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Conserved domains on  [gi|295065546|ref|YP_003587312|]
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NADH dehydrogenase subunit 3 (mitochondrion) [Symphalangus syndactylus]

Protein Classification

NADH dehydrogenase subunit 3( domain architecture ID 10009567)

NADH dehydrogenase subunit 3 is a core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that couples the transfer of electrons from NADH to quinone with the translocation of protons across the membrane

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 1.10e-56

NADH dehydrogenase subunit 3; Provisional


:

Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 171.28  E-value: 1.10e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546   1 MSLVLALTINTLLALLLMIITFWLPQLNTYMEKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 295065546  81 TTSPSLTITSSLTLITILVLSLAYEWSQKGLDWVE 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 1.10e-56

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 171.28  E-value: 1.10e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546   1 MSLVLALTINTLLALLLMIITFWLPQLNTYMEKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 295065546  81 TTSPSLTITSSLTLITILVLSLAYEWSQKGLDWVE 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 8.98e-23

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 84.40  E-value: 8.98e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546   18 MIITFWLPQLNTYMEKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQtTSPSLTITSSLTLITI 97
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIAI 79

                          90
                  ....*....|....*
gi 295065546   98 LVLSLAYEWSQKGLD 112
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 1-113 4.16e-17

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 70.92  E-value: 4.16e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546   1 MSLVLALTINTLLALLLMIITFWLPQLNTYMEKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQ 80
Cdd:COG0838    6 LPILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFR 85

                         90       100       110
                 ....*....|....*....|....*....|...
gi 295065546  81 TTSPsLTITSSLTLITILVLSLAYEWSQKGLDW 113
Cdd:COG0838   86 ELGW-FGLIEMLVFIAILLVGLIYAWKKGALEW 117
 
Name Accession Description Interval E-value
ND3 MTH00106
NADH dehydrogenase subunit 3; Provisional
 1-115 1.10e-56

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177168 [Multi-domain]  Cd Length: 115  Bit Score: 171.28  E-value: 1.10e-56
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546   1 MSLVLALTINTLLALLLMIITFWLPQLNTYMEKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQ 80
Cdd:MTH00106   1 MNLMLTLLTNTLLASLLVLIAFWLPQLNIYSEKASPYECGFDPMGSARLPFSMKFFLVAITFLLFDLEIALLLPLPWASQ 80

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 295065546  81 TTSPSLTITSSLTLITILVLSLAYEWSQKGLDWVE 115
Cdd:MTH00106  81 TNNLNTMLTMALLLISLLALSLAYEWTQKGLEWTE 115
ND3 MTH00136
NADH dehydrogenase subunit 3; Provisional
 1-115 5.44e-37

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177194 [Multi-domain]  Cd Length: 116  Bit Score: 121.18  E-value: 5.44e-37
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546   1 MSLVLA-LTINTLLALLLMIITFWLPQLNTYMEKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWAL 79
Cdd:MTH00136   1 MNLITTiLTITIALSLILAIVSFWLPQMTPDHEKLSPYECGFDPLGSARLPFSLRFFLVAILFLLFDLEIALLLPLPWGD 80

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 295065546  80 QTTSPSLTITSSLTLITILVLSLAYEWSQKGLDWVE 115
Cdd:MTH00136  81 QLPSPLLTFFWATAVLILLTLGLIYEWLQGGLEWAE 116
ND3 MTH00069
NADH dehydrogenase subunit 3; Provisional
 3-115 9.49e-35

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177141 [Multi-domain]  Cd Length: 114  Bit Score: 115.48  E-value: 9.49e-35
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546   3 LVLALTINTLLALLLMIITFWLPQLNTYMEKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTT 82
Cdd:MTH00069   2 IMLMLLISTILSLILITISFWLPLNNPDSEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPTPWASQLN 81

                         90       100       110
                 ....*....|....*....|....*....|...
gi 295065546  83 SPSLTITSSLTLITILVLSLAYEWSQKGLDWVE 115
Cdd:MTH00069  82 TPTNTLFWSTLILILLTLGLIYEWIQGGLEWAE 114
ND3 MTH00113
NADH dehydrogenase subunit 3; Provisional
 1-113 5.90e-34

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177175 [Multi-domain]  Cd Length: 114  Bit Score: 113.44  E-value: 5.90e-34
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546   1 MSLVLALTINTLLALLLMIITFWLPQLNTYMEKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQ 80
Cdd:MTH00113   1 MNLISMLTISLALSTILTTLNFWLTQTKPDNEKLSPYECGFDPLGSARLPFSIRFFLVAILFLLFDLEIALLLPLPWAIN 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 295065546  81 TTSPSLTITSSLTLITILVLSLAYEWSQKGLDW 113
Cdd:MTH00113  81 LTTPTTTLTWATIILTLLTLGLIYEWLQGGLEW 113
ND3 MTH00042
NADH dehydrogenase subunit 3; Validated
 1-115 2.57e-29

