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Conserved domains on  [gi|1958643676|ref|XP_038961103|]
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ralBP1-associated Eps domain-containing protein 1 isoform X5 [Rattus norvegicus]

Protein Classification

EH domain-containing protein( domain architecture ID 18088296)

EH (Eps15 homology) domain-containing protein contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+; similar to Homo sapiens RalBP1-associated Eps domain-containing protein 1, which may coordinate the cellular actions of activated EGF receptors and Ral-GTPases

CATH:  1.10.238.10
Gene Ontology:  GO:0005515|GO:0005509
PubMed:  11911876|9397678|7568168
SCOP:  4000946

Graphical summary

 Zoom to residue level

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List of domain hits

 Name Accession Description Interval E-value
EH smart00027
Eps15 homology domain; Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe ...
 289-380 1.01e-31

Eps15 homology domain; Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.


:

Pssm-ID: 197477 [Multi-domain]  Cd Length: 96  Bit Score: 118.92  E-value: 1.01e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958643676  289 PWKITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFHLVVARKNGY 368
Cdd:smart00027   1 PWAISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSGLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYRKLNGY 80

                           90
                   ....*....|..
gi 1958643676  369 DLPEKLPESLMP 380
Cdd:smart00027  81 PIPASLPPSLIP 92
EH super family cl42943
Eps15 homology domain; Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe ...
 6-85 7.53e-07

Eps15 homology domain; Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.


The actual alignment was detected with superfamily member smart00027:

Pssm-ID: 197477 [Multi-domain]  Cd Length: 96  Bit Score: 48.04  E-value: 7.53e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958643676    6 LSDAEQKYYSDLFSYCDIEsTKKVVVNGRVLELFRAAQLPNDVVLQIMELCGATRLGYFGRSQFYIALKLVAVAQSGFPL 85
Cdd:smart00027   4 ISPEDKAKYEQIFRSLDKN-QDGTVTGAQAKPILLKSGLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYRKLNGYPI 82
PRK07764 super family cl35613
DNA polymerase III subunits gamma and tau; Validated
 163-260 6.88e-04

DNA polymerase III subunits gamma and tau; Validated


The actual alignment was detected with superfamily member PRK07764:

Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 43.44  E-value: 6.88e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958643676 163 PPPPGRGQVKKAPGSHDAAQPRPSADQQEPASPVVSPQQSPPTSPHTWRKHNRHPsggnseRPLAGPGPFWSPFGDAQSG 242
Cdd:PRK07764  689 APAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPP------EPDDPPDPAGAPAQPPPPP 762

                          90
                  ....*....|....*...
gi 1958643676 243 SSAGDAVWSGHSPPPPQE 260
Cdd:PRK07764  763 APAPAAAPAAAPPPSPPS 780
 
Name Accession Description Interval E-value
EH smart00027
Eps15 homology domain; Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe ...
 289-380 1.01e-31

Eps15 homology domain; Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.


Pssm-ID: 197477 [Multi-domain]  Cd Length: 96  Bit Score: 118.92  E-value: 1.01e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958643676  289 PWKITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFHLVVARKNGY 368
Cdd:smart00027   1 PWAISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSGLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYRKLNGY 80

                           90
                   ....*....|..
gi 1958643676  369 DLPEKLPESLMP 380
Cdd:smart00027  81 PIPASLPPSLIP 92
EH cd00052
Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and ...
 300-366 3.69e-24

Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.


Pssm-ID: 238009 [Multi-domain]  Cd Length: 67  Bit Score: 96.13  E-value: 3.69e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958643676 300 YVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFHLVVARKN 366
Cdd:cd00052     1 YDQIFRSLDPDGDGLISGDEARPFLGKSGLPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLIALALN 67
EF-hand_4 pfam12763
Cytoskeletal-regulatory complex EF hand; This is an efhand family from the N-terminal of actin ...
 291-380 1.04e-10

Cytoskeletal-regulatory complex EF hand; This is an efhand family from the N-terminal of actin cytoskeleton-regulatory complex END3 and similar proteins from fungi and closely related species.


Pssm-ID: 289529  Cd Length: 104  Bit Score: 59.31  E-value: 1.04e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958643676 291 KITDEQRQYYVNQFKTIQPDlNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFHLVVARKNGY-- 368
Cdd:pfam12763   3 RLEEWEIKKYWEIFSGLKPE-NNKLTGDQVSPVLKNSRLPDDQLAKIWDLADIDSDGKLDFEEFCIAMRLIFDLVNGNia 81

                          90
                  ....*....|..
gi 1958643676 369 DLPEKLPESLMP 380
Cdd:pfam12763  82 DVPDELPDWLVP 93
EH smart00027
Eps15 homology domain; Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe ...
 6-85 7.53e-07

Eps15 homology domain; Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.


