|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
460-1248 |
5.45e-16 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 83.95 E-value: 5.45e-16
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 460 LVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQ---QDLQSKFVAKENEVQSLHS 536
Cdd:TIGR02168 230 LVLRLEELREELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQkelYALANEISRLEQQKQILRE 309
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 537 KLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDK 616
Cdd:TIGR02168 310 RLANLERQLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKVA 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 617 QLKQTEDSLASEQDHLASKEQELKDvqnvnfllkaEVQKLQALAKEQAAAAHEVEKmqKSVHVKDDKIRLLEEQLQREVA 696
Cdd:TIGR02168 390 QLELQIASLNNEIERLEARLERLED----------RRERLQQEIEELLKKLEEAEL--KELQAELEELEEELEELQEELE 457
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 697 SRVEELKILNDQNKALQLEVQKLQAVVSE-QPNKDVVEQMKKCIQEKDEKLRTVEELLETG---------LIQV------ 760
Cdd:TIGR02168 458 RLEEALEELREELEEAEQALDAAERELAQlQARLDSLERLQENLEGFSEGVKALLKNQSGLsgilgvlseLISVdegyea 537
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 761 ---ATREEELNAIRTENSSLTKE-VQELKAKQMDQVAYVLVPFVsliedlkkviheKDGQIKSVEELLevellkVANKEK 836
Cdd:TIGR02168 538 aieAALGGRLQAVVVENLNAAKKaIAFLKQNELGRVTFLPLDSI------------KGTEIQGNDREI------LKNIEG 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 837 TVQALKQEIEILKEEIGNAQLEKAHQLSVTS--QVQELQNLLRGKEEQVDsmkaaledLTGREKCTQVCSTPRFEELENV 914
Cdd:TIGR02168 600 FLGVAKDLVKFDPKLRKALSYLLGGVLVVDDldNALELAKKLRPGYRIVT--------LDGDLVRPGGVITGGSAKTNSS 671
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 915 LKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQEELQTVISEKEKE-ITDLCNE 993
Cdd:TIGR02168 672 ILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEqLEERIAQ 751
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 994 LESLKNAVEHQRKKNNDLREKNWEAMEALASTEKILQDRVNKTSKERQQQVEAVELESKDL--LKRLFPAVsvpshsnys 1071
Cdd:TIGR02168 752 LSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELtlLNEEAANL--------- 822
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1072 ewlrsfekkakacmagpsdTEAVKVLEHRLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKWKVKAEESR 1151
Cdd:TIGR02168 823 -------------------RERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERA 883
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1152 RTIQQMQSSFTASEQELERLRHENKAMENLRREREHLEIELEKAEVERSTYVMEVRELKTQLNETHS-KLQNEQTERKKV 1230
Cdd:TIGR02168 884 SLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSlTLEEAEALENKI 963
|
810
....*....|....*...
gi 1958681425 1231 ADDLHKAQQSLNFIHSKI 1248
Cdd:TIGR02168 964 EDDEEEARRRLKRLENKI 981
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
400-1189 |
7.30e-15 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 80.10 E-value: 7.30e-15
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 400 YQETQQMQMKFEQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNklrqdcgrLVSELNEKTGKLQQEGVQKK 479
Cdd:TIGR02168 241 LEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKELYA--------LANEISRLEQQKQILRERLA 312
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 480 NAEQAAAQLKVQLQEAERRWEEVQsyirKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESE 559
Cdd:TIGR02168 313 NLERQLEELEAQLEELESKLDELA----EELAELEEKLEELKEELESLEAELEELEAELEELESRLEELEEQLETLRSKV 388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 560 QKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAE--ELHKVIAEKDKQLKQTEDSLASEQDHLASKEQ 637
Cdd:TIGR02168 389 AQLELQIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAElkELQAELEELEEELEELQEELERLEEALEELRE 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 638 ELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVhvkddKIRLLEEQLQREVASRVEELkILNDQNKALQLEV- 716
Cdd:TIGR02168 469 ELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGV-----KALLKNQSGLSGILGVLSEL-ISVDEGYEAAIEAa 542
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 717 --QKLQAVVSEqpNKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKQMDQVAY 794
Cdd:TIGR02168 543 lgGRLQAVVVE--NLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRKALSY 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 795 VLVPFV------SLIEDLKKVIHE-----KDGQIKSVEELLEVELLKVANKektVQALKQEIEILKEEIgNAQLEKAHQL 863
Cdd:TIGR02168 621 LLGGVLvvddldNALELAKKLRPGyrivtLDGDLVRPGGVITGGSAKTNSS---ILERRREIEELEEKI-EELEEKIAEL 696
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 864 SVtsQVQELQNLLRGKEEQVDSMKAALEDLTGREKCTQVCSTPRFEELENVLKEKDN---EIKRIEAILKDTKSDLSKKA 940
Cdd:TIGR02168 697 EK--ALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQlskELTELEAEIEELEERLEEAE 774
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 941 ELLKEVQDENKLFKSQVEQLNHQNHQQASfpSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNDLR-------- 1012
Cdd:TIGR02168 775 EELAEAEAEIEELEAQIEQLKEELKALRE--ALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEeqieelse 852
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1013 --EKNWEAMEALASTEKILQDRVNKTSKERQQQVEAVELESKDLlkrlfpavsvpshSNYSEWLRSFEKKAKAcmagpsd 1090
Cdd:TIGR02168 853 diESLAAEIEELEELIEELESELEALLNERASLEEALALLRSEL-------------EELSEELRELESKRSE------- 912
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1091 teavkvLEHRLKEANEMHTLLQLECEKYKSVLAE-----------TEGILQKLQRSVEQEESKWKVKAEESRRTIQQMQS 1159
Cdd:TIGR02168 913 ------LRRELEELREKLAQLELRLEGLEVRIDNlqerlseeyslTLEEAEALENKIEDDEEEARRRLKRLENKIKELGP 986
|
810 820 830
....*....|....*....|....*....|....
gi 1958681425 1160 SFTASEQEL----ERLRHENKAMENLRREREHLE 1189
Cdd:TIGR02168 987 VNLAAIEEYeelkERYDFLTAQKEDLTEAKETLE 1020
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
448-1060 |
1.20e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 76.13 E-value: 1.20e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 448 AELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAK 527
Cdd:COG1196 232 LKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERR 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 528 ENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEEL 607
Cdd:COG1196 312 RELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEA 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 608 HKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQN----VNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDK 683
Cdd:COG1196 392 LRAAAELAAQLEELEEAEEALLERLERLEEELEELEEalaeLEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 684 IRLLEEQLQREVASRVEELKILNDQNKALQLEVQKLQAV--VSEQPNKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVA 761
Cdd:COG1196 472 AALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVkaALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNI 551
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 762 TREEELNAIRTENSSLTK-----------EVQELKAKQMDQVAYVLVPFVSLIEDLKKVIHEKDGQIKSVEELLEVELLK 830
Cdd:COG1196 552 VVEDDEVAAAAIEYLKAAkagratflpldKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVAAR 631
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 831 VANKEKTVQALKQEIEILKEEIgnAQLEKAHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKctqvcstprfEE 910
Cdd:COG1196 632 LEAALRRAVTLAGRLREVTLEG--EGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEE----------AL 699
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 911 LENVLKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQEELQTVISEKEKEITDL 990
Cdd:COG1196 700 LAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958681425 991 --CN-----ELESLKNAVEHQRKKNNDLReknweamEALASTEKILqDRVNKTSKER-QQQVEAVELESKDLLKRLFP 1060
Cdd:COG1196 780 gpVNllaieEYEELEERYDFLSEQREDLE-------EARETLEEAI-EEIDRETRERfLETFDAVNENFQELFPRLFG 849
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
606-1227 |
6.53e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 63.93 E-value: 6.53e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 606 ELHKVIAEKDKQLKQTED---SLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDD 682
Cdd:PRK03918 173 EIKRRIERLEKFIKRTENieeLIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEG 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 683 KIRLLEEQLqREVASRVEELKilndqnkalqLEVQKLQAVVSEQPNkdvveqmkkcIQEKDEKLRTVEELLETGLIQVAT 762
Cdd:PRK03918 253 SKRKLEEKI-RELEERIEELK----------KEIEELEEKVKELKE----------LKEKAEEYIKLSEFYEEYLDELRE 311
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 763 REEELNAIRTENSSLTKEVQELKAKQMDqvayvlvpfVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALK 842
Cdd:PRK03918 312 IEKRLSRLEEEINGIEERIKELEEKEER---------LEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLT 382
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 843 -QEIEILKEEIGNAQLEKahqLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKCTQVCSTPRFEE-LENVLKEKDN 920
Cdd:PRK03918 383 gLTPEKLEKELEELEKAK---EEIEEEISKITARIGELKKEIKELKKAIEELKKAKGKCPVCGRELTEEhRKELLEEYTA 459
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 921 EIKRIEAILKDTKSDLSK----KAELLKEVQDENKLFK--SQVEQLNHQNHQQASFpSQEELQTVISEKEKeITDLCNEL 994
Cdd:PRK03918 460 ELKRIEKELKEIEEKERKlrkeLRELEKVLKKESELIKlkELAEQLKELEEKLKKY-NLEELEKKAEEYEK-LKEKLIKL 537
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 995 ESLKNAVEHQRKKNNDLREKNWEAMEALASTEKILQDRVNKTSKERQQQVEAVELEskdlLKRLFPAvsvpshsnYSEWL 1074
Cdd:PRK03918 538 KGEIKSLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFESVEELEER----LKELEPF--------YNEYL 605
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1075 RsfekkakacmagpsdteaVKVLEHRLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKWKVKAEESRRti 1154
Cdd:PRK03918 606 E------------------LKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEELR-- 665
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958681425 1155 qqmqSSFTASEQELERLRHENKAMENLRREREHLEIELEKAEVERSTYVMEVRELK------TQLNETHSKLQNEQTER 1227
Cdd:PRK03918 666 ----EEYLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELEKLEkalervEELREKVKKYKALLKER 740
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
310-966 |
2.34e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 62.00 E-value: 2.34e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 310 LKEKSGVIKEALKKSNKgELSGLLHQLQEKERLLTATKEDAAATKERCKQLTQEMMTEKER---SSVVMARMKERIGTLE 386
Cdd:TIGR02168 300 LEQQKQILRERLANLER-QLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAEleeLEAELEELESRLEELE 378
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 387 KEHNIFQNKMHVSYQETQQMQMKfeqvREQMEAEIAHLKQENGILRdavSNTTNQLESKQSAELNKLRQDCGRLVSELNE 466
Cdd:TIGR02168 379 EQLETLRSKVAQLELQIASLNNE----IERLEARLERLEDRRERLQ---QEIEELLKKLEEAELKELQAELEELEEELEE 451
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 467 KTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSyirkRTAEHEAAQQDLQSKFVAKENEVQSLhSKLTDTLvskq 546
Cdd:TIGR02168 452 LQEELERLEEALEELREELEEAEQALDAAERELAQLQA----RLDSLERLQENLEGFSEGVKALLKNQ-SGLSGIL---- 522
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 547 qleQRLMQLMESEQK-RASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSA-SVLAEELHKVIAEKDKQLKQTEDS 624
Cdd:TIGR02168 523 ---GVLSELISVDEGyEAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTfLPLDSIKGTEIQGNDREILKNIEG 599
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 625 LASEQDHLASKEQELKDVqnVNFLL-----------KAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQR 693
Cdd:TIGR02168 600 FLGVAKDLVKFDPKLRKA--LSYLLggvlvvddldnALELAKKLRPGYRIVTLDGDLVRPGGVITGGSAKTNSSILERRR 677
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 694 EVASRVEELKILNDQNKALQLEVQKLQAVVSEQpnKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTE 773
Cdd:TIGR02168 678 EIEELEEKIEELEEKIAELEKALAELRKELEEL--EEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKE 755
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 774 NSSLTKEVQELKAKqmdqvayvlvpfvslIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIG 853
Cdd:TIGR02168 756 LTELEAEIEELEER---------------LEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAA 820
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 854 NAQLEKAHQL----SVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREkctqvcstprfEELENVLKEKDNEIKRIEAIL 929
Cdd:TIGR02168 821 NLRERLESLErriaATERRLEDLEEQIEELSEDIESLAAEIEELEELI-----------EELESELEALLNERASLEEAL 889
|
650 660 670
....*....|....*....|....*....|....*..
gi 1958681425 930 KDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQ 966
Cdd:TIGR02168 890 ALLRSELEELSEELRELESKRSELRRELEELREKLAQ 926
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
575-1239 |
5.52e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 60.93 E-value: 5.52e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 575 DILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDK--QLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAE 652
Cdd:PTZ00121 1082 DAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKaeDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAE 1161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 653 VQKlQALAKEQAAAAHEVEKMQKSVHV-KDDKIRLLEEQLQREVASRVEELKILNDQNKALqlEVQKLQAVVSEQPNKDV 731
Cdd:PTZ00121 1162 DAR-KAEEARKAEDAKKAEAARKAEEVrKAEELRKAEDARKAEAARKAEEERKAEEARKAE--DAKKAEAVKKAEEAKKD 1238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 732 VEQMKKCiqekdEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKQMDQVAYVlVPFVSLIEDLKKVIH 811
Cdd:PTZ00121 1239 AEEAKKA-----EEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKK-AEEKKKADEAKKKAE 1312
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 812 EK------DGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQLEKAHQLSVTSQVQELQNLLRGKEEQV-- 883
Cdd:PTZ00121 1313 EAkkadeaKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKkk 1392
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 884 --DSMKAALEDltgREKCTQVCSTPRFEELENVLKEKDNEIKRIEAILKdtKSDLSKKAELLKEVQDENKlfksQVEQLN 961
Cdd:PTZ00121 1393 adEAKKKAEED---KKKADELKKAAAAKKKADEAKKKAEEKKKADEAKK--KAEEAKKADEAKKKAEEAK----KAEEAK 1463
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 962 HQNHQQASfpsQEELQTVISEKEKEitdlcnelESLKNAVEHQRKKNNDLREKNWE---AMEALASTEKILQDRVNKTSK 1038
Cdd:PTZ00121 1464 KKAEEAKK---ADEAKKKAEEAKKA--------DEAKKKAEEAKKKADEAKKAAEAkkkADEAKKAEEAKKADEAKKAEE 1532
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1039 ERQ--QQVEAVELESKDLLKRlfpavsvpshsnySEWLRSFEKKAKAcmagpsdTEAVKVLEHRLKEANEMHTLLQLECE 1116
Cdd:PTZ00121 1533 AKKadEAKKAEEKKKADELKK-------------AEELKKAEEKKKA-------EEAKKAEEDKNMALRKAEEAKKAEEA 1592
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1117 KYKSVLAETEGILQ-KLQRSVEQEESKWKV----KAEESRRTIQQMQSSFTASEQELERLRHEN------KAMENLRRER 1185
Cdd:PTZ00121 1593 RIEEVMKLYEEEKKmKAEEAKKAEEAKIKAeelkKAEEEKKKVEQLKKKEAEEKKKAEELKKAEeenkikAAEEAKKAEE 1672
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|....
