|
Name |
Accession |
Description |
Interval |
E-value |
| TamB super family |
cl34519 |
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ... |
779-1380 |
2.28e-09 |
|
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
The actual alignment was detected with superfamily member COG2911:
Pssm-ID: 442155 [Multi-domain] Cd Length: 766 Bit Score: 62.36 E-value: 2.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 779 LSAPNLDIKTPGVDVQAPDIDIEAPSAKIKKPHVKLPKFNLSGPKIKGNADLDapDLDVKTPDLNLSApnlDVQTPGAHV 858
Cdd:COG2911 2 LSGGGLTLRDDGVDLEADRLRLDWSPLALLRGRLCIDELALSASLDGDRLRLD--NLDLDAPEGALSG---LLDLVQATL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 859 EVPDIDieAPSAKVKKPHFNLPKINLpgpKIKGK--PDLDAPNLDVNAPELNLSAPNLDIKTPGVDVQAPDiDIETPSAM 936
Cdd:COG2911 77 DAEGLD--LASSALDDLDLRSGGNRL---TLSGNlsAASLDGDLDLDAPDLADLAALLPGLAGSLSGDGLD-SLSLDADG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 937 VYKPHvnlpKINLSGPKVKGKPDLDApTLDVNAPDLNLSAPGVDVQAPEIDIEAPSA-KIKKPFINLPKVNLKGakmkGP 1015
Cdd:COG2911 151 TLAQH----RLDLDAKGEPASLSLAL-SGGLDRDDGGTLSRLDFLNTGRWGLAAPATlSYDDGRVTLGPLCLAG----GG 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1016 DIDLNTQADLQGpDIDLKAPNLNLSAPKVNLPD---------------ANIKSPNVDLE---TPGIDLNVPEVDIDAPSG 1077
Cdd:COG2911 222 SLCLSGTLGGTL-DLQLRLKNLPLALLNPFLPDdlglsgtlngdadlsGGLANPQGDASlslSGDLTLNDGLGGLPLGLG 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1078 KVKIphykmpKFGLSGPRVKTekvevpDVDLNIPKAELKGLNAGVKSPDLSLSTPKIKGDISAPSLNVGLPDADLKAPTA 1157
Cdd:COG2911 301 DLTL------NARLANGRLTL------DLTLDGGGLGTLSLSGSVPLADGLPPSAPLDGNLRLDNLDLALLNPLLPGVLE 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1158 NIGGSLESpNLNIS----KPNVD--LNLPKAEFQGPDANLKVPDVDINApsakpkmpHFKLPKLNLSAQKMKGPE--LDA 1229
Cdd:COG2911 369 RLSGQLNG-DLRLSgtlaAPQLNgqLTLDDGRLKLPALGVRLTDINLRL--------RFDGDRLTLDGLTADSGGgtLTL 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1230 NTDLSLSAPKLEGELKTPAVDLNLpkadVNATLPKAEVSvPNVDIKSPdLESPSVKLKqLKIkkPKADLSVPKVQTSGID 1309
Cdd:COG2911 440 SGTVDLDGLSWPADLTLKGDNLRV----LNPPDYTATVS-GDLTLTGT-PDGPTLSGN-VTV--PRARITLPELPPSAVS 510
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1310 INAEAPDLNLSAPKIGTPDADLSLPNAGVDVDV----------------------------PTLDADVKVPKGKLKFPTM 1361
Cdd:COG2911 511 LSDDVVVVNRPPEPVPEEEAAGLPLDLDLNVNLgddvrvrgfgldarlggdlrltgtpggaPRLTGEINLVRGRYNAYGQ 590
|
650 660
....*....|....*....|....*
gi 292623153 1362 R------KLNFSGPKVkSPDVDIAA 1380
Cdd:COG2911 591 RltiergSITFNGPPL-DPYLDIEA 614
|
|
| TamB super family |
cl34519 |
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ... |
440-975 |
7.26e-09 |
|
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
The actual alignment was detected with superfamily member COG2911:
Pssm-ID: 442155 [Multi-domain] Cd Length: 766 Bit Score: 60.44 E-value: 7.26e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 440 LSAPNLDIQTPGAHVQAPDIDIEAPSAKVKKPHVKMPKWSLSGPKMKGKADLDVPDLDVKAPDLN--LTTPNLDVKAPDL 517
Cdd:COG2911 2 LSGGGLTLRDDGVDLEADRLRLDWSPLALLRGRLCIDELALSASLDGDRLRLDNLDLDAPEGALSglLDLVQATLDAEGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 518 NLSA---PNLDIETPGAHVQA----------PDIDIEAPSakikkphvkMPKLNLSGPKIKGNADLDAPD---------- 574
Cdd:COG2911 82 DLASsalDDLDLRSGGNRLTLsgnlsaasldGDLDLDAPD---------LADLAALLPGLAGSLSGDGLDslsldadgtl 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 575 ------LDVKAP----DLNLTApNLNVQTPGAHVEVPDIDieAPSAKLKKP---TVNMPKINLSGPKIKGKPDLDVP--- 638
Cdd:COG2911 153 aqhrldLDAKGEpaslSLALSG-GLDRDDGGTLSRLDFLN--TGRWGLAAPatlSYDDGRVTLGPLCLAGGGSLCLSgtl 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 639 ------NLDVKSPDLNLSAP--------------NLDIQTPGAHVQApDIDIEAP-SAKIKKPHVKLP--------KFNL 689
Cdd:COG2911 230 ggtldlQLRLKNLPLALLNPflpddlglsgtlngDADLSGGLANPQG-DASLSLSgDLTLNDGLGGLPlglgdltlNARL 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 690 SGPKIKGNADLDAPDLDVkaPDLNLSAPNLDVQTPGAHVEVpDIDIEAPSAKVKKPHFNLPKMNLSGP-----KIKGkpD 764
Cdd:COG2911 309 ANGRLTLDLTLDGGGLGT--LSLSGSVPLADGLPPSAPLDG-NLRLDNLDLALLNPLLPGVLERLSGQlngdlRLSG--T 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 765 LDAPNLD--VNAPDLNLSAPNLdiktpGVDVQAPDIDIEAPSAKIKkphvkLPKFNLSGPK----IKGNADLDAPDLDVk 838