Pssm-ID: 197477 [Multi-domain]  Cd Length: 96  Bit Score: 48.04  E-value: 7.53e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958643676    6 LSDAEQKYYSDLFSYCDIEsTKKVVVNGRVLELFRAAQLPNDVVLQIMELCGATRLGYFGRSQFYIALKLVAVAQSGFPL 85
Cdd:smart00027   4 ISPEDKAKYEQIFRSLDKN-QDGTVTGAQAKPILLKSGLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYRKLNGYPI 82
EH cd00052
Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and ...
 14-81 1.35e-04

Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.


Pssm-ID: 238009 [Multi-domain]  Cd Length: 67  Bit Score: 40.67  E-value: 1.35e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958643676  14 YSDLFSycDIESTKKVVVNG-RVLELFRAAQLPNDVVLQIMELCGATRLGYFGRSQFYIALKLVAVAQS 81
Cdd:cd00052     1 YDQIFR--SLDPDGDGLISGdEARPFLGKSGLPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLIALALN 67
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 163-260 6.88e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 43.44  E-value: 6.88e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958643676 163 PPPPGRGQVKKAPGSHDAAQPRPSADQQEPASPVVSPQQSPPTSPHTWRKHNRHPsggnseRPLAGPGPFWSPFGDAQSG 242
Cdd:PRK07764  689 APAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPP------EPDDPPDPAGAPAQPPPPP 762

                          90
                  ....*....|....*...
gi 1958643676 243 SSAGDAVWSGHSPPPPQE 260
Cdd:PRK07764  763 APAPAAAPAAAPPPSPPS 780
Pro-rich pfam15240
Proline-rich protein; This family includes several eukaryotic proline-rich proteins.
 140-259 2.82e-03

Proline-rich protein; This family includes several eukaryotic proline-rich proteins.


Pssm-ID: 464580 [Multi-domain]  Cd Length: 167  Bit Score: 39.25  E-value: 2.82e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958643676 140 QESRHAASYS------SDAENQSAYAGVIP--PPPGRGQVKKAPGSHDAAQPRPSADQQEPASPVVSPQQSPP----TSP 207
Cdd:pfam15240  17 QSSSEDVSQEdspsliSEEEGQSQQGGQGPqgPPPGGFPPQPPASDDPPGPPPPGGPQQPPPQGGKQKPQGPPpqggPRP 96

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1958643676 208 HTWRKHNRHPSGGNSERplaGPGPFWSPFGDAQSGSSAGDAVWSGHSPPPPQ 259
Cdd:pfam15240  97 PPGKPQGPPPQGGNQQQ---GPPPPGKPQGPPPQGGGPPPQGGNQQGPPPPP 145
 
Name Accession Description Interval E-value
EH smart00027
Eps15 homology domain; Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe ...
 289-380 1.01e-31

Eps15 homology domain; Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.


Pssm-ID: 197477 [Multi-domain]  Cd Length: 96  Bit Score: 118.92  E-value: 1.01e-31
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958643676  289 PWKITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFHLVVARKNGY 368
Cdd:smart00027   1 PWAISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSGLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYRKLNGY 80

                           90
                   ....*....|..
gi 1958643676  369 DLPEKLPESLMP 380
Cdd:smart00027  81 PIPASLPPSLIP 92
EH cd00052
Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and ...
 300-366 3.69e-24

Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.


Pssm-ID: 238009 [Multi-domain]  Cd Length: 67  Bit Score: 96.13  E-value: 3.69e-24
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958643676 300 YVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFHLVVARKN 366
Cdd:cd00052     1 YDQIFRSLDPDGDGLISGDEARPFLGKSGLPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLIALALN 67
EF-hand_4 pfam12763
Cytoskeletal-regulatory complex EF hand; This is an efhand family from the N-terminal of actin ...
 291-380 1.04e-10

Cytoskeletal-regulatory complex EF hand; This is an efhand family from the N-terminal of actin cytoskeleton-regulatory complex END3 and similar proteins from fungi and closely related species.


Pssm-ID: 289529  Cd Length: 104  Bit Score: 59.31  E-value: 1.04e-10
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958643676 291 KITDEQRQYYVNQFKTIQPDlNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFHLVVARKNGY-- 368
Cdd:pfam12763   3 RLEEWEIKKYWEIFSGLKPE-NNKLTGDQVSPVLKNSRLPDDQLAKIWDLADIDSDGKLDFEEFCIAMRLIFDLVNGNia 81

                          90
                  ....*....|..
gi 1958643676 369 DLPEKLPESLMP 380
Cdd:pfam12763  82 DVPDELPDWLVP 93
EH smart00027
Eps15 homology domain; Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe ...
 6-85 7.53e-07

Eps15 homology domain; Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.