gi 1958681425 1186 EHLEIELEKAEVERSTYVMEVRELKTQLNETHSKLQNEQTERKKVADDLHKAQQ 1239
Cdd:PTZ00121 1673 DKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEE 1726
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
688-1300 |
8.54e-09 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 60.07 E-value: 8.54e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 688 EEQLQREVASRVEELKILNDQNKALQLEVQKLQAVVSEQPNK-DVVEQMKKCIQEKDEKLRTVEELLETGLIQVATR--- 763
Cdd:TIGR02168 255 LEELTAELQELEEKLEELRLEVSELEEEIEELQKELYALANEiSRLEQQKQILRERLANLERQLEELEAQLEELESKlde 334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 764 -EEELNAIRTENSSLTKEVQELKAKqmdqvayvLVPFVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALK 842
Cdd:TIGR02168 335 lAEELAELEEKLEELKEELESLEAE--------LEELEAELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLE 406
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 843 QEIEILKEEIGNAQLEKAHQLS--VTSQVQELQnllrgkeEQVDSMKAALEDLTGrekctqvcstpRFEELENVLKEKDN 920
Cdd:TIGR02168 407 ARLERLEDRRERLQQEIEELLKklEEAELKELQ-------AELEELEEELEELQE-----------ELERLEEALEELRE 468
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 921 EIKRIEAILKDTKSDLSK---KAELLKEVQDEN-KLFKSQVEQLNHQNHQQASFPSQEELQTVISEKEKEITD------- 989
Cdd:TIGR02168 469 ELEEAEQALDAAERELAQlqaRLDSLERLQENLeGFSEGVKALLKNQSGLSGILGVLSELISVDEGYEAAIEAalggrlq 548
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 990 --LCNELESLKNAVEHQrkKNNDLREKNWEAMEALASTEKILQDRVNKTSKERQQQVeAVELESKD---------LLKRL 1058
Cdd:TIGR02168 549 avVVENLNAAKKAIAFL--KQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGV-AKDLVKFDpklrkalsyLLGGV 625
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1059 FPAVSVPSHSNYSEWLRSFEK---------KAKACMAGPSDTEAVKVLEHR--LKEANEMHTLLQLECEKYKSVLAETEG 1127
Cdd:TIGR02168 626 LVVDDLDNALELAKKLRPGYRivtldgdlvRPGGVITGGSAKTNSSILERRreIEELEEKIEELEEKIAELEKALAELRK 705
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1128 ILQKLQRSVEQEESKWKVKAEESRRTIQQMQSSFTASEQELERLRHENKAMENLRREREHLEIELEKAEVERStyvmEVR 1207
Cdd:TIGR02168 706 ELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEAEIEELEERLEEAEEELA----EAE 781
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1208 ELKTQLNETHSKLQNEQTERKKVADDLHKAQQSLNFIHSKISLKAAGDTVVIENNDISPEMGSPEKETMS---VSLTQTV 1284
Cdd:TIGR02168 782 AEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRERLESLERRIAATERRLEDLEEQIEELSediESLAAEI 861
|
650
....*....|....*.
gi 1958681425 1285 AHLQQLLQEVNQQLTK 1300
Cdd:TIGR02168 862 EELEELIEELESELEA 877
|
|
| Rib_recp_KP_reg |
pfam05104 |
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards ... |
29-146 |
1.62e-08 |
|
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards the C-terminus of the transmembrane domain. The function is unclear.
Pssm-ID: 461548 [Multi-domain] Cd Length: 140 Bit Score: 54.74 E-value: 1.62e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 29 MKETLYDDVLAKQKREQKLISTKADKKKAEKKKNKKK------EIQNGTLHESD----SEHVPQDFKLSDASPVEDEqfV 98
Cdd:pfam05104 1 MKETSYEEALAKQRRELKKTPTEKEKKKKEKKKEKKKkskkkeEKPNGKLPESEqadeSEEEPREFKTPDEAPSAAL--E 78
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1958681425 99 PAPLSVAETSSSVRERKKKEKKQKPSLEEHIIKESDASKIPGKKVEPV 146
Cdd:pfam05104 79 PEPVPTPVPAPVEPEPAPPSESPAPSPKEKKKKEKKSAKVEPAETPEA 126
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
418-1042 |
2.70e-08 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 58.49 E-value: 2.70e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 418 EAEIAHLKQENGILRDAVSNTTNQLeSKQSAELNKLRQDCGRLVSELNEKTGklqqegvQKKNAEQAAAQLKVQLQEAER 497
Cdd:TIGR04523 67 EEKINNSNNKIKILEQQIKDLNDKL-KKNKDKINKLNSDLSKINSEIKNDKE-------QKNKLEVELNKLEKQKKENKK 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 498 RWEEVQSYIRKRTAEHEaaqqDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQ----------RLMQLMESEQKRASQEE 567
Cdd:TIGR04523 139 NIDKFLTEIKKKEKELE----KLNNKYNDLKKQKEELENELNLLEKEKLNIQKnidkiknkllKLELLLSNLKKKIQKNK 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 568 SMQIQVQDILEQNEALKAQIQQFHSQIaaqtsasvlaEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNF 647
Cdd:TIGR04523 215 SLESQISELKKQNNQLKDNIEKKQQEI----------NEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIK 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 648 LLKAEVQKL---------QALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEE---QLQREVASRVEELKILNDQNKALQLE 715
Cdd:TIGR04523 285 ELEKQLNQLkseisdlnnQKEQDWNKELKSELKNQEKKLEEIQNQISQNNKiisQLNEQISQLKKELTNSESENSEKQRE 364
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 716 VQKLQAVVSE-----QPNKDVVEQMKKCIQEKDEKLRTVEElletgliQVATREEELNAIRTENSSLTKEVQELKAKQMD 790
Cdd:TIGR04523 365 LEEKQNEIEKlkkenQSYKQEIKNLESQINDLESKIQNQEK-------LNQQKDEQIKKLQQEKELLEKEIERLKETIIK 437
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 791 QVayvlvpfvSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQLEkahQLSVTSQVQ 870
Cdd:TIGR04523 438 NN--------SEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKE---LKKLNEEKK 506
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 871 ELQNLLRGKEEQVDSMKAaledltgrekctqvcstpRFEELENVLKEKDNEIKRIEAILKDTKSDLsKKAELLKEVQDEN 950
Cdd:TIGR04523 507 ELEEKVKDLTKKISSLKE------------------KIEKLESEKKEKESKISDLEDELNKDDFEL-KKENLEKEIDEKN 567
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 951 KlfksQVEQLNHQnhQQASFPSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNDLREKNweamEALASTEKILQ 1030
Cdd:TIGR04523 568 K----EIEELKQT--QKSLKKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKEN----EKLSSIIKNIK 637
|
650
....*....|..
gi 1958681425 1031 DRVNKTSKERQQ 1042
Cdd:TIGR04523 638 SKKNKLKQEVKQ 649
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
584-1031 |
3.82e-08 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 58.13 E-value: 3.82e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 584 KAQIQQFHSQIAAQT-SASVLAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKE 662
Cdd:TIGR00606 690 EAELQEFISDLQSKLrLAPDKLKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEE 769
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 663 QAAAAHEVEKMQKSVHVKDDKIRLLEeQLQREvasrveelkiLNDQNKALQLEVQKLQAVVSEQpnkdVVEQMKKCIQEK 742
Cdd:TIGR00606 770 QETLLGTIMPEEESAKVCLTDVTIME-RFQME----------LKDVERKIAQQAAKLQGSDLDR----TVQQVNQEKQEK 834
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 743 DEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQEL--KAKQMDQVAYVLVPFVSLIEDLKKVIHEKDGQI--- 817
Cdd:TIGR00606 835 QHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIgtNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDspl 914
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 818 -KSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQlekAHQLSVTSQVQE-LQNLLRGKEEQVDSMKAALEDLTG 895
Cdd:TIGR00606 915 eTFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKNIH---GYMKDIENKIQDgKDDYLKQKETELNTVNAQLEECEK 991
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 896 REKctqvcstpRFEELENVLKEKDNEIKRIEAILKDTKSdLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQEE 975
Cdd:TIGR00606 992 HQE--------KINEDMRLMRQDIDTQKIQERWLQDNLT-LRKRENELKEVEEELKQHLKEMGQMQVLQMKQEHQKLEEN 1062
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*..
gi 1958681425 976 LQTVISEKEKEITDLCNELESLKNAVEHQRKKN-NDLREKNWEAMEALASTEKILQD 1031
Cdd:TIGR00606 1063 IDLIKRNHVLALGRQKGYEKEIKHFKKELREPQfRDAEEKYREMMIVMRTTELVNKD 1119
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
328-893 |
1.20e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 56.48 E-value: 1.20e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 328 ELSGLLHQLQEKERLLTATKEDAAATKERCKQLTQEMMTEKERSsvvmARMKERIGTLEKEHnifqnkmhvsyQETQQMQ 407
Cdd:COG1196 268 ELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERR----RELEERLEELEEEL-----------AELEEEL 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 408 MKFEQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQdcgrlvselnektgkLQQEGVQKKNAEQAAAQ 487
Cdd:COG1196 333 EELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEE---------------LEELAEELLEALRAAAE 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 488 LKVQLQEAERRWEEvqsyIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEE 567
Cdd:COG1196 398 LAAQLEELEEAEEA----LLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAA 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 568 SMQIQVQDILEQNEALKAQIQQFHSQIA--AQTSASVLAEELHKVIAEKDKQLKQ-TEDSLASEQDHLASKEQELKDVQN 644
Cdd:COG1196 474 LLEAALAELLEELAEAAARLLLLLEAEAdyEGFLEGVKAALLLAGLRGLAGAVAVlIGVEAAYEAALEAALAAALQNIVV 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 645 VNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQREVASRVEELKIlndqnKALQLEVQKLQAVVS 724
Cdd:COG1196 554 EDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASDLREADA-----RYYVLGDTLLGRTLV 628
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 725 EQPNKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKQMDQvayvlvpfvsliE 804
Cdd:COG1196 629 AARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELEL------------E 696
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 805 DLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQLEKAHQLSVTSQVQELQnllrgkEEQVD 884
Cdd:COG1196 697 EALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEEL------ERELE 770
|
....*....
gi 1958681425 885 SMKAALEDL 893
Cdd:COG1196 771 RLEREIEAL 779
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
319-1039 |
1.28e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 56.69 E-value: 1.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 319 EALKKSNKGELSGLLHQLQEKERLLTATKEDAAATKERCKQLTQEMMTEKERSSVVMARMKERIGTLEKEHNIFQNKMHV 398
Cdd:PTZ00121 1191 EELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQA 1270
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 399 SYQETQQMQM----KFEQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDCGRLVSELNEKTGKLQQE 474
Cdd:PTZ00121 1271 AIKAEEARKAdelkKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKA 1350
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 475 GVQK-----KNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLE 549
Cdd:PTZ00121 1351 EAEAaadeaEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEK 1430
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 550 QRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQL----------K 619
Cdd:PTZ00121 1431 KKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKAdeakkaaeakK 1510
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 620 QTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKL--QALAKEQAAAAHEVEKMQKSVHVKDDKIRLLE--EQLQREV 695
Cdd:PTZ00121 1511 KADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKadELKKAEELKKAEEKKKAEEAKKAEEDKNMALRkaEEAKKAE 1590
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 696 ASRVEELKILNDQNKALQLEV--------QKLQAVVSEQPNKDVVEQMKKCIQE---KDEKLRTVEELLETGLIQVATRE 764
Cdd:PTZ00121 1591 EARIEEVMKLYEEEKKMKAEEakkaeeakIKAEELKKAEEEKKKVEQLKKKEAEekkKAEELKKAEEENKIKAAEEAKKA 1670
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 765 EElNAIRTENSSLTKEVQELKAKQMDQVAyvlvPFVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQE 844
Cdd:PTZ00121 1671 EE-DKKKAEEAKKAEEDEKKAAEALKKEA----EEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKK 1745
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 845 IEILKEEIGN----AQLEKAHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKctqvcstprFEELENVLkEKDN 920
Cdd:PTZ00121 1746 AEEAKKDEEEkkkiAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDI---------FDNFANII-EGGK 1815
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 921 EIKRIEAILKDTKSDLSKKAELLKEVQ-DENKLFKSQVEQLNHQNHQQASFPSQEELQTVISEKEKEITDLCNELESLKN 999
Cdd:PTZ00121 1816 EGNLVINDSKEMEDSAIKEVADSKNMQlEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEADEIEKIDK 1895
|
730 740 750 760
....*....|....*....|....*....|....*....|
gi 1958681425 1000 AVEHQRKKNNDLREKNWEAMEALASTEKILQDRVNKTSKE 1039
Cdd:PTZ00121 1896 DDIEREIPNNNMAGKNNDIIDDKLDKDEYIKRDAEETREE 1935
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
700-1057 |
1.75e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 55.84 E-value: 1.75e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 700 EELKILNDQNKALQLEVQKLQAVVSEQPNKdvVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTK 779
Cdd:TIGR02169 674 AELQRLRERLEGLKRELSSLQSELRRIENR--LDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQ 751
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 780 EVQELKAKqMDQVAYVLVPFVSLIEDLKKVI-----HEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEilKEEIGN 854
Cdd:TIGR02169 752 EIENVKSE-LKELEARIEELEEDLHKLEEALndleaRLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLN--RLTLEK 828
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 855 AQLEKAhqlsvtsqVQELQNLLRGKEEQVDSMKAALEDLTGRekctqvcstprFEELENVLKEKDNEIKRIEAILKDTKS 934
Cdd:TIGR02169 829 EYLEKE--------IQELQEQRIDLKEQIKSIEKEIENLNGK-----------KEELEEELEELEAALRDLESRLGDLKK 889
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 935 DLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQasfpsQEELQTViSEKEKEITDLCNELESLKNAVEHQRKKNNDLREK 1014
Cdd:TIGR02169 890 ERDELEAQLRELERKIEELEAQIEKKRKRLSEL-----KAKLEAL-EEELSEIEDPKGEDEEIPEEELSLEDVQAELQRV 963
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1958681425 1015 NwEAMEALASTE-KILQD--RVNKTSKERQQQVEAVELESKDLLKR 1057
Cdd:TIGR02169 964 E-EEIRALEPVNmLAIQEyeEVLKRLDELKEKRAKLEEERKAILER 1008
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
460-1226 |
6.82e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 53.92 E-value: 6.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 460 LVSELNEKTGKLQQEgvqKKNAEQAAAqLKVQLQEAErrweevQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLT 539
Cdd:TIGR02169 192 IIDEKRQQLERLRRE---REKAERYQA-LLKEKREYE------GYELLKEKEALERQKEAIERQLASLEEELEKLTEEIS 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 540 DTLVSKQQLEQRLMQLmESEQKRASQEESMQIQvqdilEQNEALKAQIQQFHSQIAA-QTSASVLAEELHKVIAEKDKQL 618
Cdd:TIGR02169 262 ELEKRLEEIEQLLEEL-NKKIKDLGEEEQLRVK-----EKIGELEAEIASLERSIAEkERELEDAEERLAKLEAEIDKLL 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 619 KQTEDSlaseqdhlaskEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQREVASR 698
Cdd:TIGR02169 336 AEIEEL-----------EREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINEL 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 699 VEELKILNDQNKALQLEV----QKLQAVVSEQPN-KDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTE 773
Cdd:TIGR02169 405 KRELDRLQEELQRLSEELadlnAAIAGIEAKINElEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKE 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 774 NSSLTKEVQELKAKQMDQVAYVL--VPFVSLIEDLKKVIHEKDGQ-IKSVEELLEVELLKVANKEKTV-----QALKQEI 845
Cdd:TIGR02169 485 LSKLQRELAEAEAQARASEERVRggRAVEEVLKASIQGVHGTVAQlGSVGERYATAIEVAAGNRLNNVvveddAVAKEAI 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 846 EILKEE-IGNAQ---LEKAHQLSVTSQ-------VQELQNLLRGKEEQVDSMKAALEDL-------TGREKCTQVcstpR 907
Cdd:TIGR02169 565 ELLKRRkAGRATflpLNKMRDERRDLSilsedgvIGFAVDLVEFDPKYEPAFKYVFGDTlvvedieAARRLMGKY----R 640
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 908 FEELENVLKEKDNEI----KRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQnhQQASFpsqeELQTVISEK 983
Cdd:TIGR02169 641 MVTLEGELFEKSGAMtggsRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRI--ENRLD----ELSQELSDA 714
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 984 EKEITDLCNELESLKNAVEHQRKKNNDLREKNWEAMEALASTEKILQDrVNKTSKERQQQVEAVELESKDLLKRLfpavs 1063
Cdd:TIGR02169 715 SRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKE-LEARIEELEEDLHKLEEALNDLEARL----- 788
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1064 vpshsnysewlrsfekkakacmagpsdteavkvLEHRLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESK- 1142
Cdd:TIGR02169 789 ---------------------------------SHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEi 835
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1143 ---------WKVKAEESRRTIQQMQSSFTASEQELERLRHENKAME----NLRREREHLEIELEKAEVERSTYVMEVREL 1209
Cdd:TIGR02169 836 qelqeqridLKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLEsrlgDLKKERDELEAQLRELERKIEELEAQIEKK 915
|
810
....*....|....*..
