NCBI Home Page NCBI Site Search page NCBI Guide that lists and describes the NCBI resources
Conserved domains on  [gi|1958758211|ref|XP_038955055|]
View 

carbohydrate sulfotransferase 3 isoform X1 [Rattus norvegicus]

Protein Classification

sulfotransferase family protein( domain architecture ID 229543)

sulfotransferase family protein may utilize 3'-phospho-5'-adenylyl sulfate (PAPS) as sulfonate donor to catalyze the transfer of sulfate to its substrate(s)

Graphical summary

 Zoom to residue level

show extra options »

Show site features     Horizontal zoom: ×

List of domain hits

 Name Accession Description Interval E-value
Sulfotransfer_1 super family cl21551
Sulfotransferase domain;
269-453 1.13e-26

Sulfotransferase domain;


The actual alignment was detected with superfamily member pfam00685:

Pssm-ID: 473908 [Multi-domain]  Cd Length: 253  Bit Score: 108.20  E-value: 1.13e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958758211 269 KDHMALKVVRIRQLEFLQ------PLAEDP----RLDLRVIQLVRDPRAVLASRMVAFAGKYESwkKWLSEGQDQlsENE 338
Cdd:pfam00685  56 YFDVAEGPVRLNALPSPRiikthlPLHLLPkslwDPNAKIIYLVRNPKDVAVSYYHFFRMAKLL--KAPGTPFEF--VED 131

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958758211 339 VQRLRGNCENIRLSAELGLRQpaWLRGRYMLVRYEDVARRPLQKAREMYRFAGIPLTPQ-----VEDWIQKNTQAARDSS 413
Cdd:pfam00685 132 FLNGKVNCGSYFDHVKGWWKL--RPPGNILFLRYEDLKKDPRGEIKKIAEFLGIPLTEEeldkiVKHLSFENMKGNPCLN 209

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1958758211 414 DVYSTQKNSS----EQFEKWRFSIPFKLAQVVQAVCGPAMHLFG 453
Cdd:pfam00685 210 YSKLPKEVSPffrkGLVGDWKNYFTPEQAEKFDEIYQEKMKGTG 253
 
Name Accession Description Interval E-value
Sulfotransfer_1 pfam00685
Sulfotransferase domain;
269-453 1.13e-26

Sulfotransferase domain;


Pssm-ID: 425820 [Multi-domain]  Cd Length: 253  Bit Score: 108.20  E-value: 1.13e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958758211 269 KDHMALKVVRIRQLEFLQ------PLAEDP----RLDLRVIQLVRDPRAVLASRMVAFAGKYESwkKWLSEGQDQlsENE 338
Cdd:pfam00685  56 YFDVAEGPVRLNALPSPRiikthlPLHLLPkslwDPNAKIIYLVRNPKDVAVSYYHFFRMAKLL--KAPGTPFEF--VED 131

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958758211 339 VQRLRGNCENIRLSAELGLRQpaWLRGRYMLVRYEDVARRPLQKAREMYRFAGIPLTPQ-----VEDWIQKNTQAARDSS 413
Cdd:pfam00685 132 FLNGKVNCGSYFDHVKGWWKL--RPPGNILFLRYEDLKKDPRGEIKKIAEFLGIPLTEEeldkiVKHLSFENMKGNPCLN 209

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1958758211 414 DVYSTQKNSS----EQFEKWRFSIPFKLAQVVQAVCGPAMHLFG 453
Cdd:pfam00685 210 YSKLPKEVSPffrkGLVGDWKNYFTPEQAEKFDEIYQEKMKGTG 253
 
Name Accession Description Interval E-value
Sulfotransfer_1 pfam00685
Sulfotransferase domain;
269-453 1.13e-26

Sulfotransferase domain;


Pssm-ID: 425820 [Multi-domain]  Cd Length: 253  Bit Score: 108.20  E-value: 1.13e-26
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958758211 269 KDHMALKVVRIRQLEFLQ------PLAEDP----RLDLRVIQLVRDPRAVLASRMVAFAGKYESwkKWLSEGQDQlsENE 338
Cdd:pfam00685  56 YFDVAEGPVRLNALPSPRiikthlPLHLLPkslwDPNAKIIYLVRNPKDVAVSYYHFFRMAKLL--KAPGTPFEF--VED 131

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958758211 339 VQRLRGNCENIRLSAELGLRQpaWLRGRYMLVRYEDVARRPLQKAREMYRFAGIPLTPQ-----VEDWIQKNTQAARDSS 413
Cdd:pfam00685 132 FLNGKVNCGSYFDHVKGWWKL--RPPGNILFLRYEDLKKDPRGEIKKIAEFLGIPLTEEeldkiVKHLSFENMKGNPCLN 209

                         170       180       190       200
                  ....*....|....*....|....*....|....*....|....
gi 1958758211 414 DVYSTQKNSS----EQFEKWRFSIPFKLAQVVQAVCGPAMHLFG 453
Cdd:pfam00685 210 YSKLPKEVSPffrkGLVGDWKNYFTPEQAEKFDEIYQEKMKGTG 253
Sulfotransfer_3 pfam13469
Sulfotransferase family;
295-396 1.58e-08

Sulfotransferase family;


Pssm-ID: 463887  Cd Length: 173  Bit Score: 54.22  E-value: 1.58e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958758211 295 DLRVIQLVRDPRAVLASRMVAFAGKY-ESWKKWLSEGQDQLSE---NEVQRLRGNCENIrlsaelglrqpawLRGRYMLV 370
Cdd:pfam13469  81 DAKFIHLHRDPVDTVISSYCSLFGFTlSSYSTAFLRDIGLALArwsRAYERLMAARARV-------------PPGRFLDV 147

                          90       100
                  ....*....|....*....|....*.
gi 1958758211 371 RYEDVARRPLQKAREMYRFAGIPLTP 396
Cdd:pfam13469 148 RYEDLVADPEGTLRRILEFLGLPWDD 173
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
Help | Disclaimer | Write to the Help Desk
NCBI | NLM | NIH