Cdd:COG2911 384 LAAPQLNgqLTLDDGRLKLPAL-----GVRLTDINLRLRFDGDRLT-----LDGLTADSGGgtltLSGTVDLDGLSWPA- 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 839 tpDLNLSAPNLDV-QTPGAHVEV-PDIDIEAPsakvkkphfnlpkinLPGPKIKGkpDLDAPNLDVNAPELNLSAPNLDI 916
Cdd:COG2911 453 --DLTLKGDNLRVlNPPDYTATVsGDLTLTGT---------------PDGPTLSG--NVTVPRARITLPELPPSAVSLSD 513
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 917 KTPGVDVQAPDIDIETPSAMvyKPHVNLpKINLsGPKVKgkpdLDAPTLDVN-APDLNLS 975
Cdd:COG2911 514 DVVVVNRPPEPVPEEEAAGL--PLDLDL-NVNL-GDDVR----VRGFGLDARlGGDLRLT 565
|
|
| Herpes_BLLF1 super family |
cl37540 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
322-536 |
1.51e-05 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
The actual alignment was detected with superfamily member pfam05109:
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 49.91 E-value: 1.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 322 TFGHKV---KAPEAgldvSASKPDLNLSApnidgdISIPNTRVNLPKAD------------------VDVKAPNVDIHTS 380
Cdd:pfam05109 414 TTTHKVifsKAPES----TTTSPTLNTTG------FAAPNTTTGLPSSThvptnltapastgptvstADVTSPTPAGTTS 483
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 381 STKPKFPTlkmPKINLHKSKVKTPDlnadlnMSSPEVEMNLPKAKLDAPNLDVKAPNLNLSAPNLDIQTPGAHVQAPdid 460
Cdd:pfam05109 484 GASPVTPS---PSPRDNGTESKAPD------MTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTTP--- 551
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 292623153 461 ieAPSAKVKKPHVKMPKWSLSGPKMkGKADldvPDLDVKAPDLNLTTPNLDVKAPDLNLSAPNLDIETPGAHVQAP 536
Cdd:pfam05109 552 --TPNATSPTPAVTTPTPNATIPTL-GKTS---PTSAVTTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSP 621
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| TamB |
COG2911 |
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ... |
779-1380 |
2.28e-09 |
|
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442155 [Multi-domain] Cd Length: 766 Bit Score: 62.36 E-value: 2.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 779 LSAPNLDIKTPGVDVQAPDIDIEAPSAKIKKPHVKLPKFNLSGPKIKGNADLDapDLDVKTPDLNLSApnlDVQTPGAHV 858
Cdd:COG2911 2 LSGGGLTLRDDGVDLEADRLRLDWSPLALLRGRLCIDELALSASLDGDRLRLD--NLDLDAPEGALSG---LLDLVQATL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 859 EVPDIDieAPSAKVKKPHFNLPKINLpgpKIKGK--PDLDAPNLDVNAPELNLSAPNLDIKTPGVDVQAPDiDIETPSAM 936
Cdd:COG2911 77 DAEGLD--LASSALDDLDLRSGGNRL---TLSGNlsAASLDGDLDLDAPDLADLAALLPGLAGSLSGDGLD-SLSLDADG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 937 VYKPHvnlpKINLSGPKVKGKPDLDApTLDVNAPDLNLSAPGVDVQAPEIDIEAPSA-KIKKPFINLPKVNLKGakmkGP 1015
Cdd:COG2911 151 TLAQH----RLDLDAKGEPASLSLAL-SGGLDRDDGGTLSRLDFLNTGRWGLAAPATlSYDDGRVTLGPLCLAG----GG 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1016 DIDLNTQADLQGpDIDLKAPNLNLSAPKVNLPD---------------ANIKSPNVDLE---TPGIDLNVPEVDIDAPSG 1077
Cdd:COG2911 222 SLCLSGTLGGTL-DLQLRLKNLPLALLNPFLPDdlglsgtlngdadlsGGLANPQGDASlslSGDLTLNDGLGGLPLGLG 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1078 KVKIphykmpKFGLSGPRVKTekvevpDVDLNIPKAELKGLNAGVKSPDLSLSTPKIKGDISAPSLNVGLPDADLKAPTA 1157
Cdd:COG2911 301 DLTL------NARLANGRLTL------DLTLDGGGLGTLSLSGSVPLADGLPPSAPLDGNLRLDNLDLALLNPLLPGVLE 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1158 NIGGSLESpNLNIS----KPNVD--LNLPKAEFQGPDANLKVPDVDINApsakpkmpHFKLPKLNLSAQKMKGPE--LDA 1229
Cdd:COG2911 369 RLSGQLNG-DLRLSgtlaAPQLNgqLTLDDGRLKLPALGVRLTDINLRL--------RFDGDRLTLDGLTADSGGgtLTL 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1230 NTDLSLSAPKLEGELKTPAVDLNLpkadVNATLPKAEVSvPNVDIKSPdLESPSVKLKqLKIkkPKADLSVPKVQTSGID 1309
Cdd:COG2911 440 SGTVDLDGLSWPADLTLKGDNLRV----LNPPDYTATVS-GDLTLTGT-PDGPTLSGN-VTV--PRARITLPELPPSAVS 510
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1310 INAEAPDLNLSAPKIGTPDADLSLPNAGVDVDV----------------------------PTLDADVKVPKGKLKFPTM 1361
Cdd:COG2911 511 LSDDVVVVNRPPEPVPEEEAAGLPLDLDLNVNLgddvrvrgfgldarlggdlrltgtpggaPRLTGEINLVRGRYNAYGQ 590
|
650 660
....*....|....*....|....*
gi 292623153 1362 R------KLNFSGPKVkSPDVDIAA 1380
Cdd:COG2911 591 RltiergSITFNGPPL-DPYLDIEA 614
|
|
| TamB |
COG2911 |
