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Conserved domains on  [gi|1958684541|ref|XP_038950516|]
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mitochondrial ornithine transporter 1 isoform X1 [Rattus norvegicus]

Protein Classification

solute carrier family 25 protein( domain architecture ID 10445172)

solute carrier 25 family (SLC25) protein which transfers molecules across the membranes of organelles, usually mitochondria

Gene Ontology:  GO:0016020|GO:1990542
TCDB:  2.A.29

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Mito_carr pfam00153
Mitochondrial carrier protein;
205-295 7.64e-23

Mitochondrial carrier protein;


:

Pssm-ID: 395101 [Multi-domain]  Cd Length: 96  Bit Score: 90.41  E-value: 7.64e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958684541 205 DELGPIPLMLSGGFGGICLWLAVYPVDCIKSRIQVLSMTG--KQTGLIRTFLSIVKNEGITALYSGLKPTMIRAFPANGA 282
Cdd:pfam00153   1 SELSFLASLLAGGIAGAIAVTVTYPLDVVKTRLQVQGGSGksKGRGILDCFKKIYKEEGIRGLYKGLLPNLLRVAPAAAI 80
                          90
                  ....*....|...
gi 1958684541 283 LFLAYEYSRKLMM 295
Cdd:pfam00153  81 YFGTYETLKRLLL 93
Mito_carr pfam00153
Mitochondrial carrier protein;
9-94 1.27e-15

Mitochondrial carrier protein;


:

Pssm-ID: 395101 [Multi-domain]  Cd Length: 96  Bit Score: 70.76  E-value: 1.27e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958684541   9 AAIDLTAGAAGGTACVLTGQPFDTMKVKMQTFPDLYRGLT----DCCLRTYSQVGFRGFYKGTSPALIANIAENSVLFMC 84
Cdd:pfam00153   5 FLASLLAGGIAGAIAVTVTYPLDVVKTRLQVQGGSGKSKGrgilDCFKKIYKEEGIRGLYKGLLPNLLRVAPAAAIYFGT 84
                          90
                  ....*....|
gi 1958684541  85 YGFCQQVVRK 94
Cdd:pfam00153  85 YETLKRLLLK 94
Mito_carr pfam00153
Mitochondrial carrier protein;
122-198 3.14e-15

Mitochondrial carrier protein;


:

Pssm-ID: 395101 [Multi-domain]  Cd Length: 96  Bit Score: 69.99  E-value: 3.14e-15
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958684541 122 LVLCPTELVKCRLQTMyemetSGKIAASQNTVWSVVKEIFRKDGPLGFYHGLSSTLLREVPGYFFFFGGYELSRSFF 198
Cdd:pfam00153  21 TVTYPLDVVKTRLQVQ-----GGSGKSKGRGILDCFKKIYKEEGIRGLYKGLLPNLLRVAPAAAIYFGTYETLKRLL 92
 
Name Accession Description Interval E-value
Mito_carr pfam00153
Mitochondrial carrier protein;
205-295 7.64e-23

Mitochondrial carrier protein;


Pssm-ID: 395101 [Multi-domain]  Cd Length: 96  Bit Score: 90.41  E-value: 7.64e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958684541 205 DELGPIPLMLSGGFGGICLWLAVYPVDCIKSRIQVLSMTG--KQTGLIRTFLSIVKNEGITALYSGLKPTMIRAFPANGA 282
Cdd:pfam00153   1 SELSFLASLLAGGIAGAIAVTVTYPLDVVKTRLQVQGGSGksKGRGILDCFKKIYKEEGIRGLYKGLLPNLLRVAPAAAI 80
                          90
                  ....*....|...
gi 1958684541 283 LFLAYEYSRKLMM 295
Cdd:pfam00153  81 YFGTYETLKRLLL 93
Mito_carr pfam00153
Mitochondrial carrier protein;
9-94 1.27e-15

Mitochondrial carrier protein;


Pssm-ID: 395101 [Multi-domain]  Cd Length: 96  Bit Score: 70.76  E-value: 1.27e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958684541   9 AAIDLTAGAAGGTACVLTGQPFDTMKVKMQTFPDLYRGLT----DCCLRTYSQVGFRGFYKGTSPALIANIAENSVLFMC 84
Cdd:pfam00153   5 FLASLLAGGIAGAIAVTVTYPLDVVKTRLQVQGGSGKSKGrgilDCFKKIYKEEGIRGLYKGLLPNLLRVAPAAAIYFGT 84
                          90
                  ....*....|
gi 1958684541  85 YGFCQQVVRK 94
Cdd:pfam00153  85 YETLKRLLLK 94
Mito_carr pfam00153
Mitochondrial carrier protein;
122-198 3.14e-15

Mitochondrial carrier protein;


Pssm-ID: 395101 [Multi-domain]  Cd Length: 96  Bit Score: 69.99  E-value: 3.14e-15
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958684541 122 LVLCPTELVKCRLQTMyemetSGKIAASQNTVWSVVKEIFRKDGPLGFYHGLSSTLLREVPGYFFFFGGYELSRSFF 198
Cdd:pfam00153  21 TVTYPLDVVKTRLQVQ-----GGSGKSKGRGILDCFKKIYKEEGIRGLYKGLLPNLLRVAPAAAIYFGTYETLKRLL 92
PTZ00168 PTZ00168
mitochondrial carrier protein; Provisional
213-294 4.36e-04

mitochondrial carrier protein; Provisional


Pssm-ID: 185494 [Multi-domain]  Cd Length: 259  Bit Score: 41.06  E-value: 4.36e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958684541 213 MLSGGFGGICLWLAVYPVDCIKSRIQVlsmtgkqtgliRTFLSIvknEGITALYSGLKPTMIRAFPANGALFLAYEYSRK 292
Cdd:PTZ00168    7 LVTGALSGVIVDAVLYPIDSIKTNIQA-----------KKSFSF---SDIKKLYSGILPTLVGTVPASAFFYCFYELSKK 72

