|
Name |
Accession |
Description |
Interval |
E-value |
| DUF4485 |
pfam14846 |
Domain of unknown function (DUF4485); This family is found in eukaryotes, and is approximately ... |
65-150 |
2.89e-30 |
|
Domain of unknown function (DUF4485); This family is found in eukaryotes, and is approximately 90 amino acids in length.
Pssm-ID: 464345 Cd Length: 83 Bit Score: 114.29 E-value: 2.89e-30
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 65 LDAEFDHFVVDMKPFVLKLPHRSERQRCALWIRKLCEPSGTgagLMGRKNRNLYAKLLLHMLRRGVLEGPFTHRPEPGTL 144
Cdd:pfam14846 1 LDEEFLYFLLDIKPLLANLNDKEDKIRAAEWLKKLCEPTHN---LEEKKNRNDYLQLLLLMLQNGRLEGPFNKPPPPGPL 77
|
....*.
gi 1958657572 145 KVLPSY 150
Cdd:pfam14846 78 PPLPEF 83
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
635-969 |
3.82e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 77.28 E-value: 3.82e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 635 SELDKEKEDAQRKIHKFEEAL-------KEKEEQLGRVtEVQRLQAQQADAALEEFK-RQVEVTSEKvYSDMKEQMEKVE 706
Cdd:COG1196 168 SKYKERKEEAERKLEATEENLerledilGELERQLEPL-ERQAEKAERYRELKEELKeLEAELLLLK-LRELEAELEELE 245
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 707 ADLSRSKSLREKQSKEfLWQLEDARQRYEQQIVELKLEHEqEKTHLLQQHNAEKDSLVRDHEREVE---NLENQLRAANM 783
Cdd:COG1196 246 AELEELEAELEELEAE-LAELEAELEELRLELEELELELE-EAQAEEYELLAELARLEQDIARLEErrrELEERLEELEE 323
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 784 EHEnQIQESKKRDAQVIADMEAQVHKLREELINVNSHRKQQLVELGLLREEEKQRAARDHETAVKKLKAESERVKMELKK 863
Cdd:COG1196 324 ELA-ELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQL 402
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 864 THAAETEMTLEKANSRLKQIEKEYTQKLAKSSQIIAELQTTISSLKEESSRQQLAAERRLQDVIQkfEDEKQQLIRDNDQ 943
Cdd:COG1196 403 EELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAE--LLEEAALLEAALA 480
|
330 340
....*....|....*....|....*.
gi 1958657572 944 AIKALQDELETRSNQVRSAEKKLQHK 969
Cdd:COG1196 481 ELLEELAEAAARLLLLLEAEADYEGF 506
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
353-953 |
8.13e-12 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.58 E-value: 8.13e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 353 QKKHDAE------------VQKILERKNNELEELKilykkKQTETEETVRKLEKKVQIL--------IRDCQVIRETKEN 412
Cdd:COG1196 172 ERKEEAErkleateenlerLEDILGELERQLEPLE-----RQAEKAERYRELKEELKELeaellllkLRELEAELEELEA 246
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 413 QITELKKICEQSTESLNndwekKLHSAVAEMEKEKFELQKHHTETIQELLEdTNVRLSKMEGDYMVQTQstnhMIKDLEG 492
Cdd:COG1196 247 ELEELEAELEELEAELA-----ELEAELEELRLELEELELELEEAQAEEYE-LLAELARLEQDIARLEE----RRRELEE 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 493 RVQQLMGEAENSNLQRQKLTQEKLELERCYQITCSELQELKTRQNLLHTEKEHLVNDYEQNVKLLKTKYDSDINILRQEh 572
Cdd:COG1196 317 RLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAA- 395
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 573 alstsktsvviEELEQNIRQLKQQVQESELQRKQQVKDQEDKFHMEKNHLKYIYEEKVHELKSELDKEKEDAQRKIHKFE 652
Cdd:COG1196 396 -----------AELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLEL 464
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 653 EALKEKEEQLGRVTEVQRLQAQQADAALEEFKRQVEVTSEKVYSDMKEQMEKVEAD-LSRSKSLREKQSKEFLWQLEDAR 731
Cdd:COG1196 465 LAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRgLAGAVAVLIGVEAAYEAALEAAL 544
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 732 QRYEQQIVELKLEHEQEKTHLLQQHNA--------EKDSLVRDHEREVENLENQLRAANMEHENQIQESKKRDAQVIADM 803
Cdd:COG1196 545 AAALQNIVVEDDEVAAAAIEYLKAAKAgratflplDKIRARAALAAALARGAIGAAVDLVASDLREADARYYVLGDTLLG 624
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 804 EAQVHKLREELINVNSHRKQQLVELGLLREEEKQRAARDHETAVKKLKAESERVKMELKKTHAAEtEMTLEKANSRLKQI 883
Cdd:COG1196 625 RTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLA-EEELELEEALLAEE 703
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 884 EKEYTQKLAKSSQIIAELQttiSSLKEESSRQQLAAERRLQDVIQKFEDEKQQLIRDNDQAIKALQDELE 953
Cdd:COG1196 704 EEERELAEAEEERLEEELE---EEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELE 770
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
630-967 |
1.58e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 68.81 E-value: 1.58e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 630 VHELKSELD---KEKEDAQR-KIHKFEEALKEKEEQLGRVTEVQRlQAQQADAALEEFKRQVEVTsekvysdmKEQMEKV 705
Cdd:COG1196 195 LGELERQLEpleRQAEKAERyRELKEELKELEAELLLLKLRELEA-ELEELEAELEELEAELEEL--------EAELAEL 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 706 EADLSRSKSLREKQSKEflwqLEDARQRYEQQIVELkLEHEQEKTHLLQQHNAEKDSLVRDhEREVENLENQLRAANmEH 785
Cdd:COG1196 266 EAELEELRLELEELELE----LEEAQAEEYELLAEL-ARLEQDIARLEERRRELEERLEEL-EEELAELEEELEELE-EE 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 786 ENQIQESKKRDAQVIADMEAQVHKLREELINVNSHRKQQLVELGLLREEEKQRAARDHETAVKKLKAESERVKMELKKTH 865
Cdd:COG1196 339 LEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLER 418
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 866 AAETEMTLEKANSRLKQIEKEYTQKLAKSSQIIAELQTTISSLKEESSRQQLAAERRLQDVIQKfeDEKQQLIRDNDQAI 945
Cdd:COG1196 419 LEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAALLEAALAEL--LEELAEAAARLLLL 496
|
330 340
....*....|....*....|..
gi 1958657572 946 KALQDELETRSNQVRSAEKKLQ 967
Cdd:COG1196 497 LEAEADYEGFLEGVKAALLLAG 518
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
323-1014 |
2.29e-11 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 68.16 E-value: 2.29e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 323 DHFLSRMHEKELDMKTKMMEAKFSEEKLKLQKKHDAEVQKILERKNNELEELKILYKKKQTETEETVRKLEKKVQILird 402
Cdd:TIGR02168 273 RLEVSELEEEIEELQKELYALANEISRLEQQKQILRERLANLERQLEELEAQLEELESKLDELAEELAELEEKLEEL--- 349
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 403 cQVIRETKENQITELKKICEQStESLNNDWEKKL---HSAVAEMEKEKfELQKHHTETIQELLEDTNVRLSKMEGDYMVQ 479
Cdd:TIGR02168 350 -KEELESLEAELEELEAELEEL-ESRLEELEEQLetlRSKVAQLELQI-ASLNNEIERLEARLERLEDRRERLQQEIEEL 426
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 480 TQS-TNHMIKDLEGRV-------QQLMGEAENSNLQRQKLTQEKLELERCYQITCSELQELKTRQNLLHTEKEHL--VND 549
Cdd:TIGR02168 427 LKKlEEAELKELQAELeeleeelEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLegFSE 506
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 550 YEQNVKLLKTKYDSDINILRQ------------EHALSTSKTSVVIEELEQNIRQLKQQVQESELQRKQQVKDQEDKFHM 617
Cdd:TIGR02168 507 GVKALLKNQSGLSGILGVLSElisvdegyeaaiEAALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEI 586
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 618 EKNHLKYI-YEEKVHELKSELDKEKEDAQRKIHKFeealkekeeqLGRVTEVQRLQAQQADAALEEFK-RQVEVTSEKVY 695
Cdd:TIGR02168 587 QGNDREILkNIEGFLGVAKDLVKFDPKLRKALSYL----------LGGVLVVDDLDNALELAKKLRPGyRIVTLDGDLVR 656
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 696 SD---MKEQMEKVEADLSRSKSLRE-----KQSKEFLWQLEDARQRYEQQIVELKLEHEQ---EKTHLLQQHNAEKDSLV 764
Cdd:TIGR02168 657 PGgviTGGSAKTNSSILERRREIEEleekiEELEEKIAELEKALAELRKELEELEEELEQlrkELEELSRQISALRKDLA 736
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 765 RdHEREVENLENQLRAANMEHENQIQESKKRDAQvIADMEAQVHKLREELINVNSHRKQQLVELGLLREE--EKQRAARD 842
Cdd:TIGR02168 737 R-LEAEVEQLEERIAQLSKELTELEAEIEELEER-LEEAEEELAEAEAEIEELEAQIEQLKEELKALREAldELRAELTL 814
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 843 HETAVKKLKaesERVKMELKKTHAAETEMT-LEKANSRLKQIEKEYTQKLAKSSQIIAELQTTISSLKEESSRQQLAAER 921
Cdd:TIGR02168 815 LNEEAANLR---ERLESLERRIAATERRLEdLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALAL 891
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 922 RLQDVIQKfeDEKQQLIRDNDQAIKALQDELETRSNQVRSAEKKLQHKELEAQEQmmyIRQEYETKFKGLMP-----ASL 996
Cdd:TIGR02168 892 LRSELEEL--SEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQER---LSEEYSLTLEEAEAlenkiEDD 966
|
730
....*....|....*...
gi 1958657572 997 RQELEDTISSLKSQVNFL 1014
Cdd:TIGR02168 967 EEEARRRLKRLENKIKEL 984
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
279-1012 |
7.27e-11 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 66.53 E-value: 7.27e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 279 SDIEVRLNSWNLGIENPRYLRQKPLPVSLMTPKVSLRNSS-----------------------NLHDDHFLSRMHEKELD 335
Cdd:pfam02463 119 KEVAELLESQGISPEAYNFLVQGGKIEIIAMMKPERRLEIeeeaagsrlkrkkkealkklieeTENLAELIIDLEELKLQ 198
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 336 MKTKMMEAKFSEEKLKLQKKHDAEVQKIL-ERKNNELEELKILYKKKQTETEEtvrKLEKKVQILIRDCQVIRETKENQI 414
Cdd:pfam02463 199 ELKLKEQAKKALEYYQLKEKLELEEEYLLyLDYLKLNEERIDLLQELLRDEQE---EIESSKQEIEKEEEKLAQVLKENK 275
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 415 TELKKICEQSTESLnndwEKKLHSAVAEMEKEKFELQKHHTETIQELLEDTNVRLSKMEGDYMVQTQSTNHMIKDLEGRV 494
Cdd:pfam02463 276 EEEKEKKLQEEELK----LLAKEEEELKSELLKLERRKVDDEEKLKESEKEKKKAEKELKKEKEEIEELEKELKELEIKR 351
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 495 QQLMGEAENSNLQRQKLTQEKLELERCYQITCSELQELKTRQNLLHTEKEHLVNDYEQNVKLLKTKYDSDINILRQEHA- 573
Cdd:pfam02463 352 EAEEEEEEELEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKSEEEKEAQLLLELARQLEDLLKEEKKEELEi 431
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 574 LSTSKTSVVIEELEQNIRQLKQQVQESELQRKQQVKDQ-EDKFHMEKNHLKYIY-EEKVHELKSELDKEKEDAQRKIHKF 651
Cdd:pfam02463 432 LEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKsEDLLKETQLVKLQEQlELLLSRQKLEERSQKESKARSGLKV 511
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 652 EEALKEKEEQLGRVTEVQRLQAQQADAALEEFKRQVEVTSEKVYS-DMKEQMEKVEADLSRSKSLREKQSKEFLWQLEDA 730
Cdd:pfam02463 512 LLALIKDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEVSATaDEVEERQKLVRALTELPLGARKLRLLIPKLKLPL 591
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 731 RQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSLVRDHEREVENLENQLRAANMEHENQIQESKKRDAQVIADMEAQVHKL 810
Cdd:pfam02463 592 KSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSEL 671
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 811 REELINVnshRKQQLVELGLLREEEKQRAARDHETAVKKLKAESERVKMELKKTHAAETEMTLEKANSRLKQIEKEYTQK 890
Cdd:pfam02463 672 TKELLEI---QELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEE 748
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 891 LAKSSQIIAELQTTISSLKEESSRQQLAAERRLQDVIQKFEDEKQQLIRDNDQAIKALQDELETRSNQVRSAEKKLQHKE 970
Cdd:pfam02463 749 EEEEEKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEE 828
|
730 740 750 760
....*....|....*....|....*....|....*....|..