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ... |
440-975 |
7.26e-09 |
|
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442155 [Multi-domain] Cd Length: 766 Bit Score: 60.44 E-value: 7.26e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 440 LSAPNLDIQTPGAHVQAPDIDIEAPSAKVKKPHVKMPKWSLSGPKMKGKADLDVPDLDVKAPDLN--LTTPNLDVKAPDL 517
Cdd:COG2911 2 LSGGGLTLRDDGVDLEADRLRLDWSPLALLRGRLCIDELALSASLDGDRLRLDNLDLDAPEGALSglLDLVQATLDAEGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 518 NLSA---PNLDIETPGAHVQA----------PDIDIEAPSakikkphvkMPKLNLSGPKIKGNADLDAPD---------- 574
Cdd:COG2911 82 DLASsalDDLDLRSGGNRLTLsgnlsaasldGDLDLDAPD---------LADLAALLPGLAGSLSGDGLDslsldadgtl 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 575 ------LDVKAP----DLNLTApNLNVQTPGAHVEVPDIDieAPSAKLKKP---TVNMPKINLSGPKIKGKPDLDVP--- 638
Cdd:COG2911 153 aqhrldLDAKGEpaslSLALSG-GLDRDDGGTLSRLDFLN--TGRWGLAAPatlSYDDGRVTLGPLCLAGGGSLCLSgtl 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 639 ------NLDVKSPDLNLSAP--------------NLDIQTPGAHVQApDIDIEAP-SAKIKKPHVKLP--------KFNL 689
Cdd:COG2911 230 ggtldlQLRLKNLPLALLNPflpddlglsgtlngDADLSGGLANPQG-DASLSLSgDLTLNDGLGGLPlglgdltlNARL 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 690 SGPKIKGNADLDAPDLDVkaPDLNLSAPNLDVQTPGAHVEVpDIDIEAPSAKVKKPHFNLPKMNLSGP-----KIKGkpD 764
Cdd:COG2911 309 ANGRLTLDLTLDGGGLGT--LSLSGSVPLADGLPPSAPLDG-NLRLDNLDLALLNPLLPGVLERLSGQlngdlRLSG--T 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 765 LDAPNLD--VNAPDLNLSAPNLdiktpGVDVQAPDIDIEAPSAKIKkphvkLPKFNLSGPK----IKGNADLDAPDLDVk 838
Cdd:COG2911 384 LAAPQLNgqLTLDDGRLKLPAL-----GVRLTDINLRLRFDGDRLT-----LDGLTADSGGgtltLSGTVDLDGLSWPA- 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 839 tpDLNLSAPNLDV-QTPGAHVEV-PDIDIEAPsakvkkphfnlpkinLPGPKIKGkpDLDAPNLDVNAPELNLSAPNLDI 916
Cdd:COG2911 453 --DLTLKGDNLRVlNPPDYTATVsGDLTLTGT---------------PDGPTLSG--NVTVPRARITLPELPPSAVSLSD 513
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 917 KTPGVDVQAPDIDIETPSAMvyKPHVNLpKINLsGPKVKgkpdLDAPTLDVN-APDLNLS 975
Cdd:COG2911 514 DVVVVNRPPEPVPEEEAAGL--PLDLDL-NVNL-GDDVR----VRGFGLDARlGGDLRLT 565
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
322-536 |
1.51e-05 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 49.91 E-value: 1.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 322 TFGHKV---KAPEAgldvSASKPDLNLSApnidgdISIPNTRVNLPKAD------------------VDVKAPNVDIHTS 380
Cdd:pfam05109 414 TTTHKVifsKAPES----TTTSPTLNTTG------FAAPNTTTGLPSSThvptnltapastgptvstADVTSPTPAGTTS 483
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 381 STKPKFPTlkmPKINLHKSKVKTPDlnadlnMSSPEVEMNLPKAKLDAPNLDVKAPNLNLSAPNLDIQTPGAHVQAPdid 460
Cdd:pfam05109 484 GASPVTPS---PSPRDNGTESKAPD------MTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTTP--- 551
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 292623153 461 ieAPSAKVKKPHVKMPKWSLSGPKMkGKADldvPDLDVKAPDLNLTTPNLDVKAPDLNLSAPNLDIETPGAHVQAP 536
Cdd:pfam05109 552 --TPNATSPTPAVTTPTPNATIPTL-GKTS---PTSAVTTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSP 621
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
494-691 |
3.58e-05 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 48.76 E-value: 3.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 494 PDLDVKAPDLNLT---TPNLDVKAPD-----LNLSAPnldiETPGAHVQAPDIDIEAPSAKIK--KPHVKMPKLNLSGPK 563
Cdd:pfam05109 425 PESTTTSPTLNTTgfaAPNTTTGLPSsthvpTNLTAP----ASTGPTVSTADVTSPTPAGTTSgaSPVTPSPSPRDNGTE 500
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 564 IKGnADLDAPDLDVKAPDLNLTAPNLNVQTPGAHVEVPDIDIEAPSAKLKKPTvnmpkinlsgpkikgkPDLDVPNLDVK 643
Cdd:pfam05109 501 SKA-PDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTTPT----------------PNATSPTPAVT 563
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 292623153 644 SPDLNLSAPNLDIQTPGAHVQAPDIDIEAPSAKIKKPHVKLPKFNLSG 691
Cdd:pfam05109 564 TPTPNATIPTLGKTSPTSAVTTPTPNATSPTVGETSPQANTTNHTLGG 611
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
832-1009 |
1.33e-04 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 46.83 E-value: 1.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 832 APDLDVKTPDLN---LSAPNLDVQTP---------------GAHVEVPDIDIEAPSAKVKKPHfnlPKINLPGPKIKGK- 892
