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Conserved domains on  [gi|242610090|ref|YP_003001973|]
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NADH dehydrogenase subunit 4 (mitochondrion) [Taenia multiceps]

Protein Classification

NADH dehydrogenase subunit 4( domain architecture ID 11475885)

NADH dehydrogenase subunit 4 is the core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
ND4 MTH00062
NADH dehydrogenase subunit 4; Provisional
 2-417 7.16e-142

NADH dehydrogenase subunit 4; Provisional


:

Pssm-ID: 214413 [Multi-domain]  Cd Length: 417  Bit Score: 410.85  E-value: 7.16e-142
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090   2 FFFISINSFLIILMCIFVSLLFSCGINCMSIFSMNVFNGMFIFDSISFYLIILVLLLGLYSQIMFYSMLSDVVRMYLFFS 81
Cdd:MTH00062   1 FYFFSVGFFLGFLLLLLFCLLYSSGVGCCILVVNNVFNGLFIFDSLSFYLILLVLFLGLYSQVMFYNLLSGVSRFFLFLS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  82 LGFTVLSFCVNHCVVFWCVYELSMLPLLYLIFSESPYSERFLAGWYFCGYLLSTSLPLILILLYLSLINDSFLFSEWGYD 161
Cdd:MTH00062  81 LIFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSD 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 162 SSVSLIVYYLLSFIFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFSSGFLWYLFLCCILSIF 241
Cdd:MTH00062 161 DSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSVF 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 242 FLVTSCSELDGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFYDTSHTRNWILLKSSING 321
Cdd:MTH00062 241 FLITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGING 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 322 -IGLMSIVVFSLLSLCSFPTTIQFFCEVGLVSQSFGFLAYLLFWCFYLFFGGLVPLVLCGHLLIRSECYESVNACYYSYF 400
Cdd:MTH00062 321 sLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFWCFYLFFGGLVPLILLGHLLIRSESYESINVSNYSYL 400

                        410
                 ....*....|....*..
gi 242610090 401 YFLVFLCLWCYFGILIL 417
Cdd:MTH00062 401 FFLIFLVFWCYLGFLVL 417
 
Name Accession Description Interval E-value
ND4 MTH00062
NADH dehydrogenase subunit 4; Provisional
 2-417 7.16e-142

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214413 [Multi-domain]  Cd Length: 417  Bit Score: 410.85  E-value: 7.16e-142
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090   2 FFFISINSFLIILMCIFVSLLFSCGINCMSIFSMNVFNGMFIFDSISFYLIILVLLLGLYSQIMFYSMLSDVVRMYLFFS 81
Cdd:MTH00062   1 FYFFSVGFFLGFLLLLLFCLLYSSGVGCCILVVNNVFNGLFIFDSLSFYLILLVLFLGLYSQVMFYNLLSGVSRFFLFLS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  82 LGFTVLSFCVNHCVVFWCVYELSMLPLLYLIFSESPYSERFLAGWYFCGYLLSTSLPLILILLYLSLINDSFLFSEWGYD 161
Cdd:MTH00062  81 LIFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSD 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 162 SSVSLIVYYLLSFIFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFSSGFLWYLFLCCILSIF 241
Cdd:MTH00062 161 DSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSVF 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 242 FLVTSCSELDGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFYDTSHTRNWILLKSSING 321
Cdd:MTH00062 241 FLITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGING 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 322 -IGLMSIVVFSLLSLCSFPTTIQFFCEVGLVSQSFGFLAYLLFWCFYLFFGGLVPLVLCGHLLIRSECYESVNACYYSYF 400
Cdd:MTH00062 321 sLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFWCFYLFFGGLVPLILLGHLLIRSESYESINVSNYSYL 400

                        410
                 ....*....|....*..
gi 242610090 401 YFLVFLCLWCYFGILIL 417
Cdd:MTH00062 401 FFLIFLVFWCYLGFLVL 417
NDH_I_M TIGR01972
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ...
 77-311 2.87e-13

proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273903 [Multi-domain]  Cd Length: 481  Bit Score: 71.12  E-value: 2.87e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090   77 YLFFSLGFTVLSFCVNHCVVFWCVYELSMLPLLYLI--FSESpysERFLAGWYFCGYLLSTSLPLILILLYLSLIN-DSF 153
Cdd:TIGR01972 111 LLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIgvWGGP---NRIYAAMKFFLYTLAGSLLMLLAILGLYFLGgGTF 187

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  154 LFSEWG---YDSSVSLIVYYLLSFIFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIF---SSG 227
Cdd:TIGR01972 188 DLLELLnlpLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFpdaSLY 267

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  228 FLWYLFLCCILSIFFLVTSC-SELDGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFYDT 306
Cdd:TIGR01972 268 FAPVLAALGVIAIIYGALIAlAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYER 347


                  ....*
gi 242610090  307 SHTRN 311
Cdd:TIGR01972 348 AHTRD 352
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
 153-362 4.29e-13

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 69.26  E-value: 4.29e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  153 FLFSEWGYDSSVSLIVYYLLSFIFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFSSGFLWY- 231
Cdd:pfam00361  69 SKALTGGLNSSGLLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQq 148

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  232 -LFLCCILSIFFLVTSC-SELDGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGL-SAGIVFGLLWCFYDTSH 308
Cdd:pfam00361 149 iLLILAIISMLLGSLAAlVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLfSAGLFLCAGSVIYRRVH 228

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 242610090  309 TRNWILLKSSINGIGLMSIVVF-SLLSLCSFPTTIQFFCEVGLVSQSFGFLAYLL 362
Cdd:pfam00361 229 TRNIRDYGGLAKTMPILALVFLvAMLSLAGLPPTAGFLGKFLILAAAVAASWIFL 283
NuoM COG1008
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ...
 152-311 5.21e-13

NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440632 [Multi-domain]  Cd Length: 488  Bit Score: 70.50  E-value: 5.21e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 152 SFLFSEW---GYDSSVSLIVYYLLSFIFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIF---S 225
Cdd:COG1008  192 TFDIAELaaaPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFpeaS 271

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 226 SGFLWYLFLCCILSIFF-LVTSCSELDGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFY 304
Cdd:COG1008  272 AYFAPLLAALGVIGIIYgALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLY 351


