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Conserved domains on  [gi|1958649575|ref|XP_038946534|]
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uncharacterized protein C6orf118 homolog isoform X1 [Rattus norvegicus]

Protein Classification

TSNAXIP1_N domain-containing protein( domain architecture ID 11239006)

TSNAXIP1_N domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
TSNAXIP1_N pfam15739
Translin-associated factor X-interacting N-terminus; This domain is found at the N-terminus of ...
 241-351 2.41e-38

Translin-associated factor X-interacting N-terminus; This domain is found at the N-terminus of translin-associated factor X-interacting protein, a protein which may play a role in spermatogenesis.


:

Pssm-ID: 464835 [Multi-domain]  Cd Length: 111  Bit Score: 133.11  E-value: 2.41e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958649575 241 ENRLKEELQKI-CTCNPQQFNRLQVFGEIFEDICNSSLIFGDLLKEVKDEYELYMAALLDSQPTAQYqrLLAEVKGLEKS 319
Cdd:pfam15739   1 ERKLEQELQKLgCTEDGPQELRLQVYREVFEDLIEHFTTYKPLLSEIKNEYELYIAHLLESQRELQY--LKAKLKGLSEQ 78

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1958649575 320 PVHSS-DIAQAKERLRKLQHAALAALEHNDRLR 351
Cdd:pfam15739  79 SDKRAlELEEKREEIRALEKESKALLERNDKLR 111
 
Name Accession Description Interval E-value
TSNAXIP1_N pfam15739
Translin-associated factor X-interacting N-terminus; This domain is found at the N-terminus of ...
 241-351 2.41e-38

Translin-associated factor X-interacting N-terminus; This domain is found at the N-terminus of translin-associated factor X-interacting protein, a protein which may play a role in spermatogenesis.


Pssm-ID: 464835 [Multi-domain]  Cd Length: 111  Bit Score: 133.11  E-value: 2.41e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958649575 241 ENRLKEELQKI-CTCNPQQFNRLQVFGEIFEDICNSSLIFGDLLKEVKDEYELYMAALLDSQPTAQYqrLLAEVKGLEKS 319
Cdd:pfam15739   1 ERKLEQELQKLgCTEDGPQELRLQVYREVFEDLIEHFTTYKPLLSEIKNEYELYIAHLLESQRELQY--LKAKLKGLSEQ 78

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1958649575 320 PVHSS-DIAQAKERLRKLQHAALAALEHNDRLR 351
Cdd:pfam15739  79 SDKRAlELEEKREEIRALEKESKALLERNDKLR 111
 
Name Accession Description Interval E-value
TSNAXIP1_N pfam15739
Translin-associated factor X-interacting N-terminus; This domain is found at the N-terminus of ...
 241-351 2.41e-38

Translin-associated factor X-interacting N-terminus; This domain is found at the N-terminus of translin-associated factor X-interacting protein, a protein which may play a role in spermatogenesis.


Pssm-ID: 464835 [Multi-domain]  Cd Length: 111  Bit Score: 133.11  E-value: 2.41e-38
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958649575 241 ENRLKEELQKI-CTCNPQQFNRLQVFGEIFEDICNSSLIFGDLLKEVKDEYELYMAALLDSQPTAQYqrLLAEVKGLEKS 319
Cdd:pfam15739   1 ERKLEQELQKLgCTEDGPQELRLQVYREVFEDLIEHFTTYKPLLSEIKNEYELYIAHLLESQRELQY--LKAKLKGLSEQ 78

                          90       100       110
                  ....*....|....*....|....*....|...
gi 1958649575 320 PVHSS-DIAQAKERLRKLQHAALAALEHNDRLR 351
Cdd:pfam15739  79 SDKRAlELEEKREEIRALEKESKALLERNDKLR 111
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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