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 177117 [Multi-domain]  Cd Length: 116  Bit Score: 101.98  E-value: 2.57e-29
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546   1 MSLVLALTINTLLALLLMIITFWLPQLNTYMEKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQ 80
Cdd:MTH00042   2 TNLIFFLLIILILTSLLLLAGHFLPSRSPDLEKSSPYECGFDPLNSARLPFSFRFFLVAILFLLFDLEIALLFPLPPATL 81

                         90       100       110
                 ....*....|....*....|....*....|....*
gi 295065546  81 TTSPSLTITSSLTLITILVLSLAYEWSQKGLDWVE 115
Cdd:MTH00042  82 ITNPSTLLPISLIFLIILTIGLVYEWVNGGLEWAE 116
ND3 MTH00148
NADH dehydrogenase subunit 3; Provisional
 1-115 5.58e-25

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214433 [Multi-domain]  Cd Length: 117  Bit Score: 91.07  E-value: 5.58e-25
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546   1 MSLVLALTINTLLALLLMIITFWLPQLNTYM-EKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWAL 79
Cdd:MTH00148   2 LSILLSLLFALILSPVLLLLGLVLSKRSYSDrEKSSPFECGFDPISSARSPFSLRFFLLAILFLVFDVEIVLLFPVLQSL 81

                         90       100       110
                 ....*....|....*....|....*....|....*.
gi 295065546  80 QTTSPSLTITSSLTLITILVLSLAYEWSQKGLDWVE 115
Cdd:MTH00148  82 GSSFSVWSLTSLFIFLLILILGLFHEWNEGSLDWVS 117
ND3 MTH00203
NADH dehydrogenase subunit 3; Provisional
 1-113 1.42e-24

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214456 [Multi-domain]  Cd Length: 112  Bit Score: 89.57  E-value: 1.42e-24
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546   1 MSLVLALTINTLLALLLMIITFWLPQLNTYMEKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQ 80
Cdd:MTH00203   2 NLIMLFFLIALLLSLILLFIAFWLPKVNPDGEKLSPYECGFDPLGSARLPFSLQFFLVALSFLLFDLEIALLLPLPWSNQ 81

                         90       100       110
                 ....*....|....*....|....*....|...
gi 295065546  81 TTSPSLTITSSltLITILVLSLAYEWSQKGLDW 113
Cdd:MTH00203  82 LSSLSLLLAFL--FLILLTLGLIYEWLQGGLEW 112
Oxidored_q4 pfam00507
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;
18-112 8.98e-23

NADH-ubiquinone/plastoquinone oxidoreductase, chain 3;


Pssm-ID: 459838 [Multi-domain]  Cd Length: 94  Bit Score: 84.40  E-value: 8.98e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546   18 MIITFWLPQLNTYMEKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQtTSPSLTITSSLTLITI 97
Cdd:pfam00507   1 LLLSRLLGPKRPNPEKLSPYECGFDPVGDARLRFSVRFYLVAILFLIFDVEVVFLFPWAVSFR-ELGWFGFVEMLIFIAI 79

                          90
                  ....*....|....*
gi 295065546   98 LVLSLAYEWSQKGLD 112
Cdd:pfam00507  80 LLVGLVYAWKKGALE 94
ND3 MTH00161
NADH dehydrogenase subunit 3; Provisional
 1-113 1.75e-19

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177217 [Multi-domain]  Cd Length: 113  Bit Score: 76.74  E-value: 1.75e-19
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546   1 MSLVLALTINTLLALLLMIITFWLPQLNTYMEKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQ 80
Cdd:MTH00161   1 MILIILLIILLISIILMILASLLSKKSIMDREKSSPFECGFDPKSSARLPFSLRFFLIAIIFLIFDVEIALLLPMIFIFK 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 295065546  81 TTSPSLTITSSLTLITILVLSLAYEWSQKGLDW 113
Cdd:MTH00161  81 TSNMMSWLITSSFFILILLLGLYYEWNQGALEW 113
ND3 MTH00012
NADH dehydrogenase subunit 3; Validated
 32-113 1.91e-18