Cdd:pfam05109 424 APESTTTSPTLNttgFAAPNTTTGLPssthvptnltapastGPTVSTADVTSPTPAGTTSGAS---PVTPSPSPRDNGTe 500
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 893 ---PDLDAPNLDVNAPELNLSAPNLDIKTPGVDVQAPDIDIETPSAMvykphVNLPKINLSGPkvkgKPDLDAPTLDVNA 969
Cdd:pfam05109 501 skaPDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSA-----VTTPTPNATSP----TPAVTTPTPNATI 571
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 292623153 970 PDLNLSAPGVDVQAPEIDIEAPSAKIKKPFINLPKVNLKG 1009
Cdd:pfam05109 572 PTLGKTSPTSAVTTPTPNATSPTVGETSPQANTTNHTLGG 611
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| TamB |
COG2911 |
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ... |
779-1380 |
2.28e-09 |
|
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442155 [Multi-domain] Cd Length: 766 Bit Score: 62.36 E-value: 2.28e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 779 LSAPNLDIKTPGVDVQAPDIDIEAPSAKIKKPHVKLPKFNLSGPKIKGNADLDapDLDVKTPDLNLSApnlDVQTPGAHV 858
Cdd:COG2911 2 LSGGGLTLRDDGVDLEADRLRLDWSPLALLRGRLCIDELALSASLDGDRLRLD--NLDLDAPEGALSG---LLDLVQATL 76
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 859 EVPDIDieAPSAKVKKPHFNLPKINLpgpKIKGK--PDLDAPNLDVNAPELNLSAPNLDIKTPGVDVQAPDiDIETPSAM 936
Cdd:COG2911 77 DAEGLD--LASSALDDLDLRSGGNRL---TLSGNlsAASLDGDLDLDAPDLADLAALLPGLAGSLSGDGLD-SLSLDADG 150
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 937 VYKPHvnlpKINLSGPKVKGKPDLDApTLDVNAPDLNLSAPGVDVQAPEIDIEAPSA-KIKKPFINLPKVNLKGakmkGP 1015
Cdd:COG2911 151 TLAQH----RLDLDAKGEPASLSLAL-SGGLDRDDGGTLSRLDFLNTGRWGLAAPATlSYDDGRVTLGPLCLAG----GG 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1016 DIDLNTQADLQGpDIDLKAPNLNLSAPKVNLPD---------------ANIKSPNVDLE---TPGIDLNVPEVDIDAPSG 1077
Cdd:COG2911 222 SLCLSGTLGGTL-DLQLRLKNLPLALLNPFLPDdlglsgtlngdadlsGGLANPQGDASlslSGDLTLNDGLGGLPLGLG 300
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1078 KVKIphykmpKFGLSGPRVKTekvevpDVDLNIPKAELKGLNAGVKSPDLSLSTPKIKGDISAPSLNVGLPDADLKAPTA 1157
Cdd:COG2911 301 DLTL------NARLANGRLTL------DLTLDGGGLGTLSLSGSVPLADGLPPSAPLDGNLRLDNLDLALLNPLLPGVLE 368
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1158 NIGGSLESpNLNIS----KPNVD--LNLPKAEFQGPDANLKVPDVDINApsakpkmpHFKLPKLNLSAQKMKGPE--LDA 1229
Cdd:COG2911 369 RLSGQLNG-DLRLSgtlaAPQLNgqLTLDDGRLKLPALGVRLTDINLRL--------RFDGDRLTLDGLTADSGGgtLTL 439
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1230 NTDLSLSAPKLEGELKTPAVDLNLpkadVNATLPKAEVSvPNVDIKSPdLESPSVKLKqLKIkkPKADLSVPKVQTSGID 1309
Cdd:COG2911 440 SGTVDLDGLSWPADLTLKGDNLRV----LNPPDYTATVS-GDLTLTGT-PDGPTLSGN-VTV--PRARITLPELPPSAVS 510
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1310 INAEAPDLNLSAPKIGTPDADLSLPNAGVDVDV----------------------------PTLDADVKVPKGKLKFPTM 1361
Cdd:COG2911 511 LSDDVVVVNRPPEPVPEEEAAGLPLDLDLNVNLgddvrvrgfgldarlggdlrltgtpggaPRLTGEINLVRGRYNAYGQ 590
|
650 660
....*....|....*....|....*
gi 292623153 1362 R------KLNFSGPKVkSPDVDIAA 1380
Cdd:COG2911 591 RltiergSITFNGPPL-DPYLDIEA 614
|
|
| TamB |
COG2911 |
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ... |
440-975 |
7.26e-09 |
|
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442155 [Multi-domain] Cd Length: 766 Bit Score: 60.44 E-value: 7.26e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 440 LSAPNLDIQTPGAHVQAPDIDIEAPSAKVKKPHVKMPKWSLSGPKMKGKADLDVPDLDVKAPDLN--LTTPNLDVKAPDL 517
Cdd:COG2911 2 LSGGGLTLRDDGVDLEADRLRLDWSPLALLRGRLCIDELALSASLDGDRLRLDNLDLDAPEGALSglLDLVQATLDAEGL 81
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 518 NLSA---PNLDIETPGAHVQA----------PDIDIEAPSakikkphvkMPKLNLSGPKIKGNADLDAPD---------- 574
Cdd:COG2911 82 DLASsalDDLDLRSGGNRLTLsgnlsaasldGDLDLDAPD---------LADLAALLPGLAGSLSGDGLDslsldadgtl 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 575 ------LDVKAP----DLNLTApNLNVQTPGAHVEVPDIDieAPSAKLKKP---TVNMPKINLSGPKIKGKPDLDVP--- 638
Cdd:COG2911 153 aqhrldLDAKGEpaslSLALSG-GLDRDDGGTLSRLDFLN--TGRWGLAAPatlSYDDGRVTLGPLCLAGGGSLCLSgtl 229
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 639 ------NLDVKSPDLNLSAP--------------NLDIQTPGAHVQApDIDIEAP-SAKIKKPHVKLP--------KFNL 689