                 ....*..
gi 242610090 305 DTSHTRN 311
Cdd:COG1008  352 DRTHTRD 358
 
Name Accession Description Interval E-value
ND4 MTH00062
NADH dehydrogenase subunit 4; Provisional
 2-417 7.16e-142

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214413 [Multi-domain]  Cd Length: 417  Bit Score: 410.85  E-value: 7.16e-142
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090   2 FFFISINSFLIILMCIFVSLLFSCGINCMSIFSMNVFNGMFIFDSISFYLIILVLLLGLYSQIMFYSMLSDVVRMYLFFS 81
Cdd:MTH00062   1 FYFFSVGFFLGFLLLLLFCLLYSSGVGCCILVVNNVFNGLFIFDSLSFYLILLVLFLGLYSQVMFYNLLSGVSRFFLFLS 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  82 LGFTVLSFCVNHCVVFWCVYELSMLPLLYLIFSESPYSERFLAGWYFCGYLLSTSLPLILILLYLSLINDSFLFSEWGYD 161
Cdd:MTH00062  81 LIFSILCFCVNNSLLFWFFYELSIIPLLYLLFSESPYSERYLASWYFLGYLLLTSLPLLLCLLYLSLVNGSFNFSDWGSD 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 162 SSVSLIVYYLLSFIFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFSSGFLWYLFLCCILSIF 241
Cdd:MTH00062 161 DSVSLIVYYVLSFMFITKVPLFPFHTWLPIVHAEASSPVSIFLSGYIMKLGLLGVYRFCGFIFSGSFLGYLFLCCLFSVF 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 242 FLVTSCSELDGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFYDTSHTRNWILLKSSING 321
Cdd:MTH00062 241 FLITACSELDGKRWLAFLSLSHILVPVLGLFVGDWSSINLSFFYCLGHGLSAGLVFLLLWCFYEVSGSRNWVLLKSGING 320

                        330       340       350       360       370       380       390       400
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 322 -IGLMSIVVFSLLSLCSFPTTIQFFCEVGLVSQSFGFLAYLLFWCFYLFFGGLVPLVLCGHLLIRSECYESVNACYYSYF 400
Cdd:MTH00062 321 sLVLRVIVVFSFLSLCSFPPTIQFFCEVFLVSSSFGVLVYLLFWCFYLFFGGLVPLILLGHLLIRSESYESINVSNYSYL 400

                        410
                 ....*....|....*..
gi 242610090 401 YFLVFLCLWCYFGILIL 417
Cdd:MTH00062 401 FFLIFLVFWCYLGFLVL 417
ND4 MTH00163
NADH dehydrogenase subunit 4; Provisional
 1-370 3.23e-14

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214443 [Multi-domain]  Cd Length: 445  Bit Score: 74.03  E-value: 3.23e-14
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090   1 MFFFISINSFLIILMCIFVSLLFSCGINCMSIFSMNVFNGMFIFDSISFYLII-----LVLLLGLYSQIMFYSMLSDVVR 75
Cdd:MTH00163  11 LIPLCFLKNSWWLVQSLLFLLSFLFMLLFSLSFYFSNISYFFGLDLLSFGLILlsfwiCMLMILSSESVYKKNNYSNLFL 90

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  76 MYLFFSLGFTVLSFCVNHCVVFWCVYELSMLPLLYLIFSESPYSERFLAGWYFCGYLLSTSLPLILILLYLSLINDSFLF 155
Cdd:MTH00163  91 FLILFLLIFLLLTFSSMNLLLFYIFFESSLIPTLFLILGWGYQPERLQAGIYLLFYTLFASLPLLVGIFYLYNNSGSLSF 170

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 156 SEWGYDSSVSLIVYYLLSFIFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFSSG--FLWYLF 233
Cdd:MTH00163 171 FLLNFFGSLNFLWYLSMILAFLVKMPMFFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLLRVMSFFSKLGlkFNYIWI 250

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 234 LCCILSIFFLVTSC-SELDGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFYDTSHTRNW 312
Cdd:MTH00163 251 SISLVGGVIVSLIClRQVDLKSLIAYSSVAHMGLVLGGLMTFSYWGLMGSLLMMIGHGLCSSGLFCLANIIYERLGSRSL 330

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 242610090 313 ILLKSSINGIGLMSIVVFSLLSL-CSFPTTIQFFCEVGLVSQSFGFLAYLLFWCFYLFF 370
Cdd:MTH00163 331 LINKGLLNFMPSMSLWWFLLSSSnMAAPPSLNLLGEISLINSLISWSKLSMIFLMLLSF 389
NDH_I_M TIGR01972
proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th ...
 77-311 2.87e-13

proton-translocating NADH-quinone oxidoreductase, chain M; This model describes the 13th (based on E. coli) structural gene, M, of bacterial NADH dehydrogenase I, as well as chain 4 of the corresponding mitochondrial complex I and of the chloroplast NAD(P)H dehydrogenase complex. [Energy metabolism, Electron transport]


Pssm-ID: 273903 [Multi-domain]  Cd Length: 481  Bit Score: 71.12  E-value: 2.87e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090   77 YLFFSLGFTVLSFCVNHCVVFWCVYELSMLPLLYLI--FSESpysERFLAGWYFCGYLLSTSLPLILILLYLSLIN-DSF 153
Cdd:TIGR01972 111 LLLLLEAGVIGVFLALDLFLFYVFWEAMLIPMYLLIgvWGGP---NRIYAAMKFFLYTLAGSLLMLLAILGLYFLGgGTF 187

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  154 LFSEWG---YDSSVSLIVYYLLSFIFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIF---SSG 227
Cdd:TIGR01972 188 DLLELLnlpLPFGVQTWLFLAFFIAFAVKVPLFPLHTWLPDAHVEAPTAGSVILAGVLLKMGTYGFLRFNLPLFpdaSLY 267

                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  228 FLWYLFLCCILSIFFLVTSC-SELDGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFYDT 306
Cdd:TIGR01972 268 FAPVLAALGVIAIIYGALIAlAQTDIKRLIAYSSISHMGFVLLGIFSFNELGISGAVFQMISHGLITAALFLLVGVLYER 347


                  ....*
gi 242610090  307 SHTRN 311
Cdd:TIGR01972 348 AHTRD 352
Proton_antipo_M pfam00361
Proton-conducting membrane transporter; This is a family of membrane transporters that ...
 153-362 4.29e-13

Proton-conducting membrane transporter; This is a family of membrane transporters that inlcudes some 7 of potentially 14-16 TM regions. In many instances the family forms part of complex I that catalyzes the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane, and in this context is a combination predominantly of subunits 2, 4, 5, 14, L, M and N. In many bacterial species these proteins are probable stand-alone transporters not coupled with oxidoreduction. The family in total represents homologs across the phyla.


