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Conserved domains on  [gi|1693290059|ref|YP_009651539|]
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NADH dehydrogenase subunit 1 (mitochondrion) [Megatherium americanum]

Protein Classification

NADH dehydrogenase subunit 1( domain architecture ID 10009566)

NADH dehydrogenase subunit 1 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that functions in the transfer of electrons from NADH to the respiratory chain

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


:

Pssm-ID: 177166  Cd Length: 318  Bit Score: 537.67  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059   1 MLPMNILCLIIPILLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALT 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  81 LALSLWIPLPMPYPLINLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSY 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 161 TLSTLTTTQEQMWLILPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTT 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1693290059 241 LFFGSFHSPLLPELHTINFTTKTLILTTTFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHVAAPISFAIIPPQT 318
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 537.67  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059   1 MLPMNILCLIIPILLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALT 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  81 LALSLWIPLPMPYPLINLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSY 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 161 TLSTLTTTQEQMWLILPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTT 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1693290059 241 LFFGSFHSPLLPELHTINFTTKTLILTTTFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHVAAPISFAIIPPQT 318
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
NADHdh pfam00146
NADH dehydrogenase;
16-303 1.40e-111

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 325.58  E-value: 1.40e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  16 AVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALTLALSLWIPLPMPYPL 95
Cdd:pfam00146  12 AVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGL 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  96 I--NLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSYTLSTLTTTQEQMW 173
Cdd:pfam00146  92 VlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGW 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 174 LILPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTTLFFGSFHSPLLPe 253
Cdd:pfam00146 172 FIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLGPFPL- 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1693290059 254 LHTINFTTKTLILTTTFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMW 303
Cdd:pfam00146 251 PGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 16-303 8.41e-102

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 301.66  E-value: 8.41e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  16 AVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALTLALSLWIPLPM--PY 93
Cdd:COG1005    25 LAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFgpGL 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  94 PLINLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSYTLSTLTTTQEQ-M 172
Cdd:COG1005   105 VLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAGgL 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 173 WLILPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTTLFFGSFHSPLLP 252
Cdd:COG1005   185 WFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFPI 264

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1693290059 253 ELHT-----INFTTKTLILTTTFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMW 303
Cdd:COG1005   265 LPLGglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
 
Name Accession Description Interval E-value
ND1 MTH00104
NADH dehydrogenase subunit 1; Provisional
 1-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177166  Cd Length: 318  Bit Score: 537.67  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059   1 MLPMNILCLIIPILLAVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALT 80
Cdd:MTH00104    1 MFMINILLLIIPILLAVAFLTLVERKVLGYMQLRKGPNIVGPYGLLQPFADAMKLFTKEPLRPLTSSTTMFIIAPILALT 80

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  81 LALSLWIPLPMPYPLINLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSY 160
Cdd:MTH00104   81 LALTMWIPLPMPYPLINMNLGVLFILAMSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSVLLMNGSF 160

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 161 TLSTLTTTQEQMWLILPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTT 240
Cdd:MTH00104  161 TLSTLITTQEHLWLIFPSWPLAMMWFISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIIMMNALTTI 240

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1693290059 241 LFFGSFHSPLLPELHTINFTTKTLILTTTFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHVAAPISFAIIPPQT 318
Cdd:MTH00104  241 LFLGAFHNPYMPELYTTNFTIKTLLLTILFLWIRASYPRFRYDQLMHLLWKNFLPLTLALCMWHISLPIMTASIPPQT 318
ND1 MTH00111
NADH dehydrogenase subunit 1; Provisional
 16-318 0e+00