Cdd:COG2911 230 ggtldlQLRLKNLPLALLNPflpddlglsgtlngDADLSGGLANPQG-DASLSLSgDLTLNDGLGGLPlglgdltlNARL 308
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 690 SGPKIKGNADLDAPDLDVkaPDLNLSAPNLDVQTPGAHVEVpDIDIEAPSAKVKKPHFNLPKMNLSGP-----KIKGkpD 764
Cdd:COG2911 309 ANGRLTLDLTLDGGGLGT--LSLSGSVPLADGLPPSAPLDG-NLRLDNLDLALLNPLLPGVLERLSGQlngdlRLSG--T 383
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 765 LDAPNLD--VNAPDLNLSAPNLdiktpGVDVQAPDIDIEAPSAKIKkphvkLPKFNLSGPK----IKGNADLDAPDLDVk 838
Cdd:COG2911 384 LAAPQLNgqLTLDDGRLKLPAL-----GVRLTDINLRLRFDGDRLT-----LDGLTADSGGgtltLSGTVDLDGLSWPA- 452
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 839 tpDLNLSAPNLDV-QTPGAHVEV-PDIDIEAPsakvkkphfnlpkinLPGPKIKGkpDLDAPNLDVNAPELNLSAPNLDI 916
Cdd:COG2911 453 --DLTLKGDNLRVlNPPDYTATVsGDLTLTGT---------------PDGPTLSG--NVTVPRARITLPELPPSAVSLSD 513
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 917 KTPGVDVQAPDIDIETPSAMvyKPHVNLpKINLsGPKVKgkpdLDAPTLDVN-APDLNLS 975
Cdd:COG2911 514 DVVVVNRPPEPVPEEEAAGL--PLDLDL-NVNL-GDDVR----VRGFGLDARlGGDLRLT 565
|
|
| TamB |
COG2911 |
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ... |
639-1207 |
8.75e-07 |
|
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442155 [Multi-domain] Cd Length: 766 Bit Score: 53.89 E-value: 8.75e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 639 NLDVKSPDLNLSAPNLDIQ-TPGA----HVQAPDIDIeapSAKIKKPHVKLPKFNLSGPKIKGNADLDAPDLDVKAPDLN 713
Cdd:COG2911 6 GLTLRDDGVDLEADRLRLDwSPLAllrgRLCIDELAL---SASLDGDRLRLDNLDLDAPEGALSGLLDLVQATLDAEGLD 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 714 LSA---PNLDVQTPGAHVEV----------PDIDIEAPsakvkkphfNLPKMNLSGPKIKGKPDLDA-PNLDVNApDLNL 779
Cdd:COG2911 83 LASsalDDLDLRSGGNRLTLsgnlsaasldGDLDLDAP---------DLADLAALLPGLAGSLSGDGlDSLSLDA-DGTL 152
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 780 SAPNLDIKTPGVDVQApDIDIEApSAKIKKPH--VKLPKFNLSGPKIKGNADLDAPDLDVKTPDLNLSApnldvqtpGAH 857
Cdd:COG2911 153 AQHRLDLDAKGEPASL-SLALSG-GLDRDDGGtlSRLDFLNTGRWGLAAPATLSYDDGRVTLGPLCLAG--------GGS 222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 858 VEVPDIDIEAPSAKVKKPHFNLPKINL---PGPKIKGKpdLDApNLDVNAPELNLSApNLDIKTPGvDVQAPDIDIETPS 934
Cdd:COG2911 223 LCLSGTLGGTLDLQLRLKNLPLALLNPflpDDLGLSGT--LNG-DADLSGGLANPQG-DASLSLSG-DLTLNDGLGGLPL 297
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 935 AMVykpHVNLpKINLSGPKVKGKPDLDAP-------TLDVNAPDLNLSAPGVDVQapeIDIEAPSAKIKKPFINLPKVNL 1007
Cdd:COG2911 298 GLG---DLTL-NARLANGRLTLDLTLDGGglgtlslSGSVPLADGLPPSAPLDGN---LRLDNLDLALLNPLLPGVLERL 370
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1008 KGAkmkgpdidLNTQADLQGPdidLKAPNLNLSapkVNLPDANIKSP---------NVDLETPGIDLNVPEVDIDAPSGK 1078
Cdd:COG2911 371 SGQ--------LNGDLRLSGT---LAAPQLNGQ---LTLDDGRLKLPalgvrltdiNLRLRFDGDRLTLDGLTADSGGGT 436
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1079 VKiphykmpkfgLSGpRVKTEKVEVP-DVDLNIPKAEL---KGLNAGVkSPDLSLS----TPKIKGDISAPSLNVGLPDA 1150
Cdd:COG2911 437 LT----------LSG-TVDLDGLSWPaDLTLKGDNLRVlnpPDYTATV-SGDLTLTgtpdGPTLSGNVTVPRARITLPEL 504
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1151 DLKAPTAN-----IGGSLESPNLNISKP-----NVDLNLPKA-EFQGPDANLKV-PDVDIN-APSAKPKM 1207
Cdd:COG2911 505 PPSAVSLSddvvvVNRPPEPVPEEEAAGlpldlDLNVNLGDDvRVRGFGLDARLgGDLRLTgTPGGAPRL 574
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
322-536 |
1.51e-05 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 49.91 E-value: 1.51e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 322 TFGHKV---KAPEAgldvSASKPDLNLSApnidgdISIPNTRVNLPKAD------------------VDVKAPNVDIHTS 380
Cdd:pfam05109 414 TTTHKVifsKAPES----TTTSPTLNTTG------FAAPNTTTGLPSSThvptnltapastgptvstADVTSPTPAGTTS 483
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 381 STKPKFPTlkmPKINLHKSKVKTPDlnadlnMSSPEVEMNLPKAKLDAPNLDVKAPNLNLSAPNLDIQTPGAHVQAPdid 460
Cdd:pfam05109 484 GASPVTPS---PSPRDNGTESKAPD------MTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTTP--- 551
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 292623153 461 ieAPSAKVKKPHVKMPKWSLSGPKMkGKADldvPDLDVKAPDLNLTTPNLDVKAPDLNLSAPNLDIETPGAHVQAP 536
Cdd:pfam05109 552 --TPNATSPTPAVTTPTPNATIPTL-GKTS---PTSAVTTPTPNATSPTVGETSPQANTTNHTLGGTSSTPVVTSP 621