Pssm-ID: 425636 [Multi-domain]  Cd Length: 291  Bit Score: 69.26  E-value: 4.29e-13
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  153 FLFSEWGYDSSVSLIVYYLLSFIFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFSSGFLWY- 231
Cdd:pfam00361  69 SKALTGGLNSSGLLLLFLLILVGFLFKSAQVPFHTWLPDAYEGAPTPVSALLAATLVKAGGYGLIRRSLLYLPSSPFIQq 148

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  232 -LFLCCILSIFFLVTSC-SELDGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGL-SAGIVFGLLWCFYDTSH 308
Cdd:pfam00361 149 iLLILAIISMLLGSLAAlVQTDIKRLLAYSSISHMGYMLIALGAGTIYGIQAAIFHLLTHGLfSAGLFLCAGSVIYRRVH 228

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....*
gi 242610090  309 TRNWILLKSSINGIGLMSIVVF-SLLSLCSFPTTIQFFCEVGLVSQSFGFLAYLL 362
Cdd:pfam00361 229 TRNIRDYGGLAKTMPILALVFLvAMLSLAGLPPTAGFLGKFLILAAAVAASWIFL 283
NuoM COG1008
NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH: ...
 152-311 5.21e-13

NADH:ubiquinone oxidoreductase subunit 4 (chain M) [Energy production and conversion]; NADH:ubiquinone oxidoreductase subunit 4 (chain M) is part of the Pathway/BioSystem: NADH dehydrogenase


Pssm-ID: 440632 [Multi-domain]  Cd Length: 488  Bit Score: 70.50  E-value: 5.21e-13
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 152 SFLFSEW---GYDSSVSLIVYYLLSFIFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIF---S 225
Cdd:COG1008  192 TFDIAELaaaPLPLTAQLLLFLAFFIAFAVKVPMFPFHTWLPDAHVEAPTAGSVLLAGVLLKMGGYGLLRFALPLFpeaS 271

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 226 SGFLWYLFLCCILSIFF-LVTSCSELDGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFY 304
Cdd:COG1008  272 AYFAPLLAALGVIGIIYgALVALAQTDLKRLIAYSSVSHMGFVLLGIFALNPLGLQGAVLQMVSHGLITAALFLLVGVLY 351


                 ....*..
gi 242610090 305 DTSHTRN 311
Cdd:COG1008  352 DRTHTRD 358
ND4 MTH00206
NADH dehydrogenase subunit 4; Provisional
 10-374 1.39e-12

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214458 [Multi-domain]  Cd Length: 450  Bit Score: 68.81  E-value: 1.39e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  10 FLIILMCIFVSLLFSCGINCMSIFSMNVFNGMFIFDSISFYLIILVLLLGLYSQIMFYSMLS-------DVVRMYLFFSL 82
Cdd:MTH00206  23 RSTTFFSFLIALLFLLWFKWSSEVGWSFSNLYLSYDPLSSPLVILSCWLLPLMFLASQNHMKnepinrqRIYITLLIVLQ 102

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  83 GFTVLSFCVNHCVVFWCVYELSMLPLLYLIFSESPYSERFLAGWYFCGYLLSTSLPLILILLYLSLINDSF---LFSEWG 159
Cdd:MTH00206 103 LFLILFFSSSNLLLFYILFEASLIPTLLLITRWGNQKERLNAGYYFLFYTLIGSLPLLIALLFLQNSLGSLslyILYFSK 182

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 160 YDSSVSLIVYYLLSFIFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCA---SFIFSSGFLWYLFLCC 236
Cdd:MTH00206 183 LTTWNNNLWWLACILAFLVKLPLYGVHLWLPKAHVEAPVAGSMVLAGVLLKLGGYGMMRIIlilGPSTKLSSYFFIILGL 262

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 237 ILSIFFLVTSCSELDGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFYDTSHTRNWILLK 316
Cdd:MTH00206 263 WGSIMTSSICLRQTDLKSLIAYSSVSHMSLVTAGILSGSPWGFKGALLLMIAHGLVSSALFCLANLLYERSHTRTILGNR 342

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|....*....
gi 242610090 317 SSINGIGLMS-IVVFSLLSLCSFPTTIQFFCEVGLVSQSFGFLAYLLFWCFYLFFGGLV 374
Cdd:MTH00206 343 GLQMILPLLSfWWLLFFLANLGLPPFPNLFGELLIITSLFSWSNFTLPLLGLGFLFTAI 401
PRK05846 PRK05846
NADH:ubiquinone oxidoreductase subunit M; Reviewed
 152-310 3.63e-12

NADH:ubiquinone oxidoreductase subunit M; Reviewed


Pssm-ID: 235622 [Multi-domain]  Cd Length: 497  Bit Score: 67.92  E-value: 3.63e-12
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 152 SFLFSEWgYDSSVSLIVYYLLSFIFF----TKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFSSG 227
Cdd:PRK05846 194 TFDIADL-LNLPLPPGVQYWLFLAFFiafaVKMPMFPLHTWLPDAHVQAPTAGSVLLAGILLKMGAYGLLRFSLPLFPDA 272

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 228 FLWYLFLCCILS----IFFLVTSCSELDGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCF 303
Cdd:PRK05846 273 SHEFAPIIITLGviaiIYGALVALAQTDIKKLIAYSSISHMGFVTLGIFAGNQLGIQGAIFQMISHGLSSAALFLLVGVL 352


                 ....*..
gi 242610090 304 YDTSHTR 310
Cdd:PRK05846 353 YDRLHTR 359
PRK02546 PRK02546
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
 75-338 1.27e-10

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 235050 [Multi-domain]  Cd Length: 525  Bit Score: 63.19  E-value: 1.27e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  75 RMYLFFSL---GFTVLSFCVNHCVVFWCVYELSMLPLlYLIFSESPYSERFLAGWYFCGYLLSTSLPLILILLYLSLIND 151
Cdd:PRK02546 115 KLFYFLMLamyGGQIAVFAVQDMLLFFLAWELELIPV-YLLLAIWGGKKRQYAATKFILYTAGSSLFILLAALAMAFYGD 193

