLLLAAT----GKSAQFGLHP 231
Cdd:COG0651   148 A-LGGTKEALRAGLKYLILNLVGSALFLLGVGLLYGATGTLNMADLAARLAELDPGLLLAAFALLLvgfgIKAALFPLHF 226
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 232 WLPSAM-EGPTPVSALLhSSTMVVAGIFLLVRFYPLL---QDNNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTS 307
Cdd:COG0651   227 WLPDAYpAAPSPVSALL-SGLLTKVGVYAILRVLTLLfgaDPALFLGTLLLVLGLLTMLVGALGALAQRDLKRLLAYSSV 305
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 308 SQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFLCSGSIIHNLnNEQDIRKMGGLFKALPLTTSSLIIGSLALTGIP 384
Cdd:COG0651   306 SQIGYILLGLGLGTPLGlagALFHLLNHALAKALLFLAAGAIERAT-GTRDLDKLGGLGKRMPLTAAAFLIGALALAGLP 384
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 1693290054 385 FLTGFYSKDLIIESANTSytNAWALLITLIATS-LTAIYSTRIIFFA 430
Cdd:COG0651   385 PLSGFVSKWLLLQAALEA--GAWLLAAVLLLSSlLTLAYFVRIFGRA 429
ND5 MTH00095
NADH dehydrogenase subunit 5; Provisional
76-433 1.07e-56

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 177158 [Multi-domain]  Cd Length: 527  Bit Score: 199.76  E-value: 1.07e-56
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  76 FTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLI 155
Cdd:MTH00095   37 LSLKFNFYFNSLLFSLILLLVTLSVLVFSSYYMNGELNFNYFYFVLLIFVGSMFMLNFSNSVFTMLLSWDLLGISSFFLV 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 156 gWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIFMinlnenTLPLLGLLLAATGKSAQFGLHPWLPS 235
Cdd:MTH00095  117 -LFYNNWDSNSGAMNTALTNRIGDFFIFLFFSGFIFSSYYFFSFSFFS------SSMILMLLLTSFTKSAQFPFSSWLPK 189
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 236 AMEGPTPVSALLHSSTMVVAGIFLLVRF-YPLLqdNNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMM 314
Cdd:MTH00095  190 AMSAPTPVSSLVHSSTLVTAGLILLMNFsYLIL--NMNVMKIMLLIGLFTMFFSSLSALVEEDMKKVVALSTLSQMGFSM 267
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 315 VTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDL 394
Cdd:MTH00095  268 LTFGSGLSFVSFIHLLSHALFKSCLFMQVGYLIHSNFGQQDGRNYSNNGNLPMFIQLQLLVTLFCLCGLMFTSGMVSKEL 347
                         330       340       350
                  ....*....|....*....|....*....|....*....
gi 1693290054 395 IIESANTSYTNAWALLITLIATSLTAIYSTRIIFFALLN 433
Cdd:MTH00095  348 ILELFFFNNYMIFFSLMFFFSVFLTFGYSYRLWKSFFLS 386
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
134-416 2.32e-55

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 189.45  E-value: 2.32e-55
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 134 ANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIFMI-----NLNE 208
Cdd:pfam00361   1 ANDLLLMYLGWEAVLLPSYLLIGYWGKSPRSSEAGMKYFLLTLLGSSILLFGISLMYNYTGTLSFDELSKAltgglNSSG 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 209 NTLPLLGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLVRFYPLLQ-DNNLVLTLAMCLGAITTL 286
Cdd:pfam00361  81 LLLLFLLILVGFLFKSAQVPFHTWLPDAyEGAPTPVSALL-AATLVKAGGYGLIRRSLLYLpSSPFIQQILLILAIISML 159
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 287 FTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLF 363
Cdd:pfam00361 160 LGSLAALVQTDIKRLLAYSSISHMGYMLIALGAGTIYgiqAAIFHLLTHGLFSAGLFLCAGSVIYRRVHTRNIRDYGGLA 239
                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1693290054 364 KALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTSYTNaWALLITLIAT 416
Cdd:pfam00361 240 KTMPILALVFLVAMLSLAGLPPTAGFLGKFLILAAAVAASWI-FLVLAGVVGS 291
2a6301s01 TIGR00940
Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial ...
68-436 9.05e-54

Tmonovalent cation:proton antiporter; This family of proteins constists of bacterial multicomponent K+:H+ and Na+:H+ antiporters. The best characterized systems are the PhaABCDEFG system of Rhizobium meliloti which functions in pH adaptation and as a K+ efflux system and the MnhABCDEFG system of Staphylococcus aureus which functions as a Na+:H+ antiporter. [Transport and binding proteins, Cations and iron carrying compounds]


Pssm-ID: 273353 [Multi-domain]  Cd Length: 793  Bit Score: 196.22  E-value: 9.05e-54
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  68 WMTTQTMKFTLsfKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWEGV 147
Cdd:TIGR00940  61 WVPELGLNFTL--YMDGLALLFSLLITGIGVLVVLYSIYYLSKEEPLPNFYAYLLAFMGAMLGVVLSDNLILLYVFWELT 138
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 148 GIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIF-----MINLNENTLPLLGLLLAATG 222
Cdd:TIGR00940 139 SIVSFLLISYWHHRAHSRYGAQKSLTITVFGGLAMLGGLILLGKITGSFSIDAVIasadaIRNSPLFGTAMVLVLLGAFT 218
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 223 KSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLFTAICALTQNDIKKIV 302
Cdd:TIGR00940 219 KSAQFPFHIWLPDAMEAPTPVSAYLHSATMVKAGLYLLARFTPVFAGTEAWFWIVGLAGLITLLWGSYFAIFQQDLKGIL 298
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 303 AFSTSSQLGLMMVTIGINQPYL----------------AFLHICTHAFFKAMLFLCSGSIIHNlNNEQDIRKMGGLFKAL 366
Cdd:TIGR00940 299 AFSTISQLGLIMVLLGLGSPSYhyqgddskiyalaavaAVFHLINHATFKGSLFMAAGIIDHE-TGTRDIRKLGGLFHIM 377
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1693290054 367 PLTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTSY------TNAWALL---ITLIATSLTAIYSTRIIFFALLNQPR 436
Cdd:TIGR00940 378 PITFTLAMIASAAMAGVPPFNGFLSKEMFFAEAITAHlvnpfdTVTLGYLfpyVATVASVFTFVYSLRFIHGVFFGRPK 456
PRK12646 PRK12646
DUF4040 family protein;
68-437 5.49e-53

DUF4040 family protein;


Pssm-ID: 183646 [Multi-domain]  Cd Length: 800  Bit Score: 194.20  E-value: 5.49e-53
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  68 WMTTqtMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYM-HSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWEG 146
Cdd:PRK12646   64 WMKT--LDINLDLRLDGLSLMFSLIISLIGIAVFFYATQYLsSRKDNLPRFYFYLTLFMFSMIGIVLSDNTILMYVFWEL 141
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 147 VGIMSFLLIGWWYGRTDANTAALQAVLYNRIGD----VGFIL--------AMAWFLLHSNSWELQQIFMinlnentLPLL 214
Cdd:PRK12646  142 TSVSSFLLISYWYNNGDSQFGAIQSFMITVFGGlallVGFIMlyimtgtnNITEILGQADHIKNHGLFI-------PMIF 214
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 215 GLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLFTAICALT 294
Cdd:PRK12646  215 MFLLGAFTKSAQFPFHIWLPRAMAAPTPVSAYLHSATMVKAGIFLLFRFTPLLGLSNMYIYIVTFVGLITMLFGSITALK 294
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 295 QNDIKKIVAFSTSSQLGLMMVTIGINQPYL-----------------AFLHICTHAFFKAMLFLCSGSIIHNlNNEQDIR 357
Cdd:PRK12646  295 QWDLKGILAYSTISQLGMIMAMVGIGGGYAqhqqdaiasiyvfvlfaALFHLMNHAIFKCALFMGVGIIDHE-AGTRDIR 373
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 358 KMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIES-ANTSYTNAWALLIT-------LIATSLTAIYSTRII-- 427
Cdd:PRK12646  374 ILSGMRQLFPKMNLVMTIAALSMAGVPFLNGFLSKEMFLDAlTQTGQLSQFSLISMiiivfigVIASIFTFTYALYMVke 453
                         410
                  ....*....|.
gi 1693290054 428 -FFALLNQPRF 437
Cdd:PRK12646  454 vFWGKYDSKVF 464
PRK12644 PRK12644
putative monovalent cation/H+ antiporter subunit A; Reviewed
66-467 2.18e-51

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237154 [Multi-domain]  Cd Length: 965  Bit Score: 190.52  E-value: 2.18e-51
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  66 WHWMttQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSD-PNINRFFKYLLLFLITMIILVTANNLFQLFIGW 144
Cdd:PRK12644   58 VPWI--PSLGLDLAFRLDALAALMSLLVLGVGALVLLYCARYFDDDePRLGRFAAELVAFAGAMFGLVTSDNLLLLYVFW 135
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 145 EGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGD----VGFILamawfLLHS-NSWELQQIfminLNENTLPLLGLLLA 219
Cdd:PRK12644  136 ELTTVLSFLLIGHYAERAASRRAALQALLVTTAGGlamlVGIII-----LGQAaGTYRLSEL----LADPPTGPAVSVAV 206
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 220 A------TGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLFTAICAL 293
Cdd:PRK12644  207 VlilvgaLSKSAIVPFHFWLPGAMAAPTPVSAYLHAAAMVKAGIYLVARLAPGFADVPVWRPTVLVLGLATMLLGGWRAL 286
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 294 TQNDIKKIVAFSTSSQLGLMMVTIGINQP--YLAFLH-ICTHAFFKAMLFLCSGSIIHNlNNEQDIRKMGGLFKALPLTT 370
Cdd:PRK12644  287 RQHDLKLILAYGTVSQLGFLTVLVGIGTRdaALAGLAmLLAHALFKAALFLVVGIIDHS-TGTRDIRKLSGLGRRQPVLA 365
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 371 SSLIIGSLALTGIPFLTGFYSKDLIIES---ANTSYTNAWALLITLIATS-LTAIYSTRIIFFALLNQPRFQASTPIDEN 446
Cdd:PRK12644  366 VVAALAAASMAGLPPLLGFVAKEAALEAvlhDGALGPAGPVVLAGIVLGSiLTVAYSLRFLWGAFARKPGAFPSVAVTEM 445
                         410       420
                  ....*....|....*....|....
gi 1693290054 447 N---PHLINPIKRLAAGSVFAGFL 467
Cdd:PRK12644  446 HrpsPLFLAPPAVLAVLGLVLGLL 469
PRK12649 PRK12649
putative monovalent cation/H+ antiporter subunit A; Reviewed
78-496 7.44e-49

putative monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 183649 [Multi-domain]  Cd Length: 789  Bit Score: 182.34  E-value: 7.44e-49
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  78 LSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGW 157
Cdd:PRK12649   74 FSIYADGLAVLIGLIASGIGVIIMSYSNGYMSHKEDLPRYYQYLLLFMGSMIGMVFSGNTIQLFIFWELTSITSFMLIGY 153
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 158 WYGRTDANTAALQAVLYNRIGdvGFILAMAWFLLHS--NSWELQQIF----MINLNENTLPLLGLLLAAT----GKSAQF 227
Cdd:PRK12649  154 WRHRPESVYGATKSLLITAGG--GLFMFAGFLLLHVitGTYDIATILqdseLIENIKGHPLFLITLILIFigaaAKSAQG 231
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 228 GLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTS 307
Cdd:PRK12649  232 PFYIWLPNAMEAPTPVSAFLHSATMVKAGVYLVARIHPIFSGTEAWFILVSGTGMITMVLAGFLAFRQTDIKAILAYSTI 311
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 308 SQLGLMMVTIGI---NQPYLAF----LHICTHAFFKAMLFLCSGSIIHNLNNeQDIRKMGGLFKALPLTTSSLIIGSLAL 380
Cdd:PRK12649  312 SQLAYLMTMYGYttyHEPGLGVaaatFHLLNHATFKACLFLVAGIVAHEAAT-RDIRKLGGLRKEMPITFIVASIAALAM 390
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 381 TGIPFLTGFYSKDLIIESA---NTSYTNAWALLITLIATS---LTAIYSTRIIFFALLNQPRfqastpiDENNPHLIN-- 452
Cdd:PRK12649  391 AGIPPLNGFLSKEMFYETSvemGALIGGPFTIIIPAVAVLggvFTFAYSIKLIDGIFLGERT-------HDHLPHHIHea 463
                         410       420       430       440
                  ....*....|....*....|....*....|....*....|....
gi 1693290054 453 PIKRLAAGSVFAGFLISNNIMPmttpqmTMPTHLKLSALTVTIL 496
Cdd:PRK12649  464 PYVMLIPAAFLAGLVILFGLVP------SIPIHNIIEPATSGIV 501
PRK12645 PRK12645
monovalent cation/H+ antiporter subunit A; Reviewed
47-428 4.47e-48