gi 1958657572 971 LEAQEQMMYIRQEYETKFKGLMPASLRQELEDTISSLKSQVN 1012
Cdd:pfam02463 829 KIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQ 870
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
582-955 |
8.29e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 66.50 E-value: 8.29e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 582 VIEELEQNIRQLKQQVQESElqRKQQVKDQEDKFHMEKNHLKYiyeEKVHELKSELDKEKEDAQRKIHKFEEALKEKEEQ 661
Cdd:COG1196 194 ILGELERQLEPLERQAEKAE--RYRELKEELKELEAELLLLKL---RELEAELEELEAELEELEAELEELEAELAELEAE 268
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 662 LgrvtEVQRLQAQQADAALEEFKRQVEVTSEKVysDMKEQMEKVEADLSRSKSLREKQSKEFLWQLEDARQRYEQQIVEL 741
Cdd:COG1196 269 L----EELRLELEELELELEEAQAEEYELLAEL--ARLEQDIARLEERRRELEERLEELEEELAELEEELEELEEELEEL 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 742 KLEH---EQEKTHLLQQHNAEKDSLVRDHEREVENLE--NQLRAANMEHENQIQESKKRDAQVIADMEAQVHKLREELIN 816
Cdd:COG1196 343 EEELeeaEEELEEAEAELAEAEEALLEAEAELAEAEEelEELAEELLEALRAAAELAAQLEELEEAEEALLERLERLEEE 422
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 817 VNSHRKQQL----VELGLLREEEKQRAAR---DHETAVKKLKAESERVKMELKKTHAAETEMTLEKANSRLKQIEKEYTQ 889
Cdd:COG1196 423 LEELEEALAeleeEEEEEEEALEEAAEEEaelEEEEEALLELLAELLEEAALLEAALAELLEELAEAAARLLLLLEAEAD 502
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958657572 890 KLAKSSQIIAELQTTISSLKEESSRQQLAAERRLQDVIQKFEDEK-QQLIRDNDQAIKALQDELETR 955
Cdd:COG1196 503 YEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAAlQNIVVEDDEVAAAAIEYLKAA 569
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
344-1031 |
2.00e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 65.08 E-value: 2.00e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 344 KFSEEKLKLQKKHDaEVQKILERKNNELEELKILYKKKQTETEETVRKLEKKVQI----------LIRDCQVIRETKENQ 413
Cdd:TIGR02168 169 KYKERRKETERKLE-RTRENLDRLEDILNELERQLKSLERQAEKAERYKELKAELrelelallvlRLEELREELEELQEE 247
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 414 ITELKKICEQSTESLNndwekKLHSAVAEMEKEKFELQKHHTEtIQELLEDTNVRLSKMEGDYMVQTQSTNHMIKDLEgr 493
Cdd:TIGR02168 248 LKEAEEELEELTAELQ-----ELEEKLEELRLEVSELEEEIEE-LQKELYALANEISRLEQQKQILRERLANLERQLE-- 319
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 494 vqqlMGEAENSNLQRQKLTQEKLELERCYQITcsELQELKTRQNLLHTEKEHLVNDYEQNVKLLKTKYD---SDINILRQ 570
Cdd:TIGR02168 320 ----ELEAQLEELESKLDELAEELAELEEKLE--ELKEELESLEAELEELEAELEELESRLEELEEQLEtlrSKVAQLEL 393
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 571 EHALSTSKTSVVIEELEQNIRQLKQQVQESELQRKQQVKDQEDKFHMEKNHLKYIYEEKVHELkSELDKEKEDAQRKIHK 650
Cdd:TIGR02168 394 QIASLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELQEEL-ERLEEALEELREELEE 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 651 FEEALKEKEEQL----GRVTEVQRLQAQQAD---------AALEEFKRQVEVTSEKVYSDMKEQ---------------M 702
Cdd:TIGR02168 473 AEQALDAAERELaqlqARLDSLERLQENLEGfsegvkallKNQSGLSGILGVLSELISVDEGYEaaieaalggrlqavvV 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 703 EKVEADLSRSKSLREKQSKEFLWQLEDARQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSLVR-------DHEREVENLE 775
Cdd:TIGR02168 553 ENLNAAKKAIAFLKQNELGRVTFLPLDSIKGTEIQGNDREILKNIEGFLGVAKDLVKFDPKLRkalsyllGGVLVVDDLD 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 776 NQLRAANMEH--------------------------ENQIQESKKRDAQV---IADMEAQVHKLREELINVNS--HRKQQ 824
Cdd:TIGR02168 633 NALELAKKLRpgyrivtldgdlvrpggvitggsaktNSSILERRREIEELeekIEELEEKIAELEKALAELRKelEELEE 712
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 825 LVELGLLREEEKQRAARDHETAVKKLKAESERVKMELKKTHAAETEMT---------LEKANSRLKQIEKE--------- 886
Cdd:TIGR02168 713 ELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEaeieeleerLEEAEEELAEAEAEieeleaqie 792
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 887 -YTQKLAKSSQIIAELQTTISSLKEESSRQQLAA---ERRLQDVIQKFEDEKQQlIRDNDQAIKALQDELETRSNQVRSA 962
Cdd:TIGR02168 793 qLKEELKALREALDELRAELTLLNEEAANLRERLeslERRIAATERRLEDLEEQ-IEELSEDIESLAAEIEELEELIEEL 871
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958657572 963 EKKLQHKELE---AQEQMMYIRQEYETKFKGLMPASL-RQELEDTISSLKSQVNFLQKRASILQEELTTYQSR 1031
Cdd:TIGR02168 872 ESELEALLNErasLEEALALLRSELEELSEELRELESkRSELRRELEELREKLAQLELRLEGLEVRIDNLQER 944
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
332-967 |
2.17e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 65.08 E-value: 2.17e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 332 KELDMKTKMMEAKFSEEKLKLQKKHdaEVQKILERKNNELEELKILYKKKQTETEETVRKLEKKVQILIRDCQVIRETKE 411
Cdd:TIGR02168 340 AELEEKLEELKEELESLEAELEELE--AELEELESRLEELEEQLETLRSKVAQLELQIASLNNEIERLEARLERLEDRRE 417
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 412 NQITELkkicEQSTESLNNDWEKKLHSAVAEMEKEKFELQKHHTETIQEL-----LEDTNVRLSKMEGDYMVQTQSTNHM 486
Cdd:TIGR02168 418 RLQQEI----EELLKKLEEAELKELQAELEELEEELEELQEELERLEEALeelreELEEAEQALDAAERELAQLQARLDS 493
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 487 IKDLEGRVQQLMGEAENSNLQRQKLTQ------EKLELERCYQITCSELqeLKTRQNLLHTEKEhlvNDYEQNVKLLK-- 558
Cdd:TIGR02168 494 LERLQENLEGFSEGVKALLKNQSGLSGilgvlsELISVDEGYEAAIEAA--LGGRLQAVVVENL---NAAKKAIAFLKqn 568
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 559 -----------TKYDSDINILRQEHALSTSK------------------------TSVVIEELEQNIRQLKQ-------- 595
Cdd:TIGR02168 569 elgrvtflpldSIKGTEIQGNDREILKNIEGflgvakdlvkfdpklrkalsyllgGVLVVDDLDNALELAKKlrpgyriv 648
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 596 ------------------QVQESELQRKQQVKDQEDKFHM--EKNHLKYIYEEKVHELKSELDKEKEDAQRKIHKFEEAL 655
Cdd:TIGR02168 649 tldgdlvrpggvitggsaKTNSSILERRREIEELEEKIEEleEKIAELEKALAELRKELEELEEELEQLRKELEELSRQI 728
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 656 KEKEEQLGRVT-EVQRLQAQQADAALEEFKRQVEVTSEkvysdmKEQMEKVEADLSRSKSLREKQSKEFLwQLEDARQRY 734
Cdd:TIGR02168 729 SALRKDLARLEaEVEQLEERIAQLSKELTELEAEIEEL------EERLEEAEEELAEAEAEIEELEAQIE-QLKEELKAL 801
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 735 EQQIVELKLEHEQEKTHLLQQHNAEKDSL--VRDHEREVENLENQLRaanmehenQIQESKKRDAQVIADMEAQVHKLRE 812
Cdd:TIGR02168 802 REALDELRAELTLLNEEAANLRERLESLErrIAATERRLEDLEEQIE--------ELSEDIESLAAEIEELEELIEELES 873
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 813 ELINVNSHRKQQLVELGLLRE--EEKQRAARDHETAVKKLKAEservkMELKKTHAAETEMTLEKANSRLKQIEKEYTQK 890
Cdd:TIGR02168 874 ELEALLNERASLEEALALLRSelEELSEELRELESKRSELRRE-----LEELREKLAQLELRLEGLEVRIDNLQERLSEE 948
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 891 LAKSSQIIAELQTTISSLKEESSRQQLAAERRLQ-------DVIQKFEDEKQQLirdndqaikalqDELETRSNQVRSAE 963
Cdd:TIGR02168 949 YSLTLEEAEALENKIEDDEEEARRRLKRLENKIKelgpvnlAAIEEYEELKERY------------DFLTAQKEDLTEAK 1016
|
....
gi 1958657572 964 KKLQ 967
Cdd:TIGR02168 1017 ETLE 1020
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
314-967 |
2.25e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 62.08 E-value: 2.25e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 314 LRNSSNLHDDHFLSRMHEKELDMKTKMMEAKFSEEKLKLQKKHDAEVQKILERKNNELEELKIL--YKKKQTETEETVRK 391
Cdd:PTZ00121 1254 IRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKAdeAKKKAEEAKKKADA 1333
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 392 LEKKVQILIRDCQVIRETKENQITELKKICEQS-TESLNNDWEKKLHSAV---AEMEKEKFELQKHHTETIQELLEDTNV 467
Cdd:PTZ00121 1334 AKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAeAAEKKKEEAKKKADAAkkkAEEKKKADEAKKKAEEDKKKADELKKA 1413
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 468 RLSKMEGDYMVQTQSTNHMIKDLEGRVQQLMGEAENSNLQRQKLTQEKLELERCYQITCSELQ---ELKTRQNLLHTEKE 544
Cdd:PTZ00121 1414 AAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKkkaEEAKKADEAKKKAE 1493
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 545 HLVNDYEQNVKLLKTKYDSD----INILRQEHALSTSKTSVVIEELE--QNIRQLKQQVQESELQRKQQVKDQEDKFHME 618
Cdd:PTZ00121 1494 EAKKKADEAKKAAEAKKKADeakkAEEAKKADEAKKAEEAKKADEAKkaEEKKKADELKKAEELKKAEEKKKAEEAKKAE 1573
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 619 KNH---------LKYIYEEKVHELKSELDKEKEDAQRKIHKFEEAlKEKEEQLGRVTEVQRLQAQQADAALEEFKRQVEV 689
Cdd:PTZ00121 1574 EDKnmalrkaeeAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEA-KIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEEL 1652
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 690 TSEKVYSDMKEQMEKVEADLSRSKSLREKQSKEFLWQLEDARQRYEQQ---IVELKLEHEQEKTHLLQQHNAEKDSLVRD 766
Cdd:PTZ00121 1653 KKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEakkAEELKKKEAEEKKKAEELKKAEEENKIKA 1732
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 767 HEREVENLENQLRAANMEHEnqiQESKKRDAQVIADMEAQVHKLREELINVNSHRKQQLVELGLLREEEKQRAARDHETA 846
Cdd:PTZ00121 1733 EEAKKEAEEDKKKAEEAKKD---EEEKKKIAHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKIKDIFDNFAN 1809
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 847 VKKLKAESERVKMELKKTHAAETEMTLEKANSRLKQIEKEYTQKLAKSSQIIAELQTTISSLKEESSRQQLAAERRLQDV 926
Cdd:PTZ00121 1810 IIEGGKEGNLVINDSKEMEDSAIKEVADSKNMQLEEADAFEKHKFNKNNENGEDGNKEADFNKEKDLKEDDEEEIEEADE 1889
|
650 660 670 680
....*....|....*....|....*....|....*....|....*
gi 1958657572 927 IQKFE-DEKQQLIRDNDQAIK---ALQDELETRSNQVRSAEKKLQ 967
Cdd:PTZ00121 1890 IEKIDkDDIEREIPNNNMAGKnndIIDDKLDKDEYIKRDAEETRE 1934
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
456-1011 |
6.49e-09 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 60.08 E-value: 6.49e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 456 ETIQELLEDTNVRLSKMEgDYMVQTQSTNHMIKDLEGRVQQLMGEAENSNLQRQKLTQEKLELERCYQitcsELQELKTR 535
Cdd:PRK03918 165 KNLGEVIKEIKRRIERLE-KFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVK----ELEELKEE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 536 QNLLHTEKEHLvndyEQNVKLLKTKY---DSDINILRQEhalstsktsvvIEELEQNIRQLKQQVQESE----------- 601
Cdd:PRK03918 240 IEELEKELESL----EGSKRKLEEKIrelEERIEELKKE-----------IEELEEKVKELKELKEKAEeyiklsefyee 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 602 -LQRKQQVKDQEDKFHMEKNHLKYIY---EEKVHELKsELDKEKEDAQRKIHKFEEALKEKEEQLGRVTEVQRLQAQQAD 677
Cdd:PRK03918 305 yLDELREIEKRLSRLEEEINGIEERIkelEEKEERLE-ELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTG 383
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 678 AALEEFKRQVEvTSEKVYSDMKEQMEKVEADLSRSKSlREKQSKEFLWQLEDARQRYEQQIVELKLEHEQEkthLLQQHN 757
Cdd:PRK03918 384 LTPEKLEKELE-ELEKAKEEIEEEISKITARIGELKK-EIKELKKAIEELKKAKGKCPVCGRELTEEHRKE---LLEEYT 458
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 758 AEKDSlVRDHEREVENLENQLRAANMEHENQIQESKKRDAQviadmeaqvHKLREELINVnshrKQQLVELGLLREEEKQ 837
Cdd:PRK03918 459 AELKR-IEKELKEIEEKERKLRKELRELEKVLKKESELIKL---------KELAEQLKEL----EEKLKKYNLEELEKKA 524
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 838 RAARDHETAVKKLKAESERVKMELKKTHA-----AETEMTLEKANSRLKQIEKEYTQKLAKSsqiIAELQTTISSLKEES 912
Cdd:PRK03918 525 EEYEKLKEKLIKLKGEIKSLKKELEKLEElkkklAELEKKLDELEEELAELLKELEELGFES---VEELEERLKELEPFY 601
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 913 SR--QQLAAERRLQDVIQKFEDEKQQLirdnDQAIKALQD---ELETRSNQVRSAEKKLQHKELE-AQEQMMYIRQEYET 986
Cdd:PRK03918 602 NEylELKDAEKELEREEKELKKLEEEL----DKAFEELAEtekRLEELRKELEELEKKYSEEEYEeLREEYLELSRELAG 677
|
570 580
....*....|....*....|....*.
gi 1958657572 987 KFKGLMPA-SLRQELEDTISSLKSQV 1011
Cdd:PRK03918 678 LRAELEELeKRREEIKKTLEKLKEEL 703
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
635-1024 |
8.53e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 59.70 E-value: 8.53e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 635 SELDKEKEDA-------QRKIHKFEEALKEKEEQLGRVtEVQRLQAQQADAALEEfKRQVEVTSE-KVYSDMKEQMEKVE 706
Cdd:TIGR02169 166 AEFDRKKEKAleeleevEENIERLDLIIDEKRQQLERL-RREREKAERYQALLKE-KREYEGYELlKEKEALERQKEAIE 243
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 707 ADLSRskslREKQSKEFLWQLEDARQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSLvRDHEREVENLENQLRAANMEHE 786
Cdd:TIGR02169 244 RQLAS----LEEELEKLTEEISELEKRLEEIEQLLEELNKKIKDLGEEEQLRVKEKI-GELEAEIASLERSIAEKERELE 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 787 nqiqeskkrdaqviaDMEAQVHKLREELinvnshRKQQLVELGLLREEEKQRAARDH-ETAVKKLKAESERVKMELKKth 865
Cdd:TIGR02169 319 ---------------DAEERLAKLEAEI------DKLLAEIEELEREIEEERKRRDKlTEEYAELKEELEDLRAELEE-- 375
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 866 aaetemtLEKANSRLKQIEKEYTQKLAKSSQIIAELQTTISSLKEESSRQqlaaerrlqdviqkfeDEKQQLIRDNDQAI 945
Cdd:TIGR02169 376 -------VDKEFAETRDELKDYREKLEKLKREINELKRELDRLQEELQRL----------------SEELADLNAAIAGI 432
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958657572 946 KALQDELETRSNQVRSAEKKLQHKELEAQEQMMYIRQEYETKFKGLmpaslrQELEDTISSLKSQVNFLQKRASILQEE 1024
Cdd:TIGR02169 433 EAKINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEY------DRVEKELSKLQRELAEAEAQARASEER 505
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
486-967 |
9.67e-09 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 59.80 E-value: 9.67e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 486 MIKDLEGRVQQLMgeAENSNLQRQ----------------KLTQEKLELERCYQITCSELQELKTRQNLLHTEKEHLvnd 549
Cdd:pfam01576 27 ELKELEKKHQQLC--EEKNALQEQlqaetelcaeaeemraRLAARKQELEEILHELESRLEEEEERSQQLQNEKKKM--- 101
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 550 yEQNVKLLKTKYDSDiNILRQEHALSTSKTSVVIEELEQNIRQLKqqvqeselqrkqqvkDQEDKFHMEKNHLkyiyEEK 629
Cdd:pfam01576 102 -QQHIQDLEEQLDEE-EAARQKLQLEKVTTEAKIKKLEEDILLLE---------------DQNSKLSKERKLL----EER 160
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 630 VHELKSELDKEKEDAqrkihKFEEALKEKEEQLGRVTEVQRLQAQQADAALEEFKRQVEVTSEKVY---SDMKEQMEKVE 706
Cdd:pfam01576 161 ISEFTSNLAEEEEKA-----KSLSKLKNKHEAMISDLEERLKKEEKGRQELEKAKRKLEGESTDLQeqiAELQAQIAELR 235
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 707 ADLSRS----------------------KSLREKQS-----KEFLWQLEDARQRYEQQIVELKLEHEQEKTHLL--QQHN 757
Cdd:pfam01576 236 AQLAKKeeelqaalarleeetaqknnalKKIRELEAqiselQEDLESERAARNKAEKQRRDLGEELEALKTELEdtLDTT 315
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 758 AEKDSLVRDHEREVENLENQLRAANMEHENQIQESKKRDAQVIADMEAQVHKLREELINVNSHRKQQLVELGLLREEEK- 836
Cdd:pfam01576 316 AAQQELRSKREQEVTELKKALEEETRSHEAQLQEMRQKHTQALEELTEQLEQAKRNKANLEKAKQALESENAELQAELRt 395
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 837 -QRAARDHETAVKKLKA----------ESERVKMEL-KKTHAAETEmtLEKANSRLKQIEKEYTQKLAKSSQIIAELQTT 904
Cdd:pfam01576 396 lQQAKQDSEHKRKKLEGqlqelqarlsESERQRAELaEKLSKLQSE--LESVSSLLNEAEGKNIKLSKDVSSLESQLQDT 473
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1958657572 905 ISSLKEEsSRQQLAAERRLqdviQKFEDEK---QQLIRDNDQAIKALQDELETRSNQVRSAEKKLQ 967
Cdd:pfam01576 474 QELLQEE-TRQKLNLSTRL----RQLEDERnslQEQLEEEEEAKRNVERQLSTLQAQLSDMKKKLE 534
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
348-1031 |
1.48e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 58.93 E-value: 1.48e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 348 EKLKLQKKHDAEVQKILERKNNELEEL------KILYKKKQTETEET-VRKLEKKVQILIRDcqviRETKENQITELKKI 420
Cdd:TIGR02169 177 EELEEVEENIERLDLIIDEKRQQLERLrrerekAERYQALLKEKREYeGYELLKEKEALERQ----KEAIERQLASLEEE 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 421 CEQSTESLNndwekklhsavaEMEKEkfelqkhhTETIQELLEDTNVRLSKMEGDYMVQTQSTnhmIKDLEGRVQQLMGE 500
Cdd:TIGR02169 253 LEKLTEEIS------------ELEKR--------LEEIEQLLEELNKKIKDLGEEEQLRVKEK---IGELEAEIASLERS 309
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 501 AENSNLQRQKLTQEKLELERCYQITCSELQELKTRQNLLHTEKEHLVNDYEQnvklLKTKYD---SDINILRQEHALSTS 577
Cdd:TIGR02169 310 IAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEERKRRDKLTEEYAE----LKEELEdlrAELEEVDKEFAETRD 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 578 KTSVVIEELEQNIRQLKQ-QVQESELQRKQQVKDQEDKFHmeKNHLKYIYEEKvhelkSELDKEKEDAQRKIHKFEEALK 656
Cdd:TIGR02169 386 ELKDYREKLEKLKREINElKRELDRLQEELQRLSEELADL--NAAIAGIEAKI-----NELEEEKEDKALEIKKQEWKLE 458
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 657 EKEEQLGRV--------TEVQRLQAQQADAALE----EFKRQVEVTSEKVYSDMKEQMEK----VEADLSRSKSLREKQS 720
Cdd:TIGR02169 459 QLAADLSKYeqelydlkEEYDRVEKELSKLQRElaeaEAQARASEERVRGGRAVEEVLKAsiqgVHGTVAQLGSVGERYA 538
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 721 KeflwQLEDARQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSL-----VRDHEREVENLENQLR---AANM-EHENQIQE 791
Cdd:TIGR02169 539 T----AIEVAAGNRLNNVVVEDDAVAKEAIELLKRRKAGRATFlplnkMRDERRDLSILSEDGVigfAVDLvEFDPKYEP 614
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 792 SKK---RDAQVIADMEAQvhklREELINV-----------------NSHRKQQLVELGLLREEEKQRAARDHEtavKKLK 851
Cdd:TIGR02169 615 AFKyvfGDTLVVEDIEAA----RRLMGKYrmvtlegelfeksgamtGGSRAPRGGILFSRSEPAELQRLRERL---EGLK 687
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 852 AESERVKMELK--KTHAAETEMTLEKANSRLKQIEKEYT---QKLAKSSQIIAELQTTISSLKEE-----SSRQQLAAE- 920
Cdd:TIGR02169 688 RELSSLQSELRriENRLDELSQELSDASRKIGEIEKEIEqleQEEEKLKERLEELEEDLSSLEQEienvkSELKELEARi 767
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 921 RRLQDVIQKFEDEKQQL-IRDNDQAIKALQDELETRSNQVRSAEKKLQhkELEAQEQMMYIRQEY-ETKFKGLMpaSLRQ 998
Cdd:TIGR02169 768 EELEEDLHKLEEALNDLeARLSHSRIPEIQAELSKLEEEVSRIEARLR--EIEQKLNRLTLEKEYlEKEIQELQ--EQRI 843
|
730 740 750
....*....|....*....|....*....|...