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 152 --SFLFSEWG---YDSSVSLIVYYLLSFIFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFSS 226
Cdd:PRK02546 194 tpTFDMTALAakdFGLGFQLLCYAGLLIAYGVKLPIVPLHTWLPDAHGEATAPVHMLLAGILLKMGGYALLRMNAGMLPD 273

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 227 GFLWYLFLCCILS----IFFLVTSCSELDGKRWLAFLSLAHIVVPFLGfyVSDWSNINFS--FFYCLGHGLSAGIVFGLL 300
Cdd:PRK02546 274 AHAQFAPLLIVLGvvniIYAALTSFAQRNLKRKIAYSSISHMGFVLIG--IGSFTDLGTSgaMLQMISHGLIGASLFFLV 351

                        250       260       270
                 ....*....|....*....|....*....|....*...
gi 242610090 301 WCFYDTSHTrnwiLLKSSINGIGLMSIVVFSLLSLCSF 338
Cdd:PRK02546 352 GATYDRTHT----LMLDEMGGVGQKMRKMFAMWTACSL 385
PRK12561 PRK12561
NAD(P)H-quinone oxidoreductase subunit 4; Provisional
 160-332 9.62e-10

NAD(P)H-quinone oxidoreductase subunit 4; Provisional


Pssm-ID: 237137 [Multi-domain]  Cd Length: 504  Bit Score: 60.43  E-value: 9.62e-10
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 160 YDSSVSLIVYYLLSFIFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFSSGFLWYLFLCCILS 239
Cdd:PRK12561 179 YPLALELLLYAGFLIAFGVKLPIFPLHTWLPDAHGEASAPVSMILAGVLLKMGGYALIRFNVQMLPDAHVYFAPALAILG 258

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 240 IFFLV----TSCSELDGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFYDTSHTrnwiLL 315
Cdd:PRK12561 259 VVNIIygalNAFAQDNVKRRLAYSSVSHMGFVLLGIAAFTDLGISGAMLQMISHGLIAAALFFLTGVTYERTHT----LS 334

                        170
                 ....*....|....*..
gi 242610090 316 KSSINGIGLMSIVVFSL 332
Cdd:PRK12561 335 IPNMGGLAKVMPKTFAL 351
ND4 MTH00226
NADH dehydrogenase subunit 4; Provisional
 41-310 1.06e-09

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214466 [Multi-domain]  Cd Length: 505  Bit Score: 60.32  E-value: 1.06e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  41 MFIFDSISFYLIILVLLLGLYSQIMFYSMLSDVVRMYLFFSLGFTVL---SFCVNHCVVFWCVYELSMLPLLYLIFSESP 117
Cdd:MTH00226  97 VFAVDGISIYFIILTGFIVPCSILISWHSVKYLTKSFLICMLILEFLlyaVFSVLDIFMFYILFEGVLIPMYLILGIWGS 176

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 118 YSERFLAGWYFCGYLLSTSLPLILILLYLSLINDSFLFSEWGydSSVSLIVYYLLSFIFF-------TKVPLVPFHTWLP 190
Cdd:MTH00226 177 REEKMQAAYYFFFYTLIGSVLMLLCLFSLYNIHGTTDYLTLA--SCSHVVSEQTQKWIFLgiflamaVKIPIFPFHIWLP 254

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 191 IVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFSSGFLWYLFLCCILSIFFLV----TSCSELDGKRWLAFLSLAHIVV 266
Cdd:MTH00226 255 KAHVEAPVAGSVLLAGILLKLGGYGLVRLSWPILPLGAQNLAPAVIAMGIVGIVygsfATCRQIDVKRLVAYSSVAHMGL 334

                        250       260       270       280
                 ....*....|....*....|....*....|....*....|....
gi 242610090 267 PFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFYDTSHTR 310
Cdd:MTH00226 335 VSITLVTHDIIGLTGSIFIMLAHGIVSSLLFILVTILYDRHHTR 378
ND4 MTH00204
NADH dehydrogenase subunit 4; Provisional
 76-310 4.14e-09

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 164750 [Multi-domain]  Cd Length: 485  Bit Score: 58.15  E-value: 4.14e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  76 MYLFFSLGFTVLSFCVNHCVVFWCVYELSMLPLLYLIFSESPYSERFLAGWYFCGYLLSTSLPLILILLYLSLI---NDS 152
Cdd:MTH00204 116 LCLLFLEVLLIGVFSVLDLLLFYILFEGILIPMFLLIGIWGSREEKVRASYYFFFYTFAGSVFMLLGIFQLYSItgtTDY 195

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 153 FLFSEWGYDSSVSLIVYYLLSFIFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFSSGFLWYL 232
Cdd:MTH00204 196 QILLNIKLPLSIQKWLLVGFFLSLAVKIPQIPFHIWLPQAHVEAPVAGSVILAGILLKLGGYGFLRFSWPLFPAASEYFA 275

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 233 FLCCILSIFFLV----TSCSELDGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFYDTSH 308
Cdd:MTH00204 276 PLIVMLSVIAVIygslTTCRQVDFKRLIAYSSVAHMGLVPLGLFTHTIEGLVAAVFLMLAHGFVSSALFIAVTFLYERHH 355


                 ..
gi 242610090 309 TR 310
Cdd:MTH00204 356 TR 357
ND4 MTH00014
NADH dehydrogenase subunit 4; Validated
 9-334 4.46e-09

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214399 [Multi-domain]  Cd Length: 452  Bit Score: 58.21  E-value: 4.46e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090   9 SFLIILMCIFVSLLFSCGINCM-SIFSMNVFNGMFIFDSISFYLIILVLLLGLYSQIMFYSMLSDVVRMYLFFSLGFTVL 87
Cdd:MTH00014  26 TFSTLLLLSLFTLLNLYPMSAPySMFTESLSSDMLSAPLITLTLWITALMILASFKIFQNNKAPKTFMTNILILNLILLL 105