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214422  Cd Length: 323  Bit Score: 502.89  E-value: 0e+00
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  16 AVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALTLALSLWIPLPMPYPL 95
Cdd:MTH00111   21 AVAFLTLLERKILGYMQLRKGPNIVGPFGLLQPIADGVKLFIKEPIRPSTSSPILFTLTPILALLLALTIWTPLPMPFPL 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  96 INLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSYTLSTLTTTQEQMWLI 175
Cdd:MTH00111  101 ADLNLGLLFLLAMSSMAVYSILWSGWASNSKYALMGALRAVAQTISYEVTLGIILLSLILLSGGYTLQTLATTQEPLWLI 180

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 176 LPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTTLFFGSFHSPLLPELH 255
Cdd:MTH00111  181 FSSWPLAMMWYISTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFLAEYANILLMNTLTTILFLNPSTLNLPPELF 260

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1693290059 256 TINFTTKTLILTTTFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHVAAPISFAIIPPQT 318
Cdd:MTH00111  261 TINLMTKTLLLTSGFLWIRASYPRFRYDQLMHLLWKQFLPLTLALCLWHTSMPISLAGLPPQL 323
ND1 MTH00071
NADH dehydrogenase subunit 1; Provisional
 16-317 4.18e-174

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214418  Cd Length: 322  Bit Score: 484.89  E-value: 4.18e-174
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  16 AVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALTLALSLWIPLPMPYPL 95
Cdd:MTH00071   21 AVAFLTLVERKVLGYMQLRKGPNIVGPMGLLQPIADGLKLFIKEPIRPSTSSQILFILMPTMALTLALIIWTPLPMPNNL 100

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  96 INLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSYTLSTLTTTQEQMWLI 175
Cdd:MTH00071  101 SNLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVTLGLILLCLILLTGGFSLMNFNTTQEFMWLI 180

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 176 LPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTTLFFGSFHSPLLPELH 255
Cdd:MTH00071  181 IPAWPMAAMWFISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILMMNTLSTILFLGSTYNHLQPELS 260

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1693290059 256 TINFTTKTLILTTTFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHVAAPISFAIIPPQ 317
Cdd:MTH00071  261 TMNLMIKASILSMLFLWVRASYPRFRYDQLMHLVWKNFLPITLAMTIFHISLPISTLGIPPM 322
ND1 MTH00134
NADH dehydrogenase subunit 1; Provisional
 16-318 6.73e-174

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177192  Cd Length: 324  Bit Score: 484.49  E-value: 6.73e-174
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  16 AVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALTLALSLWIPLPMPYPL 95
Cdd:MTH00134   22 AVAFLTLLERKVLGYMQLRKGPNIVGPYGLLQPIADGVKLFIKEPVRPSTSSPFLFLATPMLALTLALTLWAPMPMPYPV 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  96 INLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSYTLSTLTTTQEQMWLI 175
Cdd:MTH00134  102 TDLNLGILFILALSSLAVYSILGSGWASNSKYALIGALRAVAQTISYEVSLGLILLSVIIFTGGFTLQTFNTAQESIWLL 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 176 LPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTTLFFGSFHSPLLPELH 255
Cdd:MTH00134  182 LPAWPLAAMWYISTLAETNRAPFDLTEGESELVSGFNVEYAGGPFALFFLAEYANILLMNTLSAILFLGASHIPTLPELT 261

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1693290059 256 TINFTTKTLILTTTFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHVAAPISFAIIPPQT 318
Cdd:MTH00134  262 TINLMTKAALLSVVFLWVRASYPRFRYDQLMHLVWKNFLPLTLALVIWHLALPIAFAGLPPQL 324
ND1 MTH00218
NADH dehydrogenase subunit 1; Provisional
 16-316 1.70e-141