monovalent cation/H+ antiporter subunit A; Reviewed


Pssm-ID: 237155 [Multi-domain]  Cd Length: 800  Bit Score: 180.12  E-value: 4.47e-48
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  47 STIPTTlyiwSGQEMVISNWHWMTTQTMKFTLsfKLDYFSLIFipvALFVTWS---IMEFSMWYMHSDP-NINRFFKYLL 122
Cdd:PRK12645   47 SLIPTT----MSGNTVMKTLPWIPSLGINFTL--YVDGLSLLF---ALLITGIgslVVLYSIYYLSKKKeQLGNFYVYLL 117
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 123 LFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDV----GFILamawFLLHSNSWEL 198
Cdd:PRK12645  118 LFMGAMLGVVLSDNLIVLYLFWELTSISSFLLISYWYEREASRYGAQKSMLITVFGGLsmlgGFIL----LYIMTGSFSI 193
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 199 QQIF--MINLNENTLPLLGLLLAAT---GKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLV 273
Cdd:PRK12645  194 REMIanADEIQNSPLFIPAMILILLgafTKSAQFPFYIWLPDAMEAPTPVSAYLHSATMVKAGIYLVARFTPIFAGSQVW 273
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 274 LTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGI-----------NQPYL-----AFLHICTHAFFKA 337
Cdd:PRK12645  274 FWTVTLVGLITLFWGSLNAVKQTDLKGILAFSTVSQLGLIMSLLGIgaaslhyqgddSKIYAaaitaAIFHLINHATFKG 353
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 338 MLFLCSGSIIHNLNNeQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIES------ANTSYTNAWALLI 411
Cdd:PRK12645  354 SLFMIVGIVDHETGT-RDIRKLGGLMTIMPITFTIALIGALSMAGLPPFNGFLSKEMFFESmlnateANLFSLDTWGVLF 432
                         410       420
                  ....*....|....*....|
gi 1693290054 412 TLIA---TSLTAIYSTRIIF 428
Cdd:PRK12645  433 PVIAwvaSVFTFVYSIIFIF 452
PRK06525 PRK06525
hydrogenase 4 subunit D; Validated
80-423 2.36e-46

hydrogenase 4 subunit D; Validated


Pssm-ID: 180606 [Multi-domain]  Cd Length: 479  Bit Score: 170.15  E-value: 2.36e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  80 FKLDYFSLIFIPVALFVTWSIMEFSMWYMH-------SDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSF 152
Cdd:PRK06525   71 LVIDPVSVLIGFVVVLLGLLVTLYSTGYMSpgnrehpVHEGTGRYYAFLLLFIGAMAGLVYSSTLLGLLLFFEITGLCSW 150
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 153 LLIGWwYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIFMINLNENTLPLLGLLLAATGKSAQFGLHPW 232
Cdd:PRK06525  151 ALISY-YQSPKALRSALKALLITHIGSLGLYLAAATLFLQTGTFALSALSGLHGSLKYLVFLGILFAAWGKSAQLPFYSW 229
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 233 LPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLFTAICA-LTQNDIKKIVAFSTSSQLG 311
Cdd:PRK06525  230 LPDAMEAPTPASAYLHAASMVKVGVYIFARAIQSMGPIPHVIGYVGAVMAIVTLLYGFLMyLPQQDMKRLLAYSTITQLG 309
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 312 LMMVTI--GINQPYLAF----LHICTHAFFKAMLFLCSGSIIHNLNNeQDIRKMGGLFKALPLTTSSLIIGSLALTGIPF 385
Cdd:PRK06525  310 YMFFGLslAILGSRLALegsiAYIFNHAFAKSLFFLVAGALSYSCGT-RLLPRLRGVLKKLPLVGVGFCVAALAITGVPP 388
                         330       340       350
                  ....*....|....*....|....*....|....*...
gi 1693290054 386 LTGFYSKDLIIESANTSYTNAWALLITLIATSLTAIYS 423
Cdd:PRK06525  389 FNGFFSKFPIFAAGFELSVEYWILLPAMVLLLIESVAS 426
PRK07390 PRK07390
NAD(P)H-quinone oxidoreductase subunit F; Validated
55-435 2.62e-46

NAD(P)H-quinone oxidoreductase subunit F; Validated


Pssm-ID: 236008 [Multi-domain]  Cd Length: 613  Bit Score: 172.79  E-value: 2.62e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  55 IWsGQEMVISNWHWMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTA 134
Cdd:PRK07390   61 IW-NQPPQQLSFPWLQVADLDLSLSLEISPVTLGALELITGLSLLAQIYALGYLEKDWGLARFFALLGFFEAAMSGLALS 139
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 135 NNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIFMINLNENTLPLL 214
Cdd:PRK07390  140 DSLFFSYVLLEILTLSTYLLVGFWYAQPLVVTAARDAFLTKRVGDLLLLMGVVALSPLAGTLNFSDLAAWAATANLDPLT 219
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 215 GLLLAATG------KSAQFGLHPWLPSAMEGPTPVSaLLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLFT 288
Cdd:PRK07390  220 ATLLGLALiagptgKCAQFPLHLWLDEAMEGPNPAS-ILRNSVVVATGAWVLIKLQPVLALSPVALTVLIVIGTVTAIGA 298
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 289 AICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNlNNEQDIRKMGGLFKALPL 368
Cdd:PRK07390  299 SLVAIAQIDIKRALSYSTSAYLGLVFIAVGLQQPDIALLLLLTHAIAKALLFMSVGSIILT-TITQDLTELGGLWSRMPA 377
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1693290054 369 TTSSLIIGSLALTGIPFLTGFYSkdlIIESANTSYTNAWALLITLIATS-LTAIYSTRIIFFALLNQP 435
Cdd:PRK07390  378 TTLAFLVGSAGLVALLPLGGFWA---LLRLADGLWAVSPWLVGVLLLVNaLTAFNLTRVFRLVFLGKP 442
NADH5_C pfam06455
NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of ...
422-591 3.99e-42

NADH dehydrogenase subunit 5 C-terminus; This family represents the C-terminal region of several NADH dehydrogenase subunit 5 proteins and is found in conjunction with pfam00361 and pfam00662.


Pssm-ID: 368917 [Multi-domain]  Cd Length: 181  Bit Score: 150.01  E-value: 3.99e-42
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 422 YSTRIIFFALLNQPRFQASTPIDENNPHLINPIKRLAAGSVFAGFLISNNImPMTTPQMTMPTHLKLSALTVTILGFLLA 501
Cdd:pfam06455   1 YSFRLIYYVMTGSPRFSSLSPINENNPIMINPIKRLAIGSIIGGSLLSWLI-FPKPPMMTMPLYLKLLALLVTILGLLLG 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 502 MELNQLTHNLQFKTPS-PLHTFSNLLGFFPTIMHRTPPHLALTTGQNLAsTLLDLIWFEKVAPKSLPQLNLLASINISN- 579
Cdd:pfam06455  80 LELSNLSNKQLKKSLNfNLHSFSGSMWFFPNLSHRLIPKLSLKLGQKLA-KQIDQGWSEKFGPQGIAKTLMTLSKIIQNs 158
                         170
                  ....*....|..
gi 1693290054 580 QKGLIKLYSLSF 591
Cdd:pfam06455 159 QKGLIKIYLLSF 170
PRK08375 PRK08375
putative monovalent cation/H+ antiporter subunit D; Reviewed
80-466 1.72e-37

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236251 [Multi-domain]  Cd Length: 487  Bit Score: 145.41  E-value: 1.72e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  80 FKLDYFSLIFIPVALFVTWsimeFSMWY-MHSDPNINRFFKYLLLFLIT--MIILVTANnLFQLFIGWEGVGIMSFLLIG 156
Cdd:PRK08375   73 LRADSLSALFLLVTSILAI----AALLYaIGYGEHRQTRFYALFLLLLAglLGALLTAD-LFNLFVFLEIMSLSSYALVA 147
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 157 wwYGRT-DANTAALQAVLYNRIGD------VGFILAMAWFLlhsNSWELQQIFMINlNENTLPLLGLLLAATGKSAQFGL 229
Cdd:PRK08375  148 --MGGDrRALAAARKYLIVGLIGStflligVGLLYGVTGTL---NMADLAGALAEN-PTVVTAFGFVLLALALKAAVFPL 221
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 230 HPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFY-----PLLQDNNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAF 304
Cdd:PRK08375  222 HTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIYftvfgGDFRFALGLGWLLAVLALLSMLVGSLAALGQDDVKRVLAY 301
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 305 STSSQLGLMMVTIGINQP---YLAFLHICTHAFFKAMLFLCSGSIIHNLNNeQDIRKMGGLFKALPLTTSSLIIGSLALT 381
Cdd:PRK08375  302 STVSQMGYILLGLALLTPlalAAGLLHLLHHALMKGALFLAAGAIEVTYGT-RRLSELSGLGRRMPLTAAAFAVASLSLI 380
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 382 GIPFLTGFYSKDLIIESANtsYTNAWALLITLIATSL-TAIYSTRIIFFALLNQPRFQASTPIDENNPHLINPIKRLAAG 460
Cdd:PRK08375  381 GVPPTSGFVSKWYLVVGAV--EAGQWLVLAVLLASSLlALLYFLRIWYRAFFGPPPPGSEAPKQEAPLGMLAPSLALALL 458

                  ....*.
gi 1693290054 461 SVFAGF 466
Cdd:PRK08375  459 SLLLGI 464
PRK12667 PRK12667
putative monovalent cation/H+ antiporter subunit D; Reviewed
75-436 5.93e-36

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237167 [Multi-domain]  Cd Length: 520  Bit Score: 141.65  E-value: 5.93e-36
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  75 KFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLL 154
Cdd:PRK12667   73 PIGIVYEVDLLGALLGLLTALVMFLILIYSYWYLEHESGPEWYYTLLLGLEAGMLGILLTGDAFNLFVMLEVLSISAYGL 152
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 155 IGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWF----------LLHSNSWELQQIFMINLNENTLPLLGLLLAATG-- 222
Cdd:PRK12667  153 VAYYRDRGDAVEAAIKYALIGAVGTTLYFLALAFLyatfgtlnmaDLSAKIRGLSFPLTGGLAGNPPLALGVALALALwa 232
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 223 ---KSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLVRFYPLLQDNNLVLT--------LAMCLGAITTLFTAI 290
Cdd:PRK12667  233 ftiKAAIFPNHFWLPDAHpAAPSPVSAML-SGLVVNVGAYAIIRFLYTIFGISPSLIdfraalspILIILGAVSAIIGAL 311
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 291 CALTQNDIKKIVAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFLCSGSIIHNLNNeQDIRKMGGLFKALP 367
Cdd:PRK12667  312 MMVVQKDVKRLLAYSTISHMGYIFMGIGIGTQLGlaaALFHIINHAIAKSLLFLASGVFIHAAGT-RDIDELAGLGRKMP 390
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1693290054 368 LTTSSLIIGSLALTGIPFLTGFYSKdLIIESANTSYTNAWALLITLIATSLTAIYSTRIIFFALLNQPR 436
Cdd:PRK12667  391 IASFAFLIGALSLVGIPPLNGFFSK-LLLFNALLESGFYLPALVLLIASAISLVGYFRAWYSLFFGKPK 458
PRK08168 PRK08168
NADH-quinone oxidoreductase subunit L;
98-347 5.64e-31

NADH-quinone oxidoreductase subunit L;


Pssm-ID: 236171 [Multi-domain]  Cd Length: 516  Bit Score: 127.12  E-value: 5.64e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  98 WSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRI 177
Cdd:PRK08168   83 WVIGRFSHRYLQGEPGQRRYVRALAGVLAAVHLLVLSDHLLVLIAAWAAISLALHRLLCFYPDRPFARLAAHKKFIADRL 162
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 178 GDVGFILAMAWFLLHSNSWELQQIfMINLNENTLPLLGLL------LAATGKSAQFGLHPWLPSAMEGPTPVSALLHSST 251
Cdd:PRK08168  163 AELLLLAAAALAYLEVGSLSLSAL-WAHLAAQGASPSLQAaalllvLAVILKTAQLPVHGWLIQVMEAPTPVSALLHAGV 241
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 252 MVVAGiFLLVRFYPLLQDNNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPYLAFLHICT 331
Cdd:PRK08168  242 VNLGG-FVLIRFAPLLEQAPPARWLLVLVGLATAVLAGLVMLTRISIKVRLAWSTVAQMGFMLLECGLGLYELALLHLVA 320
                         250
                  ....*....|....*.
gi 1693290054 332 HAFFKAMLFLCSGSII 347
Cdd:PRK08168  321 HSLYKAHAFLSASEAV 336
PRK07234 PRK07234
putative monovalent cation/H+ antiporter subunit D; Reviewed
76-442 1.61e-30

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235978 [Multi-domain]  Cd Length: 470  Bit Score: 125.06  E-value: 1.61e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  76 FTLSFKLDYFSLIFIPVALFVtWSIMEFSMWymhsDPNINRFFKYLLLFLITMIILV-TANNLFQLFIGWEGVGIMSFLL 154
Cdd:PRK07234   59 FGVTLRADALSGYFILTNALV-TLAVIFYCW----ESAKTRFFYAQLLILHGSVNAAfVCADLISLYVALEVLSIATFLL 133
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 155 IGwwYGRTD-ANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIfminLNENTLPLLGLLLAATGKSAQFGLHPWL 233
Cdd:PRK07234  134 VA--YPRTDrAIWVGLRYLFYSNVAMLFYLIGAVLVYQANGTFAFSGL----ATADPEAFALIALGLLVKGGIFVSGLWL 207
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 234 PSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLamcLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLM 313
Cdd:PRK07234  208 PLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRI---FGVGTALLGVLFALLEKDLKRMLAFSTISQLGFI 284
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 314 MVTIGINqpylAFLHIcTHAFFKAMLFLCSGsIIHNLNNEQDIRKMGGLFKALPLTtssliIGSLALTGIPFLTGFYSKD 393
Cdd:PRK07234  285 LAAPLVG----GLYAL-AHGLVKSTLFLCAG-ALPSRNFTELISQMLGIGKWIPLT-----MASFSIAGFPLLAGFVSKV 353
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*....
gi 1693290054 394 LIIesantSYTNAWALLITLIATSLTAIYSTRIIFFALLNQPRFQASTP 442
Cdd:PRK07234  354 LTL-----KNLLPWQAIALNLAAVGTAASFWKFIFLPFSADDEDKKPLP 397
PRK06589 PRK06589
putative monovalent cation/H+ antiporter subunit D; Reviewed
76-478 3.23e-29