gi 1958657572 999 ELEDTISSLKSQVNFLQKRASILQEELTTYQSR 1031
Cdd:TIGR02169 844 DLKEQIKSIEKEIENLNGKKEELEEELEELEAA 876
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
584-987 |
2.10e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 58.61 E-value: 2.10e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 584 EELEQNIRQLKQQVQESELQRK-QQVKDQEDKFHMEKNHlKYIYEEKVHELKSELDkEKEDAQRKIHKFEEAlKEKEEQL 662
Cdd:PTZ00121 1258 EEARMAHFARRQAAIKAEEARKaDELKKAEEKKKADEAK-KAEEKKKADEAKKKAE-EAKKADEAKKKAEEA-KKKADAA 1334
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 663 GRVTEVQRLQAQQADAALEEFKRQVEVTSEKVYSD-MKEQMEKVEADLSRSKSLREKQSKEFLWQLEDARQRYEqqivEL 741
Cdd:PTZ00121 1335 KKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAeKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKAD----EL 1410
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 742 KLEHEQEKthllqqhNAEKDSLVRDHEREVENLENQLRAANMEHENQIQESKKRDAQVIADMEAQVHKLREELINVNSHR 821
Cdd:PTZ00121 1411 KKAAAAKK-------KADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAK 1483
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 822 KQQlvELGLLREEEKQRAARDHETAVKKLKAESERVKMELKKTHAAETEMTLEKANSRLKQIEKEYTQKLAKSSQI-IAE 900
Cdd:PTZ00121 1484 KAD--EAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELkKAE 1561
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 901 LQTTISSLKEESSRQQLAA----------ERRLQDVIQKFEDEK----QQLIRDNDQAIKA--LQDELETRSN----QVR 960
Cdd:PTZ00121 1562 EKKKAEEAKKAEEDKNMALrkaeeakkaeEARIEEVMKLYEEEKkmkaEEAKKAEEAKIKAeeLKKAEEEKKKveqlKKK 1641
|
410 420
....*....|....*....|....*..
gi 1958657572 961 SAEKKLQHKELEAQEQMMYIRQEYETK 987
Cdd:PTZ00121 1642 EAEEKKKAEELKKAEEENKIKAAEEAK 1668
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
314-1032 |
3.89e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 57.82 E-value: 3.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 314 LRNSSNLHDDHFLSrMHEKELDMKTKMMEAKFSEEKLKLQKKHDAEVQKILERK-NNELEELKILYKKKQTETEETVRKL 392
Cdd:pfam15921 94 LNESNELHEKQKFY-LRQSVIDLQTKLQEMQMERDAMADIRRRESQSQEDLRNQlQNTVHELEAAKCLKEDMLEDSNTQI 172
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 393 EKKVQILIRDCQVIRETK----ENQITELKKICEQstESLNNDWEKKLHSAVAEMEKE---KFELQKHHTETIQELLEDT 465
Cdd:pfam15921 173 EQLRKMMLSHEGVLQEIRsilvDFEEASGKKIYEH--DSMSTMHFRSLGSAISKILREldtEISYLKGRIFPVEDQLEAL 250
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 466 NVR-LSKMEGDYMVQTQSTNHMIKDLEGRVQQLMGEAENSNLQRQKLtQEKLEL-----ERCYQITCSELQELKTRQNLL 539
Cdd:pfam15921 251 KSEsQNKIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQANSI-QSQLEIiqeqaRNQNSMYMRQLSDLESTVSQL 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 540 HTEKEHLVNDYEQNVKLLKTKY---DSDINILRQEHALSTSKTSVVIEELEQNIRQLKQQVQESELQRKQQVK--DQEDK 614
Cdd:pfam15921 330 RSELREAKRMYEDKIEELEKQLvlaNSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQNKRlwDRDTG 409
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 615 FHMEKNHLKYIYEEK---VHELKSELDKEKEDAQRKIHKFEEALKEKEEQLGRVTEVqrlqAQQADAALEEFKRQVEVTS 691
Cdd:pfam15921 410 NSITIDHLRRELDDRnmeVQRLEALLKAMKSECQGQMERQMAAIQGKNESLEKVSSL----TAQLESTKEMLRKVVEELT 485
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 692 EKVYSdmKEQMEKVEADLSRSKSLREKQSKEFLWQLEDARQRYEQQIVELK--------LEHEQEKTHLLQQHNAEKDSL 763
Cdd:pfam15921 486 AKKMT--LESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQhlknegdhLRNVQTECEALKLQMAEKDKV 563
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 764 VRDHEREVENLenqlraanmeheNQIQESKKRDAQVIADMEAQVHKlreeliNVNShRKQQLVELGLLREEeKQRAARDH 843
Cdd:pfam15921 564 IEILRQQIENM------------TQLVGQHGRTAGAMQVEKAQLEK------EIND-RRLELQEFKILKDK-KDAKIREL 623
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 844 ETAVKKLkaESERVKMelkkthaaetemtLEKANSRLKQIEKEYTQKlaksSQIIAELQTTISSLKEESSRQQLAaERRL 923
Cdd:pfam15921 624 EARVSDL--ELEKVKL-------------VNAGSERLRAVKDIKQER----DQLLNEVKTSRNELNSLSEDYEVL-KRNF 683
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 924 QDVIQKFEDEKQQLirdnDQAIKALQDELETRSNQVRSAEKKLQHkeleAQEQMMYIRQEYETKfKGLMPA--SLRQELE 1001
Cdd:pfam15921 684 RNKSEEMETTTNKL----KMQLKSAQSELEQTRNTLKSMEGSDGH----AMKVAMGMQKQITAK-RGQIDAlqSKIQFLE 754
|
730 740 750
....*....|....*....|....*....|.
gi 1958657572 1002 DTISSLKSQVNFLQKRASILQEELTTYQSRR 1032
Cdd:pfam15921 755 EAMTNANKEKHFLKEEKNKLSQELSTVATEK 785
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
582-1027 |
3.99e-08 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 57.82 E-value: 3.99e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 582 VIEELEQNIRQLKQQVQES-ELQRKQ-----------QVKDQEdkFHMEKNHLKYIyeeKVHELKSELDKeKEDAQRKIH 649
Cdd:pfam15921 79 VLEEYSHQVKDLQRRLNESnELHEKQkfylrqsvidlQTKLQE--MQMERDAMADI---RRRESQSQEDL-RNQLQNTVH 152
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 650 KFEEALKEKEEQLGRV-TEVQRLQAQ--QADAALEEFKRQV----EVTSEKVYS-DMKEQMEKVEADLSRSKSLREKQSK 721
Cdd:pfam15921 153 ELEAAKCLKEDMLEDSnTQIEQLRKMmlSHEGVLQEIRSILvdfeEASGKKIYEhDSMSTMHFRSLGSAISKILRELDTE 232
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 722 efLWQLEDARQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSLVRDHEREVENLENQLRAANMEhENQIQeskkrdaqvia 801
Cdd:pfam15921 233 --ISYLKGRIFPVEDQLEALKSESQNKIELLLQQHQDRIEQLISEHEVEITGLTEKASSARSQ-ANSIQ----------- 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 802 dmeAQVHKLREELINVNSHRKQQLVELgllreeekqraardhETAVKKLKAESERVKmELKKTHAAETEMTLEKANSRLK 881
Cdd:pfam15921 299 ---SQLEIIQEQARNQNSMYMRQLSDL---------------ESTVSQLRSELREAK-RMYEDKIEELEKQLVLANSELT 359
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 882 QIEKEYTQKLAKSSQIIAELQTTISSLKEEssRQQLAAERrlqdviqkfEDEKQQLIRD--NDQAIKALQDELETRSNQV 959
Cdd:pfam15921 360 EARTERDQFSQESGNLDDQLQKLLADLHKR--EKELSLEK---------EQNKRLWDRDtgNSITIDHLRRELDDRNMEV 428
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958657572 960 RSAEKKLQHKELEAQEQMMYIRQEYETKFKGLMP-ASLRQELEDTISSLKSQVNFLQKRASILQEELTT 1027
Cdd:pfam15921 429 QRLEALLKAMKSECQGQMERQMAAIQGKNESLEKvSSLTAQLESTKEMLRKVVEELTAKKMTLESSERT 497
|
|
| PRK04778 |
PRK04778 |
septation ring formation regulator EzrA; Provisional |
578-967 |
6.60e-08 |
|
septation ring formation regulator EzrA; Provisional
Pssm-ID: 179877 [Multi-domain] Cd Length: 569 Bit Score: 56.38 E-value: 6.60e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 578 KTSVVIEELEQNIRQLKQQVQESeLQRKQQVKDQEDKFHMEKNHLKYIYEEkvheLKSELDkekedAQRkiHKFEEALKE 657
Cdd:PRK04778 102 KAKHEINEIESLLDLIEEDIEQI-LEELQELLESEEKNREEVEQLKDLYRE----LRKSLL-----ANR--FSFGPALDE 169
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 658 KEEQLgrvtevqrlqaQQADAALEEFKRQVE----VTSEKVYSDMKEQMEKVEADLSRSKSLREKQSKEFLWQLEDARQR 733
Cdd:PRK04778 170 LEKQL-----------ENLEEEFSQFVELTEsgdyVEAREILDQLEEELAALEQIMEEIPELLKELQTELPDQLQELKAG 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 734 YEQQIVE-LKLEHEQEKTHLLQQHNAEKDSLVRDHEREVENLENQLRAAN---------MEHE----NQIQESKKRDAQV 799
Cdd:PRK04778 239 YRELVEEgYHLDHLDIEKEIQDLKEQIDENLALLEELDLDEAEEKNEEIQeridqlydiLEREvkarKYVEKNSDTLPDF 318
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 800 IADMEAQVHKLREELinvnshrkQQLVELGLLREEEKQRaARDHETAVKKLKAESERVKMELKKTHAA--ETEMTLEKAN 877
Cdd:PRK04778 319 LEHAKEQNKELKEEI--------DRVKQSYTLNESELES-VRQLEKQLESLEKQYDEITERIAEQEIAysELQEELEEIL 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 878 SRLKQIEKEytqklakssqiIAELQTTISSLKEEssrqQLAAERRLQDVIQKFEDEKQQLIRDNDQAI-KALQDELETRS 956
Cdd:PRK04778 390 KQLEEIEKE-----------QEKLSEMLQGLRKD----ELEAREKLERYRNKLHEIKRYLEKSNLPGLpEDYLEMFFEVS 454
|
410
....*....|.
gi 1958657572 957 NQVRSAEKKLQ 967
Cdd:PRK04778 455 DEIEALAEELE 465
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
584-987 |
1.06e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 56.30 E-value: 1.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 584 EELEQNIRQLKQQVQESELQRKQQVKDQEDKFHMEK----NHLKYIYEE--KVHELKSELDkEKEDAQRKIHKFEEA--- 654
Cdd:PTZ00121 1394 DEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEkkkaDEAKKKAEEakKADEAKKKAE-EAKKAEEAKKKAEEAkka 1472
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 655 --LKEKEEQLGRVTEVQRlQAQQADAALEEFKRQVEvtSEKVYSDMKEQMEKVEADLSR----------SKSLREKQSKE 722
Cdd:PTZ00121 1473 deAKKKAEEAKKADEAKK-KAEEAKKKADEAKKAAE--AKKKADEAKKAEEAKKADEAKkaeeakkadeAKKAEEKKKAD 1549
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 723 FLWQLEDARQRYEQQIVELKLEHEQEKTHLLQQ----HNAEKDSLVRDHEREVENLENQLRAANMEHENQIQESKKRDAQ 798
Cdd:PTZ00121 1550 ELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKaeeaKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAE 1629
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 799 VIADMEAQVHKLREELINVNSHRKQQLVELGLLREEEKQRAARDHETAVKKLKAESE-RVKMELKKTHAAETEmtlekan 877
Cdd:PTZ00121 1630 EEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDeKKAAEALKKEAEEAK------- 1702
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 878 sRLKQIEKEYTQKLAKSSQIIAELQttISSLKEESSRQQLAAERRLQDVIQKFEDEKQQlirdndqaIKALQDELETRSN 957
Cdd:PTZ00121 1703 -KAEELKKKEAEEKKKAEELKKAEE--ENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKK--------IAHLKKEEEKKAE 1771
|
410 420 430
....*....|....*....|....*....|
gi 1958657572 958 QVRSAEKKLQHKELEAQEQMMYIRQEYETK 987
Cdd:PTZ00121 1772 EIRKEKEAVIEEELDEEDEKRRMEVDKKIK 1801
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
583-936 |
1.28e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 55.84 E-value: 1.28e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 583 IEELEQNIRQLKQQVQESElqRKQQVKDQEdkfhmeknhlkyiYEEKVHELKsELDKEKEDAQRKIHKFEEALKEKEEQL 662
Cdd:TIGR02169 725 IEQLEQEEEKLKERLEELE--EDLSSLEQE-------------IENVKSELK-ELEARIEELEEDLHKLEEALNDLEARL 788
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 663 GRVtevqrlQAQQADAALEEFKRQVevtsekvySDMKEQMEKVEADLSRSKSLREkqskeflwQLEDARQRYEQQIVELK 742
Cdd:TIGR02169 789 SHS------RIPEIQAELSKLEEEV--------SRIEARLREIEQKLNRLTLEKE--------YLEKEIQELQEQRIDLK 846
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 743 L--EHEQEKTHLLQQHNAEKDSLVRDHEREVENLENQ---LRAANMEHENQIQESKKRdaqvIADMEAQVHKLREELinv 817
Cdd:TIGR02169 847 EqiKSIEKEIENLNGKKEELEEELEELEAALRDLESRlgdLKKERDELEAQLRELERK----IEELEAQIEKKRKRL--- 919
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 818 nshrKQQLVELGLLREEEKQ-RAARDHETAVKKLKAESERVKMELKKTHAAetEMTLEKANSRLKQiekEYtqklakssq 896
Cdd:TIGR02169 920 ----SELKAKLEALEEELSEiEDPKGEDEEIPEEELSLEDVQAELQRVEEE--IRALEPVNMLAIQ---EY--------- 981
|
330 340 350 360
....*....|....*....|....*....|....*....|.