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214463  Cd Length: 311  Bit Score: 401.98  E-value: 1.70e-141
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  16 AVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALTLALSLWIPLPMPYPL 95
Cdd:MTH00218   18 AVAFLTLLERKVLGYMQLRKGPNVVGPYGLLQPIADGVKLFIKEPIRPSTSSPFLFLLAPILALTLALLLWMPLPLPFSL 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  96 INLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSYTLSTLTTTQEQMWLI 175
Cdd:MTH00218   98 INLNLGVLFILAISSLGVYSILWSGWASNSKYALMGALRAVAQTISYEVSLGLIILSLIILTGGFSLEGFNLTQETIWLL 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 176 LPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTTLFFGSFHSpllpelh 255
Cdd:MTH00218  178 IPEWPLALMWFISTLAETNRAPFDLTEGESELVSGFNVEYSGGPFALFFLAEYMNILFMNTLSVILFLGTSLT------- 250

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1693290059 256 TINFTTKTLILTTTFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHVAAPISFAIIPP 316
Cdd:MTH00218  251 TINLMLKATLLVFLFLWVRASLPRFRYDQLMHLAWKNFLPLSLALLLLHTSLPLSFASLPP 311
ND1 MTH00040
NADH dehydrogenase subunit 1; Validated
 16-316 1.49e-134

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 214409  Cd Length: 323  Bit Score: 384.71  E-value: 1.49e-134
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  16 AVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALTLALSLWIPLPMPYPL 95
Cdd:MTH00040   20 AVAFLTLVERKVLGYMQFRKGPNVVGPYGLLQPFADGLKLFIKETLKPSNASPYLFFFSPVLFLFLALLLWSLIPVPTPT 99

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  96 INLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSYTLSTLTTTQEQMWLI 175
Cdd:MTH00040  100 LNVNLSLLLVLGLSSLSVYALLGSGWASNSKYSLLGAIRAVAQTISYEISLGLILLSLVIFSGSFSLSSISNSQNGSWLL 179

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 176 LPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTTLFFG--SFHSPLLPe 253
Cdd:MTH00040  180 FPCLPLFYIWFISTLAETNRAPFDLTEGESELVSGYNVEYAGGPFALFFIAEYANIIFMNLLSVILFLGggSPFNEIFP- 258

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1693290059 254 LHTINFTTKTLILTTTFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHVAAPISFAIIPP 316
Cdd:MTH00040  259 INIIIVGIKTTFLVFLFLWVRASYPRFRYDQLMFLTWKNYLPLSIGLLIFYLLLLSLLNILPP 321
ND1 MTH00195
NADH dehydrogenase subunit 1; Provisional
 16-311 1.42e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214452  Cd Length: 307  Bit Score: 330.94  E-value: 1.42e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  16 AVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALTLALSLWIPLPMPYPL 95
Cdd:MTH00195   18 AVAFFTLLERKILGYIQLRKGPNKVGPYGLLQPIADAVKLFIKEPVKPSTSSLWLFFFAPVLALALALILWVPIPSPFGF 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  96 INLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSYTLSTLTTTQEQMWLI 175
Cdd:MTH00195   98 SSINLSVLFFLCVSSLSVYSILGSGWASNSKYALLGAIRAVAQTISYEVSMGLIILCPICLAGSFDFTIMVISQGFSWVI 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 176 LPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTTLFFGSFHSPLLpelh 255
Cdd:MTH00195  178 LLCPPISFMWYVSTLAETNRAPFDFAEGESELVSGFNVEYAGGPFALIFMAEYSNIIFMSVLTTILFLGGGGTIIV---- 253

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1693290059 256 tinfTTKTLILTTTFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHVAAPISF 311
Cdd:MTH00195  254 ----ALKSLFLSFCFLWVRGSLPRFRYDQLMHLTWKCYLPLILSLLIPLAAIPFAL 305
ND1 MTH00143
NADH dehydrogenase subunit 1; Provisional
 16-302 4.80e-113

