ectodysplasin-A isoform X5 [Rattus norvegicus]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| TNF super family | cl00147 | Tumor Necrosis Factor; TNF superfamily members include the cytokines: TNF (TNF-alpha), LT ... |
249-307 | 1.96e-03 | ||
Tumor Necrosis Factor; TNF superfamily members include the cytokines: TNF (TNF-alpha), LT (lymphotoxin-alpha, TNF-beta), CD40 ligand, Apo2L (TRAIL), Fas ligand, and osteoprotegerin (OPG) ligand. These proteins generally have an intracellular N-terminal domain, a short transmembrane segment, an extracellular stalk, and a globular TNF-like extracellular domain of about 150 residues. They initiate apoptosis by binding to related receptors, some of which have intracellular death domains. They generally form homo- or hetero- trimeric complexes.TNF cytokines bind one elongated receptor molecule along each of three clefts formed by neighboring monomers of the trimer with ligand trimerization a requiste for receptor binding. The actual alignment was detected with superfamily member cd00184: Pssm-ID: 444713 Cd Length: 137 Bit Score: 38.09 E-value: 1.96e-03
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| Name | Accession | Description | Interval | E-value | ||
| TNF | cd00184 | Tumor Necrosis Factor; TNF superfamily members include the cytokines: TNF (TNF-alpha), LT ... |
249-307 | 1.96e-03 | ||
Tumor Necrosis Factor; TNF superfamily members include the cytokines: TNF (TNF-alpha), LT (lymphotoxin-alpha, TNF-beta), CD40 ligand, Apo2L (TRAIL), Fas ligand, and osteoprotegerin (OPG) ligand. These proteins generally have an intracellular N-terminal domain, a short transmembrane segment, an extracellular stalk, and a globular TNF-like extracellular domain of about 150 residues. They initiate apoptosis by binding to related receptors, some of which have intracellular death domains. They generally form homo- or hetero- trimeric complexes.TNF cytokines bind one elongated receptor molecule along each of three clefts formed by neighboring monomers of the trimer with ligand trimerization a requiste for receptor binding. Pssm-ID: 238108 Cd Length: 137 Bit Score: 38.09 E-value: 1.96e-03
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| Name | Accession | Description | Interval | E-value | ||
| TNF | cd00184 | Tumor Necrosis Factor; TNF superfamily members include the cytokines: TNF (TNF-alpha), LT ... |
249-307 | 1.96e-03 | ||
Tumor Necrosis Factor; TNF superfamily members include the cytokines: TNF (TNF-alpha), LT (lymphotoxin-alpha, TNF-beta), CD40 ligand, Apo2L (TRAIL), Fas ligand, and osteoprotegerin (OPG) ligand. These proteins generally have an intracellular N-terminal domain, a short transmembrane segment, an extracellular stalk, and a globular TNF-like extracellular domain of about 150 residues. They initiate apoptosis by binding to related receptors, some of which have intracellular death domains. They generally form homo- or hetero- trimeric complexes.TNF cytokines bind one elongated receptor molecule along each of three clefts formed by neighboring monomers of the trimer with ligand trimerization a requiste for receptor binding. Pssm-ID: 238108 Cd Length: 137 Bit Score: 38.09 E-value: 1.96e-03
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| Blast search parameters | ||||
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