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164588 [Multi-domain]  Cd Length: 117  Bit Score: 74.12  E-value: 1.91e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546  32 EKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTSPSLTITSSLTLITILVLSLAYEWSQKGL 111
Cdd:MTH00012  34 EKTSPFECGFDPHKTARIPFSLRFFLLAIIFIVFDIEIVLLMPVPTILMTSTSKTVVYTSILFLLILVIGLIHEWREGSL 113


                 ..
gi 295065546 112 DW 113
Cdd:MTH00012 114 DW 115
ND3 MTH00202
NADH dehydrogenase subunit 3; Provisional
 2-115 2.98e-18

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 214455 [Multi-domain]  Cd Length: 117  Bit Score: 73.87  E-value: 2.98e-18
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546   2 SLVLALTINTLLALLLMIITFwlpQLNTYMEKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQT 81
Cdd:MTH00202   7 MSILSILISSLLFLVSWMLSF---RSLMDREKSSPFECGFDPKESARLPFSMRFFLLAVIFLVFDIEIALLLPLPLVLKS 83

                         90       100       110
                 ....*....|....*....|....*....|....
gi 295065546  82 TSPSLTITSSLTLITILVLSLAYEWSQKGLDWVE 115
Cdd:MTH00202  84 SWSKGGLLGGTIFLLILIGGLIHEWKEGSLDWVK 117
NuoA COG0838
NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH: ...
 1-113 4.16e-17

NADH:ubiquinone oxidoreductase subunit 3 (chain A) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 3 (chain A) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440600 [Multi-domain]  Cd Length: 117  Bit Score: 70.92  E-value: 4.16e-17
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546   1 MSLVLALTINTLLALLLMIITFWLPQLNTYMEKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQ 80
Cdd:COG0838    6 LPILIFLLVALGLALAMLLLSRLLGPKRPNPEKLSPYECGIEPVGDARIRFSVRYYLVALLFVIFDVEVVFLFPWAVVFR 85

                         90       100       110
                 ....*....|....*....|....*....|...
gi 295065546  81 TTSPsLTITSSLTLITILVLSLAYEWSQKGLDW 113
Cdd:COG0838   86 ELGW-FGLIEMLVFIAILLVGLIYAWKKGALEW 117
ND3 MTH00055
NADH dehydrogenase subunit 3; Provisional
 32-113 7.34e-16

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177128 [Multi-domain]  Cd Length: 118  Bit Score: 67.81  E-value: 7.34e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546  32 EKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTSPSLTITSSLTLItILVLSLAYEWSQKGL 111
Cdd:MTH00055  37 EKVSVYECGFDPFESSRIPFSVRFFLVGILFLIFDLEISFLFPWCVVYNQIGLFGFWVMYLFLI-ILTIGLIYEWVKGGL 115


                 ..
gi 295065546 112 DW 113
Cdd:MTH00055 116 EW 117
PRK06602 PRK06602
NADH:ubiquinone oxidoreductase subunit A; Validated
 3-113 8.96e-16

NADH:ubiquinone oxidoreductase subunit A; Validated


Pssm-ID: 180638 [Multi-domain]  Cd Length: 121  Bit Score: 67.58  E-value: 8.96e-16
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546   3 LVLALTINTLLALLLMIITFWLPQLNTYMEKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTT 82
Cdd:PRK06602  11 FLIFLIVAIGLGILLLVAGKLLGPRAPDREKNSPYESGFEAFGDARMKFDVRFYLVAILFVIFDLEAAFLFPWAVSFREI 90

                         90       100       110
                 ....*....|....*....|....*....|.
gi 295065546  83 SpSLTITSSLTLITILVLSLAYEWSQKGLDW 113
Cdd:PRK06602  91 G-WLGFVEAMIFILVLLVGLVYLWRKGALDW 120
ND3 MTH00018
NADH dehydrogenase subunit 3; Validated
 1-113 2.89e-15

NADH dehydrogenase subunit 3; Validated


Pssm-ID: 164592 [Multi-domain]  Cd Length: 113  Bit Score: 65.85  E-value: 2.89e-15
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546   1 MSLVLALTINTLLALLLMIITFWLPQLNTYMEKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQ 80
Cdd:MTH00018   1 YGLFILLIFSVVLSALFSGASYFLGVKQPDREKVSAYECGFDPFGFPGRPFSIRFFLIGILFLIFDLEISFLFPWCVLYN 80

                         90       100       110
                 ....*....|....*....|....*....|...
gi 295065546  81 TTSPSLTITSSLTLItILVLSLAYEWSQKGLDW 113
Cdd:MTH00018  81 QIAPFGFWTMVGFLF-ILTLGLIYEWIKGGLEW 112
ND3 MTH00030
NADH dehydrogenase subunit 3; Provisional
 32-113 2.86e-11

