uncharacterized protein LOC123208782 isoform X1 [Mangifera indica]
List of domain hits
Name | Accession | Description | Interval | E-value | |||||
NB-ARC super family | cl26397 | NB-ARC domain; |
209-455 | 7.69e-32 | |||||
NB-ARC domain; The actual alignment was detected with superfamily member pfam00931: Pssm-ID: 395745 [Multi-domain] Cd Length: 245 Bit Score: 125.57 E-value: 7.69e-32
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ZZ_ADA2 | cd02335 | Zinc finger, ZZ type. Zinc finger present in ADA2, a putative transcriptional adaptor, and ... |
1812-1859 | 4.87e-22 | |||||
Zinc finger, ZZ type. Zinc finger present in ADA2, a putative transcriptional adaptor, and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. : Pssm-ID: 239075 [Multi-domain] Cd Length: 49 Bit Score: 90.81 E-value: 4.87e-22
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LRR | COG4886 | Leucine-rich repeat (LRR) protein [Transcription]; |
615-743 | 1.37e-14 | |||||
Leucine-rich repeat (LRR) protein [Transcription]; : Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 78.05 E-value: 1.37e-14
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GvpP super family | cl44178 | Gas vesicle protein YhaH [General function prediction only]; |
37-95 | 2.49e-03 | |||||
Gas vesicle protein YhaH [General function prediction only]; The actual alignment was detected with superfamily member COG4980: Pssm-ID: 444004 [Multi-domain] Cd Length: 106 Bit Score: 39.18 E-value: 2.49e-03
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Name | Accession | Description | Interval | E-value | |||||
NB-ARC | pfam00931 | NB-ARC domain; |
209-455 | 7.69e-32 | |||||
NB-ARC domain; Pssm-ID: 395745 [Multi-domain] Cd Length: 245 Bit Score: 125.57 E-value: 7.69e-32
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ZZ_ADA2 | cd02335 | Zinc finger, ZZ type. Zinc finger present in ADA2, a putative transcriptional adaptor, and ... |
1812-1859 | 4.87e-22 | |||||
Zinc finger, ZZ type. Zinc finger present in ADA2, a putative transcriptional adaptor, and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Pssm-ID: 239075 [Multi-domain] Cd Length: 49 Bit Score: 90.81 E-value: 4.87e-22
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LRR | COG4886 | Leucine-rich repeat (LRR) protein [Transcription]; |
615-743 | 1.37e-14 | |||||
Leucine-rich repeat (LRR) protein [Transcription]; Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 78.05 E-value: 1.37e-14
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COG5114 | COG5114 | Histone acetyltransferase complex SAGA/ADA, subunit ADA2 [Chromatin structure and dynamics]; |
1811-1859 | 2.24e-14 | |||||
Histone acetyltransferase complex SAGA/ADA, subunit ADA2 [Chromatin structure and dynamics]; Pssm-ID: 227445 [Multi-domain] Cd Length: 432 Bit Score: 77.80 E-value: 2.24e-14
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ZnF_ZZ | smart00291 | Zinc-binding domain, present in Dystrophin, CREB-binding protein; Putative zinc-binding domain ... |
1811-1852 | 3.18e-09 | |||||
Zinc-binding domain, present in Dystrophin, CREB-binding protein; Putative zinc-binding domain present in dystrophin-like proteins, and CREB-binding protein/p300 homologues. The ZZ in dystrophin appears to bind calmodulin. A missense mutation of one of the conserved cysteines in dystrophin results in a patient with Duchenne muscular dystrophy. Pssm-ID: 197633 [Multi-domain] Cd Length: 44 Bit Score: 53.98 E-value: 3.18e-09
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ZZ | pfam00569 | Zinc finger, ZZ type; Zinc finger present in dystrophin, CBP/p300. ZZ in dystrophin binds ... |
1812-1843 | 5.53e-06 | |||||
Zinc finger, ZZ type; Zinc finger present in dystrophin, CBP/p300. ZZ in dystrophin binds calmodulin. Putative zinc finger; binding not yet shown. Four to six cysteine residues in its sequence are responsible for coordinating zinc ions, to reinforce the structure. Pssm-ID: 395451 Cd Length: 45 Bit Score: 44.78 E-value: 5.53e-06