gi 1958657572 897 iiAELQTTISSLKEEssRQQLAAERR-LQDVIQKFEDEKQQ 936
Cdd:TIGR02169 982 --EEVLKRLDELKEK--RAKLEEERKaILERIEEYEKKKRE 1018
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
347-717 |
1.38e-07 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 55.83 E-value: 1.38e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 347 EEKLKLQKKHDAEVQKILERKNNELEELKILYKKKQTETEETVRKL---EKKVQILIRDCQVIRETKENQITELKKICEQ 423
Cdd:TIGR02168 683 EEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQIsalRKDLARLEAEVEQLEERIAQLSKELTELEAE 762
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 424 STESLNNDWEKKLHSAVAEMEKEKFELQkhhTETIQELLEDTNVRLSKMEGDYmvqtQSTNHMIKDLEGRVQQLMGEAEN 503
Cdd:TIGR02168 763 IEELEERLEEAEEELAEAEAEIEELEAQ---IEQLKEELKALREALDELRAEL----TLLNEEAANLRERLESLERRIAA 835
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 504 SNLQRQKLTQEKLELERCYQITCSELQELKTRQNLLHTEKEHLVNDYEQnvkllktkydsdINILRQEHALSTSKTSVVI 583
Cdd:TIGR02168 836 TERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERAS------------LEEALALLRSELEELSEEL 903
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 584 EELEQNIRQLKQQVQESElQRKQQVKDQEDKFHMEKNHLK-------YIYEEKVHELKSELDKEKEDAQRKIHKFEEALK 656
Cdd:TIGR02168 904 RELESKRSELRRELEELR-EKLAQLELRLEGLEVRIDNLQerlseeySLTLEEAEALENKIEDDEEEARRRLKRLENKIK 982
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1958657572 657 EkeeqLGRVTEvqrlqaqqadAALEEFKRQvevtsEKVYSDMKEQMEkveaDLSRSK-SLRE 717
Cdd:TIGR02168 983 E----LGPVNL----------AAIEEYEEL-----KERYDFLTAQKE----DLTEAKeTLEE 1021
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
645-993 |
1.39e-07 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 55.51 E-value: 1.39e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 645 QRKIHKFE-EALKEKEEQLGRVTEVQRLQAQQADAALEEFKRQVEVTSEKVYSDMKEQMEkveadLSRSKSLREKQSKEF 723
Cdd:pfam17380 290 QEKFEKMEqERLRQEKEEKAREVERRRKLEEAEKARQAEMDRQAAIYAEQERMAMERERE-----LERIRQEERKRELER 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 724 LWQLEDARQRYEQQIVE-LKLEHEQEKTHLLQQHNAEKDSLVRDHEREVENLENQLRAANMEHENQiqESKKRDAQVIAD 802
Cdd:pfam17380 365 IRQEEIAMEISRMRELErLQMERQQKNERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQE--EARQREVRRLEE 442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 803 MEA-QVHKLREElinvnSHRKQQLVELGLLREEEKQRAARDHETAVKKLKAESERVKMELKKTHAAETEMTLEKANSRlK 881
Cdd:pfam17380 443 ERArEMERVRLE-----EQERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEKELEERKQAMIEEERKR-K 516
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 882 QIEKEYTQKlaksSQIIAELQTTISSLKEESSRQQLAAERRLQDVIQKFEDEKQQLirdndqaiKALQDELETRsNQVRS 961
Cdd:pfam17380 517 LLEKEMEER----QKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRL--------EAMEREREMM-RQIVE 583
|
330 340 350
....*....|....*....|....*....|..
gi 1958657572 962 AEKklQHKELEAQEQMMYIRQEYETKFKGLMP 993
Cdd:pfam17380 584 SEK--ARAEYEATTPITTIKPIYRPRISEYQP 613
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
326-937 |
1.52e-07 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 55.71 E-value: 1.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 326 LSRMHEKELDMKTKMMEAKFSEEKLKLQKKHDAEVQKILERKNNELEELKILYKKKQTETEETVRKLEKKVQILIRDCQV 405
Cdd:COG1196 231 LLKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEER 310
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 406 IRETKENQITELKKIceQSTESLNNDWEKKLHSAVAEMEKEKFELqkhhtETIQELLEDTNVRLSKMEgdymvqtQSTNH 485
Cdd:COG1196 311 RRELEERLEELEEEL--AELEEELEELEEELEELEEELEEAEEEL-----EEAEAELAEAEEALLEAE-------AELAE 376
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 486 MIKDLEGRVQQLMGEAENSNLQRQKLTQEKLELERcyqitcsELQELKTRQNLLHTEKEHLVNDYEQNVKLLKTKYDSDI 565
Cdd:COG1196 377 AEEELEELAEELLEALRAAAELAAQLEELEEAEEA-------LLERLERLEEELEELEEALAELEEEEEEEEEALEEAAE 449
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 566 NILRQEHALSTSKTSvvIEELEQNIRQLKQQVQESELQRKQQVKDQEDKFHMEKNHLKYIYEEKVHELKSELDKEKEDAQ 645
Cdd:COG1196 450 EEAELEEEEEALLEL--LAELLEEAALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVA 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 646 RKIHKFEEALKEKEEQLG-RVTEVQRLQAQQADAALEEFKRQVEVTSEKVYSDMKEQMEKVEADLSRSKSLREKQSKEFL 724
Cdd:COG1196 528 VLIGVEAAYEAALEAALAaALQNIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVASD 607
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 725 WQLEDAR-QRYEQQIVELKLEHEQEKTHLLQQHNAEKDSLVRDHEREVENLENQLRAANMEHENQIQESKKRDAQVIADM 803
Cdd:COG1196 608 LREADARyYVLGDTLLGRTLVAARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAER 687
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 804 EAQVHKLREELINVNSHRKQQLVELGLLREEEKQRAARDHETAVKKLKAESERVKMELKKTHAA-----ETEMTLEKANS 878
Cdd:COG1196 688 LAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEaleelPEPPDLEELER 767
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1958657572 879 RLKQIEKEytqklakssqiIAEL----QTTISSLKEESSR-----QQLA----AERRLQDVIQKFEDEKQQL 937
Cdd:COG1196 768 ELERLERE-----------IEALgpvnLLAIEEYEELEERydflsEQREdleeARETLEEAIEEIDRETRER 828
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
674-911 |
6.00e-07 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 53.77 E-value: 6.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 674 QQADAALEEFKRqvevtsekvYSDMKEQMEKVEADLSRSKSLREKQSKefLWQLEDARQRYEQQIVELKLEHEQEKTHLL 753
Cdd:COG4913 225 EAADALVEHFDD---------LERAHEALEDAREQIELLEPIRELAER--YAAARERLAELEYLRAALRLWFAQRRLELL 293
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 754 QQHNAEKDSLVRDHEREVENLENQLRAANMEHENQIQESKKRDAQVIADMEAQVHKLREELINVNSHRKQ---QLVELGL 830
Cdd:COG4913 294 EAELEELRAELARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARleaLLAALGL 373
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 831 ---LREEEKQRAARDHETAVKKLKAESERVkmelkKTHAAETEMTLEKANSRLKQIEKEYTQKLAKSSQIIAELQTTISS 907
Cdd:COG4913 374 plpASAEEFAALRAEAAALLEALEEELEAL-----EEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALRDA 448
|
....
gi 1958657572 908 LKEE 911
Cdd:COG4913 449 LAEA 452
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
530-1016 |
7.82e-07 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 53.30 E-value: 7.82e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 530 QELKTRQNL---LHTEKEHLVNDYEQNVKLLKtKYDSDINILRQEHALSTSKTSVVIEELEQNIRQLKQQVQ--ESELQR 604
Cdd:pfam12128 248 QEFNTLESAelrLSHLHFGYKSDETLIASRQE-ERQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAkdRSELEA 326
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 605 KQQVKDQEDKFHMEKNHLKYIYEEKVH---ELKSELDKEKEDAQRKIHKFEEALKEKEEQlGRVTEVQRLQaQQADAALE 681
Cdd:pfam12128 327 LEDQHGAFLDADIETAAADQEQLPSWQselENLEERLKALTGKHQDVTAKYNRRRSKIKE-QNNRDIAGIK-DKLAKIRE 404
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 682 EFKRQVEVTS---EKVYSDMKEQMEKVEADLSRSKSLREKQSKEFLWQLEDARQRYE----QQIVELKLEHEQEKthlLQ 754
Cdd:pfam12128 405 ARDRQLAVAEddlQALESELREQLEAGKLEFNEEEYRLKSRLGELKLRLNQATATPElllqLENFDERIERAREE---QE 481
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 755 QHNAEKDSLVRDHEREVENLENQLRAANMEHEnQIQESKKRDAQVIADMEAQVHKLREELINVNSHRKQQLVELglLREE 834
Cdd:pfam12128 482 AANAEVERLQSELRQARKRRDQASEALRQASR-RLEERQSALDELELQLFPQAGTLLHFLRKEAPDWEQSIGKV--ISPE 558
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 835 EKQRAARDHETAVKKLKAESE--RVKMELKKTHAAETEMTLEKANSRLKQIEKEYTQKLAKSSQIIAELqTTISSLKEES 912
Cdd:pfam12128 559 LLHRTDLDPEVWDGSVGGELNlyGVKLDLKRIDVPEWAASEEELRERLDKAEEALQSAREKQAAAEEQL-VQANGELEKA 637
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 913 SRQQLAAERRLQ---DVIQKFEDEKQQLIRDNDQAIKALQDELETRSNQVRSAEKKLQHKE-----------LEAQEQMM 978
Cdd:pfam12128 638 SREETFARTALKnarLDLRRLFDEKQSEKDKKNKALAERKDSANERLNSLEAQLKQLDKKHqawleeqkeqkREARTEKQ 717
|
490 500 510
....*....|....*....|....*....|....*...
gi 1958657572 979 YIRQEYETKFKGLMpASLRQELEDTISSLKSQVNFLQK 1016
Cdd:pfam12128 718 AYWQVVEGALDAQL-ALLKAAIAARRSGAKAELKALET 754
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
591-748 |
8.52e-07 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 52.86 E-value: 8.52e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 591 RQLKQQVQESELQRKQQVKDQEDKFHMEKNHLKYIYEEKVHELKSELDKEKEDAQRKIHKFEEALKEKEEQLGRVTEVQR 670
Cdd:PRK12704 27 KIAEAKIKEAEEEAKRILEEAKKEAEAIKKEALLEAKEEIHKLRNEFEKELRERRNELQKLEKRLLQKEENLDRKLELLE 106
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958657572 671 LQAQQADAALEEFKRQvEVTSEKVYSDMKEQMEKVEADLSRSKSLREKQSKEFLwqLEDARQRYEQQIVELKLEHEQE 748
Cdd:PRK12704 107 KREEELEKKEKELEQK-QQELEKKEEELEELIEEQLQELERISGLTAEEAKEIL--LEKVEEEARHEAAVLIKEIEEE 181
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
593-936 |
1.56e-06 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 52.43 E-value: 1.56e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 593 LKQQVQESELQRKQQVKDQEDKFH-MEKNHLKYIYEEKVHELKSELD-KEKEDAQRKIHKFEEALKEKEEQLG--RVTEV 668
Cdd:pfam17380 271 LNQLLHIVQHQKAVSERQQQEKFEkMEQERLRQEKEEKAREVERRRKlEEAEKARQAEMDRQAAIYAEQERMAmeREREL 350
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 669 QRLQAQQADAALEEFKRQ-VEVTSEKVYSDMKEQMEKVEADlSRSKSLREKQSKEFLWQLEDARQRYEQQIVELKLEHEQ 747
Cdd:pfam17380 351 ERIRQEERKRELERIRQEeIAMEISRMRELERLQMERQQKN-ERVRQELEAARKVKILEEERQRKIQQQKVEMEQIRAEQ 429
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 748 EKTHLLQQHNAEKDslvRDHEREVENLENQLRAANMEHENQiQESKKRDAQVIADMEAQVHKLREELinvnshrKQQLVE 827
Cdd:pfam17380 430 EEARQREVRRLEEE---RAREMERVRLEEQERQQQVERLRQ-QEEERKRKKLELEKEKRDRKRAEEQ-------RRKILE 498
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 828 LGLlreEEKQRAARDHETAVKKLKAEservkMELKKTHAAETEMTLEKANSRLKQIEKEYTQKlakssqiiaeLQTTISS 907
Cdd:pfam17380 499 KEL---EERKQAMIEEERKRKLLEKE-----MEERQKAIYEEERRREAEEERRKQQEMEERRR----------IQEQMRK 560
|
330 340
....*....|....*....|....*....
gi 1958657572 908 LKEESSRQQlAAERRLQDVIQKFEDEKQQ 936
Cdd:pfam17380 561 ATEERSRLE-AMEREREMMRQIVESEKAR 588
|
|
| Nup88 |
pfam10168 |
Nuclear pore component; Nup88 can be divided into two structural domains; the N-terminal ... |
565-777 |
2.54e-06 |
|
Nuclear pore component; Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein has no obvious structural motifs but is the region for binding to Nup98, one of the components of the nuclear pore. the C-terminal end is a predicted coiled-coil domain. Nup88 is overexpressed in tumour cells.
Pssm-ID: 462975 [Multi-domain] Cd Length: 713 Bit Score: 51.58 E-value: 2.54e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 565 INILRQEHALstsKTSVVIEELEQNIRQLKqqvqeseLQRKQQVKDqedkfhmeknhlkyiyeekVHELKSELDKEKEDA 644
Cdd:pfam10168 541 TQVFREEYLK---KHDLAREEIQKRVKLLK-------LQKEQQLQE-------------------LQSLEEERKSLSERA 591
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 645 QRKIHKFEEALKEKEEQLGRVTEV-QRLQAQQADAALEE--FKRQVEvtsekvysDMKEQMEKVEADLSRSKSLREKQSK 721
Cdd:pfam10168 592 EKLAEKYEEIKDKQEKLMRRCKKVlQRLNSQLPVLSDAEreMKKELE--------TINEQLKHLANAIKQAKKKMNYQRY 663
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1958657572 722 eflwQLEDARQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSLVRDhereVENLENQ 777
Cdd:pfam10168 664 ----QIAKSQSIRKKSSLSLSEKQRKTIKEILKQLGSEIDELIKQ----VKDINKH 711
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
382-940 |
3.28e-06 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 51.26 E-value: 3.28e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 382 QTETEETVRKLEKKVQILIrdcqVIRETKENQITELKKICEQSTESLNNDWEK-KLHSAVAEMEKEKFELQKHHTETIQE 460
Cdd:pfam05483 228 EEEYKKEINDKEKQVSLLL----IQITEKENKMKDLTFLLEESRDKANQLEEKtKLQDENLKELIEKKDHLTKELEDIKM 303
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 461 LLEDTNVRLSKMEGDYMVQTQSTNHMIKDLEGRVQQLMGEAENSNLQRQKLTQEKLELERCYQITCSELQELKTRQNLLH 540
Cdd:pfam05483 304 SLQRSMSTQKALEEDLQIATKTICQLTEEKEAQMEELNKAKAAHSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIIT 383
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 541 TEKEHLVNDYEQNVKLLKTK---YDSDINILRQEHALSTSKTSVviEELEQNIRQLKQQVQESELQRKQQVKDQEDKFHM 617
Cdd:pfam05483 384 MELQKKSSELEEMTKFKNNKeveLEELKKILAEDEKLLDEKKQF--EKIAEELKGKEQELIFLLQAREKEIHDLEIQLTA 461
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 618 EKNHLKYiYEEKVHELKSELDKEK-EDAQRKIHKFEEALKEKEeqlgrvtevqrLQAQQADAALEEFKRQVEVTSEKVYS 696
Cdd:pfam05483 462 IKTSEEH-YLKEVEDLKTELEKEKlKNIELTAHCDKLLLENKE-----------LTQEASDMTLELKKHQEDIINCKKQE 529
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 697 D-MKEQMEKVEADLSRSKSLREKQSKEFLWQLEDarqryeqqiVELKLEHEQEKTHLLQQHNAEKDSLVRDHEREVENLE 775
Cdd:pfam05483 530 ErMLKQIENLEEKEMNLRDELESVREEFIQKGDE---------VKCKLDKSEENARSIEYEVLKKEKQMKILENKCNNLK 600
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 776 NQLRAANMEHENQIQESKKRDAQVIAD------MEAQVHKLREELIN--------VNSHRKQ----QLVELGLLREEEKQ 837
Cdd:pfam05483 601 KQIENKNKNIEELHQENKALKKKGSAEnkqlnaYEIKVNKLELELASakqkfeeiIDNYQKEiedkKISEEKLLEEVEKA 680
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 838 RAARDHETAVKK---LKAESERVKM-ELKKTHAAETEMTLEKANSRLKQiekeYTQKLAKSSQIIAELQTTISSLKEE-- 911
Cdd:pfam05483 681 KAIADEAVKLQKeidKRCQHKIAEMvALMEKHKHQYDKIIEERDSELGL----YKNKEQEQSSAKAALEIELSNIKAEll 756
|
570 580
....*....|....*....|....*....