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  88 SFCVNHCVVFWCVYELSMLPLLYLIFSESPYSERFLAGWYFCGYLLSTSLPLILILLYLSLINDSFLFSEWGYDSSvSLI 167
Cdd:MTH00014 106 TFSASNLLMFYIFFEASLIPTLFLILGWGYQPERLQASFYLMIYTVTASLPLLMSILLIFYTNNSLSMLMSSMEPP-SIY 184

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 168 VYYLLSFI----FFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFSSGFLWYLFLCCILSIFFL 243
Cdd:MTH00014 185 LMNLWWLItilaFMVKMPLYTVHLWLPKAHVEAPVAGSMILAGILLKLGGYGLLRMSSLFMHINKSLSAPFSSISLVGAV 264

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 244 VTSCSEL---DGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFYDTSHTRNWILLKSSIN 320
Cdd:MTH00014 265 ITSLICIrqpDLKSLIAYSSVGHMGLMTAGIMSNTSWGWQGALAMMIAHGLCSSALFALANMTYETTHTRSLFLTKGLLS 344

                        330
                 ....*....|....
gi 242610090 321 GIGLMSIVVFSLLS 334
Cdd:MTH00014 345 LFPTMTMWWFLLSA 358
ND4 MTH00217
NADH dehydrogenase subunit 4; Provisional
 160-310 4.82e-09

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214462 [Multi-domain]  Cd Length: 482  Bit Score: 58.14  E-value: 4.82e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 160 YDSSVSLIVYYLLSFIFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFSSGFLWYLFLCCILS 239
Cdd:MTH00217 200 IEKELQYFIFLGFFLSLAIKIPKIPFHIWLPQAHVEAPVAGSVILAGVLLKLGGYGFIRFSWPLLPEASEYFSPLIQTLS 279

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 242610090 240 IFFLV----TSCSELDGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFYDTSHTR 310
Cdd:MTH00217 280 LLAIIygslTTCRQVDLKRIIAYSSVAHMGLVTLGIFSHTIQGLVAAIFLMLAHGLVSSALFIAVTFLYERHHTR 354
ND4 MTH00205
NADH dehydrogenase subunit 4; Provisional
 1-334 5.21e-09

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214457 [Multi-domain]  Cd Length: 448  Bit Score: 57.68  E-value: 5.21e-09
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090   1 MFFFISINSFLIILMCIFVSLLFSCGINCMSIFSMNVFNGMFIFDSISFYLIILVLLLGLYSQIMFYSMLSDVVRMYLFF 80
Cdd:MTH00205  12 ILFVLKFKDWSFFSNLLLIGLFFSSFFFSNSFLMTSFISSSFSFDSLSLPLIMLSFWISLLMVLASYKVFKSNKNSKLFT 91

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  81 S-----LGFTVLSFCVNHCVVFWCVYELSMLPLLYLIFSESPYSERFLAGWYFCGYLLSTSLPLILILLYLSLINDSFLF 155
Cdd:MTH00205  92 VsvimlLLILILSFSVDNLLLFYITFEASLIPTLILILGWGYQPERLQASMYMMMYTLCASLPLLIGLFFLNSLNFSLSM 171

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 156 SEWGYDSSVSLIVYYLLSFI---FFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFSSGFLWYL 232
Cdd:MTH00205 172 FFNFPLNFSDFYLFLYWIFLmlaFLVKLPMYFVHLWLPKAHVEAPVSGSMILAGVLLKLGGYGLIRITSMLYKLNSNFSE 251

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 233 FLCCILSIFFLVTS---CSELDGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFYDTSHT 309
Cdd:MTH00205 252 LFFSISLWGGVMTGmicLRQVDLKSLIAYSSVGHMGLMVVGVFSNTSWGMNGAIIMMVAHGLCSSGMFALANVNYERTNS 331

                        330       340
                 ....*....|....*....|....*
gi 242610090 310 RNWILLKSSINGIGLMSIVVFSLLS 334
Cdd:MTH00205 332 RSMLMNKGVLNTFPFLVLMWFLLIS 356
PRK06473 PRK06473
NADH-quinone oxidoreductase subunit M;
176-320 1.33e-08

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 235810 [Multi-domain]  Cd Length: 500  Bit Score: 56.63  E-value: 1.33e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 176 FFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFSSGFL----WYLFLCCILSIFFLVTSCSELD 251
Cdd:PRK06473 215 FGIKIPLVPFHTWLPDAHVEASTPVSVLLAGVLLKLGTYGLLRFGVGLFPEAWVylapWLATWAVVSVLYGASCAIAQKD 294

                         90       100       110       120       130       140
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 242610090 252 GKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFYDTSHTRNWILLKSSIN 320
Cdd:PRK06473 295 MKKMVAYSSIGHMGYILLAAAAATPLSILAAVFQMISHGLISALLFLLVGVVYKKTGSRDVDVLRGLLN 363
ND4 MTH00150
NADH dehydrogenase subunit 4; Provisional
 23-378 2.28e-08

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214435 [Multi-domain]  Cd Length: 417  Bit Score: 55.62  E-value: 2.28e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  23 FSCGINCMSIFSMNVFNGMFIFDSISFYLIILVLLLGLYSQIMFYSMLSDVVRMYLFFSL-----GFTVLSFCVNHCVVF 97
Cdd:MTH00150   1 LSLLLLYSSFSSYESLSELFSVDSMSSLLISLSLWISGLMMLASQKSVKLRNKSSSFSLLvlllcLILVLAFSVSSLLMF 80

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  98 WCVYELSMLPLLYLIFSESPYSERFLAGWYFCGYLLSTSLPLILILLYLSLINDSF---LFSEWGYDSSVSLIVYYLLSF 174
Cdd:MTH00150  81 YFFFEASLIPTLLLILGWGYQPERLQAGMYMMLYTVGASLPLLLVILWMSSSYGSSfmlLISSLRKLLSSMGLWGLLVFL 160

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 175 IFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFSSGFLWYLFLCCILSIFFLVTSC---SELD 251
Cdd:MTH00150 161 AFLVKLPMYPFHLWLPKAHVEAPVAGSMILAGILLKLGGYGILRMMMVFSLSSSSFSIFLISLSLWGGVLTSLiclRQSD 240

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 252 GKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFYDTSHTRNWILLKSSINGIGLMSIVVFS 331
Cdd:MTH00150 241 VKSLIAYSSVGHMSLVLAGVLSNTSWGWVGALIMMVSHGFCSSGLFCLANYTYEKVHSRSLFLSKGMLMLYPSLSLWWFL 320