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235835 [Multi-domain]  Cd Length: 489  Bit Score: 121.46  E-value: 3.23e-29
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  76 FTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDpNINRFFKYLLLFLITMIILVTAN---NLFQLFIGWEGVGIMSF 152
Cdd:PRK06589   75 YSIGLHLEPLGLIFLLLIGFLWICALLYTPKYLAIN-NIDSSSRFLFFFNLTILIGVLIAlssDLFTMFVCYELLTISTA 153
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 153 LLIGwwYGRTDANTAALQAVLynrigDVGFILAMAWFL---------LHSNSWELQQIFMINLNEntlPLLGLLLAATGK 223
Cdd:PRK06589  154 FLIG--HTRNNISLSGGYKYL-----KILMISALLLFLpaviliytkTGNLDFVSGGLFSKNQSI---ILLLMFIYGIAK 223
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 224 SAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFY----------PLLQDNNLVLTLAMclgaITTLFTAICAL 293
Cdd:PRK06589  224 TAIFPVHSWLPAAMVAHYPVSALLHAVIVVKTGLFCIYKILlyifglsylqRIFAEFNWLIFIPI----VSIFYSSLKAL 299
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 294 TQNDIKKIVAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFLCSGSIIhNLNNEQDIRKMGGLFKALPLTT 370
Cdd:PRK06589  300 KTDNIKKILAYSTISQLSLALLSAFILTPKalgAAILHLVSHSFAKICLFYSMGSIY-SLKKEDQVDKLHGTSKSFPLIS 378
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 371 SSLIIGSLALTGIPFLTGFYSKDLIIESANTSyTNAWALLITLIATSLTAIYSTRIIFFALLN--QPRFQASTPIDENNP 448
Cdd:PRK06589  379 FIISISSLSLIGIPIFSGFISKFLILLAASEQ-NQPWLSIIVMLVVIASSILSALYLLKILSSiyKPSLSENSFITKSLP 457
                         410       420       430
                  ....*....|....*....|....*....|
gi 1693290054 449 HLINPIKRLAAGSVFAGFLISNNIMPMTTP 478
Cdd:PRK06589  458 YLMQISVITCCCALTLFYFIQILIREFLAY 487
PRK08376 PRK08376
putative monovalent cation/H+ antiporter subunit D; Reviewed
80-473 1.23e-28

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236252 [Multi-domain]  Cd Length: 521  Bit Score: 120.20  E-value: 1.23e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  80 FKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWY 159
Cdd:PRK08376   86 WEVDLFGAFMALIATIVSFLAVLYSISYMKHDTGLDKYYTLILLLELGMLGMAITGDLFNFFVFLEIMSIASYALVAFRN 165
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 160 GRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIfMINLNENTLPL-----LGLLLAATGKSAQFGLHPWLP 234
Cdd:PRK08376  166 DTWEAIEAGIKYMFVGSLASSMVLLGIALLYGQYGTLNMAYL-AVKMSENPTVVakialALFIAGLAMKSGAVPVHMWLP 244
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 235 SAM-EGPTPVSALLHSSTmvVAGIFLLVR----FYPLLQDNNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQ 309
Cdd:PRK08376  245 DAYpAAPSSISAMLLVIK--QAGLYALARvlfsIYGPAINLATVGWVIIILGCLTMFVGVAMAVVQKDVKRLLAYHSVSQ 322
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 310 LGLMMVTIGINQPYL---------------AFLHICTHAFFKAMLFLCSGSIIHNLNNeQDIRKMGGLFKALPLTTSSLI 374
Cdd:PRK08376  323 IGYMLLGLGVGLAALgdpamasygeialagGIYHIVNHALYKALLFLTAGAVIYETGT-RNLNELGGLARTMPKTTIAFL 401
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 375 IGSLALTGIPFLTGFYSKDLIIESanTSYTNAWALLITLIATSLTAIYSTRIIFFALLNQPRFQASTPIDENNPHLInPI 454
Cdd:PRK08376  402 IGAAAIVGLPPFNGFASKWLIYES--SALFNPILGVIAMIGSVLTLASFVKVFHTAFFGPPSEKVMNVKEPPKPMLV-PM 478
                         410       420
                  ....*....|....*....|..
gi 1693290054 455 KRLAAGSVFAGFL---ISNNIM 473
Cdd:PRK08376  479 LILAIAIIGMGLFpwqISDKLM 500
ND5 MTH00063
NADH dehydrogenase subunit 5; Provisional
118-433 5.54e-28

NADH dehydrogenase subunit 5; Provisional


Pssm-ID: 214414 [Multi-domain]  Cd Length: 522  Bit Score: 118.06  E-value: 5.54e-28
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 118 FKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAVLYNRIGDVG--FILAMAWFLLHSNS 195
Cdd:MTH00063   79 NKLIVLFVLVMGILVLTGDFLSTLIFWEYLGVVSFFLI-LFYDNFLSLRASVVTLVSSRFGDVClfLLIGLSCWGGSGSF 157
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 196 WELQQIFMInlnentlpllglllaATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLT 275
Cdd:MTH00063  158 LCCLFFFLI---------------VFTKSASFPFISWLLEAMRAPTPVSSLVHSSTLVAAGVWFVMRYDYLLGFSWLSIF 222
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 276 LaMCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQD 355
Cdd:MTH00063  223 F-SVLLLLTIFITGVSSLFFSDLKKIVALSTCNNISWCVLYLIYGDVILSLFQLVSHGVSKCLLFMLVGDVMSGSGGSQS 301
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 356 IR-----KMGGLFkaLPLTTSSLIIGslaLTGIPFLTGFYSKDLIIESANTSYTNAWALLITLIATSLTAIYSTRiiFFA 430
Cdd:MTH00063  302 SNcvyssILYGSW--NLFYLFLLVLG---LSGVPFIGVFFSKHFLLSSFSSVVFNVSLLLVVILCVFLSYLYSFR--LCL 374

                  ...
gi 1693290054 431 LLN 433
Cdd:MTH00063  375 ILF 377
PRK12668 PRK12668
Na(+)/H(+) antiporter subunit D;
132-410 4.17e-27

Na(+)/H(+) antiporter subunit D;


Pssm-ID: 237168 [Multi-domain]  Cd Length: 581  Bit Score: 115.76  E-value: 4.17e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 132 VTANNLFQLFIGWEGVGIMSFLLIgWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIFminlNENTL 211
Cdd:PRK12668  110 VFAGDLLTLFVFWELMAFTSTFLV-WARGTKAAVRAGFRYLLVHVLGGVLLLAGILLHYAETGSFAFGAIA----GLGGT 184
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 212 PLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPllqdNNLVLTLamcLGAITTLFTAIC 291
Cdd:PRK12668  185 AAWLILIGFGVNAAFPPLHAWLPDAYPEATVTGSVFLSAFTTKTAVYALARAFP----GTELLIY---IGAAMAVYGVFF 257
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 292 ALTQNDIKKIVAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFLCSGSIIHNLNnEQDIRKMGGLFKALPL 368
Cdd:PRK12668  258 ALLENDLRRLLSYHIVSQVGYMVAGIGIGTALAingAVAHAFNHILYKGLLFMSAGAVLYRTG-TEKLTELGGLYRSMPL 336
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|...
gi 1693290054 369 TTSSLIIGSLALTGIPFLTGFYSKDLIIESAN-TSYTNAWALL 410
Cdd:PRK12668  337 TALFCLVGALSISAFPLFSGFVSKSMIISAAGeDHYVWVWLLL 379
PRK08667 PRK08667
hydrogenase membrane subunit; Validated
52-418 7.94e-27

hydrogenase membrane subunit; Validated


Pssm-ID: 236331 [Multi-domain]  Cd Length: 644  Bit Score: 115.60  E-value: 7.94e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  52 TLYIWSGQEMVISNWHWMTTqtmkFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWY---MHSDPNINRFFKYLLLFLITM 128
Cdd:PRK08667   49 SLQLFTGNPLDIPLWGIAPG----LDITFHIDRLAAFFIILIGLVSLCVAIYSLGYnehMSSNERANLLSALTALFILSM 124
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 129 IILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQqIFMINLNE 208
Cdd:PRK08667  125 LGVVASANTFSFLFFWEIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELS-PLGASAGI 203
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 209 NTLPLLGLLLAATGKSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLVRFY-----PLLQDNNLVLTLamclGA 282
Cdd:PRK08667  204 LSLVFLLLFLGFGIKAGIIPFHKWLPYAHPAsPSNVSALM-SGVMLKVAVYGLVRFLmdvlsPELWWGVLILLA----GS 278
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 283 ITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGI-------NQPYLAFL-------HICTHAFFKAMLFLCSGSIIH 348
Cdd:PRK08667  279 ISALLGVIYALKEHDLKGLLAYSSIENIGIILMGIGLyvifgvyGLDTLALLalggalfHSLNHALFKSLLFLTAGSVVH 358
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 349 NLNNeQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTSYTNAWALLITLIATSL 418
Cdd:PRK08667  359 ATGT-RNIEKMGGLVKLMPYTSALFLVGAVSIAALPPFNGFASELLLYESFFQSFSVADPLIKILLFSVL 427
PRK08377 PRK08377
NADH dehydrogenase subunit N; Validated
85-427 8.58e-27

NADH dehydrogenase subunit N; Validated


Pssm-ID: 181406 [Multi-domain]  Cd Length: 494  Bit Score: 114.09  E-value: 8.58e-27
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  85 FSLIFIPVALFVTWSIMEFSMWYMHSDPninrFFKYLLLFLITMII---LVTANNLFQLFIGWEGVGIMSFLLIGwwYGR 161
Cdd:PRK08377   79 FAALFVLIIAIVSFIMSIFSLKAVEVEP----IDKYAMLFLLLMLGatgMIATGDIFNLFVFMEITAITAYALTA--YNK 152
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 162 T-DANTAALQAVLYNRIGDVGFILAMAwfLLHSNSWEL------QQIFMINLNENTLPLLGLLLAATGKSAQFGLHPWLP 234
Cdd:PRK08377  153 TgEAAEASMKYIVLGGIGSSFFLIGVA--LIYGATGTLnmahiaQLAGTIDPTVAQVGLALLIFGLAVEAELFPLNAWAP 230
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 235 SAMEG-PTPVSALLhSSTMVVAGIFLLVRFYPLLQDNN---LVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQL 310
Cdd:PRK08377  231 DAYQAaPHPITVMF-SAFVVKAGLYAMARILYLMQNANgwsSVLKLVIIMATLTVFFAELSALRQKNVKRMIAYSSIGQV 309
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 311 GLMMVTIGINQPY---LAFLHICTHAFFKAMLFLCSGSIIHNLNNEQdIRKMGGLFKALPLTTSSLIIGSLALTGIPFLT 387
Cdd:PRK08377  310 GMIALALALGTQAgvdAGVFHMINHAIVKALLFLAVGYVGITLGGTE-IEKFEGLGKRMPLTALALTIGALSTVGIPLFN 388
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1693290054 388 GFYSK-DLIIESANTSYTnaWALLITLIATSLTAIYSTRII 427
Cdd:PRK08377  389 VFWSKfRIILAGLSAGYT--WPVALVLGASVVEAVYYFRLI 427
PRK06458 PRK06458
hydrogenase 4 subunit F; Validated
80-428 1.57e-25

hydrogenase 4 subunit F; Validated


Pssm-ID: 235805 [Multi-domain]  Cd Length: 490  Bit Score: 110.40  E-value: 1.57e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  80 FKLDYFSLIFIPVALFVTWSIMEFSMWYM-------HSDPNINRFFKYLL-LFLITMIILVTANNLFQLFIGWEGVGIMS 151
Cdd:PRK06458   65 FFIDDLNVFFLALIGVVGFLTSLYSIGYMrhevehgELSPVTLRLYYGMYqLFLFTMLLALTSNNLGLMWVAIEATTLSS 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 152 FLLIGwwygrTDANTAALQAVL-YNRIGDVGF-------IL--------------AMAWFLLHSNSWELQQIFMinlnen 209
Cdd:PRK06458  145 ALLVG-----IYRTRASLEAAWkYIIICSVGVafalfgtILvyanaatvmgdgemAILWTELLKHASLLDPTLM------ 213
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 210 TLPLLGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAgIFLLVRFYPLLQ---DNNLVLTLAMCLGAITT 285
Cdd:PRK06458  214 KLAFVFLLIGFGTKVGLFPMHAWLPDAhSEAPSPVSALLSGVLLNVA-LYAVLRYYILIDaaiGSDFPGRLLLIFGLLSV 292
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 286 LFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQP---YLAFLHICTHAFFKAMLFLCSGSIIHNLnNEQDIRKMGGL 362
Cdd:PRK06458  293 LVAAFFLLRQRDIKRLFAYSSIEHMGLIAFALGIGGPlgiFAALLHMLNHSLTKSAIFFASGNVLQKY-GTRDINVIRGL 371
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1693290054 363 FKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESA-NTSYTNAWALLITLIATSLTAIYS--TRIIF 428
Cdd:PRK06458  372 LKVSPLTGWGLMLGALAIAGMPPFGVFISEFLILTAGlARGPLLIAILLLLLLTLAFAALVRrvAGMVF 440
PRK06521 PRK06521
hydrogenase 4 subunit B; Validated
123-398 6.78e-24

hydrogenase 4 subunit B; Validated


Pssm-ID: 235820 [Multi-domain]  Cd Length: 667  Bit Score: 106.51  E-value: 6.78e-24
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 123 LFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALqavLYNRIGDVGFILAMAWFLL---HSNSWELQ 199
Cdd:PRK06521  121 LFLASMVLVLLADDAFSFLVAWETMSLSSWFLVIANHREAEIRRAGF---LYLLMAHAGALAILLAFGLlarESGSYDFA 197
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 200 QIFMINLNENTLPLLGLLLAA--TGKSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLVRF-YPLLQDNNL--- 272
Cdd:PRK06521  198 AMRAAHLSPFWASLVFLLALFgfGAKAGLVPLHVWLPRAHpAAPSHVSALM-SGVMLKVAIYGILRVvFDLLGAPGWwwg 276
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 273 VLTLAmcLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGI-------NQPYLAFL-------HICTHAFFKAM 338
Cdd:PRK06521  277 VLVLA--LGAISAVLGVLYALAEHDLKRLLAYSTIENIGIIFVGLGLamvfiayGMPLLAALaltaalyHLLNHALFKSL 354
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 339 LFLCSGSIIHNLnNEQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIES 398
Cdd:PRK06521  355 LFLGAGAVLHAT-GTRDMEKLGGLIRRMPWTAWAFLIGCLAISALPPLNGFVSEWLLLQS 413
PRK08668 PRK08668
NADH dehydrogenase subunit M; Validated
76-399 3.13e-23