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PLN00113 | PLN00113 | leucine-rich repeat receptor-like protein kinase; Provisional |
590-693 | 4.91e-04 | |||||
leucine-rich repeat receptor-like protein kinase; Provisional Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 45.22 E-value: 4.91e-04
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ABC_UvrA | cd03238 | ATP-binding cassette domain of the excision repair protein UvrA; Nucleotide excision repair in ... |
227-327 | 1.57e-03 | |||||
ATP-binding cassette domain of the excision repair protein UvrA; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep ATP-dependent reaction that requires the UvrA, UvrB, and UvrC proteins. Both UvrA and UvrB are ATPases, with UvrA having two ATP binding sites, which have the characteristic signature of the family of ABC proteins, and UvrB having one ATP binding site that is structurally related to that of helicases. Pssm-ID: 213205 [Multi-domain] Cd Length: 176 Bit Score: 41.54 E-value: 1.57e-03
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COG3903 | COG3903 | Predicted ATPase [General function prediction only]; |
230-317 | 1.63e-03 | |||||
Predicted ATPase [General function prediction only]; Pssm-ID: 443109 [Multi-domain] Cd Length: 933 Bit Score: 43.47 E-value: 1.63e-03
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GvpP | COG4980 | Gas vesicle protein YhaH [General function prediction only]; |
37-95 | 2.49e-03 | |||||
Gas vesicle protein YhaH [General function prediction only]; Pssm-ID: 444004 [Multi-domain] Cd Length: 106 Bit Score: 39.18 E-value: 2.49e-03
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Name | Accession | Description | Interval | E-value | |||||
NB-ARC | pfam00931 | NB-ARC domain; |
209-455 | 7.69e-32 | |||||
NB-ARC domain; Pssm-ID: 395745 [Multi-domain] Cd Length: 245 Bit Score: 125.57 E-value: 7.69e-32
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ZZ_ADA2 | cd02335 | Zinc finger, ZZ type. Zinc finger present in ADA2, a putative transcriptional adaptor, and ... |
1812-1859 | 4.87e-22 | |||||
Zinc finger, ZZ type. Zinc finger present in ADA2, a putative transcriptional adaptor, and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Pssm-ID: 239075 [Multi-domain] Cd Length: 49 Bit Score: 90.81 E-value: 4.87e-22
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LRR | COG4886 | Leucine-rich repeat (LRR) protein [Transcription]; |
615-743 | 1.37e-14 | |||||
Leucine-rich repeat (LRR) protein [Transcription]; Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 78.05 E-value: 1.37e-14
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COG5114 | COG5114 | Histone acetyltransferase complex SAGA/ADA, subunit ADA2 [Chromatin structure and dynamics]; |
1811-1859 | 2.24e-14 | |||||
Histone acetyltransferase complex SAGA/ADA, subunit ADA2 [Chromatin structure and dynamics]; Pssm-ID: 227445 [Multi-domain] Cd Length: 432 Bit Score: 77.80 E-value: 2.24e-14
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ZZ | cd02249 | Zinc finger, ZZ type. Zinc finger present in dystrophin, CBP/p300 and many other proteins. The ... |
1812-1860 | 5.03e-11 | |||||
Zinc finger, ZZ type. Zinc finger present in dystrophin, CBP/p300 and many other proteins. The ZZ motif coordinates one or two zinc ions and most likely participates in ligand binding or molecular scaffolding. Many proteins containing ZZ motifs have other zinc-binding motifs as well, and the majority serve as scaffolds in pathways involving acetyltransferase, protein kinase, or ubiqitin-related activity. ZZ proteins can be grouped into the following functional classes: chromatin modifying, cytoskeletal scaffolding, ubiquitin binding or conjugating, and membrane receptor or ion-channel modifying proteins. Pssm-ID: 239069 [Multi-domain] Cd Length: 46 Bit Score: 59.37 E-value: 5.03e-11
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ZnF_ZZ | smart00291 | Zinc-binding domain, present in Dystrophin, CREB-binding protein; Putative zinc-binding domain ... |