                        330       340       350       360
                 ....*....|....*....|....*....|....*....|....*....
gi 242610090 332 LLSL-CSFPTTIQFFCEVGLVSQSFGFLAYLLFWC-FYLFFGGLVPLVL 378
Cdd:MTH00150 321 FCIInMAAPPSLNLLSEIMIFPSLISYSPWFFVPLgLMVFLSGLYSLYL 369
HyfB COG0651
Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy ...
 161-362 2.45e-08

Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter, MnhD subunit [Energy production and conversion, Inorganic ion transport and metabolism];


Pssm-ID: 440416 [Multi-domain]  Cd Length: 430  Bit Score: 55.54  E-value: 2.45e-08
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 161 DSSVSLIVYYLLSFIFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFSSGFLWY----LFLCC 236
Cdd:COG0651  200 DPGLLLAAFALLLVGFGIKAALFPLHFWLPDAYPAAPSPVSALLSGLLTKVGVYAILRVLTLLFGADPALFlgtlLLVLG 279

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 237 ILSIFFLVTS-CSELDGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFYDTSHTRNWILL 315
Cdd:COG0651  280 LLTMLVGALGaLAQRDLKRLLAYSSVSQIGYILLGLGLGTPLGLAGALFHLLNHALAKALLFLAAGAIERATGTRDLDKL 359

                        170       180       190       200
                 ....*....|....*....|....*....|....*....|....*...
gi 242610090 316 KSSINGIGLMSIVVF-SLLSLCSFPTTIQFFCEVGLVSQSFGFLAYLL 362
Cdd:COG0651  360 GGLGKRMPLTAAAFLiGALALAGLPPLSGFVSKWLLLQAALEAGAWLL 407
PRK08667 PRK08667
hydrogenase membrane subunit; Validated
 80-270 1.20e-07

hydrogenase membrane subunit; Validated


Pssm-ID: 236331 [Multi-domain]  Cd Length: 644  Bit Score: 53.97  E-value: 1.20e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  80 FSLGFTVLSFCVNHCVVFWcvyELSMLPLLYLIFSESPYSERFLAGWYFCGYLLSTSLPLILILLYLSLINDSFLFSEWG 159
Cdd:PRK08667 122 LSMLGVVASANTFSFLFFW---EIMALSSFFLVMNDYQEEETQRAGIFYFVMTQLSTVFLMLGIIVLFIQTGSFELSPLG 198

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 160 YDSSVSLIVYYLLSFIFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFSSGFLW---YLFLCC 236
Cdd:PRK08667 199 ASAGILSLVFLLLFLGFGIKAGIIPFHKWLPYAHPASPSNVSALMSGVMLKVAVYGLVRFLMDVLSPELWWgvlILLAGS 278

                        170       180       190
                 ....*....|....*....|....*....|....
gi 242610090 237 ILSIFFLVTSCSELDGKRWLAFLSLAHIVVPFLG 270
Cdd:PRK08667 279 ISALLGVIYALKEHDLKGLLAYSSIENIGIILMG 312
PRK08375 PRK08375
putative monovalent cation/H+ antiporter subunit D; Reviewed
 166-351 1.28e-07

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 236251 [Multi-domain]  Cd Length: 487  Bit Score: 53.73  E-value: 1.28e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 166 LIVYYLLSFIFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRC------ASFIFSSGFLWYLFLCCILS 239
Cdd:PRK08375 202 VTAFGFVLLALALKAAVFPLHTWLPRAYPAAPPVVTALLSGLVTKVAVYALIRIyftvfgGDFRFALGLGWLLAVLALLS 281

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 240 IFFLVTSC-SELDGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFYDTSHTRNwillKSS 318
Cdd:PRK08375 282 MLVGSLAAlGQDDVKRVLAYSTVSQMGYILLGLALLTPLALAAGLLHLLHHALMKGALFLAAGAIEVTYGTRR----LSE 357

                        170       180       190
                 ....*....|....*....|....*....|....*...
gi 242610090 319 INGIG-----LMSIVVFSLLSLCSFPTTIQFFCEVGLV 351
Cdd:PRK08375 358 LSGLGrrmplTAAAFAVASLSLIGVPPTSGFVSKWYLV 395
ND4 MTH00044
NADH dehydrogenase subunit 4; Validated
 77-327 4.97e-07

NADH dehydrogenase subunit 4; Validated


Pssm-ID: 214411 [Multi-domain]  Cd Length: 458  Bit Score: 51.51  E-value: 4.97e-07
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  77 YLFFSLGFTVLSFCVNHCVVFWCVYELSMLPLLYLIFSESPYSERFLAGWYFCGYLLSTSLPLILILLYLSLINDS--FL 154
Cdd:MTH00044  99 LIIIILTALIITFSSLELILFYIAFETTLIPTLILITRWGAQKERIQAGLYFLFYTLFGSLPLLISLIAIYSSSSSlsIP 178

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 155 FSEWGYDSSVSLIVYYLLSFI----FFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCAS-FIFSSGFL 229
Cdd:MTH00044 179 LSELNWLTSLSSNSSSIWWIFcilaFLVKMPIYGFHLWLPKAHVEAPVAGSMILAAILLKLGGYGLIRLINlFSLPSANN 258

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 230 WYLFL---CCILSIFFLVTSCSELDGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFYDT 306
Cdd:MTH00044 259 ISFILivfCCWGALITSIICLRQTDLKALIAYSSVGHMSLVAAGIFSGTNWGINGALILMIAHGLVSSALFCLANILYER 338

                        250       260
                 ....*....|....*....|.
gi 242610090 307 SHTRNWILLKSSINGIGLMSI 327
Cdd:MTH00044 339 SGTRTLSITRGFKLITPLLPL 359
ND4 MTH00127
NADH dehydrogenase subunit 4; Provisional
 84-330 1.34e-06

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177186 [Multi-domain]  Cd Length: 459  Bit Score: 50.34  E-value: 1.34e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  84 FTVLSFCVNHCVVFWCVYELSMLPLLYLIFSESPYSERFLAGWYFCGYLLSTSLPLILILLYLSLINDSFLFSEWGYDSS 163
Cdd:MTH00127 106 FLILAFGATEIIMFYVMFEATLIPTLIIITRWGNQTERLNAGTYFLFYTLAGSLPLLVALLLLQNSTGTLSMLTLQYSQP 185