NADH dehydrogenase subunit M; Validated


Pssm-ID: 236332 [Multi-domain]  Cd Length: 610  Bit Score: 103.92  E-value: 3.13e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  76 FTLSFKLDYFSLIFIPVALFVTWSIMEFSM-WYMHSDPNINRFfkyLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLL 154
Cdd:PRK08668   61 FKLTFTLTHLSWFFAMISLLVIFSVAFFMVsEKTKNDAYFNMF---ALMSLAGVLGVFLANDLLTLYIFWEIMTFSSFMM 137
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 155 IgwWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQI--FMINLNENTLPLLGLLLAAT---GKSAQFGL 229
Cdd:PRK08668  138 V--PMGKKESRKASLKYFVLSAIGAYAMLYAIFLIYAKTGTFDFADIsqGLINDTSTGFALIVFLFLLAfgvAKAGIFPL 215
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 230 HPWLPSAM-EGPTPVSALLhSSTMVVAGIFLL---------VRFYPLLQDNNLVLTLA---MCLGAITTLFTAICALTQN 296
Cdd:PRK08668  216 HVWAPDAYsEAPQSFSAVL-SGQLSKLGAYGFllvlyvlpgTKLFSEFGTYRGVPLFNyilAWLGNISIIVGTLMAILQE 294
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 297 DIKKIVAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFLCSGSIIHNlNNEQDIRKMGGLFKALPLTTSSL 373
Cdd:PRK08668  295 DIKKLIAYSSVANGGYILVGLGLGTSLgfaGGLFHVFNHALFKGLFFLIFAAVIYR-TGTTKISEMGGLIEKMPFTFAMY 373
                         330       340
                  ....*....|....*....|....*.
gi 1693290054 374 IIGSLALTGIPFLTGFYSKDLIIESA 399
Cdd:PRK08668  374 LVAIISLAGIPPMSGFASKWLIFEAL 399
PRK12663 PRK12663
Na+/H+ antiporter subunit D;
76-465 5.00e-23

Na+/H+ antiporter subunit D;


Pssm-ID: 237163 [Multi-domain]  Cd Length: 497  Bit Score: 102.72  E-value: 5.00e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  76 FTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMhsDPNINRFFKY-LLLFLITMII--LVTANnLFQLFIGWEGVGIMSF 152
Cdd:PRK12663   69 FGIQFTGDSLSALMVTTASFVATAIMAYGFGDI--EHSGRRYGFPpFILLLMAGVIgsFLTGD-LFNLYVWFEVMLIASF 145
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 153 LLI--GwwyGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIFM-INLNENTLPLLGLLLAATG----KSA 225
Cdd:PRK12663  146 VLItlG---QEREQLRGAIKYVVLNLIGSWLFLLGIGLLYGTFGTLNMAHIAMrLNDMGDTATLTTIALLFLLafgmKAA 222
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 226 QFGLHpWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLL--QDNNLVLTLAMCLGAITTLFTAICALTQNDIKKIVA 303
Cdd:PRK12663  223 LFPFM-WLPAAYHTPNTEVAALFAALLTKVGIYALIRVFTLLfpQERELLHPLLATMAAITMVIGALGALAYKDIRRIAG 301
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 304 FSTSSQLGLMMVTIGINQP--------YLAFLHIcthafFKAMLFLCSGSIIHnLNNEQDIRKMGGLFKALPLTTSSLII 375
Cdd:PRK12663  302 YQVISSIGFILLGLALGTPagingaifYLVHDMV-----VKTALFLIAGSLVR-LTGYRSLQYLGGLYRKEPLFGALFLI 375
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 376 GSLALTGIPFLTGFYSKDLIIESANTSytNAWALLITLIATSLTAIYSTRIIFFALLNQPRFQASTPIDENNPHLINPIK 455
Cdd:PRK12663  376 LIFAIGGLPPFSGFWGKVLLVQGALDN--GAYILLALMLITSLITMYSLFRIFFLAYWGDKDGEEVNFKPIPLYRKLPLS 453
                         410
                  ....*....|
gi 1693290054 456 RLAAGSVFAG 465
Cdd:PRK12663  454 ILAVVVIAMG 463
PRK05846 PRK05846
NADH:ubiquinone oxidoreductase subunit M; Reviewed
37-423 4.83e-22

NADH:ubiquinone oxidoreductase subunit M; Reviewed


Pssm-ID: 235622 [Multi-domain]  Cd Length: 497  Bit Score: 99.89  E-value: 4.83e-22
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  37 KTSIMYALSTSTIP--TTLYIWSGQEMVISNWHWMTTQT--MKFTLSFKL--DYFSLIFIPVALFVTwSIMEFSMWYMHS 110
Cdd:PRK05846   29 RLARWIALIGTLLTllLSLVLWIGFDSSNAGFQFVEKHPwiPRFGISYHLgvDGISLLLVVLTALLT-PLAVLASWEEIK 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 111 DpNINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWyGRTDANTAALQAVLYNRIGDVGFILAM---- 186
Cdd:PRK05846  108 K-RVKFYMAALLWLEGGVIGVFAALDLLLFYVFFEAMLIPMYFLIGVW-GGKNRIYAATKFFLYTLLGSLLMLVAIiylv 185
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 187 AWFLLHSNSWELQQIFMINLNENTLPLLGLLLAA--TGKSAQFGLHPWLPSAM-EGPTPVSALLhsstmvvAGIFL---- 259
Cdd:PRK05846  186 VVYYNATGTFDIADLLNLPLPPGVQYWLFLAFFIafAVKMPMFPLHTWLPDAHvQAPTAGSVLL-------AGILLkmga 258
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 260 --LVRF-YPLLQD-NNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLmmVTIGI---NQPYL--AFLHIC 330
Cdd:PRK05846  259 ygLLRFsLPLFPDaSHEFAPIIITLGVIAIIYGALVALAQTDIKKLIAYSSISHMGF--VTLGIfagNQLGIqgAIFQMI 336
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 331 THAFFKAMLFLCSGSIIHNLNNEqDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTSYTnawalL 410
Cdd:PRK05846  337 SHGLSSAALFLLVGVLYDRLHTR-DIADYGGLAKVMPVLAAFFLFFAMASLGLPGTSGFVGEFLILLGSFQVNP-----V 410
                         410
                  ....*....|....*.
gi 1693290054 411 ITLIATS---LTAIYS 423
Cdd:PRK05846  411 IAFIATTgliLAAVYS 426
PRK12662 PRK12662
putative monovalent cation/H+ antiporter subunit D; Reviewed
114-427 9.97e-21

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 183662 [Multi-domain]  Cd Length: 492  Bit Score: 95.57  E-value: 9.97e-21
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 114 INRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTdANTAALQAVLYNRIG------DVGFILAMA 187
Cdd:PRK12662  109 IPSFYSAFLLCLGGLLGILVSNDVFNIYVFLEISSISSYVLVAMGRDKK-ALVAAFEYLIIGTIGatfyliGIGFLYAIT 187
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 188 WFLLHSNSWELQQIFMINlNENTLPLLGLLLAATGKSAQFGLHPWLPSAM-EGPTPVSALLhSSTMVVAGIFLLVR-FYP 265
Cdd:PRK12662  188 GTLNMGDMFLIIQDLPTN-RAIQIGVLFIMVGLFIKAALFPFHKWLIQAYsEAPSFISVFF-SGTSTKVMIYLIIRiVYD 265
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 266 LLQDNNLVLTLA-----MCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKA 337
Cdd:PRK12662  266 VFKANFVFTTLPfnnvfMILAALAIVFGSVLAILSKDIKRIFAYSSISHIGYIILAVSLNTYYglaAAVAYIVNHSIVKS 345
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 338 MLFLCSGSIIHNLNNeQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTSytNAWALLITLIATS 417
Cdd:PRK12662  346 ALFMVSGSISYHFGT-TKLEDCLNLWKSMPKITLAFVLLSLSLIGMPPTSGFVAKWYILDAFIKS--NAWIGLVVLLVGS 422
                         330
                  ....*....|.
gi 1693290054 418 -LTAIYSTRII 427
Cdd:PRK12662  423 gLSVIYVWKIV 433
PRK07691 PRK07691
putative monovalent cation/H+ antiporter subunit D; Reviewed
76-428 1.53e-20

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 181085 [Multi-domain]  Cd Length: 496  Bit Score: 95.02  E-value: 1.53e-20
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  76 FTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLI 155
Cdd:PRK07691   69 FGIVFVADMFAALLVLTSSIITFLVILYSFQTIGIERERYYYYPSVLFMLAGVNGAFLTGDIFNLFVFFEVMLMASYVLI 148
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 156 GwwYGRTDAN-TAALQAVLYNRIGDVGFILAMAWF------------------LLHSNSWELQQIFMINLnentlpllgl 216
Cdd:PRK07691  149 V--IGGTKIQlRESIKYVLINVVSSAFFVVAVAILysvvgtlnmadisvkiaeLSAGQTGLITVVAILFL---------- 216
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 217 lLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLL--QDNNLVLTLAMCLGAITTLFTAICALT 294
Cdd:PRK07691  217 -FVFATKAGLFPLYFWLPGSYYAPPIAIAALFGALLTKVGVYAIARTFTLFfsHDTSFTHYLILILALLTIIFGVIGAVA 295
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 295 QNDIKKIVAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFLCSGSIIHnLNNEQDIRKMGGLFKALPLTTS 371
Cdd:PRK07691  296 YFDIKKIIIYNIMIAVGVILVGVAMMTESGmigAIYYLIHDMIVKAALFLLIGIMIK-ITGTTDLKKMGGLIKRYPVLGW 374
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*..
gi 1693290054 372 SLIIGSLALTGIPFLTGFYSKDLIIESAnTSYTNAWALLITLIaTSLTAIYSTRIIF 428
Cdd:PRK07691  375 MFFIAALSLAGIPPLSGFYGKFFIVEGT-FEAGFYVSGIIVLL-SSLLVLYSVIKIF 429
NuoN COG1007
NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH: ...
66-422 1.14e-19

NADH:ubiquinone oxidoreductase subunit 2 (chain N) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 2 (chain N) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440631 [Multi-domain]  Cd Length: 473  Bit Score: 92.10  E-value: 1.14e-19
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  66 WHWMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMhSDPNINRFFKYLLLFLIT--MIILVTANNLFQLFIG 143
Cdd:COG1007    52 LALGGGTGTAFGGMFVVDGFALFFKLLILLAALLVLLLSRDYL-ERRGLLRGEFYALLLFATlgMMLMASANDLLTLFLG 130
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 144 WEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIfMINLNENTLPLLGLLlaatgk 223
Cdd:COG1007   131 LELLSLSLYVLVAFRRDDRRSSEAALKYFLLGALSSGFLLYGISLLYGATGSLNLAGI-AAALAAGGANSPLLL------ 203
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 224 saqFGL----------------HPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLVRF--YPLLQDNNLVLTLAMCLGAIT 284
Cdd:COG1007   204 ---LGLvlvlaglafklsavpfHMWTPDVYEGaPTPVTAFL-ATAPKIAAFAALLRLlvEAFPGLAADWQLLLAVLAVLS 279
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 285 TLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQP---YLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGG 361
Cdd:COG1007   280 MTVGNLAALAQTNVKRMLAYSSIAHAGYLLLGLAAGTPlgvSAALFYLLAYLFMNLGAFAVILLLSRKGGEAEEIEDLAG 359
                         330       340       350       360       370       380
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1693290054 362 LFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTSytNAWALLITLIATSLTAIY 422
Cdd:COG1007   360 LARRSPLLALAMTIFLLSLAGIPPTAGFFGKFYVFSAAVEA--GLYWLAVIAVLNSVISAY 418
PRK08601 PRK08601
NADH dehydrogenase subunit 5; Validated
81-351 6.60e-17

NADH dehydrogenase subunit 5; Validated


Pssm-ID: 236310 [Multi-domain]  Cd Length: 509  Bit Score: 83.93  E-value: 6.60e-17
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  81 KLDYFSLIFIpvaLFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYG 160
Cdd:PRK08601   72 TLAWLMAFFV---LTLGFIIQRFSVRYLLGDRSYRKYFALFTFTTGFASLAWLSGDLRLMALCWGATLLGLTLLIGLNKG 148
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 161 RTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIFM------INLNENTLPLLGLLLAATGKSAQFGLHPWLP 234
Cdd:PRK08601  149 WKVAREAAKISGMLFLISWLALALAIVWLFIATGEWQLTSVLSnenlaqLGTWEKTGINLLLILAVMIPAAQWPFQRWLI 228
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 235 SAMEGPTPVSALLHSStMVVAGIFLLVRFYPLLqDNNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMM 314
Cdd:PRK08601  229 ESAVAPTPVSAIMHAG-LVNAGGIMLTRFSPLF-HDDIAQILLLIFASISVLIGTGISLVQVDYKRQLVGSTMAQMGFML 306
                         250       260       270
                  ....*....|....*....|....*....|....*..
gi 1693290054 315 VTIGINQPYLAFLHICTHAFFKAMLFLCSGSIIHNLN 351
Cdd:PRK08601  307 VQCALGAYSAAIIHLILHGLFKATLFLQSGSAVPRFN 343
PRK08676 PRK08676
hydrogenase membrane subunit; Validated
223-422 1.77e-16

hydrogenase membrane subunit; Validated


Pssm-ID: 181537 [Multi-domain]  Cd Length: 485  Bit Score: 82.50  E-value: 1.77e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 223 KSAQFGLHPWLPSA-MEGPTPVSALLhSSTMVVAGIFLLVRFYPLLQDNNL---VLTLAMCLGAITTLFTAICALTQNDI 298
Cdd:PRK08676  219 KSGLVPFHTWLPAAyAKAPSVVSALL-SGTVLNIGIYGILRLSALLRQSGAaeqFSNVLIGLGIFSIAVAAFSMLSQRNL 297
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 299 KKIVAFSTSSQLGLMMVTIGINQP---YLAFLHICTHAFFKAMLFLCSGsIIHNLNNEQDIRKMGGLFKALPLTTSSLII 375
Cdd:PRK08676  298 KKLIAFSSIEHMGLMLLGIGIGTPlalFWMLFHMLAHSLVKSGLFFSAG-ILHRQYRSDRFDRIFDVFRLQPVAAWGVIL 376
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*....
gi 1693290054 376 GSLALTGIPFLTGFYSK-DLIIESANTS-YTNAWALLITLIATSLTAIY 422
Cdd:PRK08676  377 GSAAIIGMPPFPLFLSKfFILLQLGGISvWLVLAVLLLLLLAASSFAIF 425
PRK05777 PRK05777
NADH-quinone oxidoreductase subunit NuoN;
76-427 4.28e-16