gi 1958657572 912 SSRQQLAAERRLQDVIQKFEDEKQQLIRD 940
Cdd:pfam05483 757 SLKKQLEIEKEEKEKLKMEAKENTAILKD 785
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
692-1032 |
4.03e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 51.27 E-value: 4.03e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 692 EKVYSDMKEQMEKVEADLSRSKSLREKQsKEFLwqledarqryEQQIVELKLEheqekthlLQQHNAEKDSLVRDHEREV 771
Cdd:pfam15921 77 ERVLEEYSHQVKDLQRRLNESNELHEKQ-KFYL----------RQSVIDLQTK--------LQEMQMERDAMADIRRRES 137
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 772 ---ENLENQLRaaNMEHENQIQESKKRDaqVIADMEAQVHKLreelinvnshRKQQLVELGLLREeekqraardhetaVK 848
Cdd:pfam15921 138 qsqEDLRNQLQ--NTVHELEAAKCLKED--MLEDSNTQIEQL----------RKMMLSHEGVLQE-------------IR 190
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 849 KLKAESERVKMELKKTHAAETEMTLEKANSRLKQIEKEYTQKLAKSSQIIAELQTTISSLKEESsrqqlaaERRLQDVIQ 928
Cdd:pfam15921 191 SILVDFEEASGKKIYEHDSMSTMHFRSLGSAISKILRELDTEISYLKGRIFPVEDQLEALKSES-------QNKIELLLQ 263
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 929 KFEDEKQQLIRDNDQAIKALQDELETRSNQVRSAEKKLQHKELEAQEQ-MMYIRQEYETKFkglMPASLRQELEDTISSL 1007
Cdd:pfam15921 264 QHQDRIEQLISEHEVEITGLTEKASSARSQANSIQSQLEIIQEQARNQnSMYMRQLSDLES---TVSQLRSELREAKRMY 340
|
330 340
....*....|....*....|....*
gi 1958657572 1008 KSQVNFLQKRASILQEELTTYQSRR 1032
Cdd:pfam15921 341 EDKIEELEKQLVLANSELTEARTER 365
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
348-953 |
4.88e-06 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 50.99 E-value: 4.88e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 348 EKLKLQKKHDAEVQKILERKNnelEELKILYKKKQTETEETVRKLEKKVQILIRDCQVIRETKENQ---ITELKKICEQS 424
Cdd:pfam12128 340 ETAAADQEQLPSWQSELENLE---ERLKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIreaRDRQLAVAEDD 416
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 425 TESLNNDWEKKLHSAVAEMEKEKFELQKHHTE---------TIQELLEDTNVRLSKMEGDYMVQTQSTNHmIKDLEGRVQ 495
Cdd:pfam12128 417 LQALESELREQLEAGKLEFNEEEYRLKSRLGElklrlnqatATPELLLQLENFDERIERAREEQEAANAE-VERLQSELR 495
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 496 QLMGEAENSNLQRQKLTQEKLELercyQITCSELQE-LKTRQNLLHTEKEHLVNDYEQNV-------KLLKTKYDSDINI 567
Cdd:pfam12128 496 QARKRRDQASEALRQASRRLEER----QSALDELELqLFPQAGTLLHFLRKEAPDWEQSIgkvispeLLHRTDLDPEVWD 571
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 568 LRQEHALSTSKTSVVIEELEQNI-RQLKQQVQESELQRKQQVKDQEDKfhmeknhlkyiyEEKVHELKSELDKEKEDAQR 646
Cdd:pfam12128 572 GSVGGELNLYGVKLDLKRIDVPEwAASEEELRERLDKAEEALQSAREK------------QAAAEEQLVQANGELEKASR 639
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 647 KIHKFEEALKEKEEQLGRVTEVQRLQAQQADAALEEFKRQVEvtsekvysdmkEQMEKVEAdlsrskslrekQSKEFLWQ 726
Cdd:pfam12128 640 EETFARTALKNARLDLRRLFDEKQSEKDKKNKALAERKDSAN-----------ERLNSLEA-----------QLKQLDKK 697
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 727 LEDARQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSLVRDHEREVENLENQLRAANMEHENQIqESKKRDAQVIADMEAQ 806
Cdd:pfam12128 698 HQAWLEEQKEQKREARTEKQAYWQVVEGALDAQLALLKAAIAARRSGAKAELKALETWYKRDL-ASLGVDPDVIAKLKRE 776
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 807 VHKLREELINVNSHRKQQLVELGLLREEEKQRAARdHETAVKKLKAESERVKMELKKThAAETEMTLEKANSRLKQIEKE 886
Cdd:pfam12128 777 IRTLERKIERIAVRRQEVLRYFDWYQETWLQRRPR-LATQLSNIERAISELQQQLARL-IADTKLRRAKLEMERKASEKQ 854
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1958657572 887 yTQKLAKSSQIIAELQTTISSLKEESSRQQLAAErrlqdvIQKFEDEKQQLIRDNDQAIKALQDELE 953
Cdd:pfam12128 855 -QVRLSENLRGLRCEMSKLATLKEDANSEQAQGS------IGERLAQLEDLKLKRDYLSESVKKYVE 914
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
580-1024 |
5.62e-06 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 50.54 E-value: 5.62e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 580 SVVIEELEQNIRQL-KQQVQESELQrKQQVKDQEDKFHMEKNHLKyIYEEKVHELKsELDKEKEDAQRKIHKFEEALKEK 658
Cdd:COG4717 45 AMLLERLEKEADELfKPQGRKPELN-LKELKELEEELKEAEEKEE-EYAELQEELE-ELEEELEELEAELEELREELEKL 121
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 659 EEQLGRVTEVQRLQaqQADAALEEFKRQVEVTSEKV--YSDMKEQMEKVEADLSRSKSLREKQSKEFLWQLEDARQRYEQ 736
Cdd:COG4717 122 EKLLQLLPLYQELE--ALEAELAELPERLEELEERLeeLRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAE 199
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 737 QIVELKLEHEQEKTHLlqqhnAEKDSLVRDHEREVENLENQLRAANMEHENQIQESKKRDAQVIADMEAQVHKLREELIN 816
Cdd:COG4717 200 ELEELQQRLAELEEEL-----EEAQEELEELEEELEQLENELEAAALEERLKEARLLLLIAAALLALLGLGGSLLSLILT 274
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 817 V---------------------------NSHRKQQLVELGLLREEEKQRAARDHETAVKKLKAESERVKMELKKTHAAET 869
Cdd:COG4717 275 IagvlflvlgllallflllarekaslgkEAEELQALPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLR 354
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 870 EMTLEKANSRLKQIEKEYTQKLAKSSQI-------IAELQTTISSLKEE--SSRQQLAAERRLQDVIQKFEDEKQ--QLI 938
Cdd:COG4717 355 EAEELEEELQLEELEQEIAALLAEAGVEdeeelraALEQAEEYQELKEEleELEEQLEELLGELEELLEALDEEEleEEL 434
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 939 RDNDQAIKALQDELETRSNQVRSAEKKLqhKELEAQEQMMYIRQEYETKfkglmpASLRQELEDTISSLKSQVNFLQKRA 1018
Cdd:COG4717 435 EELEEELEELEEELEELREELAELEAEL--EQLEEDGELAELLQELEEL------KAELRELAEEWAALKLALELLEEAR 506
|
....*.
gi 1958657572 1019 SILQEE 1024
Cdd:COG4717 507 EEYREE 512
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
507-875 |
5.85e-06 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 50.74 E-value: 5.85e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 507 QRQKLTQEKLELERCYQITCSELQELKTRQNLLHTEKEHLVNDYEQNVKLLKTKYDSDINILRQEHALSTSKTSVVIEEL 586
Cdd:pfam02463 673 KELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEE 752
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 587 EQNIRQLKQQVQESELQRKQQVKDQEDKFHMEKNHLKYIYEEKVHELKSELDKEKEDAQRKIHKFEEALKEKEEQLGRVT 666
Cdd:pfam02463 753 EKSRLKKEEKEEEKSELSLKEKELAEEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKE 832
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 667 EVQRLQAQQADAALEEFKRQVEVTSEKVYSDMKEQMEKVEADLSRSKSLREKQSKEFLWQLEDARQRYEQQIVELKLEHE 746
Cdd:pfam02463 833 EELEELALELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLL 912
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 747 QEKTHLLQQHNAEKDSLVRDHEREVENLENQLRAANMEHENQIQESKKRdaqviadmEAQVHKLREELINVNSHRKQQLV 826
Cdd:pfam02463 913 EEKENEIEERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEER--------NKRLLLAKEELGKVNLMAIEEFE 984
|
330 340 350 360
....*....|....*....|....*....|....*....|....*....
gi 1958657572 827 ELGLLREEEKQRAARDHETAVKKLKAESERVKMELKKTHAAETEMTLEK 875
Cdd:pfam02463 985 EKEERYNKDELEKERLEEEKKKLIRAIIEETCQRLKEFLELFVSINKGW 1033
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
446-824 |
5.90e-06 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 50.51 E-value: 5.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 446 EKFELQKHHTETIQELLEDTNVRLSKMEGDYMVQTQSTNHMI------KDLEGRVQQLMGEAENSNLQRQKLTQEKLELE 519
Cdd:pfam17380 234 EKMERRKESFNLAEDVTTMTPEYTVRYNGQTMTENEFLNQLLhivqhqKAVSERQQQEKFEKMEQERLRQEKEEKAREVE 313
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 520 RCYQITCSEL--QELKTRQNLLHTEKEHLVNDYEQNVKLLKT--KYDSDINILRQEHALSTSKtsvvIEELE--QNIRQL 593
Cdd:pfam17380 314 RRRKLEEAEKarQAEMDRQAAIYAEQERMAMERERELERIRQeeRKRELERIRQEEIAMEISR----MRELErlQMERQQ 389
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 594 KQQVQESELQRKQQVKDQEdkfhmeKNHLKYIYEEKVHELKseLDKEKEDAQrkihkfEEALKEKEEQLGRVTEVQRLQA 673
Cdd:pfam17380 390 KNERVRQELEAARKVKILE------EERQRKIQQQKVEMEQ--IRAEQEEAR------QREVRRLEEERAREMERVRLEE 455
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 674 QQADAALEEFKRQVEVTSEKVYSDMKEQMEKVEADLSRSKSLREkqskeflwQLEDARQryeqqivelKLEHEQEKTHLL 753
Cdd:pfam17380 456 QERQQQVERLRQQEEERKRKKLELEKEKRDRKRAEEQRRKILEK--------ELEERKQ---------AMIEEERKRKLL 518
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958657572 754 QQHNAEKDSLVRDHEREVENLENQLRAANMEHENQIQESKKRDAQVIADMEAqVHKLREELINVNSHRKQQ 824
Cdd:pfam17380 519 EKEMEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEERSRLEA-MEREREMMRQIVESEKAR 588
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
576-718 |
7.42e-06 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 50.21 E-value: 7.42e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 576 TSKTSVVIEELEQNIRQLKQQVQESELQRKQQvkdqeDKFHMEknhlkyiYEEKVHELKSELDKEKEDAQRKIHK-FEEA 654
Cdd:PRK00409 515 KEKLNELIASLEELERELEQKAEEAEALLKEA-----EKLKEE-------LEEKKEKLQEEEDKLLEEAEKEAQQaIKEA 582
|
90 100 110 120 130 140
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958657572 655 LKEKEEQLGRVTEVQRLQ-----AQQADAALEEFKRQVEVTSEKVYSDMKEQMEKVEADLSRSKSLREK 718
Cdd:PRK00409 583 KKEADEIIKELRQLQKGGyasvkAHELIEARKRLNKANEKKEKKKKKQKEKQEELKVGDEVKYLSLGQK 651
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
765-1032 |
9.24e-06 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 49.94 E-value: 9.24e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 765 RDHEREVENLENQLRAANMEHENQIQESKKRDAQ----VIADMEAQVHKLREEL---------INVNSHRKQQLVELGLL 831
Cdd:COG1196 216 RELKEELKELEAELLLLKLRELEAELEELEAELEeleaELEELEAELAELEAELeelrleleeLELELEEAQAEEYELLA 295
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 832 REEEKQRAARDHETAVKKLKAESERVKMELKKTHA---------AETEMTLEKANSRLKQIEKEYTQKLAKSSQIIAELQ 902
Cdd:COG1196 296 ELARLEQDIARLEERRRELEERLEELEEELAELEEeleeleeelEELEEELEEAEEELEEAEAELAEAEEALLEAEAELA 375
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 903 TTISSLKEEssRQQLAAERRLQDVIQKFEDEKQQLIRDNDQAIKALQDELETRSNQVRSAEKKLQHKELEAQEQMMYIRQ 982
Cdd:COG1196 376 EAEEELEEL--AEELLEALRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAE 453
|
250 260 270 280 290
....*....|....*....|....*....|....*....|....*....|
gi 1958657572 983 EYEtkfkglmpasLRQELEDTISSLKSQVNFLQKRASILQEELTTYQSRR 1032
Cdd:COG1196 454 LEE----------EEEALLELLAELLEEAALLEAALAELLEELAEAAARL 493
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
479-837 |
9.40e-06 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 49.73 E-value: 9.40e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 479 QTQSTNHMIKDLEGRVQQLMGEAENSNLQRQKLTQEKLELERCYQITCSELQELKTRQNLLHTEKEHLVN--DYEQNV-- 554
Cdd:pfam15921 469 QLESTKEMLRKVVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNegDHLRNVqt 548
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 555 -----KLLKTKYDSDINILRQEhalstsktsvvIEELEQNIRQLKQQVQESELQRKQQVKDQEDKfHMEKNHLKYIYEEK 629
Cdd:pfam15921 549 ecealKLQMAEKDKVIEILRQQ-----------IENMTQLVGQHGRTAGAMQVEKAQLEKEINDR-RLELQEFKILKDKK 616
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 630 VHELKsELDKEKEDAQRKIHKFEEAlkeKEEQLGRVTEVQrlqaQQADAALEEFKrqvevTSEKVYSDMKEQMEKVEADL 709
Cdd:pfam15921 617 DAKIR-ELEARVSDLELEKVKLVNA---GSERLRAVKDIK----QERDQLLNEVK-----TSRNELNSLSEDYEVLKRNF 683
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 710 SRSKSLREKQSKEFLWQLEDARQRYEQQIVELK-LE----HEQEKTHLLQQHNAEKDSLVRDHEREVENLENQLRAANME 784
Cdd:pfam15921 684 RNKSEEMETTTNKLKMQLKSAQSELEQTRNTLKsMEgsdgHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKE 763
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1958657572 785 hENQIQESKkrdaqviadmeaqvHKLREELINVNSHRKQQLVELGLLREEEKQ 837
Cdd:pfam15921 764 -KHFLKEEK--------------NKLSQELSTVATEKNKMAGELEVLRSQERR 801
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
410-1024 |
1.04e-05 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 49.72 E-value: 1.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 410 KENQITELKKICEQSTESLNNDW--EKKLHSAVAEMEKEKFELQKHHTETIQ--ELLEDTNVRLSKMEGDYMVQTQSTNH 485
Cdd:pfam05483 104 KENKLQENRKIIEAQRKAIQELQfeNEKVSLKLEEEIQENKDLIKENNATRHlcNLLKETCARSAEKTKKYEYEREETRQ 183
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 486 MIKDLEGRVQQLMG-------EAENSNLQRQKLTQEKLE----LERCYQITCSELQELKTRQNLLHTEKEHLVNDyeqnV 554
Cdd:pfam05483 184 VYMDLNNNIEKMILafeelrvQAENARLEMHFKLKEDHEkiqhLEEEYKKEINDKEKQVSLLLIQITEKENKMKD----L 259
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 555 KLLKTKYDSDINILRQEHALSTSKTSVVIEELEQNIRQLkQQVQESELQRKQQVKDQEDKFHMEKNHLKYIYEEKVHELK 634
Cdd:pfam05483 260 TFLLEESRDKANQLEEKTKLQDENLKELIEKKDHLTKEL-EDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEAQME 338
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 635 sELDKEKEDAQRKIHKFEEALKEKEEQLGrvTEVQRLQAQQADAAL---EEFKRQVEVTSEKVYSDMKE-QMEKVEADLS 710
Cdd:pfam05483 339 -ELNKAKAAHSFVVTEFEATTCSLEELLR--TEQQRLEKNEDQLKIitmELQKKSSELEEMTKFKNNKEvELEELKKILA 415
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 711 RSKSLREKQSKefLWQLEDARQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSlVRDHEREVENLENQLRAANME------ 784
Cdd:pfam05483 416 EDEKLLDEKKQ--FEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTS-EEHYLKEVEDLKTELEKEKLKnielta 492
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 785 HENQIQESKKRDAQVIADMEAQVHKLREELINVNSHRKQQLVELGLLREEEKQrAARDHETAVKKLKAESERVKMELKKT 864
Cdd:pfam05483 493 HCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMN-LRDELESVREEFIQKGDEVKCKLDKS 571
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 865 --HAAETEMTLEKANSRLKQIEKE---YTQKLAKSSQIIAELQTTISSLKEESS--RQQLAA--------ERRLQDVIQK 929
Cdd:pfam05483 572 eeNARSIEYEVLKKEKQMKILENKcnnLKKQIENKNKNIEELHQENKALKKKGSaeNKQLNAyeikvnklELELASAKQK 651
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 930 FE---DEKQQLIRDNDQAIKALQDELETRSNQVRSA-------EKKLQHKELEAQEQMMYIRQEYET------------K 987
Cdd:pfam05483 652 FEeiiDNYQKEIEDKKISEEKLLEEVEKAKAIADEAvklqkeiDKRCQHKIAEMVALMEKHKHQYDKiieerdselglyK 731
|
650 660 670
....*....|....*....|....*....|....*..