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177201  Cd Length: 307  Bit Score: 329.52  E-value: 4.80e-113
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  16 AVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALTLALSLWIPLPMPYPL 95
Cdd:MTH00143   17 AVAFFTLLERKGLGYFQIRKGPNKVGLMGLPQPLADAVKLFTKEFVKPTMSNKFPFFLAPCLSLILALLLWQLYPSYFSS 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  96 INLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSYTLSTLTTTQEQMWLI 175
Cdd:MTH00143   97 SYFGWGLLFFLCVSSLNVYGVLLAGWSSNSKYALLGAVRAVAQTISYEVSMSLILLFPLFLSGSFSFIEISESQFSVWLG 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 176 LPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTTLFFGSfhSPLLPELH 255
Cdd:MTH00143  177 FLMFPVFLMWFVSCLAETNRAPFDFAEGESELVSGFNVEYGGGGFALLFLAEYANILFMSLLTVVLFFGG--SSVLFLLG 254

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1693290059 256 TINFTTKTLILTTTFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCM 302
Cdd:MTH00143  255 GVVFMFKVLFFAFLFIWVRASYPRFRYDLLMMLCWKSFLPFSLSILV 301
NADHdh pfam00146
NADH dehydrogenase;
16-303 1.40e-111

NADH dehydrogenase;


Pssm-ID: 459690  Cd Length: 302  Bit Score: 325.58  E-value: 1.40e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  16 AVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALTLALSLWIPLPMPYPL 95
Cdd:pfam00146  12 AVAFLTWAERKVLARMQRRIGPNRVGPFGLLQPFADALKLLFKEDIIPAGADKFLFLLAPIIAFIPALLAFAVIPFGPGL 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  96 I--NLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSYTLSTLTTTQEQMW 173
Cdd:pfam00146  92 VlaDLNVGILYILALSSLGVYGILLAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLSLSEIVEAQAGGW 171

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 174 LILPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTTLFFGSFHSPLLPe 253
Cdd:pfam00146 172 FIPLQPLAFIVFFIAALAETNRAPFDLPEAESELVAGFHTEYSGMRFALFFLAEYANMFLMSALAVTLFLGGWLGPFPL- 250

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1693290059 254 LHTINFTTKTLILTTTFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMW 303
Cdd:pfam00146 251 PGLLWFLLKVFFVFFLFIWIRATLPRFRYDQLMRLGWKVLLPLSLANLLL 300
ND1 MTH00193
NADH dehydrogenase subunit 1; Provisional
 16-302 7.37e-111

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177241  Cd Length: 306  Bit Score: 324.03  E-value: 7.37e-111
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  16 AVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALTLALSLWIPLPMPYPL 95
Cdd:MTH00193   18 SVAFLTLLERKVLGYIQIRKGPNKVGFMGILQPFSDAIKLFTKEQTYPLMSNYLLYYFSPVFSLFLSLLIWLIYPYLFNL 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  96 INLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSYTLSTLTTTQEQMWLI 175
Cdd:MTH00193   98 ISFNLGILFFLCCSSLGVYTVMIAGWSSNSKYSLLGSLRSVAQTISYEVSLALILLSFIFLIGSFNLLDFMNYQKYIWFI 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 176 LPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTTLFFGSfhspllpELH 255
Cdd:MTH00193  178 FFSFPLFLIWFVSCLAETNRTPFDFAEGESELVSGFNVEYSSGGFALIFLAEYSSILFMSMLFVLMFLGG-------DLL 250

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1693290059 256 TINFTTKTLILTTTFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCM 302
Cdd:MTH00193  251 SLLFYLKLLFISFLFIWVRGTLPRFRYDKLMYLAWKSFLPLSLNYLL 297
ND1 MTH00225
NADH dehydrogenase subunit 1; Provisional
 16-299 3.62e-103

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 214465  Cd Length: 305  Bit Score: 304.27  E-value: 3.62e-103
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  16 AVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALTLALSLWIPLPMPYPL 95
Cdd:MTH00225   17 SVAFYTLLERKVLGYIQLRKGPNKVGLMGLPQPFADALKLFTKEQTKPQLSNKLPYYIAPILSLILSLILWSLYPSMFSI 96