NADH-quinone oxidoreductase subunit NuoN;


Pssm-ID: 235603 [Multi-domain]  Cd Length: 476  Bit Score: 81.02  E-value: 4.28e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  76 FTLSFKLDYFSLIFIPVALFVTWsimeFSMWYMHSDPNINRFFKYLLLFLIT---MIILVTANNLFQLFIGWEGVGIMSF 152
Cdd:PRK05777   65 FGGMLVVDGFALFLKGLILLASL----LALLLARPYLEDRGRGEFYLLVLFAllgMMVMVSANDLLTLFLGLELLSLPLY 140
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 153 LLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIF-MINLNENTLPLLGLLLAATG-----KSAQ 226
Cdd:PRK05777  141 ALAALRRDRRRSLEAAIKYFVLGALASGFLLYGMSLLYGATGSLSFAGIAkALADGSGNSLLLLFGLVFLLvglafKLSA 220
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 227 FGLHPWLPSAMEG-PTPVSALLHSSTMvVAGIFLLVRFY-----PLLQDNNLVLTLamcLGAITTLFTAICALTQNDIKK 300
Cdd:PRK05777  221 VPFHMWTPDVYEGaPTPVTAFLATAPK-IAAFAVLLRLLvvafgGLSEDWQQVLAI---IAIASMLVGNLAALSQTNIKR 296
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 301 IVAFSTSSQLGLMMV--TIGINQPYLA-FLHICTHAFFKAMLFLCSGSIIHNLNNEQDIRKMGGLFKALPLTTSSLIIGS 377
Cdd:PRK05777  297 LLAYSSIAHAGYLLVglAAGTAEGYSAvLFYLLAYLFMTLGAFGVISLLRRKGGEAESISDFAGLSKRSPLLAAVMTIFM 376
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1693290054 378 LALTGIPFLTGFYSKDLIIESANTSytNAWAL-LITLIATSLTAIYSTRII 427
Cdd:PRK05777  377 LSLAGIPPTAGFWGKFYVFEAAVEA--GLWWLaVIGVLNSAIGAFYYLRVI 425
PRK06473 PRK06473
NADH-quinone oxidoreductase subunit M;
110-437 7.35e-15

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 235810 [Multi-domain]  Cd Length: 500  Bit Score: 77.43  E-value: 7.35e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 110 SDPNINR--FFKYLLLFLITMII-LVTANNLFQLFIGWEGVGIMSFLLIGWWyGRTDANTAALQAVLYNRIGD----VGF 182
Cdd:PRK06473   99 SDESIQRprFYYSLLLLLNAGVSgAFLAQDLLLFFLFYELELIPLYLLIAIW-GGQRRGYAATKFLLYTAISGililVSF 177
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 183 iLAMAWFLLHSN-SWELQQIFMINLNENTLPLLGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhsstmvvAGIFLL 260
Cdd:PRK06473  178 -LGLVWLSGASSfDYEPLRSHTLPLSTQLLLLAPILVGFGIKIPLVPFHTWLPDAhVEASTPVSVLL-------AGVLLK 249
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 261 VRFYPLLQDN-NLVLT--------LAMcLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPY---LAFLH 328
Cdd:PRK06473  250 LGTYGLLRFGvGLFPEawvylapwLAT-WAVVSVLYGASCAIAQKDMKKMVAYSSIGHMGYILLAAAAATPLsilAAVFQ 328
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 329 ICTHAFFKAMLFLCSGsIIHNLNNEQDIRKMGGLF---KALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTSYtn 405
Cdd:PRK06473  329 MISHGLISALLFLLVG-VVYKKTGSRDVDVLRGLLnpeRGLPITGSLMILGVMASAGIPGMVGFIAEFLVFRGSFPIF-- 405
                         330       340       350
                  ....*....|....*....|....*....|..
gi 1693290054 406 AWALLITLIATSLTAIYstriiFFALLNQPRF 437
Cdd:PRK06473  406 PVQTLLCMIGTGLTAVY-----FLLLVNRVFF 432
PRK12665 PRK12665
putative monovalent cation/H+ antiporter subunit D; Reviewed
223-422 7.98e-15

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237165 [Multi-domain]  Cd Length: 521  Bit Score: 77.32  E-value: 7.98e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 223 KSAQFGLHPWLP-SAMEGPTPVSAllhsstmVVAGIFLLVRFYPLLQDNNLVL------TLAMCLGAITTLFTAICALTQ 295
Cdd:PRK12665  222 KAAVFPLSFWLPdSYPTAPAPVTA-------VFAGLLTKVGVYAIIRTHTLLFpgggldTLLMVVALLTMVVGILGAIAQ 294
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 296 NDIKKIVAFSTSSQLGLMMVTIGINQPY---LAFLHICTHAFFKAMLFLCSGsIIHNLNNEQDIRKMGGLFKALPLTTSS 372
Cdd:PRK12665  295 SDIKRLLSFTLVSHIGYMVFGIALSTVAglsGAIYYVAHHITVQTTLFLVVG-LIERQAGSSSLRRLGGLAKASPLLAVL 373
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1693290054 373 LIIGSLALTGIPFLTGFYSKDLIIES-ANTSYTNAWALLITLIATSLTAIY 422
Cdd:PRK12665  374 FFVPALNLGGIPPFSGFIGKVALLEAgAEDGTWLAWALVAGGVVTSLLTLY 424
Proton_antipo_N pfam00662
NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an ...
68-118 9.26e-15

NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; This sub-family represents an amino terminal extension of pfam00361. Only NADH-Ubiquinone chain 5 and eubacterial chain L are in this family. This sub-family is part of complex I which catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane.


Pssm-ID: 459895 [Multi-domain]  Cd Length: 51  Bit Score: 68.61  E-value: 9.26e-15
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1693290054  68 WMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFF 118
Cdd:pfam00662   1 WLSVGDLSISFGFLIDPLSALMLLVVTGVSLLVHIYSIGYMHHDPGYARFF 51
PRK12561 PRK12561
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
103-422 1.49e-14

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 237137 [Multi-domain]  Cd Length: 504  Bit Score: 76.61  E-value: 1.49e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 103 FSMWYMHSDPninRFFKYLLLFLITMIILV-TANNLFQLFIGWEGVGIMSFLLIGWWYGRtDANTAALQAVLYNRIGDVg 181
Cdd:PRK12561   77 FASWKVTRKP---RLFYFLMLVLYSAQIGVfLAQDLLLFFLMWELELVPVYLLISIWGGQ-KRLYAATKFILYTALASI- 151
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 182 FIL----AMAwFLLHSNSWELQQIFMIN--LNENTLPLLGLLLAATGKSAQFGLHPWLPSAM-EGPTPVSallhsstMVV 254
Cdd:PRK12561  152 FILvaglALA-LSGDTFTFDLAELGAKSypLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHgEASAPVS-------MIL 223
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 255 AGIFL------LVRF-YPLLQDNNLVLTLA-MCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTI------GIN 320
Cdd:PRK12561  224 AGVLLkmggyaLIRFnVQMLPDAHVYFAPAlAILGVVNIIYGALNAFAQDNVKRRLAYSSVSHMGFVLLGIaaftdlGIS 303
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 321 QpylAFLHICTHAFFKAMLFLCSGSI---IHNLNneqdIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSK----- 392
Cdd:PRK12561  304 G---AMLQMISHGLIAAALFFLTGVTyerTHTLS----IPNMGGLAKVMPKTFALFTASSMASLALPGMSGFVSEltvfl 376
                         330       340       350
                  ....*....|....*....|....*....|
gi 1693290054 393 DLIIESANTSYTNAWALLITLIATSLTAIY 422
Cdd:PRK12561  377 GITSSDVYSSTFRTITILLAAVGLILTPIY 406
PRK08042 PRK08042
formate hydrogenlyase subunit 3; Reviewed
229-398 6.96e-14

formate hydrogenlyase subunit 3; Reviewed


Pssm-ID: 181206 [Multi-domain]  Cd Length: 593  Bit Score: 74.48  E-value: 6.96e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 229 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYplLQDNNLVL---TLAMCLGAITTLFTAICALTQNDIKKIVAFS 305
Cdd:PRK08042  199 LHGWVPQAHANASAPAAALFSTVVMKIGLLGILTLS--LLGGNAPLwwgVALLVLGMITAFVGGLYALMEHNIQRLLAYH 276
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 306 TSSQLGLMMVTIG-------INQPYLAFL-------HICTHAFFKAMLFLCSGSIIHNlNNEQDIRKMGGLFKALPLTTS 371
Cdd:PRK08042  277 TLENIGIILLGLGagvtgiaLEQPALIALglvgglyHLLNHSLFKSVLFLGAGSVWFR-TGHRDIEKLGGIGKKMPVISI 355
                         170       180
                  ....*....|....*....|....*..
gi 1693290054 372 SLIIGSLALTGIPFLTGFYSKDLIIES 398
Cdd:PRK08042  356 AMLVGLMAMAALPPLNGFAGEWVIYQS 382
PRK07363 PRK07363
NADH-quinone oxidoreductase subunit M;
78-437 9.30e-14

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 180945 [Multi-domain]  Cd Length: 501  Bit Score: 73.98  E-value: 9.30e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  78 LSFKL--DYFSLIFIPVALFVTWsIMEFSmwymhSDPNINR---FFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSF 152
Cdd:PRK07363   71 LSYSLgvDGLSLPLLVLNSLLTW-IAIYS-----IGENTERprlYYSLILLINGGIAGALLAQNLLLFFLFYELELIPFY 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 153 LLIGWWYGRTDAnTAALQAVLYNRIGD---VGFILAMAWfLLHSNSWELQQIFMINLNENTLPLLGLLLAAT--GKSAQF 227
Cdd:PRK07363  145 LLIAIWGGEKRG-YASIKFLIYTAVSGllvLAAFLGIVW-LSGSTSFDYDAISTQNLSLNTQLILLTGLLLGfgIKIPLV 222
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 228 GLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLL--QDNNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFS 305
Cdd:PRK07363  223 PLHTWLPDAYTEASPAVAILLGGVLAKLGTYGLLRFGLQLfpQTWSLVAPGLAIIGTISVIYGALSAIAQKDIKRMVAYS 302
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 306 TSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFLCSGsIIHNLNNEQDIRKMGGLF---KALPLTTSSLIIGSLA 379
Cdd:PRK07363  303 SIGHMGYILVAAAAGTQLSllgAVAQMISHGLILALLFHLVG-IVERKVGTRDLDVLNGLMnpiRGLPLTSALLVLAGMA 381
                         330       340       350       360       370
                  ....*....|....*....|....*....|....*....|....*....|....*...
gi 1693290054 380 LTGIPFLTGFYSKDLIIESANTSYtnAWALLITLIATSLTAIYstriiFFALLNQPRF 437
Cdd:PRK07363  382 SAGIPGLVGFVAEFIVFQGSFSTF--PIPTLLCIVASGLTAVY-----FVILLNRTCF 432
ndhB CHL00049
NADH dehydrogenase subunit 2
61-392 1.02e-13

NADH dehydrogenase subunit 2


Pssm-ID: 176990 [Multi-domain]  Cd Length: 494  Bit Score: 73.88  E-value: 1.02e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  61 MVISNWHWMTTQTMKFTLSFKLDYFSLIF-IPVALFVTWSIMeFSMWYMH-SDPNINRFFKYLLLFLITMIILVTANNLF 138
Cdd:CHL00049   56 ITALLFQWREEPMISFSGNFQTNNFNEIFqFLILLCSTLCIP-LSVEYIEcTEMAITEFLLFVLTATLGGMFLCGANDLI 134
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 139 QLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLynrIGDvgfilAMAWFLLHSNSW---------ELQQIF--MINLN 207
Cdd:CHL00049  135 TIFVALECLSLCSYLLSGYTKKDVRSNEATMKYLL---MGG-----ASSSILVYGFSWlyglsggeiELQEIVngLINTQ 206
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 208 ENTLPLLGLLLAATG-----KSAQFGLHPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLVR-----FYPLLQDNNLVLTL 276
Cdd:CHL00049  207 MYNSPGISIALIFITvgigfKLSLAPFHQWTPDVYEGsPTPVVAFL-SVTSKVAASALATRifdipFYFSSNEWHLLLEI 285
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 277 AMCLGAITTLFTAIcalTQNDIKKIVAFSTSSQLGLMMVTIGINQPYLAFLHICTHAFFkaMLFLCSGS----IIHNLNN 352
Cdd:CHL00049  286 LAILSMILGNLIAI---TQTSMKRMLAYSSIGQIGYVIIGIIVGDSNDGYASMITYMLF--YIFMNLGTfaciVLFGLRT 360
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|.
gi 1693290054 353 EQD-IRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSK 392
Cdd:CHL00049  361 GTDnIRDYAGLYTKDPFLALSLALCLLSLGGIPPLAGFFGK 401
NDH_I_N TIGR01770
proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th ...
80-427 1.47e-12

proton-translocating NADH-quinone oxidoreductase, chain N; This model describes the 14th (based on E. coli) structural gene, N, of bacterial and chloroplast energy-transducing NADH (or NADPH) dehydrogenases. This model does not describe any subunit of the mitochondrial complex I (for which the subunit composition is very different), nor NADH dehydrogenases that are not coupled to ion transport. The Enzyme Commission designation 1.6.5.3, for NADH dehydrogenase (ubiquinone), is applied broadly, perhaps unfortunately, even if the quinone is menaquinone (Thermus, Mycobacterium) or plastoquinone (chloroplast). For chloroplast members, the name NADH-plastoquinone oxidoreductase is used for the complex and this protein is designated as subunit 2 or B. This model also includes a subunit of a related complex in the archaeal methanogen, Methanosarcina mazei, in which F420H2 replaces NADH and 2-hydroxyphenazine replaces the quinone. [Energy metabolism, Electron transport]