gi 1958681425 1210 KTQLNETHSKLQNEQTE 1226
Cdd:TIGR02169 916 RKRLSELKAKLEALEEE 932
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
482-1015 |
1.13e-06 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 53.14 E-value: 1.13e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 482 EQAAAQLKVQLQEAERRWEEVQSYIrKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLmeseQK 561
Cdd:PRK03918 161 ENAYKNLGEVIKEIKRRIERLEKFI-KRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKEL----EE 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 562 RASQEESMQIQVQDILEQNEALKAQIQQFHSQIaaqtsasvlaEELHKVIAEKDKQLKQTEDSLASEQDHLASKEqELKD 641
Cdd:PRK03918 236 LKEEIEELEKELESLEGSKRKLEEKIRELEERI----------EELKKEIEELEEKVKELKELKEKAEEYIKLSE-FYEE 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 642 VQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVhvkdDKIRLLEEQLQREVAsRVEELKILNDQNKALQLEVQKLQA 721
Cdd:PRK03918 305 YLDELREIEKRLSRLEEEINGIEERIKELEEKEERL----EELKKKLKELEKRLE-ELEERHELYEEAKAKKEELERLKK 379
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 722 VVSEQPNKDVVEQMKKCIQEKDEKLRTVEELletgliqvatrEEELNAIRTENSSLTKEVQELKAKQM-----------D 790
Cdd:PRK03918 380 RLTGLTPEKLEKELEELEKAKEEIEEEISKI-----------TARIGELKKEIKELKKAIEELKKAKGkcpvcgrelteE 448
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 791 QVAYVLVPFVSLIEDLKKVIHEKDgQIKSVEELLEVELLKVANKEKTVQALKQ---EIEILKEEIGNAQLEKAHQlsVTS 867
Cdd:PRK03918 449 HRKELLEEYTAELKRIEKELKEIE-EKERKLRKELRELEKVLKKESELIKLKElaeQLKELEEKLKKYNLEELEK--KAE 525
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 868 QVQELQNLLRGKEEQVDSMKAALEDLTGREKctqvcstpRFEELENVLKEKDNEIKRIEAILKdtKSDLSKKAELLKEVQ 947
Cdd:PRK03918 526 EYEKLKEKLIKLKGEIKSLKKELEKLEELKK--------KLAELEKKLDELEEELAELLKELE--ELGFESVEELEERLK 595
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958681425 948 DENKLFKSQVEQLNHQNHQQASFPSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNDLREKN 1015
Cdd:PRK03918 596 ELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAFEELAETEKRLEELRKELEELEKKYSEEEYEE 663
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
319-1053 |
1.97e-06 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 52.84 E-value: 1.97e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 319 EALKKSNKGELSGLLHQLQEKERLLTATKEDAAATKERCKQlTQEMMTEKERSSVVMARMKERIGTLEKEHNIFQNKMHV 398
Cdd:PTZ00121 1143 EEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARK-AEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAE 1221
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 399 SYQETQQMQMKFEQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAelnkLRQDCGRLVSELNEKTGKLQQEGVQK 478
Cdd:PTZ00121 1222 DAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAA----IKAEEARKADELKKAEEKKKADEAKK 1297
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 479 KNAEQAAAQLKVQLQEAeRRWEEVQSYIRKRTAEHEAAQQDLQSKfvAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMES 558
Cdd:PTZ00121 1298 AEEKKKADEAKKKAEEA-KKADEAKKKAEEAKKKADAAKKKAEEA--KKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKE 1374
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 559 EQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDK--QLKQTEDSlASEQDHLASKE 636
Cdd:PTZ00121 1375 EAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKadEAKKKAEE-AKKADEAKKKA 1453
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 637 QELKDVQNVNflLKAEVQKLQALAKEQAAAAHEVEKMQKSVhvKDDKIRLLEEQLQREVASRVEELKILNDQNKALqlEV 716
Cdd:PTZ00121 1454 EEAKKAEEAK--KKAEEAKKADEAKKKAEEAKKADEAKKKA--EEAKKKADEAKKAAEAKKKADEAKKAEEAKKAD--EA 1527
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 717 QKLQAVVSEQPNKDVVEQMKKCIQEKDEKLRTVEELLEtglIQVATREEELNAIRTENSSLTKEVQELKAKQMDQvayvl 796
Cdd:PTZ00121 1528 KKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKK---AEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMK----- 1599
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 797 vpfvsliedlkkvIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNaQLEKAHQLSVTSQVQELQNLL 876
Cdd:PTZ00121 1600 -------------LYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAE-EKKKAEELKKAEEENKIKAAE 1665
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 877 RGKEEQVDSMKAaledltgrekctqvcstprfeelENVLKEKDNEIKRIEAILKdtKSDLSKKAELLKEVQDENKLFKSQ 956
Cdd:PTZ00121 1666 EAKKAEEDKKKA-----------------------EEAKKAEEDEKKAAEALKK--EAEEAKKAEELKKKEAEEKKKAEE 1720
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 957 VEQLNHQNHQQASFPSQEElqtvisEKEKEITDLCNELESLKNAVEHQRKknndlrEKNWEAMEALASTEKILQDRVNKT 1036
Cdd:PTZ00121 1721 LKKAEEENKIKAEEAKKEA------EEDKKKAEEAKKDEEEKKKIAHLKK------EEEKKAEEIRKEKEAVIEEELDEE 1788
|
730
....*....|....*..
gi 1958681425 1037 SKERQQQVEAVELESKD 1053
Cdd:PTZ00121 1789 DEKRRMEVDKKIKDIFD 1805
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
393-1186 |
2.41e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 52.04 E-value: 2.41e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 393 QNKMHVSYQetqQMQMKFEQVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKlRQDCGRLVSELNEKTGKLQ 472
Cdd:pfam15921 255 QNKIELLLQ---QHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQ-NSMYMRQLSDLESTVSQLR 330
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 473 QEGVQ-KKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQ---------SKFVAKENE------------ 530
Cdd:pfam15921 331 SELREaKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQklladlhkrEKELSLEKEqnkrlwdrdtgn 410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 531 ---VQSLHSKLTDTLVSKQQLEQrLMQLMESEQKRASQEESMQIQ--------VQDILEQNEALKAQIQQFHSQIAAQT- 598
Cdd:pfam15921 411 sitIDHLRRELDDRNMEVQRLEA-LLKAMKSECQGQMERQMAAIQgkneslekVSSLTAQLESTKEMLRKVVEELTAKKm 489
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 599 ---SASVLAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQN-----VNFLLKAEVQKLQALAKEQAAA--AH 668
Cdd:pfam15921 490 tleSSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNegdhlRNVQTECEALKLQMAEKDKVIEilRQ 569
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 669 EVEKMQKSV--HVKDDKIRLLEE-QLQREVASR---VEELKILNDQNKAlqlEVQKLQAVVSeqpnkDVVEQMKKCIQEK 742
Cdd:pfam15921 570 QIENMTQLVgqHGRTAGAMQVEKaQLEKEINDRrleLQEFKILKDKKDA---KIRELEARVS-----DLELEKVKLVNAG 641
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 743 DEKLRTVEELLETG---LIQVATREEELNAIRTENSSLTKEVQElKAKQMD----QVAYVLVPFVSLIEDLKKVIHEKDG 815
Cdd:pfam15921 642 SERLRAVKDIKQERdqlLNEVKTSRNELNSLSEDYEVLKRNFRN-KSEEMEtttnKLKMQLKSAQSELEQTRNTLKSMEG 720
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 816 QIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQLEK------AHQLSVT-SQVQELQNLLRGKEEQVDSMKA 888
Cdd:pfam15921 721 SDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKhflkeeKNKLSQElSTVATEKNKMAGELEVLRSQER 800
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 889 ALEDLTGREKCTQVCSTPRFEELENVLKEKDNEIKRIEaiLKDTKSdlskkaelLKEVQ----DENKLFKSQVEQLNHQN 964
Cdd:pfam15921 801 RLKEKVANMEVALDKASLQFAECQDIIQRQEQESVRLK--LQHTLD--------VKELQgpgyTSNSSMKPRLLQPASFT 870
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 965 HQQASFPSQEELQTVISEKEKEITDLCNE-LESLKNAVEHQRKKNNDLREKNWEAMEALASTEKI--LQDRVNKTSKERQ 1041
Cdd:pfam15921 871 RTHSNVPSSQSTASFLSHHSRKTNALKEDpTRDLKQLLQELRSVINEEPTVQLSKAEDKGRAPSLgaLDDRVRDCIIESS 950
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1042 QQVEAVELESKDLLKRLFPAVSVPSHSNYSEWLRSFEKKAK----ACMAGPSDTEAVKVLEHRLKEANEMHTLLQLECEk 1117
Cdd:pfam15921 951 LRSDICHSSSNSLQTEGSKSSETCSREPVLLHAGELEDPSScftfPSTASPSVKNSASRSFHSSPKKSPVHSLLTSSAE- 1029
|
810 820 830 840 850 860
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958681425 1118 yKSVLAETEGILQKLQRSVEQEESKWKVKAEESRRTIQQMQSSFTASEQELERLRHENKAMENLRRERE 1186
Cdd:pfam15921 1030 -GSIGSSSQYRSAKTIHSPDSVKDSQSLPIETTGKTCRKLQNRLESLQTLVEDLQLKNQAMSSMIRNQE 1097
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
459-770 |
2.49e-06 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 51.99 E-value: 2.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 459 RLVS---ELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQsyirkrtAEHEAAQQDLQSKfvakENEVQSLH 535
Cdd:TIGR02169 640 RMVTlegELFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLK-------RELSSLQSELRRI----ENRLDELS 708
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 536 SKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTS---------ASVLAEE 606
Cdd:TIGR02169 709 QELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEELEEdlhkleealNDLEARL 788
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 607 LHKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQksvhvkdDKIRL 686
Cdd:TIGR02169 789 SHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEI-------ENLNG 861
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 687 LEEQLQREVASRVEELKILNDQNKALQLEVQKLQAVVSEQPNKdvVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEE 766
Cdd:TIGR02169 862 KKEELEEELEELEAALRDLESRLGDLKKERDELEAQLRELERK--IEELEAQIEKKRKRLSELKAKLEALEEELSEIEDP 939
|
....
gi 1958681425 767 LNAI 770
Cdd:TIGR02169 940 KGED 943
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
351-783 |
3.20e-06 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 51.98 E-value: 3.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 351 AATKERCKQLTQEMmteKERSSVVMARMKERIGTLEKEHNiFQNKMHVSYQETQQMQmkfeQVREQMEAEIAHLKQENGI 430
Cdd:PRK10929 19 AATAPDEKQITQEL---EQAKAAKTPAQAEIVEALQSALN-WLEERKGSLERAKQYQ----QVIDNFPKLSAELRQQLNN 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 431 LRDAVSNttnqLESKQSAelNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRT 510
Cdd:PRK10929 91 ERDEPRS----VPPNMST--DALEQEILQVSSQLLEKSRQAQQEQDRAREISDSLSQLPQQQTEARRQLNEIERRLQTLG 164
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 511 AEHEAAQQdlqSKFVAKENEVQSLHSKLtdtlvskQQLEqrLMQLmeSEQKRasQEES-MQIQVQDilEQNEALKAQIQQ 589
Cdd:PRK10929 165 TPNTPLAQ---AQLTALQAESAALKALV-------DELE--LAQL--SANNR--QELArLRSELAK--KRSQQLDAYLQA 226
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 590 FHSQIAAQ---------TSASVLAE---ELHKVIAE---KDKQLKQTEDSLASEQDHLASKE-QELKDVQNVNFLLKA-- 651
Cdd:PRK10929 227 LRNQLNSQrqreaeralESTELLAEqsgDLPKSIVAqfkINRELSQALNQQAQRMDLIASQQrQAASQTLQVRQALNTlr 306
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 652 -EVQKLQALAKEQAAAAHEVEK---MQKSvhvkddkirlleEQLQREVAS-RVEELK---ILNDQNKALQLEVQKLQAVV 723
Cdd:PRK10929 307 eQSQWLGVSNALGEALRAQVARlpeMPKP------------QQLDTEMAQlRVQRLRyedLLNKQPQLRQIRQADGQPLT 374
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958681425 724 SEQpnkdvveqmkKCIQekDEKLRTVEELLETGLIQVATREEELNAIRTENSSLT---KEVQE 783
Cdd:PRK10929 375 AEQ----------NRIL--DAQLRTQRELLNSLLSGGDTLILELTKLKVANSQLEdalKEVNE 425
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
937-1241 |
4.20e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 51.48 E-value: 4.20e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 937 SKKAELLKEVQDENKLFKSQVEQLNHQNHQQasfpSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKK----NNDLR 1012
Cdd:COG1196 209 AEKAERYRELKEELKELEAELLLLKLRELEA----ELEELEAELEELEAELEELEAELAELEAELEELRLEleelELELE 284
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1013 EKNWEAMEALASTEKILQDRVNKTSKERQQQVEAVELESKdllkrlfpavsvpshsnysewLRSFEKKAKAcmagpsDTE 1092
Cdd:COG1196 285 EAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEE---------------------LAELEEELEE------LEE 337
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1093 AVKVLEHRLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVE---QEESKWKVKAEESRRTIQQMQSSFTASEQELE 1169
Cdd:COG1196 338 ELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEelaEELLEALRAAAELAAQLEELEEAEEALLERLE 417
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1958681425 1170 RLRHENKAMENLRREREHLEIELEKAEVERSTYVMEVRELKTQLNETHSKLQNEQTERKKVADDLHKAQQSL 1241
Cdd:COG1196 418 RLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLEELAEA 489
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
733-1028 |
5.69e-06 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 50.70 E-value: 5.69e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 733 EQMKK--CIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENssLTKEVQELKAKqmdqvayvLVPFVSLIEDLKKVI 810
Cdd:PRK05771 4 VRMKKvlIVTLKSYKDEVLEALHELGVVHIEDLKEELSNERLRK--LRSLLTKLSEA--------LDKLRSYLPKLNPLR 73
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 811 HEKDGQIKSVEELLEVELLKVANK-EKTVQALKQEIEILKEEIgnaqlekahqlsvtsqvQELQNLLrgkeEQVDSMKA- 888
Cdd:PRK05771 74 EEKKKVSVKSLEELIKDVEEELEKiEKEIKELEEEISELENEI-----------------KELEQEI----ERLEPWGNf 132
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 889 --ALEDLTGREKCTQVCSTPRFEELENVLKEKDNEIKRIEAILKDT--------KSDLSKKAELLKEVQDENKlfksqve 958
Cdd:PRK05771 133 dlDLSLLLGFKYVSVFVGTVPEDKLEELKLESDVENVEYISTDKGYvyvvvvvlKELSDEVEEELKKLGFERL------- 205
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 959 qlnhqnhqqaSFPSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNDL-----------REKNwEAMEALASTEK 1027
Cdd:PRK05771 206 ----------ELEEEGTPSELIREIKEELEEIEKERESLLEELKELAKKYLEEllalyeyleieLERA-EALSKFLKTDK 274
|
.