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  96 INLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSYTLSTLTTTQEQMWLI 175
Cdd:MTH00225   97 YSFKFGILFFLCISSLNVYTILLAGWSSNSKYALLGALRAVAQTISYEVSMALILLSIVFLVLTYNLFDFSYNQKYFWFM 176

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 176 LPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTTLFFGSfhsplLPELH 255
Cdd:MTH00225  177 FVLFPLFFCWMISMLAETNRAPFDFAEGESELVSGFNIEYSSGGFALIFMAEYGSILFMSMLTSILFFGG-----FFVTI 251

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....
gi 1693290059 256 TINFTTKTLILTTTFLWVRASYPRFRYDQLMHLLWKSFLPLTLA 299
Cdd:MTH00225  252 DLFLILKIMLLAFWFIWVRGVLPRMRYDKLMSLTWKSFLPLSLA 295
ND1 MTH00054
NADH dehydrogenase subunit 1; Provisional
 16-316 2.64e-102

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177127  Cd Length: 324  Bit Score: 302.80  E-value: 2.64e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  16 AVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALTLALSLW--IPLPMPY 93
Cdd:MTH00054   18 SIAYLTLAERKVLGYIQCRKGPNVVGVYGLLQPLADGLKLFTKEIIIPNHANIFIYIMAPILSLTLAFIAWgvIPYGEGV 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  94 PLINLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSYTLSTLTTTQEQMW 173
Cdd:MTH00054   98 VLSDLGIGILYLFAVSSISVYAVLMSGWSSNSKYAFLGAIRAAAQMISYEVSIGLIIISVVLCVGSLNLTEIVLAQKNIW 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 174 LILPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTTLFFGSFHSPLLPE 253
Cdd:MTH00054  178 FIFPLFPAAIMFFVSALAETNRVPFDLTEGESELVSGFNVEYSSMSFALFFLAEYCHIILMSTFGVILFLGGWLVISGPT 257

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1693290059 254 LHTINFTTK---TLILTTTFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHVAAPISFAIIPP 316
Cdd:MTH00054  258 SYFSNFVWFgikIALIIFLFIWIRASYPRIRYDQLMALLWKSYLPLSLAFVVLVSGILIGFNALPP 323
NuoH COG1005
NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH: ...
 16-303 8.41e-102

NADH:ubiquinone oxidoreductase subunit 1 (chain H) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 1 (chain H) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440629  Cd Length: 329  Bit Score: 301.66  E-value: 8.41e-102
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  16 AVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALTLALSLWIPLPM--PY 93
Cdd:COG1005    25 LAAYLTWAERKVLARMQDRIGPNRVGPFGLLQPLADGLKLLFKEDIIPAGADKFLFLLAPILAFIPALLAFAVIPFgpGL 104

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  94 PLINLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSYTLSTLTTTQEQ-M 172
Cdd:COG1005   105 VLADLNVGLLYVLAVSSLGVYGIILAGWASNNKYSLLGALRAAAQMISYEIPLGLSLLGVVLLAGSLNLSEIVEAQAGgL 184

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 173 WLILPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTTLFFGSFHSPLLP 252
Cdd:COG1005   185 WFILPQPLAFVVFFIAALAETNRAPFDLPEAESELVAGYHTEYSGMKFALFFLAEYANMFLVSALATTLFLGGWLGPFPI 264

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|....*.
gi 1693290059 253 ELHT-----INFTTKTLILTTTFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMW 303
Cdd:COG1005   265 LPLGglpgiLWFLLKTLFFIFFFIWVRATLPRYRYDQLMRLGWKVLLPLSLVNLVL 320
ND1 MTH00216
NADH dehydrogenase subunit 1; Provisional
 16-316 2.41e-100

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 164761  Cd Length: 327  Bit Score: 298.19  E-value: 2.41e-100
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  16 AVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALTLALSLW--IPLPMPY 93
Cdd:MTH00216   22 AVAYLTLAERKVLGYMQARKGPNVVGVYGLLQPFADGVKLFTKEMVIPHHANLFVYIVAPVLSFTLALIVWgvIPYERGV 101