Pssm-ID: 273795 [Multi-domain]  Cd Length: 468  Bit Score: 69.98  E-value: 1.47e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  80 FKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDpNINRF-FKYLLLF-LITMIILVTANNLFQLFIGWEGVGIMSFLLIGW 157
Cdd:TIGR01770  66 FIVDNFALLIKLILLLSTLLTFFFALSYLSKE-KINKFeFYILLLFaLLGIFLLVSSNDLLSIYLGLELQSLCFYVLAGL 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 158 WYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIFMINLNENTLPLLGLLLAATG------KSAQFGLHP 231
Cdd:TIGR01770 145 KRKSRFSTEAGLKYFILGAFSSGLLLFGISLIYGFTGSLNFEDLLLFLSNGMLNISLLLLGIVLIlvgllfKLSAVPFHM 224
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 232 WLPSAMEG-PTPVSALLhSSTMVVAGIFLLVRFYPLLQDN--NLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSS 308
Cdd:TIGR01770 225 WVPDVYEGaPTPVTAFF-SIVPKIAIFAVFLRLFLYILFGfsEAWQIFLAIIAFLSMLIGNFGALAQKKVKRLLAYSSIS 303
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 309 QLGLMMVTIGINQP---YLAFLHICTHAFFKAMLFLCSGSIIHNLNNEQD-IRKMGGLFKALPLTTSSLIIGSLALTGIP 384
Cdd:TIGR01770 304 HVGYILIGLLAGTLegiKAVLFYIFIYALMSLGAFGVLSLLRSYKDEWIEyISDFAGLFKTNPILAILILIFMFSLAGIP 383
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....
gi 1693290054 385 FLTGFYSKDLIIESAntSYTNAWALLITLIATS-LTAIYSTRII 427
Cdd:TIGR01770 384 PLAGFFGKFYVFFAL--LKSGLYWLAVIAVLTSvIGAFYYLRVV 425
PRK06277 PRK06277
energy conserving hydrogenase EhbF;
243-399 1.16e-11

energy conserving hydrogenase EhbF;


Pssm-ID: 235767 [Multi-domain]  Cd Length: 478  Bit Score: 67.36  E-value: 1.16e-11
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 243 VSALLH--SSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGIN 320
Cdd:PRK06277  233 GSALLQtfSKFVLVALMLVIFKLFGGLSYFPSAQGVLIALSVLAMVFGVVMALLQTDYKRLLAYHAISQGGYVAAGLALG 312
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 321 QPY---LAFLHICTHAFFKAMLFLCSGsIIHNLNNEQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIE 397
Cdd:PRK06277  313 TPLgivAGIFHAINHVIYKSALFLGAG-IVSYRTKTSNLRKLGGLLPVMPVVAFMVLCAKLAISGVPPFNGFQSKLMLAQ 391

                  ..
gi 1693290054 398 SA 399
Cdd:PRK06277  392 AA 393
PRK02504 PRK02504
NAD(P)H-quinone oxidoreductase subunit N;
68-392 4.16e-10

NAD(P)H-quinone oxidoreductase subunit N;


Pssm-ID: 235044 [Multi-domain]  Cd Length: 513  Bit Score: 62.38  E-value: 4.16e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  68 WMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYM-HSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWEG 146
Cdd:PRK02504   62 WDNPNPISFLGSFNADNLSIAFRAIIALSTLVTLLMSWRYVeQSGTPLGEFAAILLTATLGGMFLSGATELVMIFISLET 141
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 147 VGIMSFLLIGwwYGRTDA--NTAALQAVLynrIGDVgfilAMAWFL--------LHSNSWELQQIfMINLNENTLPLLGL 216
Cdd:PRK02504  142 LSIASYLLTG--YMKRDPrsNEAALKYLL---IGAA----SSAIFLygssllygLSGGSTQLSAI-ALALITSPSLGLAL 211
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 217 LLAATGKSAQFGL-----HPWLPSAMEG-PTPVSALLhSSTMVVAGIFLLVRF----YPLLQDN-NLVLT----LAMCLG 281
Cdd:PRK02504  212 ALVFVIAGIAFKIsavpfHQWTPDVYEGsPTPVVAFL-SVGSKAAGFALAIRLlvtaFPSFDEQwKLLFTalaiLSMVLG 290
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 282 AITtlftaicALTQNDIKKIVAFSTSSQLGLMMV--TIGINQPYLAF-LHICTHAFFKAMLFLCSgsIIHNLNNEQD-IR 357
Cdd:PRK02504  291 NVV-------ALAQTSMKRMLAYSSIGQAGFVMIglVAGTEAGYASMvFYLLAYLFMNLGAFACV--ILFSLRTGTDqIS 361
                         330       340       350
                  ....*....|....*....|....*....|....*
gi 1693290054 358 KMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSK 392
Cdd:PRK02504  362 DYAGLYQKDPLLTLGLSLCLLSLGGIPPLAGFFGK 396
ND4 MTH00226
NADH dehydrogenase subunit 4; Provisional
73-399 8.57e-10

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214466 [Multi-domain]  Cd Length: 505  Bit Score: 61.48  E-value: 8.57e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  73 TMKFTLSFKLDYFSLIFI-------PVALFVTWSIMEFSmwymhsdpnINRFFKYLLLFLITMIILVTANNLFQLFIGWE 145
Cdd:MTH00226   91 IMGGPLVFAVDGISIYFIiltgfivPCSILISWHSVKYL---------TKSFLICMLILEFLLYAVFSVLDIFMFYILFE 161
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 146 GVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAM-AWFLLHSNSWELQQI---FMINLNENTLPLLGLLLAAT 221
Cdd:MTH00226  162 GVLIPMYLILGIWGSREEKMQAAYYFFFYTLIGSVLMLLCLfSLYNIHGTTDYLTLAscsHVVSEQTQKWIFLGIFLAMA 241
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 222 GKSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLTLA-MCLGAITTLFTAICALTQNDIK 299
Cdd:MTH00226  242 VKIPIFPFHIWLPKAhVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAvIAMGIVGIVYGSFATCRQIDVK 321
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 300 KIVAFSTSSQLGLMMVT------IGINQPYLAFLhicTHAFFKAMLFLCSgSIIHNLNNEQDIRKMGGLFKALPLTTSSL 373
Cdd:MTH00226  322 RLVAYSSVAHMGLVSITlvthdiIGLTGSIFIML---AHGIVSSLLFILV-TILYDRHHTRLIKYYRGLSITMPIWGTIM 397
                         330       340
                  ....*....|....*....|....*.
gi 1693290054 374 IIGSLALTGIPFLTGFYSKDLIIESA 399
Cdd:MTH00226  398 IVTSLANVAVPPSGNFIGEYLSILSS 423
ND2 MTH00112
NADH dehydrogenase subunit 2; Provisional
229-397 1.24e-09

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214423 [Multi-domain]  Cd Length: 346  Bit Score: 60.22  E-value: 1.24e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 229 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLvrfypLLQDNNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSS 308
Cdd:MTH00112  111 FHFWLPEVLQGSTTTTALILSTWQKLAPLTLL-----LMTSNSLNPTLLLTLAILSTLIGGWGGLNQTQLRKIMAFSSIA 185
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 309 QLGLMMVTIGINqPYLAFLHICTHAFFKAMLFLcsgsiIHNLNNEQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTG 388
Cdd:MTH00112  186 HLGWMIAIITYS-PKLTLLTFYIYILMTTPMFL-----TLNTTSTKTLKDMMTSWTKSPTLNTTLMLTLLSLAGLPPLTG 259

                  ....*....
gi 1693290054 389 FYSKDLIIE 397
Cdd:MTH00112  260 FMPKWLILQ 268
ND4 MTH00217
NADH dehydrogenase subunit 4; Provisional
45-319 2.00e-08

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214462 [Multi-domain]  Cd Length: 482  Bit Score: 56.98  E-value: 2.00e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  45 STSTIPTTLYIWS-----GQEMVISNWHWMTTQTMKF-TLSFKLDYFSLIF-------IPVALFVTWSIMEFSmwymhsd 111
Cdd:MTH00217   35 SLLTLTATILLWAsfdgeGQFQAIKKFEWIPGIEPVFgPVVFAVDGISIFFliltallTPICILISWNSIKFL------- 107
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 112 pnINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMawFLL 191
Cdd:MTH00217  108 --IKEFLLCLLVIEILLMGVFTILDLVGFYILFEGILIPMFLIIGIWGSREEKVQASYYFFFYTFIGSVFMLLGI--FTL 183
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 192 HSN--SWELQQIFMINLNENT--LPLLGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhsstmvvAGIFL------L 260
Cdd:MTH00217  184 YSYagTTDYQALCCLKIEKELqyFIFLGFFLSLAIKIPKIPFHIWLPQAhVEAPVAGSVIL-------AGVLLklggygF 256
                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1693290054 261 VRF-YPLLQDNN-----LVLTL---AMCLGAITTlftaiCalTQNDIKKIVAFSTSSQLGLmmVTIGI 319
Cdd:MTH00217  257 IRFsWPLLPEASeyfspLIQTLsllAIIYGSLTT-----C--RQVDLKRIIAYSSVAHMGL--VTLGI 315
ND4 MTH00204
NADH dehydrogenase subunit 4; Provisional
58-423 5.72e-08

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 164750 [Multi-domain]  Cd Length: 485  Bit Score: 55.45  E-value: 5.72e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  58 GQEMVISNWHWMTTQTMKF---TLSFKLDYFSLIF-------IPVALFVTWSimefsmwymhsdpNINRFFKYLLLFLIT 127
Cdd:MTH00204   54 GQFQFINLIEWIISPTLNFqwgPLVFAVDGVSLFFillttllIPICILISWK-------------SIKFLFKEFLLCLLF 120
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 128 MIILV----TANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIFM 203
Cdd:MTH00204  121 LEVLLigvfSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSITGTTDYQILLN 200
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 204 INLNENTLPLLGL--LLAATGKSAQFGLHPWLPSA-MEGPTPVSALLhsstmvvAGIFL------LVRF-YPLLQDNNLV 273
Cdd:MTH00204  201 IKLPLSIQKWLLVgfFLSLAVKIPQIPFHIWLPQAhVEAPVAGSVIL-------AGILLklggygFLRFsWPLFPAASEY 273
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 274 LT-LAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLmmVTIGINQPYL-----AFLHICTHAFFKAMLFLCSgSII 347
Cdd:MTH00204  274 FApLIVMLSVIAVIYGSLTTCRQVDFKRLIAYSSVAHMGL--VPLGLFTHTIeglvaAVFLMLAHGFVSSALFIAV-TFL 350
                         330       340       350       360       370       380       390
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1693290054 348 HNLNNEQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTSYTnawaLLITLIATS--LTAIYS 423
Cdd:MTH00204  351 YERHHTRLIKYYRGLTLTMPLFVIIMLVLSLANMGFPLSCNFVGEFFSLLAAFEYSL----GLGVLVTSGmvWSAAYS 424
PRK06459 PRK06459
hydrogenase 4 subunit B; Validated
76-346 1.61e-07

hydrogenase 4 subunit B; Validated


Pssm-ID: 235806 [Multi-domain]  Cd Length: 585  Bit Score: 54.41  E-value: 1.61e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  76 FTLSFKLDYFSLIFIPVALFVTWsimeFSMWYMHSDPNINRFFKYLLLfliTMIILVTANNLFQLFIGWEGVGIMSFLLI 155
Cdd:PRK06459   40 YEYNGVLSFFSIISTIVWILASL----YSIEYDHYGKWLSSLYILTIL---GMAIVLTSDNYLLFLAGWEIMTIPSYVAI 112
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 156 GWWygrTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWelqqIFMINLNENTLPLLGLLLAATGKSAQFGLHPWLPS 235
Cdd:PRK06459  113 ALT---KKNKRPAFVFMAFGELSTVLILAGFAWAFIISGTT----NFSYLPSPVPLILASFGFIIKMGMMPFLVSEWLPI 185
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 236 AM-EGPTPVSALLhSSTMVVAGIFLLVRFYPLLQDN--NLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTS----- 307
Cdd:PRK06459  186 AHgNAPSNFSAIL-SATMTLMGVYGILKMTILTQTIpiGYFGLTILAIGAFSILFGALYAYVSENVKGLLAFSTIennga 264
                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1693290054 308 --SQLGLMMVT------IGINQPYLAFLHICTHAFFKAMLFLCSGSI 346
Cdd:PRK06459  265 ilVALGLYMVTkqlitsIEHFSLITVILYSFAHSVAKTGLFLSSGLQ 311
ND2 MTH00196
NADH dehydrogenase subunit 2; Provisional
230-427 2.40e-07