gi 1958657572 988 FKGLMPASLRQELEDTISSLKSQVNFLQKRASILQEE 1024
Cdd:pfam05483 732 NKEQEQSSAKAALEIELSNIKAELLSLKKQLEIEKEE 768
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
326-1030 |
1.30e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 49.27 E-value: 1.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 326 LSRMHEKELDMKTKMMEAKFSEEKLKLQKKHDAEVQKILERKNNELEELKILYKKKQTETEETVRKLEKKVQILIRDCQV 405
Cdd:TIGR00606 188 LETLRQVRQTQGQKVQEHQMELKYLKQYKEKACEIRDQITSKEAQLESSREIVKSYENELDPLKNRLKEIEHNLSKIMKL 267
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 406 iretkENQITELKKIcEQSTESLNNDWEKKLHSAVAEMEKEKFELQKHHTETIQElLEDTNVRLSKMEGDYMVQTQSTNH 485
Cdd:TIGR00606 268 -----DNEIKALKSR-KKQMEKDNSELELKMEKVFQGTDEQLNDLYHNHQRTVRE-KERELVDCQRELEKLNKERRLLNQ 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 486 MIKDLEGRVQQLMGEAENSNLQRQKLTQEKLELERCYQITCSELQELKTRQ--NLLHTEKE----------HLVNDYEQN 553
Cdd:TIGR00606 341 EKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLELDGFERGPFSERQikNFHTLVIErqedeaktaaQLCADLQSK 420
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 554 VKlLKTKYDSDINILRQEHALSTSKTSVVIEELEQNIRQLKQQVQESELQRKQQVKDQEDKFHMEKNHLKYIYEEKVHEL 633
Cdd:TIGR00606 421 ER-LKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERELSKAEKNSLTETL 499
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 634 KSE---LDKEKEDAQRKIHKFEEALKEKEEQLGRVTEVQRLQAQQADAALEEFKRQ----VEVTSEKVYSDMKEQMEKVE 706
Cdd:TIGR00606 500 KKEvksLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKsrhsDELTSLLGYFPNKKQLEDWL 579
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 707 ADLSRSKSLREKQSKEFLWQLEDARQRYEQQIVELKLEHEQEKTHllqQHNAEKDSLVRDHEREVENLENQLraanmehe 786
Cdd:TIGR00606 580 HSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSY---EDKLFDVCGSQDEESDLERLKEEI-------- 648
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 787 nqiqESKKRDAQVIADMEAQVHKLREELINVNShRKQQLVELGLLREEEKQRAARDHETAVKKLKAESERVKMELKKTHA 866
Cdd:TIGR00606 649 ----EKSSKQRAMLAGATAVYSQFITQLTDENQ-SCCPVCQRVFQTEAELQEFISDLQSKLRLAPDKLKSTESELKKKEK 723
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 867 AETEM--TLEKANSRLKQIEKEYTQ---KLAKSSQIIAELQTTISslKEESSRQQLAAERRLQDVIQKFEDEKQQL---I 938
Cdd:TIGR00606 724 RRDEMlgLAPGRQSIIDLKEKEIPElrnKLQKVNRDIQRLKNDIE--EQETLLGTIMPEEESAKVCLTDVTIMERFqmeL 801
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 939 RDNDQAIKALQDELETrSNQVRSAEKKLQHKElEAQEQMMYIRQEYETKFKglmpasLRQELEDTISSLKSQVNFLQKRA 1018
Cdd:TIGR00606 802 KDVERKIAQQAAKLQG-SDLDRTVQQVNQEKQ-EKQHELDTVVSKIELNRK------LIQDQQEQIQHLKSKTNELKSEK 873
|
730
....*....|..
gi 1958657572 1019 SILQEELTTYQS 1030
Cdd:TIGR00606 874 LQIGTNLQRRQQ 885
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
331-1028 |
1.47e-05 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 49.30 E-value: 1.47e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 331 EKELDMKTKMMEAKFSEEKLKLQKKhdaevqkiLERKNNELEELkilyKKKQTETEETVRKLEKKVQILIRDCQVIRETK 410
Cdd:TIGR02169 271 EQLLEELNKKIKDLGEEEQLRVKEK--------IGELEAEIASL----ERSIAEKERELEDAEERLAKLEAEIDKLLAEI 338
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 411 EN---QITELKKICEQSTESLNNDwEKKLHSAVAEMEkekfELQKHHTETIQELLedtnvrlskmegDYMVQTQSTNHMI 487
Cdd:TIGR02169 339 EElerEIEEERKRRDKLTEEYAEL-KEELEDLRAELE----EVDKEFAETRDELK------------DYREKLEKLKREI 401
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 488 KDLEGRVQQLMGEAensnlqrQKLTQEKLELERCYQITCSELQELKTRQNLLHTEKEHLVNDYEQNVKLLKtKYDSDINI 567
Cdd:TIGR02169 402 NELKRELDRLQEEL-------QRLSEELADLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAADLS-KYEQELYD 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 568 LRQEhalstsktsvvIEELEQNIRQLKQQVQESELQRKQQVKDQEDKFHMEKNHLKYIyeEKVHELKSELDKEKEDAQRK 647
Cdd:TIGR02169 474 LKEE-----------YDRVEKELSKLQRELAEAEAQARASEERVRGGRAVEEVLKASI--QGVHGTVAQLGSVGERYATA 540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 648 IH------------KFEEALKE-----KEEQLGRVT--EVQRLQAQQADAA-------------LEEFKRQVEVTSEKVY 695
Cdd:TIGR02169 541 IEvaagnrlnnvvvEDDAVAKEaiellKRRKAGRATflPLNKMRDERRDLSilsedgvigfavdLVEFDPKYEPAFKYVF 620
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 696 SDM---------KEQMEKV-----EADL----------SRSKSLREKQSKEFLWQLEDARQRYEQqiVELKLEHEQEKTH 751
Cdd:TIGR02169 621 GDTlvvedieaaRRLMGKYrmvtlEGELfeksgamtggSRAPRGGILFSRSEPAELQRLRERLEG--LKRELSSLQSELR 698
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 752 LLQQHNAEKDSLVRDHEREVENLENQLRAANMEHE--NQIQESKKRDAQVIADMEAQVhklREELINVNSHRKQQLVELG 829
Cdd:TIGR02169 699 RIENRLDELSQELSDASRKIGEIEKEIEQLEQEEEklKERLEELEEDLSSLEQEIENV---KSELKELEARIEELEEDLH 775
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 830 LLREEEKQRAARDHETAVKKLKAESERVKMELKKthaaetemtLEKANSRLKQIEKEYTQKLAKSSQIIAELQTTISSLK 909
Cdd:TIGR02169 776 KLEEALNDLEARLSHSRIPEIQAELSKLEEEVSR---------IEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLK 846
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 910 EessrqQLAAERRLQDVIQKFEDEKQQLIRDNDQAIKALQDELetrsnqvrsaeKKLQHKELEAQEQMMYIRQEYetkfk 989
Cdd:TIGR02169 847 E-----QIKSIEKEIENLNGKKEELEEELEELEAALRDLESRL-----------GDLKKERDELEAQLRELERKI----- 905
|
730 740 750
....*....|....*....|....*....|....*....
gi 1958657572 990 glmpaslrQELEDTISSLKSQVNFLQKRASILQEELTTY 1028
Cdd:TIGR02169 906 --------EELEAQIEKKRKRLSELKAKLEALEEELSEI 936
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
573-813 |
2.07e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.22 E-value: 2.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 573 ALSTSKTSVVIEELEQNIRQLKQQVQESELQRKQQVKDQEDKFHMEKNHLKYI--YEEKVHELKSEL---DKEKEDAQRK 647
Cdd:COG4942 12 ALAAAAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIaaLARRIRALEQELaalEAELAELEKE 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 648 IHKFEEALKEKEEQLGRVTEVQRLQAQQADAAL-------EEFKRQVEVTSEkVYSDMKEQMEKVEADLSRSKSLREkqs 720
Cdd:COG4942 92 IAELRAELEAQKEELAELLRALYRLGRQPPLALllspedfLDAVRRLQYLKY-LAPARREQAEELRADLAELAALRA--- 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 721 keflwQLEDARQRYEQQIVELKLEHEQekthlLQQHNAEKDSLVRDHEREVENLENQLRaanmehenQIQESKKRDAQVI 800
Cdd:COG4942 168 -----ELEAERAELEALLAELEEERAA-----LEALKAERQKLLARLEKELAELAAELA--------ELQQEAEELEALI 229
|
250
....*....|...
gi 1958657572 801 ADMEAQVHKLREE 813
Cdd:COG4942 230 ARLEAEAAAAAER 242
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
348-921 |
2.60e-05 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 48.51 E-value: 2.60e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 348 EKLKLQKKHDAEVQKILERKNNELEELKilyKKKQTETEETVRKLEKKVQILI--------RDCQVIRETKENQITE--- 416
Cdd:TIGR01612 1229 EKIDEEKKKSEHMIKAMEAYIEDLDEIK---EKSPEIENEMGIEMDIKAEMETfnishdddKDHHIISKKHDENISDire 1305
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 417 --LKKICEQSTESLNNDWEKKLHSAVAEMekekfelQKHHTETIQELLEDTNV----RLSKMEG------DYMVQTQSTN 484
Cdd:TIGR01612 1306 ksLKIIEDFSEESDINDIKKELQKNLLDA-------QKHNSDINLYLNEIANIynilKLNKIKKiidevkEYTKEIEENN 1378
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 485 HMIKDLEGRVQQLMgeaensnlqrqKLTQEKLELERCyqitcselqelktRQNLLHTEKEHLVNDYEQNVKLLKTkydsd 564
Cdd:TIGR01612 1379 KNIKDELDKSEKLI-----------KKIKDDINLEEC-------------KSKIESTLDDKDIDECIKKIKELKN----- 1429
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 565 iNILRQEHALSTSKTSVviEELEQNIRQLKQQVQESELQRKQQVKDQEDK----FHMEKNHLKYiYEEKVHELKSELDKE 640
Cdd:TIGR01612 1430 -HILSEESNIDTYFKNA--DENNENVLLLFKNIEMADNKSQHILKIKKDNatndHDFNINELKE-HIDKSKGCKDEADKN 1505
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 641 KEDAQRKIHKFEEALKEKEEQLGRVTEVqrlqaqqadaALEEFKRQVEVTSEKVYSDMKEQMEKV--EADLSRSKsLREK 718
Cdd:TIGR01612 1506 AKAIEKNKELFEQYKKDVTELLNKYSAL----------AIKNKFAKTKKDSEIIIKEIKDAHKKFilEAEKSEQK-IKEI 1574
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 719 QSKEFLWQLEDARQ-RYEQQIVELKLEHEQEKTHLLQQHNAEKDSlvRDHEREVENLENQLRA-----------ANMEHE 786
Cdd:TIGR01612 1575 KKEKFRIEDDAAKNdKSNKAAIDIQLSLENFENKFLKISDIKKKI--NDCLKETESIEKKISSfsidsqdtelkENGDNL 1652
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 787 NQIQ---ESKKRDAQVIADMEAQVHKLREEL----INVNSHRKQqlVELGLLRE-EEKQRAARDHETAVKKL-KAESERV 857
Cdd:TIGR01612 1653 NSLQeflESLKDQKKNIEDKKKELDELDSEIekieIDVDQHKKN--YEIGIIEKiKEIAIANKEEIESIKELiEPTIENL 1730
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1958657572 858 KMELKKT--HAAETEMTLEKANSRLKQIEKEYTqklaKSSQIIAELQTTISslKEESSRQQLAAER 921
Cdd:TIGR01612 1731 ISSFNTNdlEGIDPNEKLEEYNTEIGDIYEEFI----ELYNIIAGCLETVS--KEPITYDEIKNTR 1790
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
417-1030 |
2.80e-05 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 48.43 E-value: 2.80e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 417 LKKICEQSTESLNNDWEKKLHSAVAEMEKEKFELQKHHTETIQELLEDTNVRLSKMEGDYMVQTQSTNHMIKDLEGRVQQ 496
Cdd:TIGR00618 158 LKAKSKEKKELLMNLFPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQ 237
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 497 LMgEAENSNLQRQKLTQEKLELERCYQITCSELQELKTRQNLLHTEKEHL---------------VNDYEQNVKLLKTKY 561
Cdd:TIGR00618 238 TQ-QSHAYLTQKREAQEEQLKKQQLLKQLRARIEELRAQEAVLEETQERInrarkaaplaahikaVTQIEQQAQRIHTEL 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 562 DSDINILRQE--HALSTSKTSVVIEELEQNIRQLKQQVQESELQRKQQ--VKDQEDKFHMEKNHLKYIYEEKVHELKSE- 636
Cdd:TIGR00618 317 QSKMRSRAKLlmKRAAHVKQQSSIEEQRRLLQTLHSQEIHIRDAHEVAtsIREISCQQHTLTQHIHTLQQQKTTLTQKLq 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 637 -LDKEKEDAQRKIHKFE-EALKEKEEQLGRVTEVQRLQAQQADAALEEFKRQVEVTSEKvysdMKEQMEKVEADLSRSKS 714
Cdd:TIGR00618 397 sLCKELDILQREQATIDtRTSAFRDLQGQLAHAKKQQELQQRYAELCAAAITCTAQCEK----LEKIHLQESAQSLKERE 472
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 715 LREKQSKEFLWQLEDARQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSL---------------VRDHEREVENLENQL- 778
Cdd:TIGR00618 473 QQLQTKEQIHLQETRKKAVVLARLLELQEEPCPLCGSCIHPNPARQDIDnpgpltrrmqrgeqtYAQLETSEEDVYHQLt 552
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 779 -----RAANMEHENQIQESKKRDAQVIADMEAQVHKLREELINV------NSHRKQQLVELGLLREEEKQRAARDHETAV 847
Cdd:TIGR00618 553 serkqRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLqdltekLSEAEDMLACEQHALLRKLQPEQDLQDVRL 632
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 848 KKLKAESErvkMELKKTHAAETEMTLEKANSRLKQIEKEyTQKLAKSSQIIAELQttisslKEESSRQQLAAERRLQDVI 927
Cdd:TIGR00618 633 HLQQCSQE---LALKLTALHALQLTLTQERVREHALSIR-VLPKELLASRQLALQ------KMQSEKEQLTYWKEMLAQC 702
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 928 QKFEDEKQQLIRDNDQAIKALQDELETRSNQVRSAEKKLQHKELEAQEQMMYIRQEYETKFKGLMPASLRQELEDT-ISS 1006
Cdd:TIGR00618 703 QTLLRELETHIEEYDREFNEIENASSSLGSDLAAREDALNQSLKELMHQARTVLKARTEAHFNNNEEVTAALQTGAeLSH 782
|
650 660
....*....|....*....|....
gi 1958657572 1007 LKSQVNFLQKRASILQEELTTYQS 1030
Cdd:TIGR00618 783 LAAEIQFFNRLREEDTHLLKTLEA 806
|
|
| EzrA |
pfam06160 |
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like ... |
578-977 |
4.30e-05 |
|
Septation ring formation regulator, EzrA; During the bacterial cell cycle, the tubulin-like cell-division protein FtsZ polymerizes into a ring structure that establishes the location of the nascent division site. EzrA modulates the frequency and position of FtsZ ring formation. The structure contains 5 spectrin like alpha helical repeats.