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
494-691 |
3.58e-05 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 48.76 E-value: 3.58e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 494 PDLDVKAPDLNLT---TPNLDVKAPD-----LNLSAPnldiETPGAHVQAPDIDIEAPSAKIK--KPHVKMPKLNLSGPK 563
Cdd:pfam05109 425 PESTTTSPTLNTTgfaAPNTTTGLPSsthvpTNLTAP----ASTGPTVSTADVTSPTPAGTTSgaSPVTPSPSPRDNGTE 500
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 564 IKGnADLDAPDLDVKAPDLNLTAPNLNVQTPGAHVEVPDIDIEAPSAKLKKPTvnmpkinlsgpkikgkPDLDVPNLDVK 643
Cdd:pfam05109 501 SKA-PDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTTPT----------------PNATSPTPAVT 563
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 292623153 644 SPDLNLSAPNLDIQTPGAHVQAPDIDIEAPSAKIKKPHVKLPKFNLSG 691
Cdd:pfam05109 564 TPTPNATIPTLGKTSPTSAVTTPTPNATSPTVGETSPQANTTNHTLGG 611
|
|
| YhdR |
COG3164 |
Uncharacterized conserved protein YhdP, contains DUF3971 and AsmA2 domains [Function unknown]; |
405-846 |
3.79e-05 |
|
Uncharacterized conserved protein YhdP, contains DUF3971 and AsmA2 domains [Function unknown];
Pssm-ID: 442397 [Multi-domain] Cd Length: 1289 Bit Score: 48.77 E-value: 3.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 405 DLNADLNMSSPEVEMNLPKAKLdapnLDVKAPNLNLSAPNLDIQTPGAHVQApdiDIEAPSAKVKKPHVKMP-------- 476
Cdd:COG3164 596 DLDGDLLFDNNGLEIRADSGRL----LGVRLSNVTARIPDLSADKPVLTIDG---DASGPGADVLDYLQQSPladslgga 668
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 477 --KWSLSGPkMKGKADLDVP-----DLDVKApDLNLTTPNLDVKAPDL--------------NLSAPNL----------- 524
Cdd:COG3164 669 ldELQASGP-VSLDLKLDIPldgggDVKVDG-DVRLANNDLRLKPLDLtltqvrgrlrftegGLSAEGLqarllggpvtl 746
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 525 DIETpGAHVQAPDIDIEA----PSAKIKKphvKMPKLNLSGPKIKGNADLDApDLDVKAP-----DLNLTApNLNvqtpG 595
Cdd:COG3164 747 SIAT-GGQAGDGQVRVDLsgraSAAGLRA---WLPLPLPLLRRLSGSAPWQA-ELSIPLPgggqyELTLTS-DLK----G 816
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 596 AHVEVPdidieAPsakLKKP-TVNMP-KINLSGPKIKGKPDLDV---PNLDVkspDLNLSAPNLDIQtpGAHVQAPDIDI 670
Cdd:COG3164 817 LALDLP-----AP---LGKAaGEALPlRLEVSGDPESFRDRLDLslgDLLNA---RLLLDKGGGRLL--RGALALGSGAP 883
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 671 EAPSAKIKKPHVKLPKFNLSG-----PKIKGNADLDAPDLdvkAPD-LNLSAPNLDVQtpgahvevpDIDIEAPSAKVKK 744
Cdd:COG3164 884 PLPPAPGLSVSGRLPELDLDAwlallSALAGDASGSASPL---LPTrIDLRADQLDLG---------GQTLHDVRLSARR 951
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 745 PHfNLPKMNLSGPKIKGkpDLDAPNLDVNAP-DLNLSapNLDIktPGVDVQAPDIDIEAPSAKIKKPHVKLPKFNLS--- 820
Cdd:COG3164 952 QG-GGWRLQLDSPELAG--TLTWPPAAGAGPlRARLD--RLHL--PALEASEAGSAAGEPLADADVDPRSLPALDLVvdd 1024
|
490 500 510
....*....|....*....|....*....|....*...
gi 292623153 821 ---GPKIKGNADLDA---------PDLDVKTPDLNLSA 846
Cdd:COG3164 1025 lrlGGRDLGRLELEArpdgdglrlDKLRLDSPDARLTG 1062
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
398-597 |
5.96e-05 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 47.99 E-value: 5.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 398 KSKVKTPDLNADlNMSSPEVEMNLPKAkldapnldVKAPNlNLSAPnldiQTPGAHVQAPDIDIEAPSAKVKKPHVKMPK 477
Cdd:pfam05109 426 ESTTTSPTLNTT-GFAAPNTTTGLPSS--------THVPT-NLTAP----ASTGPTVSTADVTSPTPAGTTSGASPVTPS 491
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 478 WSLSGPKMKGKA-DLDVPDLDVKAPDLNLTTPNLDVKAPDLNLSAPNLDIETPGAHVQAPdidieAPSAKIKKPHVKMPK 556
Cdd:pfam05109 492 PSPRDNGTESKApDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTTP-----TPNATSPTPAVTTPT 566
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 292623153 557 LNLSGPKIKGNadldAPDLDVKAPDLNLTAPNLNVQTPGAH 597
Cdd:pfam05109 567 PNATIPTLGKT----SPTSAVTTPTPNATSPTVGETSPQAN 603
|
|
| AsmA |
pfam05170 |
AsmA family; The AsmA gene, whose product is involved in the assembly of outer membrane ... |
385-832 |
1.12e-04 |
|
AsmA family; The AsmA gene, whose product is involved in the assembly of outer membrane proteins in Escherichia coli. AsmA mutations were isolated as extragenic suppressors of an OmpF assembly mutant. AsmA may have a role in LPS biogenesis.