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  94 PLINLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSYTLSTLTTTQEQ-M 172
Cdd:MTH00216  102 LISDFKIGILYILAISSISVYAILMSGWGSNSKYAFLGAIRAAAQMISYEVSIGLIIISVLLCVGSLSITEIVLAQNNgI 181

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 173 WLILPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTTLFFGSFHSPLLP 252
Cdd:MTH00216  182 WFFFPLFPVAIMFFASALAETNRAPFDLTEGESELVSGYNVEYASMSFALFFLAEYAHIILMSCLTTILFLGGWLSPIKY 261

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1693290059 253 -ELHTINFTTKTLILTTTFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHVAAPISFAIIPP 316
Cdd:MTH00216  262 fKGGAGWFGLKVVFIIFLFIWVRASFPRIRYDQLMALLWKSYLPLSLGVVIFVASVLFGFNGPPP 326
PRK06076 PRK06076
NADH-quinone oxidoreductase subunit NuoH;
17-303 5.91e-97

NADH-quinone oxidoreductase subunit NuoH;


Pssm-ID: 235692  Cd Length: 322  Bit Score: 289.01  E-value: 5.91e-97
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  17 VAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALTLALSLWIPLPM--PYP 94
Cdd:PRK06076   27 VAFLIWFERKVLARMQLRYGPNRVGPFGLLQLVADGIKLLFKEDIIPAGADKVLFLLAPVIAFIPAFLAWAVIPFgpELV 106

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  95 LINLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSYTLSTLTTTQEQMWL 174
Cdd:PRK06076  107 IADLNVGILYILAISSLGVYGVILAGWASNNKYALLGALRAAAQMISYEVPLGLSLLAVVLLAGSLNLSDIVEAQFLSWN 186

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 175 ILPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTTLFFGSFHSPLLPEL 254
Cdd:PRK06076  187 IIPQPPAFVVFFIAAVAETNRHPFDLPEAESELVAGYHTEYSGMKFGLFFLGEYINMILVSALITTLFLGGWLPPFPLGG 266

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1693290059 255 HT---INFTTKTLILTTTFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMW 303
Cdd:PRK06076  267 GIpgaIWFVLKVAFFVFLFIWLRATLPRYRYDQLMRLGWKVLLPLSLVNLLL 318
ND1 MTH00029
NADH dehydrogenase subunit 1; Provisional
 16-316 1.40e-87

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177108  Cd Length: 343  Bit Score: 266.11  E-value: 1.40e-87
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  16 AVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALTLALSLWIPLPMPYP- 94
Cdd:MTH00029   23 SVAYLTLAERKVLGLMQNRKGPAIVGPWGLVQPIADGVKLLTKELIIPSQANKFLYYIAPIISFTLAILAWAIVTMDQGv 102

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  95 -LINLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSYTLSTLTTTQEQMW 173
Cdd:MTH00029  103 fLSDLDVGVLYFLAISSLSVYAILLSGWASNSRYPFLGAIRCAAQMISYEVAIGLIIISVILCVGSLNISEIVISQRSVW 182

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 174 LILPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTTLFFGSFHSPLLPE 253
Cdd:MTH00029  183 LIIPLFPAAIMFMVASLAETARAPFDLTEGESELVSGFNVEYSSLSFALFFLAEYSNIILMSCMMTIFFLGGWLSPLDGI 262

                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1693290059 254 LHTINFTTKTLILTTTFL----------------WVRASYPRFRYDQLMHLLWKSFLPLTLAMCMWHVAAPISFAIIPP 316
Cdd:MTH00029  263 PTPPEAFSIFEQIASSKSsfwfftkssifilffiWSRASFPRIRYDQLMKLLWKTYLPLSLGLVILTAGILIGFNGVPP 341
ND1 MTH00010
NADH dehydrogenase subunit 1; Validated
 16-302 5.14e-86