Pssm-ID: 428797 [Multi-domain] Cd Length: 542 Bit Score: 47.54 E-value: 4.30e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 578 KTSVVIEELEQNIRQLKQQVQESeLQRKQQVKDQEDKFHMEKNHLKYIYEEkvheLKSELDkekedAQRkiHKFEEALKE 657
Cdd:pfam06160 83 KAKKALDEIEELLDDIEEDIKQI-LEELDELLESEEKNREEVEELKDKYRE----LRKTLL-----ANR--FSYGPAIDE 150
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 658 KEEQLgrvtevqrlqaqqaDAALEEFKRQVEVTSE-------KVYSDMKEQMEKVEADLSRSKSLREKQSKEFLWQLEDA 730
Cdd:pfam06160 151 LEKQL--------------AEIEEEFSQFEELTESgdylearEVLEKLEEETDALEELMEDIPPLYEELKTELPDQLEEL 216
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 731 RQRYEQQIVE-LKLEHEQEKTHLLQQHNAEKDSLVRDHEREVENLENQLRAAN---------MEHE----NQIQESKKRD 796
Cdd:pfam06160 217 KEGYREMEEEgYALEHLNVDKEIQQLEEQLEENLALLENLELDEAEEALEEIEeridqlydlLEKEvdakKYVEKNLPEI 296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 797 AQVIADMEAQVHKLREELinvnshrkQQLVELGLLREEEKQRaARDHETAVKKLKAESERVKMELKKTHAAETEMT--LE 874
Cdd:pfam06160 297 EDYLEHAEEQNKELKEEL--------ERVQQSYTLNENELER-VRGLEKQLEELEKRYDEIVERLEEKEVAYSELQeeLE 367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 875 KANSRLKQIEKEytqklakssqiIAELQTTISSL-KEESSRQQLAAE--RRLQDVIQKFE--------DEKQQLIRDNDQ 943
Cdd:pfam06160 368 EILEQLEEIEEE-----------QEEFKESLQSLrKDELEAREKLDEfkLELREIKRLVEksnlpglpESYLDYFFDVSD 436
|
410 420 430
....*....|....*....|....*....|....
gi 1958657572 944 AIKALQDELetrsNQVRSAEKKLQHKELEAQEQM 977
Cdd:pfam06160 437 EIEDLADEL----NEVPLNMDEVNRLLDEAQDDV 466
|
|
| HCR |
pfam07111 |
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha ... |
502-1017 |
4.66e-05 |
|
Alpha helical coiled-coil rod protein (HCR); This family consists of several mammalian alpha helical coiled-coil rod HCR proteins. The function of HCR is unknown but it has been implicated in psoriasis in humans and is thought to affect keratinocyte proliferation.
Pssm-ID: 284517 [Multi-domain] Cd Length: 749 Bit Score: 47.44 E-value: 4.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 502 ENSNLQRQKLTQEKLELE---RCYQITCSELQELKTRQNLLHTEKEHLVNDYEQNVKLLKTKYDSDINILRQEHALSTSK 578
Cdd:pfam07111 87 ETSLQQKMRLEAQAMELDalaVAEKAGQAEAEGLRAALAGAEMVRKNLEEGSQRELEEIQRLHQEQLSSLTQAHEEALSS 166
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 579 TSVVIEELEQN-----------IRQLKQQVQESELQRKQQVKDQED---KFHMEKNHLKYIYEEKVHELKSEldkEKEDA 644
Cdd:pfam07111 167 LTSKAEGLEKSlnsletkrageAKQLAEAQKEAELLRKQLSKTQEEleaQVTLVESLRKYVGEQVPPEVHSQ---TWELE 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 645 QRKIHKFEEALKEKEEQLGRVTEVQRLQAQQADAAL----EEFKRQVEVT-------SEKVYSDMKEQMEKVEADLSRSK 713
Cdd:pfam07111 244 RQELLDTMQHLQEDRADLQATVELLQVRVQSLTHMLalqeEELTRKIQPSdslepefPKKCRSLLNRWREKVFALMVQLK 323
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 714 SlREKQSKEFLWQLEDarqryeqQIVELkleheQEKTHLLQQHNAEKDSLVRDHEREVENLENQLRAANMEHeNQIQESK 793
Cdd:pfam07111 324 A-QDLEHRDSVKQLRG-------QVAEL-----QEQVTSQSQEQAILQRALQDKAAEVEVERMSAKGLQMEL-SRAQEAR 389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 794 KRDAQVIADMEAQvhkLREELINVNShrKQQLVELGLLREEEkqraardhetAVKKLKAESERVKMELKKTHAAETEMTL 873
Cdd:pfam07111 390 RRQQQQTASAEEQ---LKFVVNAMSS--TQIWLETTMTRVEQ----------AVARIPSLSNRLSYAVRKVHTIKGLMAR 454
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 874 EKAnsrLKQIEKEYTQKLAKSSQIIAELQTTISSLKEESSR----QQLAAERRLQDV---IQKFEDEKQQLIRDNDQAIK 946
Cdd:pfam07111 455 KVA---LAQLRQESCPPPPPAPPVDADLSLELEQLREERNRldaeLQLSAHLIQQEVgraREQGEAERQQLSEVAQQLEQ 531
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958657572 947 ALQDELETRSNQVRSAEKKLQHKElEAQEQMMYIRQEYeTKFKGLMPASLRQELEDTISSLKSQVNFLQKR 1017
Cdd:pfam07111 532 ELQRAQESLASVGQQLEVARQGQQ-ESTEEAASLRQEL-TQQQEIYGQALQEKVAEVETRLREQLSDTKRR 600
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
331-779 |
4.88e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 47.73 E-value: 4.88e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 331 EKELDMKTKMMEAKFSEekLKLQKKHDAEVQKILERKNNELEELKILYKKKQTETEeTVRKLEKKVQILIRDCQVIRETK 410
Cdd:TIGR00606 722 EKRRDEMLGLAPGRQSI--IDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLG-TIMPEEESAKVCLTDVTIMERFQ 798
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 411 ENQITELKKICEQSTESLNNDwekkLHSAVAEMEKEKFELQKHHTETIQELLEdtNVRLSKMEGDYMVQTQSTNHMIKDL 490
Cdd:TIGR00606 799 MELKDVERKIAQQAAKLQGSD----LDRTVQQVNQEKQEKQHELDTVVSKIEL--NRKLIQDQQEQIQHLKSKTNELKSE 872
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 491 EGRVQQLMGEAENSNLQRQKLTQEKLELERCYQITCSELQELKTRQNLLHTEKEHLVNDYEQNVKLLKTKYDSDINILRQ 570
Cdd:TIGR00606 873 KLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKVKN 952
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 571 EHALSTSKTSVVIEELEqniRQLKQQVQESELQRKQQVKDQEDKFHMEKNHLKYIYEEKVHELKSELDKEKEDAQRKIHK 650
Cdd:TIGR00606 953 IHGYMKDIENKIQDGKD---DYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTLRKRENE 1029
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 651 FEEALKEKEEQLGRVTEVQRLQAQQADAALEEFKRQVEVTSEKVYSDMKEQMEKVeadLSRSKSLREKqskeflwQLEDA 730
Cdd:TIGR00606 1030 LKEVEEELKQHLKEMGQMQVLQMKQEHQKLEENIDLIKRNHVLALGRQKGYEKEI---KHFKKELREP-------QFRDA 1099
|
410 420 430 440
....*....|....*....|....*....|....*....|....*....
gi 1958657572 731 RQRYEQQIVELKLEHEQEKThLLQQHNAEKDSLVRDHEREVENLENQLR 779
Cdd:TIGR00606 1100 EEKYREMMIVMRTTELVNKD-LDIYYKTLDQAIMKFHSMKMEEINKIIR 1147
|
|
| PspC_subgroup_1 |
NF033838 |
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, ... |
584-944 |
5.69e-05 |
|
pneumococcal surface protein PspC, choline-binding form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
Pssm-ID: 468201 [Multi-domain] Cd Length: 684 Bit Score: 47.32 E-value: 5.69e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 584 EELEQNIRQLKQQVQESeLQRKQQVKDQEDKFHMEKNHLKYIYEEKVHELKSELDKEKEDAQRKIHKFEEALKEKEEQLG 663
Cdd:NF033838 61 KEVESHLEKILSEIQKS-LDKRKHTQNVALNKKLSDIKTEYLYELNVLKEKSEAELTSKTKKELDAAFEQFKKDTLEPGK 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 664 RVTEVQRLQA---QQADAALEEFKRQVEVTSEKVYsdmkeQMEKVEADLSRSKSLREkqskefLWQLEDARQRYEQQI-- 738
Cdd:NF033838 140 KVAEATKKVEeaeKKAKDQKEEDRRNYPTNTYKTL-----ELEIAESDVEVKKAELE------LVKEEAKEPRDEEKIkq 208
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 739 VELKLEHEQEKTHLLQQHNAEKDSLVRDHEREVENLENQLRAANMEHENQiQESKKRDAQVIADMEAQVHKLREELINVN 818
Cdd:NF033838 209 AKAKVESKKAEATRLEKIKTDREKAEEEAKRRADAKLKEAVEKNVATSEQ-DKPKRRAKRGVLGEPATPDKKENDAKSSD 287
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 819 SHRKQQLVELGLLREEEK-QRAARDHETAVKKLKAESErvkmELKKTHAAETEMTLE----KANSRLKQIEKEYTQKLAK 893
Cdd:NF033838 288 SSVGEETLPSPSLKPEKKvAEAEKKVEEAKKKAKDQKE----EDRRNYPTNTYKTLEleiaESDVKVKEAELELVKEEAK 363
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....
gi 1958657572 894 SS---QIIAELQTTISSLKEESSRQQlaaerRLQDVIQKFEDEKQQLIRDNDQA 944
Cdd:NF033838 364 EPrneEKIKQAKAKVESKKAEATRLE-----KIKTDRKKAEEEAKRKAAEEDKV 412
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
365-1011 |
6.04e-05 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 47.35 E-value: 6.04e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 365 ERKNNEL----EELK---------ILYKKKQtETEETVRKLEKKVQILIRDCQ----VIRETKENQITELKKICEQSTES 427
Cdd:TIGR01612 992 EAKNNELikyfNDLKanlgknkenMLYHQFD-EKEKATNDIEQKIEDANKNIPnieiAIHTSIYNIIDEIEKEIGKNIEL 1070
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 428 LNNDWEKKLHSAVAEMEKEKFELqKHHTetIQELLEDTNVR----LSKMEGDYMVQTQSTNHMIKDLEgrvqQLMGEAEN 503
Cdd:TIGR01612 1071 LNKEILEEAEINITNFNEIKEKL-KHYN--FDDFGKEENIKyadeINKIKDDIKNLDQKIDHHIKALE----EIKKKSEN 1143
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 504 SnLQRQKLTQEKLELERCYQITCSELQELKTRQNLLHTEKEHLVNDYEQNVKLLK--TKYDSDINILRQEHALSTS---- 577
Cdd:TIGR01612 1144 Y-IDEIKAQINDLEDVADKAISNDDPEEIEKKIENIVTKIDKKKNIYDEIKKLLNeiAEIEKDKTSLEEVKGINLSygkn 1222
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 578 --------------KTSVVIEELEQNIRQLKQQVQESELQRKQQVKDQEDKFHMEKNHLKYIYEEKVHELKSELDKEKED 643
Cdd:TIGR01612 1223 lgklflekideekkKSEHMIKAMEAYIEDLDEIKEKSPEIENEMGIEMDIKAEMETFNISHDDDKDHHIISKKHDENISD 1302
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 644 AQRKIHKFEEALKEKEEQLGRVTEVQR--LQAQQADAALEEFKRQVEVTS--------EKVYSDMKEQMEKVE------- 706
Cdd:TIGR01612 1303 IREKSLKIIEDFSEESDINDIKKELQKnlLDAQKHNSDINLYLNEIANIYnilklnkiKKIIDEVKEYTKEIEennknik 1382
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 707 ADLSRSKSLREKQSKEFlwQLEDARQRYE-----QQIVELKLEHEQEKTHLLQQHnAEKDSLVRDHEREVENLENQLRAA 781
Cdd:TIGR01612 1383 DELDKSEKLIKKIKDDI--NLEECKSKIEstlddKDIDECIKKIKELKNHILSEE-SNIDTYFKNADENNENVLLLFKNI 1459
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 782 NMEHENQIQESKKRDAQVIADMEAQVHKLREELINVNSHR------KQQLVELGLLREEEKQRAA----RDHETAVK--- 848
Cdd:TIGR01612 1460 EMADNKSQHILKIKKDNATNDHDFNINELKEHIDKSKGCKdeadknAKAIEKNKELFEQYKKDVTellnKYSALAIKnkf 1539
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 849 -KLKAESERVKMELKKTHAAETeMTLEKANSRLKQIEKEY------TQKLAKSSQIIAELQTTISSLK---------EES 912
Cdd:TIGR01612 1540 aKTKKDSEIIIKEIKDAHKKFI-LEAEKSEQKIKEIKKEKfrieddAAKNDKSNKAAIDIQLSLENFEnkflkisdiKKK 1618
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 913 SRQQLAAERRLQDVIQKFE-DEKQQLIRDNDQAIKALQDELETRSNQVRSAE-KKLQHKELEAQEQMMYI-----RQEYE 985
Cdd:TIGR01612 1619 INDCLKETESIEKKISSFSiDSQDTELKENGDNLNSLQEFLESLKDQKKNIEdKKKELDELDSEIEKIEIdvdqhKKNYE 1698
|
730 740 750
....*....|....*....|....*....|
gi 1958657572 986 T----KFKGLMPASlRQELEDTISSLKSQV 1011
Cdd:TIGR01612 1699 IgiieKIKEIAIAN-KEEIESIKELIEPTI 1727
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
342-939 |
6.05e-05 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 46.98 E-value: 6.05e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 342 EAKFSEEKLKLQKKHDAEVQKILERKNNELEELKILYKKKQTETEETVRKLEkKVQILIRDCQVIRETKENQITELKKIc 421
Cdd:PRK03918 173 EIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELE-KLEKEVKELEELKEEIEELEKELESL- 250
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 422 EQSTESLNNDWeKKLHSAVAEMEKEKFELQKHHTEtIQEL--LEDTNVRLSKMEGDYMVQTQSTNHMIKDLEGR---VQQ 496
Cdd:PRK03918 251 EGSKRKLEEKI-RELEERIEELKKEIEELEEKVKE-LKELkeKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEingIEE 328
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 497 LMGEAENSNLQRQKLTQEKLELERcyqitcsELQELKTRQNLLHTEKEhLVNDYEQNVKLLKTKYDSDINILRQEHALST 576
Cdd:PRK03918 329 RIKELEEKEERLEELKKKLKELEK-------RLEELEERHELYEEAKA-KKEELERLKKRLTGLTPEKLEKELEELEKAK 400
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 577 SKTSVVIEELEQNIRQLKQQVQESELQ----RKQQVKDQEDKFHMEKNHLKYIYEEKVHELKsELDKEKEDAQRKIHKFE 652
Cdd:PRK03918 401 EEIEEEISKITARIGELKKEIKELKKAieelKKAKGKCPVCGRELTEEHRKELLEEYTAELK-RIEKELKEIEEKERKLR 479
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 653 EALKEKEEQLGRVTEVQRL-----QAQQADAALEEFKRQVEVTSEKVYSDMKEQMEKVEADLSRSKSLREKqskefLWQL 727
Cdd:PRK03918 480 KELRELEKVLKKESELIKLkelaeQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEK-----LEEL 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 728 EDARQRYEQQIVELklehEQEKTHLLQQHNAEKDSLVRDHEREVENLE----NQLRAANMEHENQIQESKkrdaqvIADM 803
Cdd:PRK03918 555 KKKLAELEKKLDEL----EEELAELLKELEELGFESVEELEERLKELEpfynEYLELKDAEKELEREEKE------LKKL 624
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 804 EAQVHKLREELINVNS---HRKQQLVELGLLREEEKQRAARDHETavkKLKAESERVKMELK--KTHAAETEMTLEKANS 878
Cdd:PRK03918 625 EEELDKAFEELAETEKrleELRKELEELEKKYSEEEYEELREEYL---ELSRELAGLRAELEelEKRREEIKKTLEKLKE 701
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958657572 879 RLKQIEK--EYTQKLAKSSQIIAELQTTISSLKEESSRQQLA-AERRLQDVIQKFEDEKQQLIR 939
Cdd:PRK03918 702 ELEEREKakKELEKLEKALERVEELREKVKKYKALLKERALSkVGEIASEIFEELTEGKYSGVR 765
|
|
| 46 |
PHA02562 |
endonuclease subunit; Provisional |
762-968 |
6.07e-05 |
|
endonuclease subunit; Provisional
Pssm-ID: 222878 [Multi-domain] Cd Length: 562 Bit Score: 46.93 E-value: 6.07e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 762 SLVRDHEREVENLENQLRAANME---HENQIQESKKRDAQVIADMEAQVHKLREELINVnshrKQQLVELG-----LLRE 833
Cdd:PHA02562 174 DKIRELNQQIQTLDMKIDHIQQQiktYNKNIEEQRKKNGENIARKQNKYDELVEEAKTI----KAEIEELTdellnLVMD 249
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 834 EEKQRAA-RDHETAVKKLKAESERVKMELK-----------KTHAAETEMTLEKANSRLKQIEKEYTQ---KLAKSSQII 898
Cdd:PHA02562 250 IEDPSAAlNKLNTAAAKIKSKIEQFQKVIKmyekggvcptcTQQISEGPDRITKIKDKLKELQHSLEKldtAIDELEEIM 329
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958657572 899 AELQTTISSLKE-----ESSRQQLAAER----RLQDVIQKFEDEKQqlirDNDQAIKALQDELETRSNQVRSAEKKLQH 968
Cdd:PHA02562 330 DEFNEQSKKLLElknkiSTNKQSLITLVdkakKVKAAIEELQAEFV----DNAEELAKLQDELDKIVKTKSELVKEKYH 404
|
|
| PRK00409 |
PRK00409 |
recombination and DNA strand exchange inhibitor protein; Reviewed |
656-876 |
7.84e-05 |
|
recombination and DNA strand exchange inhibitor protein; Reviewed
Pssm-ID: 234750 [Multi-domain] Cd Length: 782 Bit Score: 46.74 E-value: 7.84e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 656 KEKEEQLGRVTEVQRLQAQQADAALEEFKRQVevtsEKVYSDMKEQMEKVEAdlsrskslREKQSKeflwqlEDARQRYE 735
Cdd:PRK00409 515 KEKLNELIASLEELERELEQKAEEAEALLKEA----EKLKEELEEKKEKLQE--------EEDKLL------EEAEKEAQ 576
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 736 QQIVELKLEHEQEKTHLLQQHNAEKDSLVrdhEREVENLENQLRAANMEHENQIQESKKRDAQVIADMEAQVHKLRE--E 813
Cdd:PRK00409 577 QAIKEAKKEADEIIKELRQLQKGGYASVK---AHELIEARKRLNKANEKKEKKKKKQKEKQEELKVGDEVKYLSLGQkgE 653
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958657572 814 LINVNSHRKQQL--------VELGLLREEEKQRAARDHETAVKKLKAESERVKMELKKTHAAETEMTLEKA 876
Cdd:PRK00409 654 VLSIPDDKEAIVqagimkmkVPLSDLEKIQKPKKKKKKKPKTVKPKPRTVSLELDLRGMRYEEALERLDKY 724
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
630-967 |
8.00e-05 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 46.49 E-value: 8.00e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 630 VHELKSELDKEKEDAQRKIH--KFEEALKEKEEQLGRVTEVQRLQAQQADAALEEFKRQVEVTSEKVysdmKEQMEKVEA 707
Cdd:COG5185 232 EEALKGFQDPESELEDLAQTsdKLEKLVEQNTDLRLEKLGENAESSKRLNENANNLIKQFENTKEKI----AEYTKSIDI 307
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 708 DLSRSKSLREKQSKEFLWQLEDARQRYEQQIVELKLEHEQEKTHL---LQQHNAEKDSLVRDHEREvenlenqLRAANME 784
Cdd:COG5185 308 KKATESLEEQLAAAEAEQELEESKRETETGIQNLTAEIEQGQESLtenLEAIKEEIENIVGEVELS-------KSSEELD 380
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 785 HENQIQESKKRDAQVIadMEAQVHKLREELINVNSHRKQQLVELGLLREEEKQRAARDHETAVKKLKAESERVKMELKKT 864
Cdd:COG5185 381 SFKDTIESTKESLDEI--PQNQRGYAQEILATLEDTLKAADRQIEELQRQIEQATSSNEEVSKLLNELISELNKVMREAD 458
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 865 haaetEMTLEKANSRLKQIEKEYTQKLAKSSQIIAELQTTISSLKEESSRQQLAAERRLQDVIQKfedEKQQLIRDNDQA 944
Cdd:COG5185 459 -----EESQSRLEEAYDEINRSVRSKKEDLNEELTQIESRVSTLKATLEKLRAKLERQLEGVRSK---LDQVAESLKDFM 530
|
330 340
....*....|....*....|...