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 164 VSLIVYY--------LLSFIFftKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFS-SGFLWYLFL 234
Cdd:MTH00127 186 LQLSSWAdklwwagcLLAFLV--KMPLYGVHLWLPKAHVEAPIAGSMVLAAVLLKLGGYGMMRMMVMLDPlTKELSYPFI 263

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 235 ccILSIFFLVTSCS----ELDGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFYDTSHTR 310
Cdd:MTH00127 264 --ILALWGIIMTGSiclrQTDLKSLIAYSSVSHMGLVAGGILIQTPWGFTGALILMIAHGLTSSALFCLANTNYERTHSR 341

                        250       260
                 ....*....|....*....|
gi 242610090 311 NWILLKSSINGIGLMSIVVF 330
Cdd:MTH00127 342 TMLLARGLQMILPLMATWWF 361
PRK06458 PRK06458
hydrogenase 4 subunit F; Validated
 172-271 1.50e-06

hydrogenase 4 subunit F; Validated


Pssm-ID: 235805 [Multi-domain]  Cd Length: 490  Bit Score: 50.31  E-value: 1.50e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 172 LSFIFF-----TKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCasFIFSSGFLWYLFLCCILSIFFLVTS 246
Cdd:PRK06458 215 LAFVFLligfgTKVGLFPMHAWLPDAHSEAPSPVSALLSGVLLNVALYAVLRY--YILIDAAIGSDFPGRLLLIFGLLSV 292

                         90       100       110
                 ....*....|....*....|....*....|..
gi 242610090 247 C-------SELDGKRWLAFLSLAHIVVPFLGF 271
Cdd:PRK06458 293 LvaaffllRQRDIKRLFAYSSIEHMGLIAFAL 324
PRK12667 PRK12667
putative monovalent cation/H+ antiporter subunit D; Reviewed
 164-345 1.72e-06

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 237167 [Multi-domain]  Cd Length: 520  Bit Score: 49.97  E-value: 1.72e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 164 VSLIVYYLLSFIFFT-KVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFSSGFLWYLFLCCILSIFF 242
Cdd:PRK12667 220 LALGVALALALWAFTiKAAIFPNHFWLPDAHPAAPSPVSAMLSGLVVNVGAYAIIRFLYTIFGISPSLIDFRAALSPILI 299

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 243 LVTSCSEL----------DGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFYDTSHTRNW 312
Cdd:PRK12667 300 ILGAVSAIigalmmvvqkDVKRLLAYSTISHMGYIFMGIGIGTQLGLAAALFHIINHAIAKSLLFLASGVFIHAAGTRDI 379

                        170       180       190
                 ....*....|....*....|....*....|....
gi 242610090 313 ILLKSSINGIGLMSI-VVFSLLSLCSFPTTIQFF 345
Cdd:PRK12667 380 DELAGLGRKMPIASFaFLIGALSLVGIPPLNGFF 413
PRK07363 PRK07363
NADH-quinone oxidoreductase subunit M;
64-264 3.17e-06

NADH-quinone oxidoreductase subunit M;


Pssm-ID: 180945 [Multi-domain]  Cd Length: 501  Bit Score: 49.33  E-value: 3.17e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  64 IMFYSMLSDVVRMYLFFSLGFTVLS-----FCVNHCVVFWCVYELSMLPLlYLIFSESPYSERFLAGWYFCGYLLSTSLP 138
Cdd:PRK07363  94 IAIYSIGENTERPRLYYSLILLINGgiagaLLAQNLLLFFLFYELELIPF-YLLIAIWGGEKRGYASIKFLIYTAVSGLL 172

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 139 LILILLYLSLINDSFLF-----SEWGYDSSVSLIVYYLLSFIFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGL 213
Cdd:PRK07363 173 VLAAFLGIVWLSGSTSFdydaiSTQNLSLNTQLILLTGLLLGFGIKIPLVPLHTWLPDAYTEASPAVAILLGGVLAKLGT 252

                        170       180       190       200       210
                 ....*....|....*....|....*....|....*....|....*....|....*..
gi 242610090 214 LGVYRCASFIFSSGflWYLF------LCCILSIFFLVTSCSELDGKRWLAFLSLAHI 264
Cdd:PRK07363 253 YGLLRFGLQLFPQT--WSLVapglaiIGTISVIYGALSAIAQKDIKRMVAYSSIGHM 307
PRK08676 PRK08676
hydrogenase membrane subunit; Validated
 159-296 4.68e-06

hydrogenase membrane subunit; Validated


Pssm-ID: 181537 [Multi-domain]  Cd Length: 485  Bit Score: 48.60  E-value: 4.68e-06
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 159 GYDSSVSLIVYYLLSFIFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFSSG----FLWYLFL 234
Cdd:PRK08676 199 LLSPSVLGASFLFIFIGFLAKSGLVPFHTWLPAAYAKAPSVVSALLSGTVLNIGIYGILRLSALLRQSGaaeqFSNVLIG 278

                         90       100       110       120       130       140       150
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 235 CCILSIFFLVTSC-SELDGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGL-------SAGIV 296
Cdd:PRK08676 279 LGIFSIAVAAFSMlSQRNLKKLIAFSSIEHMGLMLLGIGIGTPLALFWMLFHMLAHSLvksglffSAGIL 348
PRK07234 PRK07234
putative monovalent cation/H+ antiporter subunit D; Reviewed
 176-362 3.57e-05

putative monovalent cation/H+ antiporter subunit D; Reviewed


Pssm-ID: 235978 [Multi-domain]  Cd Length: 470  Bit Score: 45.71  E-value: 3.57e-05
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 176 FFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFSSGFLWYLF--LCCILSIFFLVTscsELDGK 253
Cdd:PRK07234 194 LLVKGGIFVSGLWLPLTHSEAEPPVSALLSGVVVKAGVFPLVRCALDVPGLDLIVRIFgvGTALLGVLFALL---EKDLK 270

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 254 RWLAFLSLAHivvpfLGFYVSDWSninFSFFYCLGHGLsagiVFGLLWCFYDTSHTRNWILLKSSINGIGLMSIVVFSLL 333
Cdd:PRK07234 271 RMLAFSTISQ-----LGFILAAPL---VGGLYALAHGL----VKSTLFLCAGALPSRNFTELISQMLGIGKWIPLTMASF 338