NADH dehydrogenase subunit 1; Validated


Pssm-ID: 164586  Cd Length: 311  Bit Score: 260.87  E-value: 5.14e-86
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  16 AVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALTLALSLWIPLPMPYPL 95
Cdd:MTH00010   19 AMAFYTLLERKALGYFQLRKGPNKVGLAGIPQPFADAIKLFTKEQTKPSPANITPFLGAPMMSLILALLLWSLYPHKHPS 98

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  96 INLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSiMLMNGSYTLSTLTTTQEQMWLI 175
Cdd:MTH00010   99 FFLKFSILLFLCVSSMNVYTTLGAGWTSNSKYALLGALRSVAQTISYEVSMSLILLS-ALLILQTFSFSKIIMSQYSWIL 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 176 LPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTTLFFGSFHSPLLPELH 255
Cdd:MTH00010  178 LMIIPLTVSWFITNLAETNRTPFDFAEGESELVSGFNVEYSSGLFALIFMAEYANILIMSLFTSVFFTSFIPSIFISDLM 257

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1693290059 256 TInftTKTLILTTTFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCM 302
Cdd:MTH00010  258 LI---LKTVFLAFLFIWIRATFPRMRYDRLMNLTWKSFLPMSLTSLM 301
ND1 MTH00090
NADH dehydrogenase subunit 1; Provisional
 16-302 1.27e-63

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177153  Cd Length: 284  Bit Score: 202.82  E-value: 1.27e-63
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  16 AVAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALTLALSLWIPLPMPYPL 95
Cdd:MTH00090   12 AIAFITLYERHLLGSSQNRLGPNKVSFMGVLQALLDGVKLLKKEQMLPLNSSDLSFLLVPGVSFVVMYLEWFVLPYFFDF 91

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  96 INLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGsytlsTLTTTQEQMWLI 175
Cdd:MTH00090   92 LSFEYSLLFFLCLIGFSVYTTLISGIVSKSKYGFLGALRASSQSISYEIAFSLYLLSIMLHNN-----SFSFVSSFSLSL 166

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 176 LPTWplaMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTTLFFGSfhspllpelh 255
Cdd:MTH00090  167 FVIY---LPFLIMIIAELNRAPFDFSEGESELVSGYNVEYSSVAFVLLFLSEYGSLIFFSVLTSVLFFKF---------- 233

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|....*..
gi 1693290059 256 tinFTTKTLILTTTFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCM 302
Cdd:MTH00090  234 ---SFLMLFLIFSLLIFIRSSYPRFRYDMMMSMFWFKFLPLSLIFLG 277
ND1 MTH00058
NADH dehydrogenase subunit 1; Provisional
 17-298 4.79e-47

NADH dehydrogenase subunit 1; Provisional


Pssm-ID: 177130  Cd Length: 293  Bit Score: 160.09  E-value: 4.79e-47
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  17 VAFLTLVERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALTLALSLWIPLPMPYPLI 96
Cdd:MTH00058   18 VAFFILGERKILGYIQLRKGPNKVGIVGLLQSFADLLKLVVKFKVYGFQSRSWFSLFGVFLLVLLVVFYCFIYGSYYSGS 97

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  97 NLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSYTLSTLTTTQEQMWLIL 176
Cdd:MTH00058   98 YSSLSLLWFLVVTSFSSYSLLCVGWGSYNKYSLLSSIRSAFGSVSFEACFMCIVIFCGLCYGSYSLVDFYYSGWLSVLLF 177

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 177 PtwPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTTLFFGSFHSPLLPELHT 256
Cdd:MTH00058  178 P--LIYILWLVCILCETNRTPFDYGESESELVSGFNTEYSGIYFTCLFACEYLIIFIFSWLGSVLFFGGGFVSIMLLFHL 255