gi 1958681425 1028 I 1028
Cdd:PRK05771 275 T 275
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
603-1188 |
6.72e-06 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 50.67 E-value: 6.72e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 603 LAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQ---ELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQ---KS 676
Cdd:PRK01156 188 LEEKLKSSNLELENIKKQIADDEKSHSITLKEIERlsiEYNNAMDDYNNLKSALNELSSLEDMKNRYESEIKTAEsdlSM 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 677 VHVKDDKIRLLEEQLQR-----EVASRVEELKILNDQNKALQLevqklqavvseqpnKDVVEQMKKCIQEKDEKLRTVEE 751
Cdd:PRK01156 268 ELEKNNYYKELEERHMKiindpVYKNRNYINDYFKYKNDIENK--------------KQILSNIDAEINKYHAIIKKLSV 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 752 LletgliqvATREEELNAIRTENSSLTKEVQELKAKQMDQVAYVlvpfvSLIEDLKKVIHEKDGQIKSVEELLEVELLKV 831
Cdd:PRK01156 334 L--------QKDYNDYIKKKSRYDDLNNQILELEGYEMDYNSYL-----KSIESLKKKIEEYSKNIERMSAFISEILKIQ 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 832 ANKEKTVQALKQEIEILKEEIgnaqlekahqlsvTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKCTqVCSTPRFEE- 910
Cdd:PRK01156 401 EIDPDAIKKELNEINVKLQDI-------------SSKVSSLNQRIRALRENLDELSRNMEMLNGQSVCP-VCGTTLGEEk 466
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 911 LENVLKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQD-ENKLFKSQVEQLNHQNHQQASFPSQeelQTVISEKEKEITD 989
Cdd:PRK01156 467 SNHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKrKEYLESEEINKSINEYNKIESARAD---LEDIKIKINELKD 543
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 990 LCNELESLKNavEHQRKKNNDLREKNWEAMEALASTEKILQDRVNKTSKERQQQVEAVELESKDLLKRLFPAVSVPSHS- 1068
Cdd:PRK01156 544 KHDKYEEIKN--RYKSLKLEDLDSKRTSWLNALAVISLIDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSYIDKSi 621
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1069 -NYSEWLRSFEKKAKACMAGPSDTEAV-KVLEHRLKEANEMHTLLQLECEkYKSVLAETEGILQKLQRSVEQ---EESKW 1143
Cdd:PRK01156 622 rEIENEANNLNNKYNEIQENKILIEKLrGKIDNYKKQIAEIDSIIPDLKE-ITSRINDIEDNLKKSRKALDDakaNRARL 700
|
570 580 590 600
....*....|....*....|....*....|....*....|....*
gi 1958681425 1144 KVKAEESRRTIQQMQSSFTASEQELERLRHENKAMENLRREREHL 1188
Cdd:PRK01156 701 ESTIEILRTRINELSDRINDINETLESMKKIKKAIGDLKRLREAF 745
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
413-643 |
1.63e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 49.24 E-value: 1.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 413 VREQMEAEIAHLKQENGILRDAVSNTTNQLESKQsAELNKLRQDCGrlVSELNEKTGKLQQegvQKKNAEQAAAQLKVQL 492
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPELRKELEEAE-AALEEFRQKNG--LVDLSEEAKLLLQ---QLSELESQLAEARAEL 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 493 QEAERRWEEVQSYIRKRTAEHEAAQQDlqskfvakeNEVQSLHSKLtdtlvskQQLEQRLMQLMESEQKRASQeesmqiq 572
Cdd:COG3206 236 AEAEARLAALRAQLGSGPDALPELLQS---------PVIQQLRAQL-------AELEAELAELSARYTPNHPD------- 292
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958681425 573 VQDILEQNEALKAQIQQFHSQIAAQTSASVlaeelhKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQ 643
Cdd:COG3206 293 VIALRAQIAALRAQLQQEAQRILASLEAEL------EALQAREASLQAQLAQLEARLAELPELEAELRRLE 357
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
477-1201 |
1.63e-05 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 49.75 E-value: 1.63e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 477 QKKNAEQAAAQLKVQLQEAERRWEEvqsyiRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLM 556
Cdd:PTZ00121 1096 AFGKAEEAKKTETGKAEEARKAEEA-----KKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEAR 1170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 557 ESEQKRASQEESMQIQVQDILEQNEALKAQiqqfHSQIAAQTSASVLAEELHKviAEKDKQLKQTEDSLASEQDHLASKE 636
Cdd:PTZ00121 1171 KAEDAKKAEAARKAEEVRKAEELRKAEDAR----KAEAARKAEEERKAEEARK--AEDAKKAEAVKKAEEAKKDAEEAKK 1244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 637 QElkDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKmqksvhvKDDKIRLLEEQLQREVASRVEELKILNDQNKALQLEV 716
Cdd:PTZ00121 1245 AE--EERNNEEIRKFEEARMAHFARRQAAIKAEEAR-------KADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAK 1315
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 717 QKLQAVVSEQPNKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAK-----QMDQ 791
Cdd:PTZ00121 1316 KADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKaeekkKADE 1395
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 792 VAYVLVPFVSLIEDLKKVIHEK----DGQIKSVEELLEVELLKVANKEKTVQALKQEIEILK--EEIGNAQLEKAHQLSV 865
Cdd:PTZ00121 1396 AKKKAEEDKKKADELKKAAAAKkkadEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKkaEEAKKKAEEAKKADEA 1475
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 866 TSQVQELQNLLRGKEEQVDSMKAALEDLTGREKCTQVCSTPRFEELENVLKEKDNEIKRIEAILKdtKSDLSKKAELLKE 945
Cdd:PTZ00121 1476 KKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAK--KAEEKKKADELKK 1553
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 946 VQDENKLF-KSQVEQLNHQNHQQASFPSQEELQTVISEKEKEITDLCNELESLKNAveHQRKKNNDLREKNWEAMEALAS 1024
Cdd:PTZ00121 1554 AEELKKAEeKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKA--EEAKKAEEAKIKAEELKKAEEE 1631
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1025 TEKILQDRvNKTSKERQQQVEAVELESKDLLKRLFPAVSVPSHSNYSEWLRSFE--KKAKACMAGPSDTEAVKVLEHRLK 1102
Cdd:PTZ00121 1632 KKKVEQLK-KKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEedEKKAAEALKKEAEEAKKAEELKKK 1710
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1103 EANEMHtllqlECEKYKSVLAETEGILQKLQRSVEQEeskwKVKAEESRRTIQQMQSSFTASEQELERLRHENKAMENLR 1182
Cdd:PTZ00121 1711 EAEEKK-----KAEELKKAEEENKIKAEEAKKEAEED----KKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEAVI 1781
|
730
....*....|....*....
gi 1958681425 1183 REREHLEIELEKAEVERST 1201
Cdd:PTZ00121 1782 EEELDEEDEKRRMEVDKKI 1800
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
444-644 |
1.66e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.61 E-value: 1.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 444 SKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDL--Q 521
Cdd:COG4942 23 AEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELeaQ 102
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 522 SKFVAKENEVQSLHSKLTDTLV-----SKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAA 596
Cdd:COG4942 103 KEELAELLRALYRLGRQPPLALllspeDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAE 182
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1958681425 597 QTSAsvlAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQN 644
Cdd:COG4942 183 LEEE---RAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEA 227
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
418-961 |
3.91e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 48.14 E-value: 3.91e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 418 EAEIAHLKQENGILRDAVSNTTNQLESKQ---SAELNKLRqdcgRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQE 494
Cdd:PRK03918 188 TENIEELIKEKEKELEEVLREINEISSELpelREELEKLE----KEVKELEELKEEIEELEKELESLEGSKRKLEEKIRE 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 495 AERRWEEVqsyiRKRTAEHEAAQQDLQS-KFVAKE-NEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQ 572
Cdd:PRK03918 264 LEERIEEL----KKEIEELEEKVKELKElKEKAEEyIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEER 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 573 VQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKViaeKDKQLKQTEDSLASEQDHLASKEQELKDVQNVnflLKAE 652
Cdd:PRK03918 340 LEELKKKLKELEKRLEELEERHELYEEAKAKKEELERL---KKRLTGLTPEKLEKELEELEKAKEEIEEEISK---ITAR 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 653 VQKLQALAKEQAAAAHEVEKMQKSVHV------KDDKIRLLEEQLqREVASRVEELKILNDQNKALQLEVQKLQAVVSEQ 726
Cdd:PRK03918 414 IGELKKEIKELKKAIEELKKAKGKCPVcgreltEEHRKELLEEYT-AELKRIEKELKEIEEKERKLRKELRELEKVLKKE 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 727 PNKDVVEQMKKCIQEKDEKLRTVE-ELLETGLIQVATREEELNAIRTENSSLTKEVQELKA--KQMDQVAYVLVPFVSLI 803
Cdd:PRK03918 493 SELIKLKELAEQLKELEEKLKKYNlEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEElkKKLAELEKKLDELEEEL 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 804 EDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQLEkahqlsvtsqvqelqnlLRGKEEQV 883
Cdd:PRK03918 573 AELLKELEELGFESVEELEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEE-----------------LDKAFEEL 635
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 884 DSMKAALEDLTGR-EKCTQVCSTPRFEELENVLKEKDNEIKRIEAILKDTKS---DLSKKAELLKEVQDENKLFKSQVEQ 959
Cdd:PRK03918 636 AETEKRLEELRKElEELEKKYSEEEYEELREEYLELSRELAGLRAELEELEKrreEIKKTLEKLKEELEEREKAKKELEK 715
|
..
gi 1958681425 960 LN 961
Cdd:PRK03918 716 LE 717
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
669-998 |
4.97e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 47.76 E-value: 4.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 669 EVEKMQKSVHVKDDKIRLLEEQLQREVASRVEELKIlndqnKALQLEVQKLQAVVSEQPNKDVVEQmkkcIQEKDEKLRT 748
Cdd:TIGR02169 178 ELEEVEENIERLDLIIDEKRQQLERLRREREKAERY-----QALLKEKREYEGYELLKEKEALERQ----KEAIERQLAS 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 749 VEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKQMDQVAyvlvpfvSLIEDLKKVIHEKDGQIKSVEELLEVEL 828
Cdd:TIGR02169 249 LEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVK-------EKIGELEAEIASLERSIAEKERELEDAE 321
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 829 LKVANKEKTVQALKQEIEILKEEIGNAQLEKAhqlSVTSQVQELQ---NLLRGKEEQVDSMKAALEDLTGREKCTQVCST 905
Cdd:TIGR02169 322 ERLAKLEAEIDKLLAEIEELEREIEEERKRRD---KLTEEYAELKeelEDLRAELEEVDKEFAETRDELKDYREKLEKLK 398
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 906 PRFEELENVLKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQEE-----LQTVI 980
Cdd:TIGR02169 399 REINELKRELDRLQEELQRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEqelydLKEEY 478
|
330
....*....|....*...