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214453 [Multi-domain]  Cd Length: 365  Bit Score: 53.11  E-value: 2.40e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 230 HPWLPSAMEG-PTPVSALLhsSTMVVAGIF-LLVRFypllqdnNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTS 307
Cdd:MTH00196  115 HMWAPDVYEGaPTKTTALL--AIVPKLGIFsILVSI-------GLNVNILLIGGLFSLFVGAIGALNQTKIKRLLAYSGI 185
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 308 SQLGLMMVTIGINQpyLAFLHIC-THAFFKAMLFLCSGSIIHNLNNEQD-IRKMGGLFKALPLTTSSLIIGSLALTGIPF 385
Cdd:MTH00196  186 GHMGFVLWGIEIGS--FESIQASlVYLFIYIIMSICVFSIILALNVYKNlIIEFSGLSRRLPILAITLALTFLSIAGIPP 263
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|..
gi 1693290054 386 LTGFYSKDLIIESAnTSYTNAWALLITLIATSLTAIYSTRII 427
Cdd:MTH00196  264 LVGFLGKWLILLSG-VVYQYYLIFLLAVFCSVIAGVYYVRIV 304
ND4 MTH00206
NADH dehydrogenase subunit 4; Provisional
76-423 5.74e-07

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214458 [Multi-domain]  Cd Length: 450  Bit Score: 52.25  E-value: 5.74e-07
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  76 FTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPnINRFFKYLLLFLITMIILV---TANNLFQLFIGWEGVGIMSF 152
Cdd:MTH00206   51 SNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKNEP-INRQRIYITLLIVLQLFLIlffSSSNLLLFYILFEASLIPTL 129
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 153 LLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAW--FLLHSNSWELQQIFMINLNENTLPLLGLLLAATGKSAQFGLH 230
Cdd:MTH00206  130 LLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFlqNSLGSLSLYILYFSKLTTWNNNLWWLACILAFLVKLPLYGVH 209
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 231 PWLPSA-MEGPTpvsallhSSTMVVAGIFL------LVRFYPLLQ-DNNLVLTLAMCLGAITTLFTAICALTQNDIKKIV 302
Cdd:MTH00206  210 LWLPKAhVEAPV-------AGSMVLAGVLLklggygMMRIILILGpSTKLSSYFFIILGLWGSIMTSSICLRQTDLKSLI 282
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 303 AFSTSSQLGLM------MVTIGINQPYLAFLhicTHAFFKAMLFlCSGSIIHNLNNEQDIRKMGGLFKALPLTTSSLIIG 376
Cdd:MTH00206  283 AYSSVSHMSLVtagilsGSPWGFKGALLLMI---AHGLVSSALF-CLANLLYERSHTRTILGNRGLQMILPLLSFWWLLF 358
                         330       340       350       360
                  ....*....|....*....|....*....|....*....|....*..
gi 1693290054 377 SLALTGIPFLTGFYSKDLIIESANTSYTnaWALLITLIATSLTAIYS 423
Cdd:MTH00206  359 FLANLGLPPFPNLFGELLIITSLFSWSN--FTLPLLGLGFLFTAIYS 403
PRK12664 PRK12664
putative monovalent cation/H+ antiporter subunit D; Reviewed
280-405 1.39e-06

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237164 [Multi-domain]  Cd Length: 527  Bit Score: 51.27  E-value: 1.39e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 280 LGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPY-----LAFLHICTHAFFKAMLFLCSGSIIhNLNNEQ 354
Cdd:PRK12664  207 LGIITAIYGIIFASLEQNIRRLLCYNVVGQMGLLIIAIGFSGSSgvaigILILQIVLSVVYQTLLFMVADSVI-NRTRKF 285
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|.
gi 1693290054 355 DIRKMGGLFKAlPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTSYTN 405
Cdd:PRK12664  286 NLNRVGGLFKM-SLEAMCCIIAILNMGAFPGTAGFVSKSLITHSIDTAGLT 335
ND2 MTH00200
NADH dehydrogenase subunit 2; Provisional
121-477 1.49e-06

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177246 [Multi-domain]  Cd Length: 347  Bit Score: 50.74  E-value: 1.49e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 121 LLLFLITMIILvTANNLFQLFIGWEgVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQ 200
Cdd:MTH00200   11 LSLGLGTLLTF-SSSHWFLIWLGLE-INTLAIIPLLIKQHHPRKVEATTKYFIIQATASALLLFGGLLNAWTSGQWGISE 88
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 201 iFMINLNENTLPLLGLLlaatgKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLvltlaMCL 280
Cdd:MTH00200   89 -MLGPLSETLILLALAL-----KLGLAPGHFWVPDVLQGLSLQTGLILSTWQKLAPFALLIQLAPALNSNIL-----LLL 157
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 281 GAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINqPYLAFLHicthaFFKAMLFLCSGSIIHNLNNEQDIRKMG 360
Cdd:MTH00200  158 GLLSVLVGGWGGLNQTQLRKILAYSSIAHLGWLLSGLVYS-PNLALLY-----LLLYVIITLTVFLLLNLLNSTKINSLS 231
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 361 GLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESAnTSYTNAWALLITLIATSLTAIYSTRIIFFALLNQPRFQAS 440
Cdd:MTH00200  232 SSKTKNPILSMLLGLTLLSLGGLPPLTGFFPKWLILQEL-SKQGLFIYATILLLGSLLSLFFYLRLSYLTLLTLSPNQIN 310
                         330       340       350
                  ....*....|....*....|....*....|....*..
gi 1693290054 441 TPIDENNPHLINPIKRLAAGSVFAGFLISNNIMPMTT 477
Cdd:MTH00200  311 MMSSWRTKSNSNLLVGLLLLLSILGLPLTPQLLFLFF 347
ND2 MTH00144
NADH dehydrogenase subunit 2; Provisional
227-422 1.63e-06

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214432 [Multi-domain]  Cd Length: 328  Bit Score: 50.27  E-value: 1.63e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 227 FGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLvrfyPLLQDNNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFST 306
Cdd:MTH00144  101 FPFHFWVPSVMAGLSWLSCFLLLTWQKVAPLFLL----SNFLDLYWLAYLLCVISVLSALVGSIGGLNQTQVRALLAYSS 176
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 307 SSQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFLCSGSIIHNLNNEqdirkmgglfKALPLTTSSLIIGSLALTGI 383
Cdd:MTH00144  177 ISHTGWMLVAILHGSWLMwmyFLIYIVSSGFLFFSLWSGDSGSMKDLGSL----------KPSYKTGLSIISLLLSLGGL 246
                         170       180       190
                  ....*....|....*....|....*....|....*....
gi 1693290054 384 PFLTGFYSKDLIIESANTSytNAWALLITLIATSLTAIY 422
Cdd:MTH00144  247 PPFLGFCSKLLVLISSMES--SPLLLILLLLLGSLISLF 283
ndhD CHL00011
NADH dehydrogenase subunit 4
223-423 2.84e-06

NADH dehydrogenase subunit 4


Pssm-ID: 176954 [Multi-domain]  Cd Length: 498  Bit Score: 50.33  E-value: 2.84e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 223 KSAQFGLHPWLPSamegpTPVSAllHSST-MVVAGIFLLVRFYPLLQDNNLVLTLA--------MCLGAITTLFTAICAL 293
Cdd:CHL00011  224 KLPIIPLHTWLPD-----THGEA--HYSTcMLLAGILLKMGAYGLIRINMELLPHAhsifspwlVIVGAIQIIYAASTSL 296
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 294 TQNDIKKIVAFSTSSQLGLMMVTIG-INQPYL--AFLHICTHAFFKAMLFLCSGSI---IHNLNNEQdirkMGGLFKALP 367
Cdd:CHL00011  297 GQRNLKKRIAYSSVSHMGFIIIGIGsITDTGLngAILQIISHGFIGAALFFLAGTSydrIRLVYLDE----MGGIAIPMP 372
                         170       180       190       200       210       220
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1693290054 368 ---LTTSSLIIGSLALTGipfLTGFYSKDL----IIESANTSYTnaWALLITL---IATSLTAIYS 423
Cdd:CHL00011  373 kifTMFSSFSMASLALPG---MSGFVAELIvffgIITSQKYLLM--PKILITFvmaIGMILTPIYL 433
ND4 MTH00163
NADH dehydrogenase subunit 4; Provisional
61-317 2.99e-06

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214443 [Multi-domain]  Cd Length: 445  Bit Score: 49.77  E-value: 2.99e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  61 MVISNWHWMTTQTMKFTLSFKLDYFSLIFIPVALFVTwSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILV-TANNLFQ 139
Cdd:MTH00163   33 FLFMLLFSLSFYFSNISYFFGLDLLSFGLILLSFWIC-MLMILSSESVYKKNNYSNLFLFLILFLLIFLLLTfSSMNLLL 111
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 140 LFIGWEGVGIMSFLLI-GWWYG--RtdantaaLQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIFMINLNENTLPLLGL 216
Cdd:MTH00163  112 FYIFFESSLIPTLFLIlGWGYQpeR-------LQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSFFLLNFFGSLNFLWY 184
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 217 LLAATG---KSAQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL------LVRFYPLLQDNNLVL-TLAMCLGAITT 285
Cdd:MTH00163  185 LSMILAflvKMPMFFVHLWLPKAhVEAPV-------SGSMILAGVLLklggygLLRVMSFFSKLGLKFnYIWISISLVGG 257
                         250       260       270
                  ....*....|....*....|....*....|..
gi 1693290054 286 LFTAICALTQNDIKKIVAFSTSSQLGLMMVTI 317
Cdd:MTH00163  258 VIVSLICLRQVDLKSLIAYSSVAHMGLVLGGL 289
PRK02546 PRK02546
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
116-434 3.28e-06

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 235050 [Multi-domain]  Cd Length: 525  Bit Score: 50.09  E-value: 3.28e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 116 RFFKYLLLFLITMIILVTA-NNLFQLFIGWEGVGIMSFLLIGWWYGRtDANTAALQAVLYNRIGDVgFIL----AMAwFL 190
Cdd:PRK02546  115 KLFYFLMLAMYGGQIAVFAvQDMLLFFLAWELELIPVYLLLAIWGGK-KRQYAATKFILYTAGSSL-FILlaalAMA-FY 191
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 191 LHSNSWELQQIFM--INLNENTLPLLGLLLAATGKSAQFGLHPWLPSAM-EGPTPVSALLhsstmvvAGIFLLVRFYPLL 267
Cdd:PRK02546  192 GDTPTFDMTALAAkdFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHgEATAPVHMLL-------AGILLKMGGYALL 264
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 268 QDNNLVLTLA--------MCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFK 336
Cdd:PRK02546  265 RMNAGMLPDAhaqfapllIVLGVVNIIYAALTSFAQRNLKRKIAYSSISHMGFVLIGIGSFTDLGtsgAMLQMISHGLIG 344
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 337 AMLFLCSGSI---IHNLNNEQdirkMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTS--YTNAWALLI 411
Cdd:PRK02546  345 ASLFFLVGATydrTHTLMLDE----MGGVGQKMRKMFAMWTACSLASLALPGMSGFVAELMVFVGFATSdaYTLPFRVVV 420
                         330       340
                  ....*....|....*....|....*....
gi 1693290054 412 TLIATS---LTAIY---STRIIFFALLNQ 434
Cdd:PRK02546  421 VFLAAVgviLTPIYllsMLREIFFGPENK 449
ND4 MTH00044
NADH dehydrogenase subunit 4; Validated
43-434 9.26e-06

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214411 [Multi-domain]  Cd Length: 458  Bit Score: 48.43  E-value: 9.26e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  43 ALSTSTIPTTLYIWSGQEMVISNWHWMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFsmwymHSDPNINRFFKYLL 122
Cdd:MTH00044   27 SISQSSLISLLSLFLLNNHWSSSWHNLSLSLATDSLSSPLIILSCWLAPLSLLASINHLSN-----NSPNNQRTFISLII 101
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 123 LFLITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWELQQIF 202
Cdd:MTH00044  102 IILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSLSIPLSE 181
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 203 MINLNENTLPLLGLLLAA-----TGKSAQFGLHPWLPSA-MEGPTPVSallhsstMVVAGIFL------LVRFYPLLQDN 270
Cdd:MTH00044  182 LNWLTSLSSNSSSIWWIFcilafLVKMPIYGFHLWLPKAhVEAPVAGS-------MILAAILLklggygLIRLINLFSLP 254
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 271 -----NLVLTLAMCLGAittLFTAICALTQNDIKKIVAFSTSSQLGLMMVTI------GINQpylAFLHICTHAFFKAML 339
Cdd:MTH00044  255 sanniSFILIVFCCWGA---LITSIICLRQTDLKALIAYSSVGHMSLVAAGIfsgtnwGING---ALILMIAHGLVSSAL 328
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 340 FlCSGSIIHNLNNEQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTsyTNAWALLITLIATSLT 419
Cdd:MTH00044  329 F-CLANILYERSGTRTLSITRGFKLITPLLPLWWLIFCAANLGLPPLPNLIGELLIISSIIS--WSILSFPIIGLATVFG 405
                         410
                  ....*....|....*
gi 1693290054 420 AIYSTRIifFALLNQ 434
Cdd:MTH00044  406 AIYSLLI--YQLTNS 418
ND2 MTH00199
NADH dehydrogenase subunit 2; Provisional
230-427 6.47e-05

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177245 [Multi-domain]  Cd Length: 460  Bit Score: 45.78  E-value: 6.47e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 230 HPWLPSAMEG-PTPVSALLhsSTMVVAGIF-LLVRFYPLlqdNNLVLTLAmclgAITTLFTAICALTQNDIKKIVAFSTS 307
Cdd:MTH00199  210 HMWAPDVYEGaPTITTALL--ATVPKIGVFsILVQIGPV---TNVVLICA----VLSIIYGAIGALNQTKIKRLLAYSGI 280
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 308 SQLGLMMVTIGIN-----QPYLAFLHIcthaffKAMLFLCSGSIIHNLNNEQD-IRKMGGLFKALPLTTSSLIIGSLALT 381
Cdd:MTH00199  281 GHMGFILFGVAIGsfesiQASLIYMII------YVIMSICSFSIILSLKLTKGlIVEVSGLSRKNPVIALTLALTFLSIA 354
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1693290054 382 GIPFLTGFYSKDLIIESANTSytNAWALLITLIATSLTA-IYSTRII 427
Cdd:MTH00199  355 GIPPLAGFLSKWLILLSGVSS--GYYLICIIAVLSSVIAgVYYVRVV 399
ND4 MTH00068
NADH dehydrogenase subunit 4; Provisional
126-423 8.67e-05