Pssm-ID: 428346 [Multi-domain] Cd Length: 607 Bit Score: 46.70 E-value: 1.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 385 KFPTLKMPKINLHKSKVKTPDLNADLNMSSpevemnlpkAKLDAPNLDVKAPNLnlSAPNLDIQTPGAHVQA-------- 456
Cdd:pfam05170 104 EIDSIRLDGAELALERLKQGNWNWQELIQN---------QQNQASNAPTQQPQP--TWPVAAWSLPIGRIQVsngqvtid 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 457 --------PDIDIEAPSAKVKKPHVKMPKWSLSG-------------------PKMKGKADLDVPDLDVKAPDLNLTTPN 509
Cdd:pfam05170 173 dkasqkilKDINLELQVSTLYGPSFNWSKITISGkgdqdpqsfgsqvnvtilsGEISGEALRGSTSTGGMLLLQTLSSPI 252
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 510 LDVKAPDLNLSapnlDIETPGAH-----VQAPDIDIEAPSAKIKKPHVKMPKLNLsgPKIKGNADLDAPDLDVKAPDLNL 584
Cdd:pfam05170 253 YHINSLKLLNA----QLELDGTLwdnlnLSIEDLDLKASGWKSITVNLALTADEL--DSLANQAELPGANLPDTPQNITL 326
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 585 TAPNLNVQTPGAHVEVpdidieapsaKLKKPTVNMPKINLSGPKIKGKPDLDVPNLDVKSP-----DLNLSAPNLDIQTP 659
Cdd:pfam05170 327 GELSLSFKTGRVQVSG----------SLNSLTLNLDYLSFDGKKWVGSSDIDLSNRLPQPQprpklRGKLSSPELDLDNL 396
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 660 GahvqapdIDIEAPSAKIKKPHVKLPKFNlsgpkikgnadldapdldvkAPDLNLSAPNLDVQTPGAHVEVPDIDIEAPS 739
Cdd:pfam05170 397 L-------PIKTAVAAKSRAPEWDASGLS--------------------ADGANLPLPVEPFLWGVWQGMDADVSANIDK 449
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 740 AKVKKPHFNLPKMNLSGpkIKGKPDLDAPNLDVNAPDLNLSApNLDIKTPGVDVQapdIDIEAPSAKIKKPHVKLPKFnl 819
Cdd:pfam05170 450 VTYSGLPISDLKTKLRS--EGGVLQLSRLKGGLYGGYLEAGA-QLDLSKKPATYR---LKINAKNIPLKPLLPDLFKM-- 521
|
490
....*....|...
gi 292623153 820 sgPKIKGNADLDA 832
Cdd:pfam05170 522 --FSTDGLLDIDA 532
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
832-1009 |
1.33e-04 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 46.83 E-value: 1.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 832 APDLDVKTPDLN---LSAPNLDVQTP---------------GAHVEVPDIDIEAPSAKVKKPHfnlPKINLPGPKIKGK- 892
Cdd:pfam05109 424 APESTTTSPTLNttgFAAPNTTTGLPssthvptnltapastGPTVSTADVTSPTPAGTTSGAS---PVTPSPSPRDNGTe 500
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 893 ---PDLDAPNLDVNAPELNLSAPNLDIKTPGVDVQAPDIDIETPSAMvykphVNLPKINLSGPkvkgKPDLDAPTLDVNA 969
Cdd:pfam05109 501 skaPDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSA-----VTTPTPNATSP----TPAVTTPTPNATI 571
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 292623153 970 PDLNLSAPGVDVQAPEIDIEAPSAKIKKPFINLPKVNLKG 1009
Cdd:pfam05109 572 PTLGKTSPTSAVTTPTPNATSPTVGETSPQANTTNHTLGG 611
|
|
| TamB |
COG2911 |
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, ... |
834-1447 |
2.79e-04 |
|
Autotransporter translocation and assembly protein TamB [Intracellular trafficking, secretion, and vesicular transport];
Pssm-ID: 442155 [Multi-domain] Cd Length: 766 Bit Score: 45.80 E-value: 2.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 834 DLDVKTPDLNLSAPNLDVQ-TPGA----HVEVPDIDIEApSAKVKKPHFNLPKINLPGPKIKGKPDLDAPNLDVNAPELN 908
Cdd:COG2911 6 GLTLRDDGVDLEADRLRLDwSPLAllrgRLCIDELALSA-SLDGDRLRLDNLDLDAPEGALSGLLDLVQATLDAEGLDLA 84
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 909 LSA-PNLDIKTPGVDVQA----------PDIDIETPsamvykphvNLPKINLSGPKVKGKPDLDAptldvnAPDLNLSAP 977
Cdd:COG2911 85 SSAlDDLDLRSGGNRLTLsgnlsaasldGDLDLDAP---------DLADLAALLPGLAGSLSGDG------LDSLSLDAD 149
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 978 GVDVQAP-EIDIEAPSAKIKkpfinlpkVNLKGAKMKGPDIDLNTQADLQGPDIDLKAPN-LNLSAPKVNLPDANIKSP- 1054
Cdd:COG2911 150 GTLAQHRlDLDAKGEPASLS--------LALSGGLDRDDGGTLSRLDFLNTGRWGLAAPAtLSYDDGRVTLGPLCLAGGg 221
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1055 --NVDLETPG---IDLNVPEVDIDapsgkvKIPHYKMPKFGLSGprvkteKVEVpDVDLNIPKAELKG-LNAGVkSPDLS 1128
Cdd:COG2911 222 slCLSGTLGGtldLQLRLKNLPLA------LLNPFLPDDLGLSG------TLNG-DADLSGGLANPQGdASLSL-SGDLT 287
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1129 LSTPKIKGDISAPSLNVglpDADLKAPTANIGGSLESPNLNISkpNVDLNLPKAEFQGPDANLKVpDVDINAPSAKPkmp 1208
Cdd:COG2911 288 LNDGLGGLPLGLGDLTL---NARLANGRLTLDLTLDGGGLGTL--SLSGSVPLADGLPPSAPLDG-NLRLDNLDLAL--- 358
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1209 hfklpkLNL----SAQKMKGpELDANTDLS--LSAPKLEGELktpavdlNLPKADVNATLPKAEVSVPNVDIkspDLESP 1282
Cdd:COG2911 359 ------LNPllpgVLERLSG-QLNGDLRLSgtLAAPQLNGQL-------TLDDGRLKLPALGVRLTDINLRL---RFDGD 421
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1283 SVKLKQLKIKKPKADLSVpkvqtSG-IDINAEAPDLNLsapkigtpdadlslpnagvdvdvpTLDADvkvpKGKLKFPTM 1361
Cdd:COG2911 422 RLTLDGLTADSGGGTLTL-----SGtVDLDGLSWPADL------------------------TLKGD----NLRVLNPPD 468
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1362 RKLNFSGpkvkspDVDIAADVSRPDLN---------LSPPGVDVNLPNTGVDVDVPSINAEVEGSKSKKKWPFNWRRSVE 1432
Cdd:COG2911 469 YTATVSG------DLTLTGTPDGPTLSgnvtvprarITLPELPPSAVSLSDDVVVVNRPPEPVPEEEAAGLPLDLDLNVN 542
|
650
....*....|....*
gi 292623153 1433 SkDGNVKIKAPEVDG 1447
Cdd:COG2911 543 L-GDDVRVRGFGLDA 556
|
|
| DUF4097 |
pfam13349 |
Putative adhesin; This has a putative all-beta structure with a twenty-residue repeat with a ... |
1267-1390 |
2.84e-04 |
|
Putative adhesin; This has a putative all-beta structure with a twenty-residue repeat with a highly conserved repeating GD, gly-asp, motif. It may form part of a bacterial adhesin.