1811-1852 | 3.18e-09 | |||||
Zinc-binding domain, present in Dystrophin, CREB-binding protein; Putative zinc-binding domain present in dystrophin-like proteins, and CREB-binding protein/p300 homologues. The ZZ in dystrophin appears to bind calmodulin. A missense mutation of one of the conserved cysteines in dystrophin results in a patient with Duchenne muscular dystrophy. Pssm-ID: 197633 [Multi-domain] Cd Length: 44 Bit Score: 53.98 E-value: 3.18e-09
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ZZ_PCMF_like | cd02338 | Zinc finger, ZZ type. Zinc finger present in potassium channel modulatory factor (PCMF) 1 and ... |
1814-1859 | 5.03e-09 | |||||
Zinc finger, ZZ type. Zinc finger present in potassium channel modulatory factor (PCMF) 1 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Human potassium channel modulatory factor 1 or FIGC has been shown to possess intrinsic E3 ubiquitin ligase activity and to promote ubiquitination. Pssm-ID: 239078 Cd Length: 49 Bit Score: 53.50 E-value: 5.03e-09
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LRR | COG4886 | Leucine-rich repeat (LRR) protein [Transcription]; |
607-822 | 8.75e-09 | |||||
Leucine-rich repeat (LRR) protein [Transcription]; Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 59.95 E-value: 8.75e-09
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LRR | COG4886 | Leucine-rich repeat (LRR) protein [Transcription]; |
611-743 | 1.74e-08 | |||||
Leucine-rich repeat (LRR) protein [Transcription]; Pssm-ID: 443914 [Multi-domain] Cd Length: 414 Bit Score: 58.79 E-value: 1.74e-08
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ZZ_NBR1_like | cd02340 | Zinc finger, ZZ type. Zinc finger present in Drosophila ref(2)P, NBR1, Human sequestosome 1 ... |
1814-1857 | 1.54e-07 | |||||
Zinc finger, ZZ type. Zinc finger present in Drosophila ref(2)P, NBR1, Human sequestosome 1 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Drosophila ref(2)P appears to control the multiplication of sigma rhabdovirus. NBR1 (Next to BRCA1 gene 1 protein) interacts with fasciculation and elongation protein zeta-1 (FEZ1) and calcium and integrin binding protein (CIB), and may function in cell signalling pathways. Sequestosome 1 is a phosphotyrosine independent ligand for the Lck SH2 domain and binds noncovalently to ubiquitin via its UBA domain. Pssm-ID: 239080 Cd Length: 43 Bit Score: 49.18 E-value: 1.54e-07
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ZZ_dah | cd02345 | Zinc finger, ZZ type. Zinc finger present in Drosophila dah and related proteins. The ZZ motif ... |
1814-1855 | 1.67e-07 | |||||
Zinc finger, ZZ type. Zinc finger present in Drosophila dah and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dah (discontinuous actin hexagon) is a membrane associated protein essential for cortical furrow formation in Drosophila. Pssm-ID: 239085 Cd Length: 49 Bit Score: 49.51 E-value: 1.67e-07
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ZZ_dystrophin | cd02334 | Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif ... |
1814-1860 | 3.52e-06 | |||||
Zinc finger, ZZ type. Zinc finger present in dystrophin and dystrobrevin. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Dystrophin attaches actin filaments to an integral membrane glycoprotein complex in muscle cells. The ZZ domain in dystrophin has been shown to be essential for binding to the membrane protein beta-dystroglycan. Pssm-ID: 239074 Cd Length: 49 Bit Score: 45.81 E-value: 3.52e-06
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ZZ | pfam00569 | Zinc finger, ZZ type; Zinc finger present in dystrophin, CBP/p300. ZZ in dystrophin binds ... |
1812-1843 | 5.53e-06 | |||||
Zinc finger, ZZ type; Zinc finger present in dystrophin, CBP/p300. ZZ in dystrophin binds calmodulin. Putative zinc finger; binding not yet shown. Four to six cysteine residues in its sequence are responsible for coordinating zinc ions, to reinforce the structure. Pssm-ID: 395451 Cd Length: 45 Bit Score: 44.78 E-value: 5.53e-06