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214417 [Multi-domain]  Cd Length: 458  Bit Score: 45.29  E-value: 8.67e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 126 ITMIILVTANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFL-----LHSNSWELQQ 200
Cdd:MTH00068  104 LTLILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQnslgsLSLILLELMS 183
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 201 IFMINLNENTLPLLGLLLAATGKSAQFGLHPWLPSA-MEGPTPVSallhsstMVVAGIFL------LVRFYPLLQDNNLV 273
Cdd:MTH00068  184 PMQLMTYTNKIWWLACLLAFMVKMPLYGLHLWLPKAhVEAPIAGS-------MILAAVLLklggygILRISILLTPLSKE 256
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 274 LTLAMCLGAIT-TLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFKAMLFlCSGSIIHN 349
Cdd:MTH00068  257 LSYPFIILALWgVLMTSLICLRQTDLKSLIAYSSVSHMGLVIAAALIQTPWSfsgAIILMISHGLTSSALF-CLANTNYE 335
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1693290054 350 LNNEQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESA-NTSYtnaWALLITLIATSLTAIYS 423
Cdd:MTH00068  336 RTHSRTLLLLRGAQTILPLMATWWLLSNLSNMALPPSPNLWGELTIMVSLfNWSN---WTILITGLGTLITAAYT 407
ND4 MTH00205
NADH dehydrogenase subunit 4; Provisional
76-317 2.11e-04

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214457 [Multi-domain]  Cd Length: 448  Bit Score: 44.20  E-value: 2.11e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  76 FTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLFIGWEGVGIMSFLLI 155
Cdd:MTH00205   49 ISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFTVSVIMLLLILILSFSVDNLLLFYITFEASLIPTLILI 128
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 156 GWWYGRTDANTAALQAVLYNRIGDvgFILAMAWFLLHSNSWELQQIFMINLNENTLPLLGLLLAATG----KSAQFGLHP 231
Cdd:MTH00205  129 LGWGYQPERLQASMYMMMYTLCAS--LPLLIGLFFLNSLNFSLSMFFNFPLNFSDFYLFLYWIFLMLaflvKLPMYFVHL 206
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 232 WLPSA-MEGPTpvsallhSSTMVVAGIFL------LVRFYPLLQDNN-LVLTLAMCLGAITTLFTAICALTQNDIKKIVA 303
Cdd:MTH00205  207 WLPKAhVEAPV-------SGSMILAGVLLklggygLIRITSMLYKLNsNFSELFFSISLWGGVMTGMICLRQVDLKSLIA 279
                         250
                  ....*....|....
gi 1693290054 304 FSTSSQLGLMMVTI 317
Cdd:MTH00205  280 YSSVGHMGLMVVGV 293
ND2 MTH00041
NADH dehydrogenase subunit 2; Validated
183-422 2.19e-04

NADH dehydrogenase subunit 2; Validated


Pssm-ID: 177116 [Multi-domain]  Cd Length: 349  Bit Score: 43.77  E-value: 2.19e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 183 ILAMAWFllhSNSWelqqifMINLNENTLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVR 262
Cdd:MTH00041   74 ALIQAWL---SGSW------SINGPLNTLSSIIITLALALKLGLAPCHFWFPDVLQGLPFLQGLIIATWQKIAPLILLIS 144
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 263 FypllqDNNLVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINqPYLAFLHICTHAFFKAMLFLc 342
Cdd:MTH00041  145 I-----SNLLNSNILILCGILSVLVGGWGGLNQTQTRKILAFSSIAHLGWIIITSAYS-PNASIIMFLIYIIINTSIFL- 217
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 343 sgsiIHNLNNEQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESanTSYTNAWALLITLIATSLTAIY 422
Cdd:MTH00041  218 ----IGNNFSLSTLSHLNKLSQLNPISAFLFILSILSLGGLPPLTGFLNKFISLYC--LIQNNSILISIILIIGSLLSLF 291
ND2 MTH00070
NADH dehydrogenase subunit 2; Provisional
229-397 2.37e-04

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177142 [Multi-domain]  Cd Length: 346  Bit Score: 43.76  E-value: 2.37e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 229 LHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQdnnlvLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSS 308
Cdd:MTH00070  111 FHFWLPEVLQGLDLTTGLILSTWQKLAPMALLIQISHLLN-----SNLLIIMGLLSTLIGGWGGLNQTQLRKIMAYSSIA 185
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 309 QLGLMMVTIGINqPYLAFLH-----ICTHAFFKAMLFLcsgsiihnlnNEQDIRKMGGLFKALPLTTSSLIIGSLALTGI 383
Cdd:MTH00070  186 HLGWMIIILTFS-PHLTLLNlliylIMTSSMFLMLMNL----------NSTNINKLSSSWSKNPTLTSMMMLTLLSLGGL 254
                         170
                  ....*....|....
gi 1693290054 384 PFLTGFYSKDLIIE 397
Cdd:MTH00070  255 PPTTGFIPKWLILQ 268
ND4 MTH00150
NADH dehydrogenase subunit 4; Provisional
115-313 4.58e-04

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214435 [Multi-domain]  Cd Length: 417  Bit Score: 42.90  E-value: 4.58e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 115 NRFFKYLLLFLITMIILVTA---NNLFQLFIGWEGVGI-MSFLLIGWWYG--RtdantaaLQAVLYNRIGDVG------F 182
Cdd:MTH00150   52 NKSSSFSLLVLLLCLILVLAfsvSSLLMFYFFFEASLIpTLLLILGWGYQpeR-------LQAGMYMMLYTVGaslpllL 124
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 183 ILAMAWFLLHSNSWELQQIFMINLNENTLPLLGLLLAATGKSAQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGIFL-- 259
Cdd:MTH00150  125 VILWMSSSYGSSFMLLISSLRKLLSSMGLWGLLVFLAFLVKLPMYPFHLWLPKAhVEAPV-------AGSMILAGILLkl 197
                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1693290054 260 ----LVRFYPLLQDNN-LVLTLAMCLGAITTLFTAICALTQNDIKKIVAFSTSSQLGLM 313
Cdd:MTH00150  198 ggygILRMMMVFSLSSsSFSIFLISLSLWGGVLTSLICLRQSDVKSLIAYSSVGHMSLV 256
ND4 MTH00014
NADH dehydrogenase subunit 4; Validated
62-321 9.85e-04

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214399 [Multi-domain]  Cd Length: 452  Bit Score: 42.03  E-value: 9.85e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054  62 VISNWHWMTTQTMKFTLSFKLDYFSLIFIPVALFVTWSIMEFSMWYMHSDPNINRFFKYLLLFLITMIILVTANNLFQLF 141
Cdd:MTH00014   37 TLLNLYPMSAPYSMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLLTFSASNLLMFY 116
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 142 IGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMAWFLLHSNSWelqQIFMINLNENTLPLL-----GL 216
Cdd:MTH00014  117 IFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSL---SMLMSSMEPPSIYLMnlwwlIT 193
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 217 LLAATGKSAQFGLHPWLPSA-MEGPTpvsallhSSTMVVAGIFLLVRFYPLLQDNNLVLTLAMCLGAITT-------LFT 288
Cdd:MTH00014  194 ILAFMVKMPLYTVHLWLPKAhVEAPV-------AGSMILAGILLKLGGYGLLRMSSLFMHINKSLSAPFSsislvgaVIT 266
                         250       260       270
                  ....*....|....*....|....*....|...
gi 1693290054 289 AICALTQNDIKKIVAFSTSSQLGLMMVTIGINQ 321
Cdd:MTH00014  267 SLICIRQPDLKSLIAYSSVGHMGLMTAGIMSNT 299
ND2 MTH00011
NADH dehydrogenase subunit 2; Validated
230-422 1.23e-03

NADH dehydrogenase subunit 2; Validated


Pssm-ID: 164587 [Multi-domain]  Cd Length: 330  Bit Score: 41.30  E-value: 1.23e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 230 HPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPLLQDNNLVLtlamcLGAITTLFTAICALTQNDIKKIVAFSTSSQ 309
Cdd:MTH00011  108 HFWFPSVMSSISWTLCLILSTWQKIAPLSILFFFTSHNILPMMTS-----MAAMSALAGGLGGMNQTQLRPLLAYSSIGH 182
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 310 LGLMMVtIGINQPYLAFLHICTHAFFKAMLFlcsgsIIHNLNNEQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGF 389
Cdd:MTH00011  183 MGWMTM-ISVFSPSMAILYFMTYIIITTPLM-----LLFAYLNAFSTKFNSKISSMSQTTSMSLFIMLLSLGGLPPFTGF 256
                         170       180       190
                  ....*....|....*....|....*....|...
gi 1693290054 390 YSKDLIIESANTSYTNAWalLITLIATSLTAIY 422
Cdd:MTH00011  257 MPKLMAIETLTSNSMILI--LLVLIVGSLMNLF 287
ND4 MTH00127
NADH dehydrogenase subunit 4; Provisional
113-423 1.54e-03

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177186 [Multi-domain]  Cd Length: 459  Bit Score: 41.48  E-value: 1.54e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 113 NINRFFKYLLLFLITMIILV-TANNLFQLFIGWEGVGIMSFLLIGWWYGRTDANTAALQAVLYNRIGDVGFILAMawfLL 191
Cdd:MTH00127   91 NRQRMYITLLTSLQIFLILAfGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVAL---LL 167
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 192 HSNSWELQQIFMINLNENTLPLLGLLLAATG--------KSAQFGLHPWLPSA-MEGPTPVSALLHSSTMVVAG---IFL 259
Cdd:MTH00127  168 LQNSTGTLSMLTLQYSQPLQLSSWADKLWWAgcllaflvKMPLYGVHLWLPKAhVEAPIAGSMVLAAVLLKLGGygmMRM 247
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 260 LVRFYPLLQDNNLVLTLAMCLGAITTlfTAICaLTQNDIKKIVAFSTSSQLGLMMVTIGINQPYL---AFLHICTHAFFK 336
Cdd:MTH00127  248 MVMLDPLTKELSYPFIILALWGIIMT--GSIC-LRQTDLKSLIAYSSVSHMGLVAGGILIQTPWGftgALILMIAHGLTS 324
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 337 AMLFlCSGSIIHNLNNEQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESA-NTSYtnaWALLITLIA 415
Cdd:MTH00127  325 SALF-CLANTNYERTHSRTMLLARGLQMILPLMATWWFIASLANLALPPLPNLMGELMIITSLfNWSP---WTLALTGLG 400

                  ....*...
gi 1693290054 416 TSLTAIYS 423
Cdd:MTH00127  401 TLITAGYS 408
ND2 MTH00160
NADH dehydrogenase subunit 2; Provisional
201-432 8.04e-03

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 214442 [Multi-domain]  Cd Length: 335  Bit Score: 38.65  E-value: 8.04e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 201 IFMINLNENTLPLLGLLLAATGKSAQFGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFYPllqdNNLVLTLAMcl 280
Cdd:MTH00160   78 NMLNLMLFNNISSMLINSSLLLKLGAAPFHFWFPEVMEGLSWINCFILMTWQKIAPLILLSYLIN----NNFIIIIII-- 151
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 281 gaITTLFTAICALTQNDIKKIVAFSTSSQLGLMMVTIGINQPYLAFLhicthaFFKAMLFLCSGSIIHNLNNEQDIRKMG 360
Cdd:MTH00160  152 --LSAIIGAIGGLNQTSLRKILAYSSINHLGWMLSSMMISENLWLIY------FLIYSIISLSIILLFNKFNIFFLNQLF 223
                         170       180       190       200       210       220       230
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1693290054 361 GLFKALPLTTSSLIIGSLALTGIPFLTGFYSKDLIIESANTSYTNAWaLLITLIATSLTAIYSTRIIFFALL 432
Cdd:MTH00160  224 NSNNKSKKIKFLLFLNLLSLGGLPPFLGFLPKWIIIQLLISNNMFFL-LFILIMSSLITLYFYLRISYSSLM 294
ND2 MTH00197
NADH dehydrogenase subunit 2; Provisional
227-433 9.53e-03

NADH dehydrogenase subunit 2; Provisional


Pssm-ID: 177244 [Multi-domain]  Cd Length: 323  Bit Score: 38.50  E-value: 9.53e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 227 FGLHPWLPSAMEGPTPVSALLHSSTMVVAGIFLLVRFypllqdNNLVLTLAMClGAITTLFTAICALTQNDIKKIVAFST 306
Cdd:MTH00197   96 FPFHFWVPSVMESLSWFNCFLLATWQKLAPLLILAFN------SSSFMGLLIC-SVLSSLIGGIGGMNQSNIRQLLAYSS 168
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290054 307 SSQLGLMMVTIGINQPYLAFLHIcthAFFKAMLFLCSgsiIHNLNNEQDIRKMGGLFKALPLTTSSLIIGSLALTGIPFL 386
Cdd:MTH00197  169 IGHTGWMLMSLVYSPSIFMLYYL---IYFVIMFMLFL---FLSKNNLSSLNQQYSNPESMSSNLVFLGLSFLSLGGLPPL 242
                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....*..
gi 1693290054 387 TGFYSKDLIIESANTSYTNAWALLITlIATSLTAIYSTRIIFFALLN 433
Cdd:MTH00197  243 SGFFLKWLILTSLLSSNISLITFMLI-LSTCFSLYYYLSLAYKSLIL 288
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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