gi 1958681425 981 SEKEKEITDLCNELESLK 998
Cdd:TIGR02169 479 DRVEKELSKLQRELAEAE 496
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
291-982 |
4.97e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 47.76 E-value: 4.97e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 291 LSLKTMMFSEDEALCVVDLLKEKSGVIKEAlkksnKGELSGLLHQLQEKERLLTATKEDAAATKERCKQLTQEMMTEKER 370
Cdd:TIGR02169 277 LNKKIKDLGEEEQLRVKEKIGELEAEIASL-----ERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKR 351
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 371 SSVVMARMKERIGTLEKEHNIFQN---KMHVSYQETQQMQMKFEQVREQME---AEIAHLKQENGILRDAVSNTTNQLES 444
Cdd:TIGR02169 352 RDKLTEEYAELKEELEDLRAELEEvdkEFAETRDELKDYREKLEKLKREINelkRELDRLQEELQRLSEELADLNAAIAG 431
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 445 KQsAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKF 524
Cdd:TIGR02169 432 IE-AKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKELSKLQRELAEAEAQARASEERVRGGR 510
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 525 VAKE---NEVQSLHSKLT---------------------------DTLVSKQQLEQ--------------RLMQLMESEQ 560
Cdd:TIGR02169 511 AVEEvlkASIQGVHGTVAqlgsvgeryataievaagnrlnnvvveDDAVAKEAIELlkrrkagratflplNKMRDERRDL 590
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 561 KRASQEESMQIQV-----------------QD--ILEQNEALKAQIQQFH---------SQIAAQTSASVLAEELHKVIA 612
Cdd:TIGR02169 591 SILSEDGVIGFAVdlvefdpkyepafkyvfGDtlVVEDIEAARRLMGKYRmvtlegelfEKSGAMTGGSRAPRGGILFSR 670
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 613 EKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQ 692
Cdd:TIGR02169 671 SEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEKLKERLEELEEDLSSLE 750
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 693 REVASRVEELKILNDQNKALQLEVQKLQAVVSEQPNKDVVEQmkkcIQEKDEKLRTVEELLETGLIQVATREEELNAIRT 772
Cdd:TIGR02169 751 QEIENVKSELKELEARIEELEEDLHKLEEALNDLEARLSHSR----IPEIQAELSKLEEEVSRIEARLREIEQKLNRLTL 826
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 773 ENSSLTKEVQELKAKQMDqvayvlvpFVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEI 852
Cdd:TIGR02169 827 EKEYLEKEIQELQEQRID--------LKEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESRLGDLKKERDELEAQL 898
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 853 GNAQLEKAHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKCTQVCsTPRFEELENVLKEKDNEIKRIEAI---- 928
Cdd:TIGR02169 899 RELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEE-ELSLEDVQAELQRVEEEIRALEPVnmla 977
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 929 ------LKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQEELQTVISE 982
Cdd:TIGR02169 978 iqeyeeVLKRLDELKEKRAKLEEERKAILERIEEYEKKKREVFMEAFEAINENFNEIFAE 1037
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
613-997 |
5.75e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.45 E-value: 5.75e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 613 EKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAhEVEKMQKSVHVKDDKIRLLEEQLQ 692
Cdd:COG4717 78 EELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQ-ELEALEAELAELPERLEELEERLE 156
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 693 rEVASRVEELKILNDQNKALQLEVQKLQAVVSEQpNKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRT 772
Cdd:COG4717 157 -ELRELEEELEELEAELAELQEELEELLEQLSLA-TEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLEN 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 773 ENSSLTKEVQELKAKQMDQVAYVLVPFVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILkeei 852
Cdd:COG4717 235 ELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQAL---- 310
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 853 gnAQLEKAHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLtgREKCTQVCSTPRFEELENVLKEKDNEIKRIEAILKDT 932
Cdd:COG4717 311 --PALEELEEEELEELLAALGLPPDLSPEELLELLDRIEEL--QELLREAEELEEELQLEELEQEIAALLAEAGVEDEEE 386
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958681425 933 KSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQEELQTVISEKEKEITDLCNELESL 997
Cdd:COG4717 387 LRAALEQAEEYQELKEELEELEEQLEELLGELEELLEALDEEELEEELEELEEELEELEEELEEL 451
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
479-639 |
1.13e-04 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 46.87 E-value: 1.13e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 479 KNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSkfvakENEVQSLHSkltdtlvskqQLEQRLMQLmeS 558
Cdd:COG3096 508 QALAQRLQQLRAQLAELEQRLRQQQNAERLLEEFCQRIGQQLDA-----AEELEELLA----------ELEAQLEEL--E 570
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 559 EQKRASQEESMQIQvqdilEQNEALKAQIQQFHSQ----IAAQTSASVLAEELHKVIA-------------EKDKQLKQT 621
Cdd:COG3096 571 EQAAEAVEQRSELR-----QQLEQLRARIKELAARapawLAAQDALERLREQSGEALAdsqevtaamqqllEREREATVE 645
|
170
....*....|....*...
gi 1958681425 622 EDSLASEQDHLASKEQEL 639
Cdd:COG3096 646 RDELAARKQALESQIERL 663
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
907-1221 |
1.30e-04 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 46.59 E-value: 1.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 907 RFEELENVLKEKDNEIKRIEAILKDTKSDL------SKKAELLKEVQDENK---------LFKSQVEQLNHQNHQQASFP 971
Cdd:TIGR02168 173 RRKETERKLERTRENLDRLEDILNELERQLkslerqAEKAERYKELKAELRelelallvlRLEELREELEELQEELKEAE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 972 SQ-EELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNDLreknweamealasteKILQDRVNKTSKERQQQVEAVELE 1050
Cdd:TIGR02168 253 EElEELTAELQELEEKLEELRLEVSELEEEIEELQKELYAL---------------ANEISRLEQQKQILRERLANLERQ 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1051 SKDLLKRLfpavsvpshsnySEWLRSFEKKAkacmagpsdtEAVKVLEHRLKEANEMHTLLQLECEKYKSVLAETEGILQ 1130
Cdd:TIGR02168 318 LEELEAQL------------EELESKLDELA----------EELAELEEKLEELKEELESLEAELEELEAELEELESRLE 375
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1131 KLQRSVEQEESKW---KVKAEESRRTIQQMQSSFTASEQELERLRHENKA---------MENLRREREHLEIELEKAEVE 1198
Cdd:TIGR02168 376 ELEEQLETLRSKVaqlELQIASLNNEIERLEARLERLEDRRERLQQEIEEllkkleeaeLKELQAELEELEEELEELQEE 455
|
330 340
....*....|....*....|...
gi 1958681425 1199 RSTYVMEVRELKTQLNETHSKLQ 1221
Cdd:TIGR02168 456 LERLEEALEELREELEEAEQALD 478
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
681-1223 |
1.67e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 46.19 E-value: 1.67e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 681 DDKIRLLEEQLQREVASRVEELKILNDQNKALQ------LEVQKLQAVVSEQPNKDvvEQMKKCIQEKDEKLRTVEELLE 754
Cdd:PRK02224 219 DEEIERYEEQREQARETRDEADEVLEEHEERREeletleAEIEDLRETIAETERER--EELAEEVRDLRERLEELEEERD 296
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 755 TGLIQVATREEELNAIRTENSSLTKEVQELKaKQMDQVAYVLVPFVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANK 834
Cdd:PRK02224 297 DLLAEAGLDDADAEAVEARREELEDRDEELR-DRLEECRVAAQAHNEEAESLREDADDLEERAEELREEAAELESELEEA 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 835 EKTVQALKQEIEILKEEI-------GNA--QLEKAHQLS---------VTSQVQELQNLLRGKEEQVDSMKAALEDLTGR 896
Cdd:PRK02224 376 REAVEDRREEIEELEEEIeelrerfGDApvDLGNAEDFLeelreerdeLREREAELEATLRTARERVEEAEALLEAGKCP 455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 897 EKCTQVCSTPRFEELEnvlkEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLfKSQVEQLnhQNHQQASFPSQEEL 976
Cdd:PRK02224 456 ECGQPVEGSPHVETIE----EDRERVEELEAELEDLEEEVEEVEERLERAEDLVEA-EDRIERL--EERREDLEELIAER 528
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 977 QTVISEKEKEITDLCNELESLKNAVEHQRKKNNDLREKNWEAMEALASTEKILQdrvnkTSKERQQQVEAVEleskDLLK 1056
Cdd:PRK02224 529 RETIEEKRERAEELRERAAELEAEAEEKREAAAEAEEEAEEAREEVAELNSKLA-----ELKERIESLERIR----TLLA 599
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1057 RLfpavsvpshSNYSEWLRSFEKKAKACmagpsdTEAVKVLEHRLKEANEMHTllQLECEKYKSVLAETEGILQKLQRSV 1136
Cdd:PRK02224 600 AI---------ADAEDEIERLREKREAL------AELNDERRERLAEKRERKR--ELEAEFDEARIEEAREDKERAEEYL 662
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1137 EQEESKWKVKAEEsRRTIQQMQSSFTASEQELERLRHENKAMENlrrEREHLEIELEKAEVERSTYvMEVR-ELKTQLNE 1215
Cdd:PRK02224 663 EQVEEKLDELREE-RDDLQAEIGAVENELEELEELRERREALEN---RVEALEALYDEAEELESMY-GDLRaELRQRNVE 737
|
....*...
gi 1958681425 1216 THSKLQNE 1223
Cdd:PRK02224 738 TLERMLNE 745
|
|
| Golgin_A5 |
pfam09787 |
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining ... |
399-602 |
1.70e-04 |
|
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining Golgi structure. They stimulate the formation of Golgi stacks and ribbons, and are involved in intra-Golgi retrograde transport. Two main interactions have been characterized: one with RAB1A that has been activated by GTP-binding and another with isoform CASP of CUTL1.
Pssm-ID: 462900 [Multi-domain] Cd Length: 305 Bit Score: 45.13 E-value: 1.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 399 SYQETQQMQMKFEQVREQMEAEIAHLKQENGiLRDAVSNTTNQLESKQS--------AELNKLRQDCGRLVSELNEKTGK 470
Cdd:pfam09787 5 AKQELADYKQKAARILQSKEKLIASLKEGSG-VEGLDSSTALTLELEELrqerdllrEEIQKLRGQIQQLRTELQELEAQ 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 471 LQQEGVQkknAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDL-------QSKFVAKENEVQSLHSKLTD--- 540
Cdd:pfam09787 84 QQEEAES---SREQLQELEEQLATERSARREAEAELERLQEELRYLEEELrrskatlQSRIKDREAEIEKLRNQLTSksq 160
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1958681425 541 TLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSASV 602
Cdd:pfam09787 161 SSSSQSELENRLHQLTETLIQKQTMLEALSTEKNSLVLQLERMEQQIKELQGEGSNGTSINM 222
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
835-1239 |
2.24e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 45.68 E-value: 2.24e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 835 EKTVQALKQEIEILKEEIGNAQlekahqlsvtSQVQELQNLLRGKEEQVDSMKAALEDLTGREKctqvcstprfEELENV 914
Cdd:COG4913 287 QRRLELLEAELEELRAELARLE----------AELERLEARLDALREELDELEAQIRGNGGDRL----------EQLERE 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 915 LKEKDNEIKRIEAILKDTKSDLSK-------KAELLKEVQDENKLFKSQVEQLNHQNHQQASfpsqeELQTVISEKEKEI 987
Cdd:COG4913 347 IERLERELEERERRRARLEALLAAlglplpaSAEEFAALRAEAAALLEALEEELEALEEALA-----EAEAALRDLRREL 421
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 988 TDLCNELESLKnavehQRKKNNDLR-------------------------------EKNWE-AMEALAST---------- 1025
Cdd:COG4913 422 RELEAEIASLE-----RRKSNIPARllalrdalaealgldeaelpfvgelievrpeEERWRgAIERVLGGfaltllvppe 496
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1026 -EKILQDRVNKTSKERQQQVEAVELESKDLLKRLFPAVSVP-----SHSNYSEWLRSF------------------EKKA 1081
Cdd:COG4913 497 hYAAALRWVNRLHLRGRLVYERVRTGLPDPERPRLDPDSLAgkldfKPHPFRAWLEAElgrrfdyvcvdspeelrrHPRA 576
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1082 --KACMA---------------------GPSDTEAVKVLEHRLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQ 1138
Cdd:COG4913 577 itRAGQVkgngtrhekddrrrirsryvlGFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEY 656
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1139 EESkwKVKAEESRRTIQQMqssftasEQELERLRHENKAMENLRREREHLEIELEKAEVERstyvmevRELKTQLNETHS 1218
Cdd:COG4913 657 SWD--EIDVASAEREIAEL-------EAELERLDASSDDLAALEEQLEELEAELEELEEEL-------DELKGEIGRLEK 720
|
490 500
....*....|....*....|.
gi 1958681425 1219 KLQNEQTERKKVADDLHKAQQ 1239
Cdd:COG4913 721 ELEQAEEELDELQDRLEAAED 741
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
470-755 |
2.26e-04 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 45.66 E-value: 2.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 470 KLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLhsKLTDTLVSKQQLE 549
Cdd:PLN02939 64 KLQSNTDENGQLENTSLRTVMELPQKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEQLSDF--QLEDLVGMIQNAE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 550 QRLMQLmesEQKRASQEEsmqiQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQLKQTEDSL---- 625
Cdd:PLN02939 142 KNILLL---NQARLQALE----DLEKILTEKEALQGKINILEMRLSETDARIKLAAQEKIHVEILEEQLEKLRNELlirg 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 626 ASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLqreVASRVEELKIL 705
Cdd:PLN02939 215 ATEGLCVHSLSKELDVLKEENMLLKDDIQFLKAELIEVAETEERVFKLEKERSLLDASLRELESKF---IVAQEDVSKLS 291
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1958681425 706 NDQNKALQLEVQKLQAVVSEQPNKdvVEQMKKCIQEKDEKLRTVEELLET 755
Cdd:PLN02939 292 PLQYDCWWEKVENLQDLLDRATNQ--VEKAALVLDQNQDLRDKVDKLEAS 339
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
472-711 |
2.40e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.39 E-value: 2.40e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 472 QQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVakENEVQSLHSKLTDTLVSKQQLEQR 551
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLVDLSEEAKLL--LQQLSELESQLAEARAELAEAEAR 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 552 LMQLmesEQKRASQEESMQIQVQDILEQNeaLKAQIQQFHSQIAAQtsaSVLAEELHKVIAEKDKQLKQTEDSLASEqdh 631
Cdd:COG3206 242 LAAL---RAQLGSGPDALPELLQSPVIQQ--LRAQLAELEAELAEL---SARYTPNHPDVIALRAQIAALRAQLQQE--- 310
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 632 laskeqelkdVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQ------REVASRVEELKIL 705
Cdd:COG3206 311 ----------AQRILASLEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEvarelyESLLQRLEEARLA 380
|
....*.
gi 1958681425 706 NDQNKA 711
Cdd:COG3206 381 EALTVG 386
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
477-686 |
7.32e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 7.32e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 477 QKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQ---DLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLM 553
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERriaALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 554 QLME--SEQKRASQEESMQIQVQDILEQ----------------NEALKAQIQQFHSQIAA----QTSASVLAEELHKVI 611
Cdd:COG4942 101 AQKEelAELLRALYRLGRQPPLALLLSPedfldavrrlqylkylAPARREQAEELRADLAElaalRAELEAERAELEALL 180
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958681425 612 AEKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRL 686
Cdd:COG4942 181 AELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALKGKL 255
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
748-945 |
7.64e-04 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 42.60 E-value: 7.64e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 748 TVEELLETgLIQVATREEELNAIRTENSSLTKEVQELKaKQMDQVAYVLVPFVSLIEDLKKVIHEKDGQIKSVEELLEVE 827
Cdd:COG1579 1 AMPEDLRA-LLDLQELDSELDRLEHRLKELPAELAELE-DELAALEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKY 78
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 828 LLKVAN--KEKTVQALKQEIEILKEEIgnAQLEKaHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTgrekctqvcst 905
Cdd:COG1579 79 EEQLGNvrNNKEYEALQKEIESLKRRI--SDLED-EILELMERIEELEEELAELEAELAELEAELEEKK----------- 144
|
170 180 190 200
....*....|....*....|....*....|....*....|
gi 1958681425 906 prfEELENVLKEKDNEIKRIEAILKDTKSDLSkkAELLKE 945
Cdd:COG1579 145 ---AELDEELAELEAELEELEAEREELAAKIP--PELLAL 179
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
437-726 |
7.70e-04 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 43.96 E-value: 7.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 437 NTTNQLESKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQ---EAERRWEEVQSYIRKRtaEH 513
Cdd:pfam17380 285 SERQQQEKFEKMEQERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERmamERERELERIRQEERKR--EL 362
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 514 EAAQQDLQSKFVAKENEVQSLHskltdtlVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQiQQFHSQ 593
Cdd:pfam17380 363 ERIRQEEIAMEISRMRELERLQ-------MERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAE-QEEARQ 434
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 594 IAAQTSASVLAEELHKVIAEKDKQLKQTEDSLASEQDHLASK--------EQELKDVQNVNFL---LKAEVQKLQALAKE 662
Cdd:pfam17380 435 REVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKlelekekrDRKRAEEQRRKILekeLEERKQAMIEEERK 514
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958681425 663 QAAAAHEVEKMQKSVHvKDDKIRLLEEQLQREVasRVEELKILNDQNKALQLEVQKLQAVVSEQ 726
Cdd:pfam17380 515 RKLLEKEMEERQKAIY-EEERRREAEEERRKQQ--EMEERRRIQEQMRKATEERSRLEAMERER 575
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
803-1007 |
8.12e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.21 E-value: 8.12e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 803 IEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQLEKAH-QLSVTSQVQELQNLLRG--K 879
Cdd:COG4942 36 IAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAElRAELEAQKEELAELLRAlyR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 880 EEQVDSMKAAL--EDLTGREKCTQVcstprFEELENVLKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQV 957
Cdd:COG4942 116 LGRQPPLALLLspEDFLDAVRRLQY-----LKYLAPARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAAL 190
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1958681425 958 EQL-NHQNHQQASFPSQE-ELQTVISEKEKEITDLCNELESLKNAVEHQRKK 1007
Cdd:COG4942 191 EALkAERQKLLARLEKELaELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| MARTX_Nterm |
NF012221 |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ... |
414-655 |
8.14e-04 |
|
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.
Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 44.05 E-value: 8.14e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 414 REQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNK--------LRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAA 485
Cdd:NF012221 1564 KERAEADRQRLEQEKQQQLAAISGSQSQLESTDQNALETngqaqrdaILEESRAVTKELTTLAQGLDALDSQATYAGESG 1643
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 486 AQLKVQLqeAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKlTDTLVskQQLEQRLMQLMESEQKRASQ 565
Cdd:NF012221 1644 DQWRNPF--AGGLLDRVQEQLDDAKKISGKQLADAKQRHVDNQQKVKDAVAK-SEAGV--AQGEQNQANAEQDIDDAKAD 1718
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 566 EESMQIQVqdILEQNEALKAQIQQFHS----QIAAQTSASVLAEELHKVIAEKdKQLKQTEDSLASEQ----DHLASKEQ 637
Cdd:NF012221 1719 AEKRKDDA--LAKQNEAQQAESDANAAandaQSRGEQDASAAENKANQAQADA-KGAKQDESDKPNRQgaagSGLSGKAY 1795
|
250
....*....|....*...
gi 1958681425 638 ELKDVQNVNFLLKAEVQK 655
Cdd:NF012221 1796 SVEGVAEPGSHINPDSPA 1813
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
868-1240 |
9.49e-04 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 43.60 E-value: 9.49e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 868 QVQELQNLLRGKEEQVDSMKAALEDLTGREKctqvcstpRFEELENVLKEKDNEIKRIEAILK--DTKSDLSKKAELLKE 945
Cdd:COG4717 72 ELKELEEELKEAEEKEEEYAELQEELEELEE--------ELEELEAELEELREELEKLEKLLQllPLYQELEALEAELAE 143
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 946 VQDENKLFKSQVEQLNHQNHQQasfpsqEELQTVISEKEKEITDLCNEL-ESLKNAVEHQRKKNNDLREKNWEAMEALAS 1024
Cdd:COG4717 144 LPERLEELEERLEELRELEEEL------EELEAELAELQEELEELLEQLsLATEEELQDLAEELEELQQRLAELEEELEE 217
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1025 TEKILQD---RVNKTSKERQQQVEAVELESKDLLKRLFPAVSV---PSHSNYSE----------------WLRSFEKKAK 1082
Cdd:COG4717 218 AQEELEEleeELEQLENELEAAALEERLKEARLLLLIAAALLAllgLGGSLLSLiltiagvlflvlgllaLLFLLLAREK 297
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1083 ACMAGPSDTEAVKVLEHRLKEANEMHTLLQLECEKYKSV-----LAETEGILQKLQRSVEQEESKWKVKAEESRRTiQQM 1157
Cdd:COG4717 298 ASLGKEAEELQALPALEELEEEELEELLAALGLPPDLSPeelleLLDRIEELQELLREAEELEEELQLEELEQEIA-ALL 376
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1158 QSSFTASEQELERLRHENKAMENLRREREHLEIELEKAEVERSTYVM---------EVRELKTQLNETHSKLQNEQTERK 1228
Cdd:COG4717 377 AEAGVEDEEELRAALEQAEEYQELKEELEELEEQLEELLGELEELLEaldeeeleeELEELEEELEELEEELEELREELA 456
|
410
....*....|..
gi 1958681425 1229 KVADDLHKAQQS 1240
Cdd:COG4717 457 ELEAELEQLEED 468
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
414-534 |
1.04e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 43.75 E-value: 1.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 414 REQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDCGRLVSELNEKTGKLQQE-------GVQKKNAEQAAA 486
Cdd:COG4913 304 LARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLeallaalGLPLPASAEEFA 383
|
90 100 110 120
....*....|....*....|....*....|....*....|....*...
gi 1958681425 487 QLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSL 534
Cdd:COG4913 384 ALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASL 431
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
411-599 |
1.12e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.47 E-value: 1.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 411 EQVREQM---EAEIAHLKQENGILrdAVSNTTNQLESKQS---AELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQA 484
Cdd:COG3206 185 PELRKELeeaEAALEEFRQKNGLV--DLSEEAKLLLQQLSeleSQLAEARAELAEAEARLAALRAQLGSGPDALPELLQS 262
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 485 AA--QLKVQLQEAERRWEE-----------VQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQR 551
Cdd:COG3206 263 PViqQLRAQLAELEAELAElsarytpnhpdVIALRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEAR 342
|
170 180 190 200
....*....|....*....|....*....|....*....|....*...
gi 1958681425 552 LMQLMESEQKRASQEESMQIQvQDILEQneaLKAQIQQFHSQIAAQTS 599
Cdd:COG3206 343 LAELPELEAELRRLEREVEVA-RELYES---LLQRLEEARLAEALTVG 386
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
322-534 |
1.13e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 1.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 322 KKSNKGELSGLLHQLQEKERLLTATKEDAAATKERCKQLTQEMmtekerssvvmARMKERIGTLEKEHNIFQNKMHVSYQ 401
Cdd:COG4942 22 AAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRI-----------AALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 402 ETQQMQMKFEQVREQMEAEIAHLKQENGI-----------LRDAVSNTT--NQLESKQSAELNKLRQDcgrlVSELNEKT 468
Cdd:COG4942 91 EIAELRAELEAQKEELAELLRALYRLGRQpplalllspedFLDAVRRLQylKYLAPARREQAEELRAD----LAELAALR 166
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1958681425 469 GKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSL 534
Cdd:COG4942 167 AELEAERAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARL 232
|
|
| COG2433 |
COG2433 |
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only]; |
594-754 |
1.14e-03 |
|
Possible nuclease of RNase H fold, RuvC/YqgF family [General function prediction only];
Pssm-ID: 441980 [Multi-domain] Cd Length: 644 Bit Score: 43.31 E-value: 1.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 594 IAAQTSASVLAEELHKVIAEKDKQlkqTEDSLASEQDHLASKEQELKDvqnvnflLKAEVQKLQalakeqaaaaHEVEKM 673
Cdd:COG2433 373 IRGLSIEEALEELIEKELPEEEPE---AEREKEHEERELTEEEEEIRR-------LEEQVERLE----------AEVEEL 432
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 674 QKSVHVKDDKIRLLEEQLQRevASRVEELKILNDQnkalqlEVQKLQAvvseqpnkdVVEQMKKCIQEKDEKLRTVEELL 753
Cdd:COG2433 433 EAELEEKDERIERLERELSE--ARSEERREIRKDR------EISRLDR---------EIERLERELEEERERIEELKRKL 495
|
.
gi 1958681425 754 E 754
Cdd:COG2433 496 E 496
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
830-1042 |
1.21e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.83 E-value: 1.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 830 KVANKEKTVQALKQEIEILKEEIGNAQLEKAHQL----SVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKCTQVCST 905
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLkqlaALERRIAALARRIRALEQELAALEAELAELEKEIAELRAELE 100
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 906 PRFEELENVLKE--KDNEIKRIEAILK-DTKSDLSKKAELLKEVQDENKlfkSQVEQLNHQnhqqasfpsQEELQTVISE 982
Cdd:COG4942 101 AQKEELAELLRAlyRLGRQPPLALLLSpEDFLDAVRRLQYLKYLAPARR---EQAEELRAD---------LAELAALRAE 168
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 983 KEKEItdlcNELESLKNAVEHQRKKNNDLREKNWEAMEALASTEKILQDRVNKTSKERQQ 1042
Cdd:COG4942 169 LEAER----AELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEE 224
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
358-1204 |
1.24e-03 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 43.42 E-value: 1.24e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 358 KQLTQEMMTEKERSSVVMARMKERIGTLEKEHNIFQNKMHVSYQETQQMQMKFEQVREQMEAEIAHLKQENGILRDAVSN 437
Cdd:TIGR00618 165 KKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQTQQSHAY 244
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 438 TTNQLESKQSAElnKLRQDCGRLVSELNEKTGKLqqegvqkknAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQ 517
Cdd:TIGR00618 245 LTQKREAQEEQL--KKQQLLKQLRARIEELRAQE---------AVLEETQERINRARKAAPLAAHIKAVTQIEQQAQRIH 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 518 QDLQSKFVAKENEVQSLHSKLTDTLVSKQQleQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQ 597
Cdd:TIGR00618 314 TELQSKMRSRAKLLMKRAAHVKQQSSIEEQ--RRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQQQKTTL 391
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 598 TSAS-VLAEELHKVIAEKDKQLKQTEdSLASEQDHLASKEQELKDVQNVNFLLKAEVQKlqaLAKEQAAAAHEVEKMQKS 676
Cdd:TIGR00618 392 TQKLqSLCKELDILQREQATIDTRTS-AFRDLQGQLAHAKKQQELQQRYAELCAAAITC---TAQCEKLEKIHLQESAQS 467
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 677 VHVKDDKIRLLEEQLQREVASRVEELKILNdqnkalqlEVQKLQAVVSEQPNKDVVEQMKKCIQEKDEKLrtveelLETG 756
Cdd:TIGR00618 468 LKEREQQLQTKEQIHLQETRKKAVVLARLL--------ELQEEPCPLCGSCIHPNPARQDIDNPGPLTRR------MQRG 533
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 757 LIQVATREEELNAIRTENSSLTKEVQELKAkQMDQVAYVLVPFVSLIEDLKKVIhekdgqiksveellevelLKVANKEK 836
Cdd:TIGR00618 534 EQTYAQLETSEEDVYHQLTSERKQRASLKE-QMQEIQQSFSILTQCDNRSKEDI------------------PNLQNITV 594
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 837 TVQALKQEIEILKEEIGNAQLEKAHQLSVTSQVQELQNLLRGKEEQVDSMKAALEdltgrekctqvcstprfEELENVLK 916
Cdd:TIGR00618 595 RLQDLTEKLSEAEDMLACEQHALLRKLQPEQDLQDVRLHLQQCSQELALKLTALH-----------------ALQLTLTQ 657
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 917 EKDNEIKRieAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQasfpsqEELQTVISEKEKEITDLCNELES 996
Cdd:TIGR00618 658 ERVREHAL--SIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLL------RELETHIEEYDREFNEIENASSS 729
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 997 LKNAVEHQrkknndlreknweamealastEKILQDRVNKTSKERQQQVEAVELESKdllkrlfpavsvpshsnysewlRS 1076
Cdd:TIGR00618 730 LGSDLAAR---------------------EDALNQSLKELMHQARTVLKARTEAHF----------------------NN 766
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1077 FEKKAKACMAGPSDTEAVKVLEHRLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKWKVKAEESRRTIQQ 1156
Cdd:TIGR00618 767 NEEVTAALQTGAELSHLAAEIQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEKSATLGE 846
|
810 820 830 840
....*....|....*....|....*....|....*....|....*...
gi 1958681425 1157 MqssftasEQELERLRHENKAMENLRREREHLEIELEKAEVERSTYVM 1204
Cdd:TIGR00618 847 I-------THQLLKYEECSKQLAQLTQEQAKIIQLSDKLNGINQIKIQ 887
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
326-1248 |
1.29e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 43.50 E-value: 1.29e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 326 KGELSGLLHQLQEKERLLTATKEDAAATKERCKQLTQEMMTEKERSSVVMARMKERIGTLEKEHNIFQNKMHVSYQETQQ 405
Cdd:TIGR01612 785 KSKISEIKNHYNDQINIDNIKDEDAKQNYDKSKEYIKTISIKEDEIFKIINEMKFMKDDFLNKVDKFINFENNCKEKIDS 864
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 406 MQMKFEQVREQMEAEIAHlkqengilrDAVSNTTNQLESKQSAelnklrqdcgrlvseLNEKTGKLQQEGVQKKNAEQAA 485
Cdd:TIGR01612 865 EHEQFAELTNKIKAEISD---------DKLNDYEKKFNDSKSL---------------INEINKSIEEEYQNINTLKKVD 920
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 486 AQLKVqlqeAERRWEEVQSYIRKRTAEHEAAQQDLqsKFVAKENEVQ-SLHSKLTDTLVSKQQLEQRLMQLMESEQKRAS 564
Cdd:TIGR01612 921 EYIKI----CENTKESIEKFHNKQNILKEILNKNI--DTIKESNLIEkSYKDKFDNTLIDKINELDKAFKDASLNDYEAK 994
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 565 QEESMQIqVQDILEQNEALKAQI--QQFHSQIAAQTSASVLAEELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELkdv 642
Cdd:TIGR01612 995 NNELIKY-FNDLKANLGKNKENMlyHQFDEKEKATNDIEQKIEDANKNIPNIEIAIHTSIYNIIDEIEKEIGKNIEL--- 1070
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 643 QNVNFLLKAEV---------QKLQALAKEQAAAAHEVEKMQKSVHVKDDkIRLLEEQLQREVASRVEELKILNDQNKALQ 713
Cdd:TIGR01612 1071 LNKEILEEAEInitnfneikEKLKHYNFDDFGKEENIKYADEINKIKDD-IKNLDQKIDHHIKALEEIKKKSENYIDEIK 1149
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 714 LEVQKLQAVVSEQPNKDVVEQMKKCIQE---KDEKLRTVEELLETGLIQVATREEE---LNAIRTENSSLTKEVQELKAK 787
Cdd:TIGR01612 1150 AQINDLEDVADKAISNDDPEEIEKKIENivtKIDKKKNIYDEIKKLLNEIAEIEKDktsLEEVKGINLSYGKNLGKLFLE 1229
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 788 QMDQ----VAYVLVPFVSLIEDLKKvIHEKDGQIKSVEELLEVELLKVA------NKEKTVQALKQEIEILKEEIGNAQL 857
Cdd:TIGR01612 1230 KIDEekkkSEHMIKAMEAYIEDLDE-IKEKSPEIENEMGIEMDIKAEMEtfnishDDDKDHHIISKKHDENISDIREKSL 1308
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 858 EKAHQLSVTSQVQELQNLLrgKEEQVDSMKAALEDLTGREKCTQVCSTPRFEELENVLKEKDNEIKRIEAILKDTKSDLS 937
Cdd:TIGR01612 1309 KIIEDFSEESDINDIKKEL--QKNLLDAQKHNSDINLYLNEIANIYNILKLNKIKKIIDEVKEYTKEIEENNKNIKDELD 1386
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 938 KKAELLKEVQDENKL--FKSQVEQLNHQNHQQASFPSQEELQTVI--------------SEKEKEITDLCNELESLKNAV 1001
Cdd:TIGR01612 1387 KSEKLIKKIKDDINLeeCKSKIESTLDDKDIDECIKKIKELKNHIlseesnidtyfknaDENNENVLLLFKNIEMADNKS 1466
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1002 EH--QRKKNNDLREKNWEAMEAlasteKILQDRVNKTSKERQQQVEAVElESKDLLKRLFPAVSVPSHSNYSEWLRSFEK 1079
Cdd:TIGR01612 1467 QHilKIKKDNATNDHDFNINEL-----KEHIDKSKGCKDEADKNAKAIE-KNKELFEQYKKDVTELLNKYSALAIKNKFA 1540
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1080 KAKacmagpSDTEAVkvlehrLKEANEMHTLLQLECEKYKSVLAEtegiLQKLQRSVEQEESkwkvKAEESRRTIQQMQS 1159
Cdd:TIGR01612 1541 KTK------KDSEII------IKEIKDAHKKFILEAEKSEQKIKE----IKKEKFRIEDDAA----KNDKSNKAAIDIQL 1600
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1160 SFTASEQELERLRHENKAMENLRREREHLEIELEKAEVErsTYVMEVRELKTQLNETHSKLQNEQTERKKVADDlhkaQQ 1239
Cdd:TIGR01612 1601 SLENFENKFLKISDIKKKINDCLKETESIEKKISSFSID--SQDTELKENGDNLNSLQEFLESLKDQKKNIEDK----KK 1674
|
....*....