                        170       180
                 ....*....|....*....|....*....
gi 242610090 334 SLCSFPTTIQFFCEVGLVSQSFGFLAYLL 362
Cdd:PRK07234 339 SIAGFPLLAGFVSKVLTLKNLLPWQAIAL 367
ND4 MTH00094
NADH dehydrogenase subunit 4; Provisional
 1-370 1.15e-04

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 177157 [Multi-domain]  Cd Length: 403  Bit Score: 44.13  E-value: 1.15e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090   1 MFFFISINSFLIILMCIFVSLlfscgincmsiFSMNVFNGMFIFDSISFYLIILVLLLGLYsqIMFYSMLSDVVRMYLFF 80
Cdd:MTH00094   4 LFFFSPFLFFLFLMFFSFLMF-----------NNYSWSGLFFFFDSFVFVLLIFMMVFILG--LVLLSEKNFNLLILSNL 70

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  81 SLGFTVLSFCVNHCVVFWCVYELSMLPLLYLIFSESPYSERFLAGWYFCGYLLSTSLPLILILLylsliNDSFLFSEWGY 160
Cdd:MTH00094  71 LILICLLFFVSSNMLMLYMFFELSMFPILIMILGYGSQIEKINSSYYLLFYAAFFSFPFLFVYL-----KNFFFFSLCYF 145

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 161 DSSVSLIVYYLLSFIFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRCASFIFSSGFLWYLFLCCILSI 240
Cdd:MTH00094 146 DFFLSWEMFFILSLSFMMKFPVYFLHLWLPKAHVEAPTTASMLLAGLLLKLGTAGFLRILGSLNFVYNNFWIIFSLLGMI 225

                        250       260       270       280       290       300       310       320
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 241 FFLVTSCSELDGKRWLAFLSLAHIVVPFLGFYVSDWSNINFSFFYCLGHGLSAGIVFGLLWCFYDTSHTRNWILLKSSIN 320
Cdd:MTH00094 226 LSSFCCVFQSDSKSLAAYSSVTHMSFLLLSLVYMSMSGKLSGLMMMLAHGYTSTLMFYLIGEFYHISKSRLIYFMNSFFS 305

                        330       340       350       360       370
                 ....*....|....*....|....*....|....*....|....*....|.
gi 242610090 321 GIGLMSIV-VFSLLSLCSFPTTIQFFCEVGLVSQSFGFLAYLLFWCFYLFF 370
Cdd:MTH00094 306 SSMFFGLIfSLVFLSNSGVPPSLSFFSEFLIISNSFMKNKFSFFFIFFYFL 356
ndhD CHL00011
NADH dehydrogenase subunit 4
 167-263 5.21e-04

NADH dehydrogenase subunit 4


Pssm-ID: 176954 [Multi-domain]  Cd Length: 498  Bit Score: 42.24  E-value: 5.21e-04
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 167 IVYYLLSFIFFT-KVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRC-------ASFIFSSgflWYLFLCCIL 238
Cdd:CHL00011 211 ILFYIGFLIAYAvKLPIIPLHTWLPDTHGEAHYSTCMLLAGILLKMGAYGLIRInmellphAHSIFSP---WLVIVGAIQ 287

                         90       100
                 ....*....|....*....|....*
gi 242610090 239 SIFFLVTSCSELDGKRWLAFLSLAH 263
Cdd:CHL00011 288 IIYAASTSLGQRNLKKRIAYSSVSH 312
PRK06521 PRK06521
hydrogenase 4 subunit B; Validated
 170-271 2.71e-03

hydrogenase 4 subunit B; Validated


Pssm-ID: 235820 [Multi-domain]  Cd Length: 667  Bit Score: 39.87  E-value: 2.71e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 170 YLLSFIFF-TKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRcASFIFSSGFLWY-----LFLCCILSIFFL 243
Cdd:PRK06521 213 FLLALFGFgAKAGLVPLHVWLPRAHPAAPSHVSALMSGVMLKVAIYGILR-VVFDLLGAPGWWwgvlvLALGAISAVLGV 291

                         90       100
                 ....*....|....*....|....*...
gi 242610090 244 VTSCSELDGKRWLAFLSLAHIVVPFLGF 271
Cdd:PRK06521 292 LYALAEHDLKRLLAYSTIENIGIIFVGL 319
ND4 MTH00068
NADH dehydrogenase subunit 4; Provisional
 85-326 5.08e-03

NADH dehydrogenase subunit 4; Provisional


Pssm-ID: 214417 [Multi-domain]  Cd Length: 458  Bit Score: 39.13  E-value: 5.08e-03
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090  85 TVLSFCVNHCVVFWCVYELSMLPLLYLIFSESPYSERFLAGWYFCGYLLSTSLPLILILLYLSLINDSFLFSEWGYDSSV 164
Cdd:MTH00068 106 LILAFSATELILFYIFFEATLIPTLIIITRWGNQEERLNAGTYFLFYTLAGSLPLLIALLILQNSLGSLSLILLELMSPM 185

                         90       100       110       120       130       140       150       160
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 165 SLIVYYLLSF------IFFTKVPLVPFHTWLPIVHAEAISIVSIFLSGYIMKLGLLGVYRcASFIFSSGFLWYLFLCCIL 238
Cdd:MTH00068 186 QLMTYTNKIWwlacllAFMVKMPLYGLHLWLPKAHVEAPIAGSMILAAVLLKLGGYGILR-ISILLTPLSKELSYPFIIL 264

                        170       180       190       200       210       220       230       240
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 242610090 239 SIF-FLVTS--CS-ELDGKRWLAFLSLAHI-VVPFLGFYVSDWSnINFSFFYCLGHGLSAGIVFGLLWCFYDTSHTRNWI 313
Cdd:MTH00068 265 ALWgVLMTSliCLrQTDLKSLIAYSSVSHMgLVIAAALIQTPWS-FSGAIILMISHGLTSSALFCLANTNYERTHSRTLL 343

                        250
                 ....*....|...
gi 242610090 314 LLKSSINGIGLMS 326
Cdd:MTH00068 344 LLRGAQTILPLMA 356
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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