protein lin-9 homolog isoform X1 [Rattus norvegicus]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | |||||
| LIN9_C | pfam19438 | LIN9 C-terminal; MuvB transcriptional regulatory complex interacts with B-Myb to form the MMB ... |
248-521 | 2.61e-174 | |||||
LIN9 C-terminal; MuvB transcriptional regulatory complex interacts with B-Myb to form the MMB complex during S-phase of the cell cycle to activate genes required for the G2 and M phases. This is a domain found at the C-terminal of LIN9, one of the core members of the MuvB complex that functions as a scaffold protein and forms a subcomplex with the C-terminal of LIN152. This subcomplex forms a binding interface that recruits B-Myb to the MuvB complex which is arranged as a three-stranded antiparallel coiled-coil as the core of the structure. LIN9 contributes two helices (alpha1 and alpha2) that run antiparallel and are connected through a short linker. : Pssm-ID: 437270 Cd Length: 272 Bit Score: 491.78 E-value: 2.61e-174
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| DIRP | pfam06584 | DIRP; DIRP (Domain in Rb-related Pathway) is postulated to be involved in the Rb-related ... |
107-212 | 1.19e-62 | |||||
DIRP; DIRP (Domain in Rb-related Pathway) is postulated to be involved in the Rb-related pathway, which is encoded by multiple eukaryotic genomes and is present in proteins including lin-9 of Caenorhabditis elegans, aly of fruit fly and mustard weed. Studies of lin-9 and aly of fruit fly proteins containing DIRP suggest that this domain might be involved in development. Aly, lin-9, act in parallel to, or downstream of, activation of MAPK by the RTK-Ras signalling pathway. : Pssm-ID: 461955 Cd Length: 108 Bit Score: 200.14 E-value: 1.19e-62
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| Name | Accession | Description | Interval | E-value | |||||
| LIN9_C | pfam19438 | LIN9 C-terminal; MuvB transcriptional regulatory complex interacts with B-Myb to form the MMB ... |
248-521 | 2.61e-174 | |||||
LIN9 C-terminal; MuvB transcriptional regulatory complex interacts with B-Myb to form the MMB complex during S-phase of the cell cycle to activate genes required for the G2 and M phases. This is a domain found at the C-terminal of LIN9, one of the core members of the MuvB complex that functions as a scaffold protein and forms a subcomplex with the C-terminal of LIN152. This subcomplex forms a binding interface that recruits B-Myb to the MuvB complex which is arranged as a three-stranded antiparallel coiled-coil as the core of the structure. LIN9 contributes two helices (alpha1 and alpha2) that run antiparallel and are connected through a short linker. Pssm-ID: 437270 Cd Length: 272 Bit Score: 491.78 E-value: 2.61e-174
|
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| DIRP | pfam06584 | DIRP; DIRP (Domain in Rb-related Pathway) is postulated to be involved in the Rb-related ... |
107-212 | 1.19e-62 | |||||
DIRP; DIRP (Domain in Rb-related Pathway) is postulated to be involved in the Rb-related pathway, which is encoded by multiple eukaryotic genomes and is present in proteins including lin-9 of Caenorhabditis elegans, aly of fruit fly and mustard weed. Studies of lin-9 and aly of fruit fly proteins containing DIRP suggest that this domain might be involved in development. Aly, lin-9, act in parallel to, or downstream of, activation of MAPK by the RTK-Ras signalling pathway. Pssm-ID: 461955 Cd Length: 108 Bit Score: 200.14 E-value: 1.19e-62
|
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| Name | Accession | Description | Interval | E-value | |||||
| LIN9_C | pfam19438 | LIN9 C-terminal; MuvB transcriptional regulatory complex interacts with B-Myb to form the MMB ... |
248-521 | 2.61e-174 | |||||
LIN9 C-terminal; MuvB transcriptional regulatory complex interacts with B-Myb to form the MMB complex during S-phase of the cell cycle to activate genes required for the G2 and M phases. This is a domain found at the C-terminal of LIN9, one of the core members of the MuvB complex that functions as a scaffold protein and forms a subcomplex with the C-terminal of LIN152. This subcomplex forms a binding interface that recruits B-Myb to the MuvB complex which is arranged as a three-stranded antiparallel coiled-coil as the core of the structure. LIN9 contributes two helices (alpha1 and alpha2) that run antiparallel and are connected through a short linker. Pssm-ID: 437270 Cd Length: 272 Bit Score: 491.78 E-value: 2.61e-174
|
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| DIRP | pfam06584 | DIRP; DIRP (Domain in Rb-related Pathway) is postulated to be involved in the Rb-related ... |
107-212 | 1.19e-62 | |||||
DIRP; DIRP (Domain in Rb-related Pathway) is postulated to be involved in the Rb-related pathway, which is encoded by multiple eukaryotic genomes and is present in proteins including lin-9 of Caenorhabditis elegans, aly of fruit fly and mustard weed. Studies of lin-9 and aly of fruit fly proteins containing DIRP suggest that this domain might be involved in development. Aly, lin-9, act in parallel to, or downstream of, activation of MAPK by the RTK-Ras signalling pathway. Pssm-ID: 461955 Cd Length: 108 Bit Score: 200.14 E-value: 1.19e-62
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| Blast search parameters | ||||
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