gi 1958681425 1240 SLNFIHSKI 1248
Cdd:TIGR01612 1675 ELDELDSEI 1683
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
462-643 |
1.81e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.12 E-value: 1.81e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 462 SELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQskfvAKENEVQSLHSKLTDT 541
Cdd:COG3883 16 PQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIA----EAEAEIEERREELGER 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 542 LVSKQQ---LEQRLMQLMESEQ-----KRASQEESMQIQVQDILEQNEALKAQIQQFHSQI--------AAQTSASVLAE 605
Cdd:COG3883 92 ARALYRsggSVSYLDVLLGSESfsdflDRLSALSKIADADADLLEELKADKAELEAKKAELeaklaeleALKAELEAAKA 171
|
170 180 190
....*....|....*....|....*....|....*...
gi 1958681425 606 ELHKVIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQ 643
Cdd:COG3883 172 ELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAE 209
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
508-729 |
1.92e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 1.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 508 KRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQI 587
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 588 QQFHSQIAAQTSASVLAEELHKV--------IAEKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQAL 659
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLalllspedFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAELEAL 179
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 660 AKEQAAAAHEVEKMQKSVhvkddkiRLLEEQLQREVASRVEELKILNDQNKALQLEVQKLQAVVSEQPNK 729
Cdd:COG4942 180 LAELEEERAALEALKAER-------QKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
908-1207 |
1.98e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 42.42 E-value: 1.98e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 908 FEELENVLKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQEELQTVISEKEKEI 987
Cdd:pfam17380 336 YAEQERMAMERERELERIRQEERKRELERIRQEEIAMEISRMRELERLQMERQQKNERVRQELEAARKVKILEEERQRKI 415
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 988 TDLCNELESLKNAVEHQRKknndlreknwEAMEALASTEKILQDRVNKTSKERQQQVEAVELESKDLLKRLFpavsvpsh 1067
Cdd:pfam17380 416 QQQKVEMEQIRAEQEEARQ----------REVRRLEEERAREMERVRLEEQERQQQVERLRQQEEERKRKKL-------- 477
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1068 snysEWLRSFEKKAKAcmagpsDTEAVKVLEHRLKEANEM-------HTLLQLECEKYKSVLAETEgilqklQRSVEQEE 1140
Cdd:pfam17380 478 ----ELEKEKRDRKRA------EEQRRKILEKELEERKQAmieeerkRKLLEKEMEERQKAIYEEE------RRREAEEE 541
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958681425 1141 SKWKVKAEESRRTIQQMQSSfTASEQELERLRHENKAMenlrreREHLEIELEKAEVERSTYVMEVR 1207
Cdd:pfam17380 542 RRKQQEMEERRRIQEQMRKA-TEERSRLEAMEREREMM------RQIVESEKARAEYEATTPITTIK 601
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
544-787 |
2.26e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 2.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 544 SKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSAsvlAEELHKVIAEKDKQLKQTED 623
Cdd:COG4942 21 AAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQE---LAALEAELAELEKEIAELRA 97
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 624 SLASEQDHLAS---KEQELKDVQNVNFLLKAEvqklqalakeqaaaahEVEKMQKSVHVkddkIRLLEEQLQREVASRVE 700
Cdd:COG4942 98 ELEAQKEELAEllrALYRLGRQPPLALLLSPE----------------DFLDAVRRLQY----LKYLAPARREQAEELRA 157
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 701 ELKILNDQNKALQLEVQKLQAVVSEQpnKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKE 780
Cdd:COG4942 158 DLAELAALRAELEAERAELEALLAEL--EEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAE 235
|
....*..
gi 1958681425 781 VQELKAK 787
Cdd:COG4942 236 AAAAAER 242
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
386-1017 |
2.49e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 42.40 E-value: 2.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 386 EKEHNIFQNKMHVSYQET--QQMQMKFEQVREQMEAEIAHLK---QENGILRDAVS--NTTNQLESKQSAELNKLRQDCG 458
Cdd:pfam05483 103 QKENKLQENRKIIEAQRKaiQELQFENEKVSLKLEEEIQENKdliKENNATRHLCNllKETCARSAEKTKKYEYEREETR 182
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 459 RLVSELNEKTGKLQQEGVQ-KKNAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSK 537
Cdd:pfam05483 183 QVYMDLNNNIEKMILAFEElRVQAENARLEMHFKLKEDHEKIQHLEEEYKKEINDKEKQVSLLLIQITEKENKMKDLTFL 262
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 538 LTDTLVSKQQLEQR-------LMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQT-SASVLAEELHK 609
Cdd:pfam05483 263 LEESRDKANQLEEKtklqdenLKELIEKKDHLTKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTeEKEAQMEELNK 342
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 610 VIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAH--EVEKMQKSVHVKDDKIRLL 687
Cdd:pfam05483 343 AKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELEEMTKFKNnkEVELEELKKILAEDEKLLD 422
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 688 E----EQLQREVASRVEELKIL--NDQNKALQLEVQKLQAVVSEQPNKDVVEQMKKciQEKDEKLRTVEELLETGLIQVA 761
Cdd:pfam05483 423 EkkqfEKIAEELKGKEQELIFLlqAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKT--ELEKEKLKNIELTAHCDKLLLE 500
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 762 TRE----------------EELNAIRTENSSLTKEVQELKAKQM---DQVAYVLVPFVSLIEDLK--------------K 808
Cdd:pfam05483 501 NKEltqeasdmtlelkkhqEDIINCKKQEERMLKQIENLEEKEMnlrDELESVREEFIQKGDEVKckldkseenarsieY 580
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 809 VIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEE-IGNAQLEKAHQLSVTSQVQELQNLLRGKEEQVDSMK 887
Cdd:pfam05483 581 EVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKgSAENKQLNAYEIKVNKLELELASAKQKFEEIIDNYQ 660
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 888 AALEDltgrekcTQVCSTPRFEELENVLKEKDNEIKRIEAILKDTKsdlSKKAELLKEVQDENKLFKSQVEQlnhQNHQQ 967
Cdd:pfam05483 661 KEIED-------KKISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQ---HKIAEMVALMEKHKHQYDKIIEE---RDSEL 727
|
650 660 670 680 690
....*....|....*....|....*....|....*....|....*....|.
gi 1958681425 968 ASFPSQEELQTVISEK-EKEITDLCNELESLKNAVEHQRKKNNDLREKNWE 1017
Cdd:pfam05483 728 GLYKNKEQEQSSAKAAlEIELSNIKAELLSLKKQLEIEKEEKEKLKMEAKE 778
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
477-596 |
2.96e-03 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 41.57 E-value: 2.96e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 477 QKKNAEQAAAQLKVQLQEAERRwEEVQSYIRKRTAEHEAAQQDLQskfvAKENEVQSLHSKLTDTLVSKQQLEQRLMQLM 556
Cdd:COG1566 84 ALAQAEAQLAAAEAQLARLEAE-LGAEAEIAAAEAQLAAAQAQLD----LAQRELERYQALYKKGAVSQQELDEARAALD 158
|
90 100 110 120
....*....|....*....|....*....|....*....|..
gi 1958681425 557 ESEQKRASQEESMQIQVQDILEQNE--ALKAQIQQFHSQIAA 596
Cdd:COG1566 159 AAQAQLEAAQAQLAQAQAGLREEEElaAAQAQVAQAEAALAQ 200
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
455-1302 |
3.14e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 42.03 E-value: 3.14e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 455 QDCGRLVSELNEKTGKlqqegvQKKNAEQAAAQLKVQLQEAERRwEEVQSYIRKRTAEheaAQQDLQSKFVAKENEVQSL 534
Cdd:pfam15921 88 KDLQRRLNESNELHEK------QKFYLRQSVIDLQTKLQEMQME-RDAMADIRRRESQ---SQEDLRNQLQNTVHELEAA 157
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 535 HSKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQvqdiLEQNEALKAQIQQFHSQIAAQTSASVLAeelhKVIAEK 614
Cdd:pfam15921 158 KCLKEDMLEDSNTQIEQLRKMMLSHEGVLQEIRSILVD----FEEASGKKIYEHDSMSTMHFRSLGSAIS----KILREL 229
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 615 DKQLKQTEDSLASEQDHLASkeqelkdvqnvnflLKAEVQKlqalakeqaaaaheveKMQKSVHVKDDKIRLLEEQLQRE 694
Cdd:pfam15921 230 DTEISYLKGRIFPVEDQLEA--------------LKSESQN----------------KIELLLQQHQDRIEQLISEHEVE 279
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 695 VASRVEELKILNDQNKALQLEVQKLQAVVSEQPN------KDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELN 768
Cdd:pfam15921 280 ITGLTEKASSARSQANSIQSQLEIIQEQARNQNSmymrqlSDLESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELT 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 769 AIRTENSSLTKEVQELKakqmDQVAYVLVPF------VSLIEDLKKVIHEKDG----QIKSVEELLEVELLKVANKEKTV 838
Cdd:pfam15921 360 EARTERDQFSQESGNLD----DQLQKLLADLhkrekeLSLEKEQNKRLWDRDTgnsiTIDHLRRELDDRNMEVQRLEALL 435
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 839 QALKQEIEILKE------EIGNAQLEKAHqlSVTSQVQELQNLLRGKEEQVDSMKAALEDltgrekctqvcSTPRFEELE 912
Cdd:pfam15921 436 KAMKSECQGQMErqmaaiQGKNESLEKVS--SLTAQLESTKEMLRKVVEELTAKKMTLES-----------SERTVSDLT 502
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 913 NVLKEKDNEIKRIEAILKDTKSDLSKKAELLKEVQDENklfksqveqlNHQNHQQASFpsqEELQTVISEKEKEITDLCN 992
Cdd:pfam15921 503 ASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEG----------DHLRNVQTEC---EALKLQMAEKDKVIEILRQ 569
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 993 ELESLKNAV-EHQRKKNNDLREKNWEAMEA----LASTE-KILQDRVNKTSKERQQQVEAVELEskdllkrlfpavsvps 1066
Cdd:pfam15921 570 QIENMTQLVgQHGRTAGAMQVEKAQLEKEIndrrLELQEfKILKDKKDAKIRELEARVSDLELE---------------- 633
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1067 hsnysewlrsfekKAKACMAGPSDTEAVK-VLEHRLKEANEMHTllqlecekyksvlaeTEGILQKLQRSVEQEESKWKV 1145
Cdd:pfam15921 634 -------------KVKLVNAGSERLRAVKdIKQERDQLLNEVKT---------------SRNELNSLSEDYEVLKRNFRN 685
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1146 KAEESRRTIQQMQSSFTASEQELERLRHENKAMENLRREREHLEIELEKAEVERSTyvmEVRELKTQLNETHSKLQNEQT 1225
Cdd:pfam15921 686 KSEEMETTTNKLKMQLKSAQSELEQTRNTLKSMEGSDGHAMKVAMGMQKQITAKRG---QIDALQSKIQFLEEAMTNANK 762
|
810 820 830 840 850 860 870
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958681425 1226 ERKKVADDLHKAQQSLNFIHSKISlKAAGDTVVIENNDISPEMGSPEKETMSVSLTQTVAHLQQLLQEVNQQLTKEK 1302
Cdd:pfam15921 763 EKHFLKEEKNKLSQELSTVATEKN-KMAGELEVLRSQERRLKEKVANMEVALDKASLQFAECQDIIQRQEQESVRLK 838
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
426-860 |
4.04e-03 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 41.21 E-value: 4.04e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 426 QENGILRDAVSNTTNQLEskqsaELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAAQLKVQLQEAERrweevqsy 505
Cdd:pfam19220 3 QRNELLRVRLGEMADRLE-----DLRSLKADFSQLIEPIEAILRELPQAKSRLLELEALLAQERAAYGKLRR-------- 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 506 irkrtaeheaaqqdlqskfvakenEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKA 585
Cdd:pfam19220 70 ------------------------ELAGLTRRLSAAEGELEELVARLAKLEAALREAEAAKEELRIELRDKTAQAEALER 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 586 QIQQFHSQIAAqtsasvLAEELhkviAEKDKQLKQTEDSLASeqdhlasKEQELKDVQNVNFLLKAEVQKLQALAKEQAA 665
Cdd:pfam19220 126 QLAAETEQNRA------LEEEN----KALREEAQAAEKALQR-------AEGELATARERLALLEQENRRLQALSEEQAA 188
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 666 AAHEVEK----MQKSVHVKDDKIRLLEEQLQREVASRVEELKILNDQNKALQLEV----QKLQAVVSEQPNKDVV-EQMK 736
Cdd:pfam19220 189 ELAELTRrlaeLETQLDATRARLRALEGQLAAEQAERERAEAQLEEAVEAHRAERaslrMKLEALTARAAATEQLlAEAR 268
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 737 KCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKQMDQVAYVlvpfvsliEDLKKVIHEKDGQ 816
Cdd:pfam19220 269 NQLRDRDEAIRAAERRLKEASIERDTLERRLAGLEADLERRTQQFQEMQRARAELEERA--------EMLTKALAAKDAA 340
|
410 420 430 440
....*....|....*....|....*....|....*....|....*...