Pssm-ID: 197477 [Multi-domain]  Cd Length: 96  Bit Score: 48.04  E-value: 7.53e-07
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958643676    6 LSDAEQKYYSDLFSYCDIEsTKKVVVNGRVLELFRAAQLPNDVVLQIMELCGATRLGYFGRSQFYIALKLVAVAQSGFPL 85
Cdd:smart00027   4 ISPEDKAKYEQIFRSLDKN-QDGTVTGAQAKPILLKSGLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYRKLNGYPI 82
EH cd00052
Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and ...
 14-81 1.35e-04

Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.


Pssm-ID: 238009 [Multi-domain]  Cd Length: 67  Bit Score: 40.67  E-value: 1.35e-04
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958643676  14 YSDLFSycDIESTKKVVVNG-RVLELFRAAQLPNDVVLQIMELCGATRLGYFGRSQFYIALKLVAVAQS 81
Cdd:cd00052     1 YDQIFR--SLDPDGDGLISGdEARPFLGKSGLPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLIALALN 67
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 163-260 6.88e-04

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 43.44  E-value: 6.88e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958643676 163 PPPPGRGQVKKAPGSHDAAQPRPSADQQEPASPVVSPQQSPPTSPHTWRKHNRHPsggnseRPLAGPGPFWSPFGDAQSG 242
Cdd:PRK07764  689 APAAPAGAAPAQPAPAPAATPPAGQADDPAAQPPQAAQGASAPSPAADDPVPLPP------EPDDPPDPAGAPAQPPPPP 762

                          90
                  ....*....|....*...
gi 1958643676 243 SSAGDAVWSGHSPPPPQE 260
Cdd:PRK07764  763 APAPAAAPAAAPPPSPPS 780
EF-hand_7 pfam13499
EF-hand domain pair;
304-358 2.18e-03

EF-hand domain pair;


Pssm-ID: 463900 [Multi-domain]  Cd Length: 67  Bit Score: 37.23  E-value: 2.18e-03
                          10        20        30        40        50
                  ....*....|....*....|....*....|....*....|....*....|....*....
gi 1958643676 304 FKTIQPDLNGFIP----GSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAF 358
Cdd:pfam13499   8 FKLLDSDGDGYLDveelKKLLRKLEEGEPLSDEEVEELFKEFDLDKDGRISFEEFLELY 66
Pro-rich pfam15240
Proline-rich protein; This family includes several eukaryotic proline-rich proteins.
 140-259 2.82e-03

Proline-rich protein; This family includes several eukaryotic proline-rich proteins.


Pssm-ID: 464580 [Multi-domain]  Cd Length: 167  Bit Score: 39.25  E-value: 2.82e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958643676 140 QESRHAASYS------SDAENQSAYAGVIP--PPPGRGQVKKAPGSHDAAQPRPSADQQEPASPVVSPQQSPP----TSP 207
Cdd:pfam15240  17 QSSSEDVSQEdspsliSEEEGQSQQGGQGPqgPPPGGFPPQPPASDDPPGPPPPGGPQQPPPQGGKQKPQGPPpqggPRP 96

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|..
gi 1958643676 208 HTWRKHNRHPSGGNSERplaGPGPFWSPFGDAQSGSSAGDAVWSGHSPPPPQ 259
Cdd:pfam15240  97 PPGKPQGPPPQGGNQQQ---GPPPPGKPQGPPPQGGGPPPQGGNQQGPPPPP 145
PRK07764 PRK07764
DNA polymerase III subunits gamma and tau; Validated
 163-290 3.45e-03

DNA polymerase III subunits gamma and tau; Validated


Pssm-ID: 236090 [Multi-domain]  Cd Length: 824  Bit Score: 41.12  E-value: 3.45e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958643676 163 PPPPGRGQVKKAPGSH--DAAQPRPSADQQEPASPVVSPQQSPPTSPHTWrkHNRHPSGGNSERPLAGPGPFWSPFGDAQ 240
Cdd:PRK07764  591 APGAAGGEGPPAPASSgpPEEAARPAAPAAPAAPAAPAPAGAAAAPAEAS--AAPAPGVAAPEHHPKHVAVPDASDGGDG 668

                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1958643676 241 SGSSAGDAVWSGHSPPPPQENWDQTTVRTVASATTANEIRRQSSSYDDPW 290
Cdd:PRK07764  669 WPAKAGGAAPAAPPPAPAPAAPAAPAGAAPAQPAPAPAATPPAGQADDPA 718
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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