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ZZ_CBP | cd02337 | Zinc finger, ZZ type. Zinc finger present in CBP/p300 and related proteins. The ZZ motif ... |
1812-1858 | 8.21e-05 | |||||
Zinc finger, ZZ type. Zinc finger present in CBP/p300 and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. CREB-binding protein (CBP) is a large multidomain protein that provides binding sites for transcriptional coactivators, the role of the ZZ domain in CBP/p300 is unclear. Pssm-ID: 239077 Cd Length: 41 Bit Score: 41.39 E-value: 8.21e-05
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ZZ_Mind_bomb | cd02339 | Zinc finger, ZZ type. Zinc finger present in Drosophila Mind bomb (D-mib) and related proteins. ... |
1814-1842 | 2.70e-04 | |||||
Zinc finger, ZZ type. Zinc finger present in Drosophila Mind bomb (D-mib) and related proteins. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Mind bomb is an E3 ubiqitin ligase that has been shown to regulate signaling by the Notch ligand Delta in Drosophila melanogaster. Pssm-ID: 239079 Cd Length: 45 Bit Score: 40.13 E-value: 2.70e-04
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ZZ_EF | cd02343 | Zinc finger, ZZ type. Zinc finger present in proteins with an EF_hand motif. The ZZ motif ... |
1814-1855 | 3.79e-04 | |||||
Zinc finger, ZZ type. Zinc finger present in proteins with an EF_hand motif. The ZZ motif coordinates two zinc ions and most likely participates in ligand binding or molecular scaffolding. Pssm-ID: 239083 Cd Length: 48 Bit Score: 39.99 E-value: 3.79e-04
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PLN00113 | PLN00113 | leucine-rich repeat receptor-like protein kinase; Provisional |
590-693 | 4.91e-04 | |||||
leucine-rich repeat receptor-like protein kinase; Provisional Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 45.22 E-value: 4.91e-04
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PLN00113 | PLN00113 | leucine-rich repeat receptor-like protein kinase; Provisional |
568-711 | 5.81e-04 | |||||
leucine-rich repeat receptor-like protein kinase; Provisional Pssm-ID: 215061 [Multi-domain] Cd Length: 968 Bit Score: 44.84 E-value: 5.81e-04
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ABC_UvrA | cd03238 | ATP-binding cassette domain of the excision repair protein UvrA; Nucleotide excision repair in ... |
227-327 | 1.57e-03 | |||||
ATP-binding cassette domain of the excision repair protein UvrA; Nucleotide excision repair in eubacteria is a process that repairs DNA damage by the removal of a 12-13-mer oligonucleotide containing the lesion. Recognition and cleavage of the damaged DNA is a multistep ATP-dependent reaction that requires the UvrA, UvrB, and UvrC proteins. Both UvrA and UvrB are ATPases, with UvrA having two ATP binding sites, which have the characteristic signature of the family of ABC proteins, and UvrB having one ATP binding site that is structurally related to that of helicases. Pssm-ID: 213205 [Multi-domain] Cd Length: 176 Bit Score: 41.54 E-value: 1.57e-03
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COG3903 | COG3903 | Predicted ATPase [General function prediction only]; |
230-317 | 1.63e-03 | |||||
Predicted ATPase [General function prediction only]; Pssm-ID: 443109 [Multi-domain] Cd Length: 933 Bit Score: 43.47 E-value: 1.63e-03
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GvpP | COG4980 | Gas vesicle protein YhaH [General function prediction only]; |
37-95 | 2.49e-03 | |||||
Gas vesicle protein YhaH [General function prediction only]; Pssm-ID: 444004 [Multi-domain] Cd Length: 106 Bit Score: 39.18 E-value: 2.49e-03
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AAA_22 | pfam13401 | AAA domain; |
230-318 | 6.44e-03 | |||||
AAA domain; Pssm-ID: 379165 [Multi-domain] Cd Length: 129 Bit Score: 38.86 E-value: 6.44e-03
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Blast search parameters | ||||
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