                         250       260       270       280
                  ....*....|....*....|....*....|....*....|..
gi 1693290059 257 InfttktlilttTFLWVRASYPRFRYDQLMHLLWKSFLPLTL 298
Cdd:MTH00058  256 L-----------FFMWARATLPRVRYDYFVNFFWEYCLVLLI 286
ndhA CHL00032
NADH dehydrogenase subunit 1
 24-298 5.74e-46

NADH dehydrogenase subunit 1


Pssm-ID: 214341  Cd Length: 363  Bit Score: 159.35  E-value: 5.74e-46
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  24 ERKILGYMQFRKGPNIVGPYGLLQPIADAVKLFTKEPLRPLTSSKLMFIIAPTLALTLALSLWIPLPMPYPLI--NLNLG 101
Cdd:CHL00032   51 EREISAGIQQRIGPEYAGPLGILQALADGTKLLFKEDLLPSRGDIRLFSIGPSIAVISILLSYLVIPFGYHLVlaDLSIG 130

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 102 VLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSYTLSTLTTTQEQ--MWlilpTW 179
Cdd:CHL00032  131 VFLWIAISSIAPIGLLMSGYGSNNKYSFLGGLRAAAQSISYEIPLTLCVLSISLLSNSLSTVDIVEAQSKygFW----GW 206

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 180 PL------AMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTTLFFGSFHSPL--- 250
Cdd:CHL00032  207 NLwrqpigFIVFLISSLAECERLPFDLPEAEEELVAGYQTEYSGIKFGLFYVASYLNLLVSSLFVTVLYLGGWNLSIpyi 286

                         250       260       270       280       290       300
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1693290059 251 -LPELHTINFTTKTLILTTTFLWV--------------RASYPRFRYDQLMHLLWKSFLPLTL 298
Cdd:CHL00032  287 fIPELFEINKTGGVFGTTIGIFITlaktylflfisittRWTLPRLRMDQLLNLGWKFLLPISL 349
HyfC COG0650
Formate hydrogenlyase subunit HyfC [Energy production and conversion];
19-303 8.19e-25

Formate hydrogenlyase subunit HyfC [Energy production and conversion];


Pssm-ID: 440415  Cd Length: 303  Bit Score: 101.41  E-value: 8.19e-25
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  19 FLTLVERKILGYMQFRKGPnivgpyGLLQPIADAVKLFTKEPLRPLTSSKLmFIIAPTLA--LTLALSLWIPLPMPYPLI 96
Cdd:COG0650    20 LLLGIIRKVKARLQGRRGP------PILQPYYDLLKLLRKETVVPETASWL-FRAAPYVAlaAMLLAALLVPVLTTGPPL 92

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059  97 NLNLGVLFILATSSLAVYSILWSGWASNSKYALIGALRAVAQTISYEVTLAIILLSIMLMNGSYTLSTLTTTQEQ---MW 173
Cdd:COG0650    93 SFSGDLIVLVYLLALARFFLALAGLDSGSPFGGIGASREMTLSALAEPPLLLVLFALALLAGSTSLSDIVAYQAAhgpLL 172

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1693290059 174 LILPTWPLAMMWFTSTLAETNRAPFDLTEGESELVSGFNVEYAAGPFALFFMAEYANIILMNALTTTLFFGsFHSPLLPE 253
Cdd:COG0650   173 LSPSLLLAAIAFFIVLLAETGRIPFDIPETHLELHEGMLLEYSGRHLALLELAAALKLFVLLSLFVNLFLP-WGIALTLL 251

                         250       260       270       280       290
                  ....*....|....*....|....*....|....*....|....*....|
gi 1693290059 254 LHTINFTTKTLILTTTFLWVRASYPRFRYDQLMHLLWKSFLPLTLAMCMW 303
Cdd:COG0650   252 LALLLFLLKLLVLAVLLAVIEASTARLRLFRVPDFLWTAFLLALLALLLA 301
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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