Pssm-ID: 433135 [Multi-domain] Cd Length: 246 Bit Score: 44.24 E-value: 2.84e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1267 VSVPNVDIK--SPDLESPSVKLKQLKIKKPKADLSVPKVQTSGIDINAEAPDLNLSAPKIGTP--------DADLSLPNA 1336
Cdd:pfam13349 114 VSAENLTIKstSGDVSIDGSSAKKSKLITTSGDIDLNNVSGKDLDLKSTSGDINVSNTTIAGSlkitatsgDIDLSLPDS 193
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*
gi 292623153 1337 GVD-VDVPTLDADVKVPkGKLKFPTMRKLNFSGpKVKSPDVDIAADVSRPDLNLS 1390
Cdd:pfam13349 194 ASFgVDASSTSGDVTIP-YKFDEEGTEENRIYG-TNGNGKHKVDISTSSGDITVR 246
|
|
| AsmA |
pfam05170 |
AsmA family; The AsmA gene, whose product is involved in the assembly of outer membrane ... |
995-1335 |
6.10e-04 |
|
AsmA family; The AsmA gene, whose product is involved in the assembly of outer membrane proteins in Escherichia coli. AsmA mutations were isolated as extragenic suppressors of an OmpF assembly mutant. AsmA may have a role in LPS biogenesis.
Pssm-ID: 428346 [Multi-domain] Cd Length: 607 Bit Score: 44.39 E-value: 6.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 995 IKKPFINLPKVNLKGAKMKGPDIDLNTQADLQGPDIDLKApnLNLSAPKVNLPDANIKSPNVDLETPG-----IDLNVPE 1069
Cdd:pfam05170 56 IGRSLFPWPTLSLSDITLASPQGDATPLVSLEQVKISLSP--LPLLRKQIEIDSIRLDGAELALERLKqgnwnWQELIQN 133
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1070 VDIDAPSGKVKIPHYKMP----KFGLSGPRVKTEKVEV---------PDVDLNIPKAELKGlnagvksPDLSLSTPKIKG 1136
Cdd:pfam05170 134 QQNQASNAPTQQPQPTWPvaawSLPIGRIQVSNGQVTIddkasqkilKDINLELQVSTLYG-------PSFNWSKITISG 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1137 DISAPS------LNVGLPDADLK-APTANIGGSLESPNL-NISKPNVD---LNLPKAEFQGPDA-----NLKVPDVDINA 1200
Cdd:pfam05170 207 KGDQDPqsfgsqVNVTILSGEISgEALRGSTSTGGMLLLqTLSSPIYHinsLKLLNAQLELDGTlwdnlNLSIEDLDLKA 286
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 1201 PSAKPKMPHFKLPKLNLSAQKMKGPELDAN---TDLSLSAPKLEGELKTPAVDLNLPKADVNATLPKAEVSVPNVDIKSP 1277
Cdd:pfam05170 287 SGWKSITVNLALTADELDSLANQAELPGANlpdTPQNITLGELSLSFKTGRVQVSGSLNSLTLNLDYLSFDGKKWVGSSD 366
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 292623153 1278 DLESPSVKLKQlKIKKPKADLSVPKV-----QTSGIDINAEAPDLNLSAPKIGTPDADLSLPN 1335
Cdd:pfam05170 367 IDLSNRLPQPQ-PRPKLRGKLSSPELdldnlLPIKTAVAAKSRAPEWDASGLSADGANLPLPV 428
|
|
| Herpes_BLLF1 |
pfam05109 |
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ... |
702-886 |
6.11e-04 |
|
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.
Pssm-ID: 282904 [Multi-domain] Cd Length: 886 Bit Score: 44.52 E-value: 6.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 702 APDLDVKAPDLN---LSAPNLDVQTP---------------GAHVEVPDIDIEAPSAKVK--KPHFNLPKMNLSGPKIKG 761
Cdd:pfam05109 424 APESTTTSPTLNttgFAAPNTTTGLPssthvptnltapastGPTVSTADVTSPTPAGTTSgaSPVTPSPSPRDNGTESKA 503
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 292623153 762 kPDLDAPNLDVNAPDLNLSAPNLDIKTPGVDVQAPDIDIEAPSAKIKKPhvklpkfnlsgpkikgNADLDAPDLDVKTPD 841
Cdd:pfam05109 504 -PDMTSPTSAVTTPTPNATSPTPAVTTPTPNATSPTLGKTSPTSAVTTP----------------TPNATSPTPAVTTPT 566
|
170 180 190 200
....*....|....*....|....*....|....*....|....*
gi 292623153 842 LNLSAPNLDVQTPGAHVEVPDIDIEAPSAKVKKPHFNLPKINLPG 886
Cdd:pfam05109 567 PNATIPTLGKTSPTSAVTTPTPNATSPTVGETSPQANTTNHTLGG 611
|
|
| |