gi 1958681425 817 IKSVEELLEVELLKVANKEKTV----QALKQEIEILKEEIGNAQLEKA 860
Cdd:pfam19220 341 LERAEERIASLSDRIAELTKRFeverAALEQANRRLKEELQRERAERA 388
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
746-1240 |
4.21e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 41.67 E-value: 4.21e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 746 LRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKQMDQV--AYVLVPFVSLIEDLKKVIHEKDGQIKSVEEL 823
Cdd:PTZ00121 1026 IEKIEELTEYGNNDDVLKEKDIIDEDIDGNHEGKAEAKAHVGQDEGLkpSYKDFDFDAKEDNRADEATEEAFGKAEEAKK 1105
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 824 LEVELLKVANKEKTVQALKQEIEILKEEIGNAQLEKAHQLSVTSQVQELQNLLRGKEEQVDSMKAALEDLTGREKCTQVC 903
Cdd:PTZ00121 1106 TETGKAEEARKAEEAKKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEARKAEDAKKAEAARKAE 1185
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 904 STPRFEEL---ENVLK----EKDNEIKRIEAILK---DTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQASFPSQ 973
Cdd:PTZ00121 1186 EVRKAEELrkaEDARKaeaaRKAEEERKAEEARKaedAKKAEAVKKAEEAKKDAEEAKKAEEERNNEEIRKFEEARMAHF 1265
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 974 EELQTVISEKEKEITDLCNELESLKNAVE----HQRKKNNDLREKNWEAMEAlastekilqDRVNKTSKERQQQVEAVEL 1049
Cdd:PTZ00121 1266 ARRQAAIKAEEARKADELKKAEEKKKADEakkaEEKKKADEAKKKAEEAKKA---------DEAKKKAEEAKKKADAAKK 1336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1050 ESKDLLKRlfPAVSVPSHSNYSEWLRSFEKKAKAcmAGPSDTEAVKVLEHRLKEANEMHTLLQLEcEKYKSVLAETEGIL 1129
Cdd:PTZ00121 1337 KAEEAKKA--AEAAKAEAEAAADEAEAAEEKAEA--AEKKKEEAKKKADAAKKKAEEKKKADEAK-KKAEEDKKKADELK 1411
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1130 QKLQRSVEQEESKWKV----KAEESRRTIQQMQSSftaseQELERLRHENKAMENLRREREhleiELEKAE--VERSTYV 1203
Cdd:PTZ00121 1412 KAAAAKKKADEAKKKAeekkKADEAKKKAEEAKKA-----DEAKKKAEEAKKAEEAKKKAE----EAKKADeaKKKAEEA 1482
|
490 500 510
....*....|....*....|....*....|....*....
gi 1958681425 1204 MEVRELKTQLNETHSKLQN--EQTERKKVADDLHKAQQS 1240
Cdd:PTZ00121 1483 KKADEAKKKAEEAKKKADEakKAAEAKKKADEAKKAEEA 1521
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
610-1242 |
4.43e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 41.54 E-value: 4.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 610 VIAEKDKQLKQTEDSLASEQDHLASKEQELKDVQNvNFLLKAEVQKlqalakEQAAAAHEVEKMQKSVHVKDDKIRLLEE 689
Cdd:TIGR04523 27 IANKQDTEEKQLEKKLKTIKNELKNKEKELKNLDK-NLNKDEEKIN------NSNNKIKILEQQIKDLNDKLKKNKDKIN 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 690 QLQREVASRVEELKILNDQNKALQLEVQKLqavvseqpnkdvveqmKKCIQEKDEKLRTVeelletgLIQVATREEELNA 769
Cdd:TIGR04523 100 KLNSDLSKINSEIKNDKEQKNKLEVELNKL----------------EKQKKENKKNIDKF-------LTEIKKKEKELEK 156
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 770 IRTENSSLTKEVQELKaKQMDQVAYVLVPFVSLIEDLKK----------VIHEKDGQIKSVEELLEVELLKVANKEKTVQ 839
Cdd:TIGR04523 157 LNNKYNDLKKQKEELE-NELNLLEKEKLNIQKNIDKIKNkllklelllsNLKKKIQKNKSLESQISELKKQNNQLKDNIE 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 840 ALKQEIEILKEEIGNAQlekaHQLSVTSQVQ-ELQNLLRGKEEQVDSMKAALEDLTGREKCTQV-CSTPRFEELENVLKE 917
Cdd:TIGR04523 236 KKQQEINEKTTEISNTQ----TQLNQLKDEQnKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSeISDLNNQKEQDWNKE 311
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 918 KDNEIKRIEAILKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNhqqasfpsqEELQTVISEKEKEITDLCNELESL 997
Cdd:TIGR04523 312 LKSELKNQEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESEN---------SEKQRELEEKQNEIEKLKKENQSY 382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 998 KNAVEHQRKKNNDLREKnweamealastekilQDRVNKTSKERQQQVEAVELESKDLLKRLfpavsvpshsnysEWLRSF 1077
Cdd:TIGR04523 383 KQEIKNLESQINDLESK---------------IQNQEKLNQQKDEQIKKLQQEKELLEKEI-------------ERLKET 434
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1078 EKKAKACMAGPSDTEAVKVLEhrLKEANEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEES------KWKVKAEESR 1151
Cdd:TIGR04523 435 IIKNNSEIKDLTNQDSVKELI--IKNLDNTRESLETQLKVLSRSINKIKQNLEQKQKELKSKEKelkklnEEKKELEEKV 512
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 1152 RTIQQMQSSFTASEQELERLRHE-NKAMENLRREREHLEIELEKAEVERStyVMEVRELKTQLNETHSKLQNEQTERKKV 1230
Cdd:TIGR04523 513 KDLTKKISSLKEKIEKLESEKKEkESKISDLEDELNKDDFELKKENLEKE--IDEKNKEIEELKQTQKSLKKKQEEKQEL 590
|
650
....*....|..
gi 1958681425 1231 ADDLHKAQQSLN 1242
Cdd:TIGR04523 591 IDQKEKEKKDLI 602
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
867-1057 |
5.18e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 39.91 E-value: 5.18e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 867 SQVQELQNLLRGKEEQVDSMKAALEDLTGRekctqvcstprFEELENVLKEKDNEIKRIEAILKDTKSDLSKKAELLKEV 946
Cdd:COG1579 17 SELDRLEHRLKELPAELAELEDELAALEAR-----------LEAAKTELEDLEKEIKRLELEIEEVEARIKKYEEQLGNV 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 947 QDENklfksQVEQLNHQnhqqasfpsQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNDLREKNWEAMEALASTE 1026
Cdd:COG1579 86 RNNK-----EYEALQKE---------IESLKRRISDLEDEILELMERIEELEEELAELEAELAELEAELEEKKAELDEEL 151
|
170 180 190
....*....|....*....|....*....|.
gi 1958681425 1027 KILQDRVNKTSKERQQQVEAVElesKDLLKR 1057
Cdd:COG1579 152 AELEAELEELEAEREELAAKIP---PELLAL 179
|
|
| COG4372 |
COG4372 |
Uncharacterized protein, contains DUF3084 domain [Function unknown]; |
545-858 |
5.83e-03 |
|
Uncharacterized protein, contains DUF3084 domain [Function unknown];
Pssm-ID: 443500 [Multi-domain] Cd Length: 370 Bit Score: 40.66 E-value: 5.83e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 545 KQQLEQRLMQLMESEQKRASQEESMQIQVQDILEQNEALKAQIQQFHSQIAAQTSAsvlaeelhkvIAEKDKQLKQTEDS 624
Cdd:COG4372 5 GEKVGKARLSLFGLRPKTGILIAALSEQLRKALFELDKLQEELEQLREELEQAREE----------LEQLEEELEQARSE 74
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 625 LASEQDHLASKEQELKDVQNVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQREVASRVEELKI 704
Cdd:COG4372 75 LEQLEEELEELNEQLQAAQAELAQAQEELESLQEEAEELQEELEELQKERQDLEQQRKQLEAQIAELQSEIAEREEELKE 154
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 705 LNDQNKALQLEVQKLQAVVSEQPNKDVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQEL 784
Cdd:COG4372 155 LEEQLESLQEELAALEQELQALSEAEAEQALDELLKEANRNAEKEEELAEAEKLIESLPRELAEELLEAKDSLEAKLGLA 234
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958681425 785 KAKQMDQVAYVLVPFVSLIEDLKKVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQLE 858
Cdd:COG4372 235 LSALLDALELEEDKEELLEEVILKEIEELELAILVEKDTEEEELEIAALELEALEEAALELKLLALLLNLAALS 308
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
332-1056 |
6.49e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 41.11 E-value: 6.49e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 332 LLHQLQEKERLLTATKEDAAATKERCKQLTQEMMTEKErssvvmarmkerigTLEKEHNIFQNKMHVSyQETQQMQMKFE 411
Cdd:pfam02463 228 YLDYLKLNEERIDLLQELLRDEQEEIESSKQEIEKEEE--------------KLAQVLKENKEEEKEK-KLQEEELKLLA 292
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 412 QVREQMEAEIAHLKQENGILRDAVSNTTNQLESKQSaELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQaaaqlkvQ 491
Cdd:pfam02463 293 KEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEK-ELKKEKEEIEELEKELKELEIKREAEEEEEEELEK-------L 364
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 492 LQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTdtlVSKQQLEQRLMQLMESEQKRASQEESMQI 571
Cdd:pfam02463 365 QEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLE---LARQLEDLLKEEKKEELEILEEEEESIEL 441
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 572 QVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIaekdKQLKQTEDSLASEQDHLASKEQELKDVQNVNFLLKA 651
Cdd:pfam02463 442 KQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVK----LQEQLELLLSRQKLEERSQKESKARSGLKVLLALIK 517
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 652 EVQKLQALAKEQAAAAHEVEKMQKSVHvKDDKIRLLEEQLQREVASRVEELKILNDQNKALQLEVQKLQAVVSE--QPNK 729
Cdd:pfam02463 518 DGVGGRIISAHGRLGDLGVAVENYKVA-ISTAVIVEVSATADEVEERQKLVRALTELPLGARKLRLLIPKLKLPlkSIAV 596
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 730 DVVEQMKKCIQEKDEKLRTVEELLETGLIQVATREEELNAIRTENSSLTKEVQELKAKQMDQVAYVLVPFVSLIEDLKKV 809
Cdd:pfam02463 597 LEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELL 676
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 810 IHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEILKEEIGNAQLEKAHQLSVTSQVQELQNLLRGKEEQVDSMKAA 889
Cdd:pfam02463 677 EIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSR 756
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 890 LEDLTGREKCTQVCSTPRFEELENVLKEKDNEIKRIEailKDTKSDLSKKAELLKEVQDENKLFKSQVEQLNHQNHQQAS 969
Cdd:pfam02463 757 LKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKE---EKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEE 833
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 970 FPSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNDLREKNWEAMEALASTEKILQDRVNKTSKERQQQVEAVEL 1049
Cdd:pfam02463 834 ELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLE 913
|
....*..
gi 1958681425 1050 ESKDLLK 1056
Cdd:pfam02463 914 EKENEIE 920
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
323-528 |
7.38e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 40.87 E-value: 7.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 323 KSNKGELSGLLHQLQEKERLLTATKEDAAATKERCKQLTQEMMTEKERssvVMARMKERIGTLEKEHNIFQNkMHVSYQE 402
Cdd:pfam15921 649 KDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNK---LKMQLKSAQSELEQTRNTLKS-MEGSDGH 724
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 403 TQQMQMKFEQVREQMEAEIAHLKQENGILRDAVSNTtNQLESKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAE 482
Cdd:pfam15921 725 AMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNA-NKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLK 803
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1958681425 483 QAAAQLKVQLQEAERRWEEVQSYIRKRtaEHEAAQQDLQSKFVAKE 528
Cdd:pfam15921 804 EKVANMEVALDKASLQFAECQDIIQRQ--EQESVRLKLQHTLDVKE 847
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
480-693 |
7.43e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.67 E-value: 7.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 480 NAEQAAAQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQ-----SKFVAKENEVQSLHSKLtdtlvskQQLEQRLMQ 554
Cdd:COG4913 607 DNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREalqrlAEYSWDEIDVASAEREI-------AELEAELER 679
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 555 LmeseqkRASQEESMQIQvqdilEQNEALKAQIQQFHSQIaaqtsasvlaEELHKVIAEKDKQLKQTEDSLASEQDHLAS 634
Cdd:COG4913 680 L------DASSDDLAALE-----EQLEELEAELEELEEEL----------DELKGEIGRLEKELEQAEEELDELQDRLEA 738
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*....
gi 1958681425 635 KEQElkDVQNVNFLLKAEVQKLQALAKEQAAaaheVEKMQKSVHVKDDKIRLLEEQLQR 693
Cdd:COG4913 739 AEDL--ARLELRALLEERFAAALGDAVEREL----RENLEERIDALRARLNRAEEELER 791
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
349-643 |
8.01e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 40.71 E-value: 8.01e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 349 DAAATKERCKQLTQEMMTEKERSSVVMAR----MKERIGTLEKEHNIFQ---NKMhvsyQETQQMQMKFEQVREQMEAEI 421
Cdd:COG3096 285 ERALELRRELFGARRQLAEEQYRLVEMAReleeLSARESDLEQDYQAASdhlNLV----QTALRQQEKIERYQEDLEELT 360
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 422 AHLKQENGILRDAVSNTTNQLESKQSAElnklrQDCGRLVSELNEKTGKL---QQEGVQKKNAEQAAAQLKVQLQEAERR 498
Cdd:COG3096 361 ERLEEQEEVVEEAAEQLAEAEARLEAAE-----EEVDSLKSQLADYQQALdvqQTRAIQYQQAVQALEKARALCGLPDLT 435
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 499 WEEVQSYIrkrtAEHEAAQQDLQSkfvakenEVQSLHSKLTDTLVSKQQLEQrLMQLME--------------------- 557
Cdd:COG3096 436 PENAEDYL----AAFRAKEQQATE-------EVLELEQKLSVADAARRQFEK-AYELVCkiageversqawqtarellrr 503
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958681425 558 --SEQKRASQEESMQIQVQDI---LEQNEALKAQIQQFHSQIAAQTSAsvlAEELHKVIAEKDKQLKQTEDSLASEQDHL 632
Cdd:COG3096 504 yrSQQALAQRLQQLRAQLAELeqrLRQQQNAERLLEEFCQRIGQQLDA---AEELEELLAELEAQLEELEEQAAEAVEQR 580
|
330
....*....|.
gi 1958681425 633 ASKEQELKDVQ 643
Cdd:COG3096 581 SELRQQLEQLR 591
|
|
| |