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 164603 [Multi-domain]  Cd Length: 123  Bit Score: 56.09  E-value: 2.86e-11
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546  32 EKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTSpSLTITSSLTLITILVLSLAYEWSQKGL 111
Cdd:MTH00030  42 EKSSIYECGFDPFGKIRTPFTIKFVLVGILFMIFDIEISFLFPWSIVFNQLN-LFSFWIVYTFLIVLAIGLAYEWIKGGL 120


                 ..
gi 295065546 112 DW 113
Cdd:MTH00030 121 EW 122
PRK07928 PRK07928
NADH dehydrogenase subunit A; Validated
 33-113 6.49e-06

NADH dehydrogenase subunit A; Validated


Pssm-ID: 181171 [Multi-domain]  Cd Length: 119  Bit Score: 41.97  E-value: 6.49e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546  33 KANPYECGFDP----LSPARIPfsMKFFLVAITFLLFDLEIALLLPLPWALQTTSPSLTITSSLTLITILVlSLAYEWSQ 108
Cdd:PRK07928  37 KLEAYECGIEPtpqpAGGGRFP--VKYYLTAMLFIVFDIEIVFLYPWAVSFDALGVFGLVEMALFMLTVFV-AYAYVWRR 113


                 ....*
gi 295065546 109 KGLDW 113
Cdd:PRK07928 114 GGLEW 118
ndhC CHL00022
NADH dehydrogenase subunit 3
 2-113 1.74e-05

NADH dehydrogenase subunit 3


Pssm-ID: 176964 [Multi-domain]  Cd Length: 120  Bit Score: 40.74  E-value: 1.74e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546   2 SLVLALTINTLLALLLMIITFWLPQLNTYMEKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQT 81
Cdd:CHL00022   9 IFWAFLIISSLIPILAFLISGLLAPISKGPEKLSSYESGIEPMGDAWLQFRIRYYMFALVFVVFDVETVFLYPWAMSFDV 88

                         90       100       110
                 ....*....|....*....|....*....|..
gi 295065546  82 TSPSLTItSSLTLITILVLSLAYEWSQKGLDW 113
Cdd:CHL00022  89 LGVSAFI-EALIFVLILIVGLVYAWRKGALEW 119
PRK08489 PRK08489
NAD(P)H-quinone oxidoreductase subunit 3;
3-69 4.34e-05

NAD(P)H-quinone oxidoreductase subunit 3;


Pssm-ID: 181448 [Multi-domain]  Cd Length: 129  Bit Score: 40.04  E-value: 4.34e-05
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 295065546   3 LVLALTINTLLALLLMIITFWLPQLNTYMEKANPYECGFDPL-SPARIpfSMKFFLVAITFLLFDLEI 69
Cdd:PRK08489  17 LVLTFVAFFLTTRLARFISRKLAQKNTEKLKLAIYECGPEPVkQPNRI--SSHFYIMALLFILFDVEI 82
PRK07756 PRK07756
NADH-quinone oxidoreductase subunit A;
7-113 8.74e-05

NADH-quinone oxidoreductase subunit A;


Pssm-ID: 169084 [Multi-domain]  Cd Length: 122  Bit Score: 38.96  E-value: 8.74e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 295065546   7 LTINTLLALLLMIITFWLPQLNTYMEKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEIALLLPLPWALQTTSpSL 86
Cdd:PRK07756  16 LLLGILLPVVALTLGRMLRPNKPSAAKATTYESGIEPFHDANIRFHARYYIFALLFVIFDVETLFLYPWAVAYDKLG-LF 94

                         90       100
                 ....*....|....*....|....*..
gi 295065546  87 TITSSLTLITILVLSLAYEWSQKGLDW 113
Cdd:PRK07756  95 ALIEMLIFVVMLLVGLAYAWKKKVLQW 121
ND3 MTH00092
NADH dehydrogenase subunit 3; Provisional
 1-69 2.39e-04

NADH dehydrogenase subunit 3; Provisional


Pssm-ID: 177155  Cd Length: 111  Bit Score: 37.57  E-value: 2.39e-04
                         10        20        30        40        50        60
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 295065546   1 MSLVLALTINTLLALLLMIITFWLPQLNTYMEKANPYECGFDPLSPARIPFSMKFFLVAITFLLFDLEI 69
Cdd:MTH00092   2 LVLIFVFLFTLLLLMLLYLLNFFLSVKKFDLLKVSSFECGFESVGKIQNSFSIHFFKIMLMFVIFDLEI 70
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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