                  ..
gi 1958684541 293 LM 294
Cdd:PTZ00168   73 LL 74
 
Name Accession Description Interval E-value
Mito_carr pfam00153
Mitochondrial carrier protein;
205-295 7.64e-23

Mitochondrial carrier protein;


Pssm-ID: 395101 [Multi-domain]  Cd Length: 96  Bit Score: 90.41  E-value: 7.64e-23
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958684541 205 DELGPIPLMLSGGFGGICLWLAVYPVDCIKSRIQVLSMTG--KQTGLIRTFLSIVKNEGITALYSGLKPTMIRAFPANGA 282
Cdd:pfam00153   1 SELSFLASLLAGGIAGAIAVTVTYPLDVVKTRLQVQGGSGksKGRGILDCFKKIYKEEGIRGLYKGLLPNLLRVAPAAAI 80
                          90
                  ....*....|...
gi 1958684541 283 LFLAYEYSRKLMM 295
Cdd:pfam00153  81 YFGTYETLKRLLL 93
Mito_carr pfam00153
Mitochondrial carrier protein;
9-94 1.27e-15

Mitochondrial carrier protein;


Pssm-ID: 395101 [Multi-domain]  Cd Length: 96  Bit Score: 70.76  E-value: 1.27e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958684541   9 AAIDLTAGAAGGTACVLTGQPFDTMKVKMQTFPDLYRGLT----DCCLRTYSQVGFRGFYKGTSPALIANIAENSVLFMC 84
Cdd:pfam00153   5 FLASLLAGGIAGAIAVTVTYPLDVVKTRLQVQGGSGKSKGrgilDCFKKIYKEEGIRGLYKGLLPNLLRVAPAAAIYFGT 84
                          90
                  ....*....|
gi 1958684541  85 YGFCQQVVRK 94
Cdd:pfam00153  85 YETLKRLLLK 94
Mito_carr pfam00153
Mitochondrial carrier protein;
122-198 3.14e-15

Mitochondrial carrier protein;


Pssm-ID: 395101 [Multi-domain]  Cd Length: 96  Bit Score: 69.99  E-value: 3.14e-15
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958684541 122 LVLCPTELVKCRLQTMyemetSGKIAASQNTVWSVVKEIFRKDGPLGFYHGLSSTLLREVPGYFFFFGGYELSRSFF 198
Cdd:pfam00153  21 TVTYPLDVVKTRLQVQ-----GGSGKSKGRGILDCFKKIYKEEGIRGLYKGLLPNLLRVAPAAAIYFGTYETLKRLL 92
PTZ00168 PTZ00168
mitochondrial carrier protein; Provisional
213-294 4.36e-04

mitochondrial carrier protein; Provisional


Pssm-ID: 185494 [Multi-domain]  Cd Length: 259  Bit Score: 41.06  E-value: 4.36e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958684541 213 MLSGGFGGICLWLAVYPVDCIKSRIQVlsmtgkqtgliRTFLSIvknEGITALYSGLKPTMIRAFPANGALFLAYEYSRK 292
Cdd:PTZ00168    7 LVTGALSGVIVDAVLYPIDSIKTNIQA-----------KKSFSF---SDIKKLYSGILPTLVGTVPASAFFYCFYELSKK 72

                  ..
gi 1958684541 293 LM 294
Cdd:PTZ00168   73 LL 74
PTZ00169 PTZ00169
ADP/ATP transporter on adenylate translocase; Provisional
123-294 5.52e-04

ADP/ATP transporter on adenylate translocase; Provisional


Pssm-ID: 240302 [Multi-domain]  Cd Length: 300  Bit Score: 40.91  E-value: 5.52e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958684541 123 VLCPTELVKCRLQTMyemETSGKIAASQNTVWSVVKEIFRK----DGPLGFYHGLSSTLLREVPGYFFFFGGYELSRSFF 198
Cdd:PTZ00169   24 AVAPIERVKMLIQTQ---DSIPEIKSGKVPRYSGIVNCFRRvskeQGVLSLWRGNTANVIRYFPTQAFNFAFKDYFKNMF 100
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958684541 199 ASGRSKDELGPI--PLMLSGGFGGICLWLAVYPVDCIKSRIQVLSMTGKQ---TGLIRTFLSIVKNEGITALYSGLKPTM 273
Cdd:PTZ00169  101 PKYNQKTDFWKFfgVNILSGGLAGASSLLIVYPLDFARTRLASDIGKGGDrefTGLFDCLMKISKQTGFLSLYQGFGVSV 180
                         170       180
                  ....*....|....*....|.
gi 1958684541 274 IRAFPANGALFLAYEYSRKLM 294
Cdd:PTZ00169  181 QGIIVYRGAYFGLYDSAKALL 201
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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