gi 1958657572 945 IKALQDELETRSNQVRSAEKKLQ 967
Cdd:COG5185 531 RARGYAHILALENLIPASELIQA 553
|
|
| Mitofilin |
pfam09731 |
Mitochondrial inner membrane protein; Mitofilin controls mitochondrial cristae morphology. ... |
592-974 |
8.96e-05 |
|
Mitochondrial inner membrane protein; Mitofilin controls mitochondrial cristae morphology. Mitofilin is enriched in the narrow space between the inner boundary and the outer membranes, where it forms a homotypic interaction and assembles into a large multimeric protein complex. The first 78 amino acids contain a typical amino-terminal-cleavable mitochondrial presequence rich in positive-charged and hydroxylated residues and a membrane anchor domain. In addition, it has three centrally located coiled coil domains.
Pssm-ID: 430783 [Multi-domain] Cd Length: 618 Bit Score: 46.29 E-value: 8.96e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 592 QLKQQVQESELQRKQQVKDQEDKFHMEKNHLKyiyEEKVHELKSELDKEKEDAQRKIHKFEEALKEKEEQLGRVTEVQrl 671
Cdd:pfam09731 88 QVKIPRQSGVSSEVAEEEKEATKDAAEAKAQL---PKSEQEKEKALEEVLKEAISKAESATAVAKEAKDDAIQAVKAH-- 162
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 672 qAQQADAALEEFKRQVEVTSEKVYSDMKEQMEKVEADLSRSKSLREKQSKEflwQLEDARQRYEQQIVELK-----LEHE 746
Cdd:pfam09731 163 -TDSLKEASDTAEISREKATDSALQKAEALAEKLKEVINLAKQSEEEAAPP---LLDAAPETPPKLPEHLDnveekVEKA 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 747 QEKTHLLQQHNAEKDSLVRDHEREVENLENQLRAANMEHENQiqeSKKRDAQVIADMEAQVHKLREELINvnshrkqqlv 826
Cdd:pfam09731 239 QSLAKLVDQYKELVASERIVFQQELVSIFPDIIPVLKEDNLL---SNDDLNSLIAHAHREIDQLSKKLAE---------- 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 827 elglLREEEKQRAARdhetAVKKLKAESERVKMELKKthAAETEMTLEKANSRLKQIEKEytQKLAKSSQiiaelqttiS 906
Cdd:pfam09731 306 ----LKKREEKHIER----ALEKQKEELDKLAEELSA--RLEEVRAADEAQLRLEFERER--EEIRESYE---------E 364
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1958657572 907 SLKEESSRQQLAAERRLQDVIqkfEDEKQQLIRDNDQAIK-ALQDELETRSNQVRSAEKKLqhKELEAQ 974
Cdd:pfam09731 365 KLRTELERQAEAHEEHLKDVL---VEQEIELQREFLQDIKeKVEEERAGRLLKLNELLANL--KGLEKA 428
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
493-935 |
9.83e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 46.30 E-value: 9.83e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 493 RVQQLMGEAENSNLQRQKLTQEKLELERCYQITCSELQELKTRQNLLHTEKEHLVNDYE-QNVKLLKTKYDSDINILRQE 571
Cdd:COG4717 75 ELEEELKEAEEKEEEYAELQEELEELEEELEELEAELEELREELEKLEKLLQLLPLYQElEALEAELAELPERLEELEER 154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 572 HAlstsktsvVIEELEQNIRQLKQQVQESELQRKQQVKDQEDKFHMEKNHLKYIYEEkVHELKSELDKEKEDAQRKIHKF 651
Cdd:COG4717 155 LE--------ELRELEEELEELEAELAELQEELEELLEQLSLATEEELQDLAEELEE-LQQRLAELEEELEEAQEELEEL 225
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 652 EEALKEKEEQLGRVTEVQRLQAQQADAAL------------EEFKRQVEVT----------------SEKVYSDMKEQME 703
Cdd:COG4717 226 EEELEQLENELEAAALEERLKEARLLLLIaaallallglggSLLSLILTIAgvlflvlgllallfllLAREKASLGKEAE 305
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 704 KVEAdLSRSKSLREKQSKEFLWQLEDARQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSLVRDHEREVENLenqLRAANM 783
Cdd:COG4717 306 ELQA-LPALEELEEEELEELLAALGLPPDLSPEELLELLDRIEELQELLREAEELEEELQLEELEQEIAAL---LAEAGV 381
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 784 EHENQIQEskkrdaqvIADMEAQVHKLREELINVNShrkqqlvelgLLREEEKQRAARDHETAVKKLKAESERVKMELKK 863
Cdd:COG4717 382 EDEEELRA--------ALEQAEEYQELKEELEELEE----------QLEELLGELEELLEALDEEELEEELEELEEELEE 443
|
410 420 430 440 450 460 470
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1958657572 864 THAAETEMTLEKA--NSRLKQIEKEytQKLAKSSQIIAELQTTISSLKEESSRQQLAAErRLQDVIQKFEDEKQ 935
Cdd:COG4717 444 LEEELEELREELAelEAELEQLEED--GELAELLQELEELKAELRELAEEWAALKLALE-LLEEAREEYREERL 514
|
|
| MAD |
pfam05557 |
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint ... |
371-967 |
1.89e-04 |
|
Mitotic checkpoint protein; This family consists of several eukaryotic mitotic checkpoint (Mitotic arrest deficient or MAD) proteins. The mitotic spindle checkpoint monitors proper attachment of the bipolar spindle to the kinetochores of aligned sister chromatids and causes a cell cycle arrest in prometaphase when failures occur. Multiple components of the mitotic spindle checkpoint have been identified in yeast and higher eukaryotes. In S.cerevisiae, the existence of a Mad1-dependent complex containing Mad2, Mad3, Bub3 and Cdc20 has been demonstrated.
Pssm-ID: 461677 [Multi-domain] Cd Length: 660 Bit Score: 45.50 E-value: 1.89e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 371 LEELKILYKKKQTETEETVRKLEKKVQILIRDCQVIRETKENQITELKKICEQSTESlnndwekklhsavAEMEKEKFEL 450
Cdd:pfam05557 11 LSQLQNEKKQMELEHKRARIELEKKASALKRQLDRESDRNQELQKRIRLLEKREAEA-------------EEALREQAEL 77
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 451 QKHHTETIQElledtnvrLSKMEGDYMVQTQSTNHMIKDLEGRVQQLMGEAENSNLQRQKLTQEKLELERcyqitcsELQ 530
Cdd:pfam05557 78 NRLKKKYLEA--------LNKKLNEKESQLADAREVISCLKNELSELRRQIQRAELELQSTNSELEELQE-------RLD 142
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 531 ELKTRqnllHTEKEHLVNDYEQNVKLLKTKyDSDINILRQEHALSTSKTSVVieeleQNIRQlkQQVQESELQRKQQVKD 610
Cdd:pfam05557 143 LLKAK----ASEAEQLRQNLEKQQSSLAEA-EQRIKELEFEIQSQEQDSEIV-----KNSKS--ELARIPELEKELERLR 210
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 611 QEDKFHMEKNHLKYIYEEKVHELKSELDKEkEDAQRKIHKFEealKEKEEQLGRVTEVQRLqAQQADAALeefkRQVEVT 690
Cdd:pfam05557 211 EHNKHLNENIENKLLLKEEVEDLKRKLERE-EKYREEAATLE---LEKEKLEQELQSWVKL-AQDTGLNL----RSPEDL 281
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 691 SEKVysdmkEQMEKVEADLSRSKSLREKQSKeflwQLEDARQRYEQQIVELKLEHEQEKTHLLQQHN----AEKDSLVRD 766
Cdd:pfam05557 282 SRRI-----EQLQQREIVLKEENSSLTSSAR----QLEKARRELEQELAQYLKKIEDLNKKLKRHKAlvrrLQRRVLLLT 352
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 767 HERE-----VENLENQLraANMEHENQIQESKKRDAQVI-------ADMEAQVHKLREELINVNSHRKQQLVELGLLREE 834
Cdd:pfam05557 353 KERDgyraiLESYDKEL--TMSNYSPQLLERIEEAEDMTqkmqahnEEMEAQLSVAEEELGGYKQQAQTLERELQALRQQ 430
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 835 EKQRAARDHETAVKKLKAESERVKMELKKTHAAETEMTLEKANSRLKQiekEYTQKLAKssqiIAELQTTISSLKEESSR 914
Cdd:pfam05557 431 ESLADPSYSKEEVDSLRRKLETLELERQRLREQKNELEMELERRCLQG---DYDPKKTK----VLHLSMNPAAEAYQQRK 503
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*..
gi 1958657572 915 QQLAAER----RLQDVIQKFEDEKQQLIRDNDQAIKALQDELETRSNQVRSAEKKLQ 967
Cdd:pfam05557 504 NQLEKLQaeieRLKRLLKKLEDDLEQVLRLPETTSTMNFKEVLDLRKELESAELKNQ 560
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
583-806 |
2.30e-04 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 44.82 E-value: 2.30e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 583 IEELEQNIRQLKQQVQESElqrkQQVKDQEDKfhMEKNhlkyiyEEKVHELKSELD---KEKEDAQRKIHKFEEALKEKE 659
Cdd:COG3883 18 IQAKQKELSELQAELEAAQ----AELDALQAE--LEEL------NEEYNELQAELEalqAEIDKLQAEIAEAEAEIEERR 85
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 660 EQLGrvtevQRLQAQQADAA-------------LEEFKRQVEVTSeKVYSDMKEQMEKVEADLsrsKSLREKQSkeflwQ 726
Cdd:COG3883 86 EELG-----ERARALYRSGGsvsyldvllgsesFSDFLDRLSALS-KIADADADLLEELKADK---AELEAKKA-----E 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 727 LEDARQRYEQQIVELKLEHEQekthlLQQHNAEKDSLVRDHEREVENLENQLRAANMEHENQIQESKKRDAQVIADMEAQ 806
Cdd:COG3883 152 LEAKLAELEALKAELEAAKAE-----LEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAA 226
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
729-976 |
2.48e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 44.75 E-value: 2.48e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 729 DARQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSL--VRDHEREVENLENQLRAANME---HENQIQESKKRDAQVIADM 803
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLkqLAALERRIAALARRIRALEQElaaLEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 804 EAQVHKLREELINVNSHRKQQLVELgLLREEEKQRAARdhetAVKKLKAESERVKMELKkthaaetemTLEKANSRLKQI 883
Cdd:COG4942 100 EAQKEELAELLRALYRLGRQPPLAL-LLSPEDFLDAVR----RLQYLKYLAPARREQAE---------ELRADLAELAAL 165
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 884 EKEYTQKLAKSSQIIAELQTtisslkeesSRQQLAAERrlqdviqkfeDEKQQLIRDNDQAIKALQDELETRSNQVRSAE 963
Cdd:COG4942 166 RAELEAERAELEALLAELEE---------ERAALEALK----------AERQKLLARLEKELAELAAELAELQQEAEELE 226
|
250
....*....|...
gi 1958657572 964 KKLQHKELEAQEQ 976
Cdd:COG4942 227 ALIARLEAEAAAA 239
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
582-1031 |
2.69e-04 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 44.96 E-value: 2.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 582 VIEELEQNIRQLKQQVQESELQRKQQVKDQEDKFHMEK---NHLKYIYEEKVHELKSELDKEKEDAQRKIHKF---EEAL 655
Cdd:TIGR00618 223 VLEKELKHLREALQQTQQSHAYLTQKREAQEEQLKKQQllkQLRARIEELRAQEAVLEETQERINRARKAAPLaahIKAV 302
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 656 KEKEEQLGRVTevQRLQAQQADAALEEFKRQVEVTSEkvySDMKEQMEKVEADLSRSKSLREKQSKEFLWQLEDARQRYE 735
Cdd:TIGR00618 303 TQIEQQAQRIH--TELQSKMRSRAKLLMKRAAHVKQQ---SSIEEQRRLLQTLHSQEIHIRDAHEVATSIREISCQQHTL 377
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 736 QQIVelkLEHEQEKTHLLQQHNAEKdSLVRDHEREVENLENQLRAANMEH------ENQIQESKKRDA--QVIADMEAQV 807
Cdd:TIGR00618 378 TQHI---HTLQQQKTTLTQKLQSLC-KELDILQREQATIDTRTSAFRDLQgqlahaKKQQELQQRYAElcAAAITCTAQC 453
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 808 HKLREELINVNSHRKQQLVELGLLREEEKQRAARDH--ETAVKKLKAESER-VKMELKKTHAAETEMTLEKAN-SRLKQI 883
Cdd:TIGR00618 454 EKLEKIHLQESAQSLKEREQQLQTKEQIHLQETRKKavVLARLLELQEEPCpLCGSCIHPNPARQDIDNPGPLtRRMQRG 533
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 884 EKEYT---QKLAKSSQIIAELQTTISSLKEESSR---------QQLAAERRLQDVIQKFEDEKQQLIRDNDQAIKALQDE 951
Cdd:TIGR00618 534 EQTYAqleTSEEDVYHQLTSERKQRASLKEQMQEiqqsfsiltQCDNRSKEDIPNLQNITVRLQDLTEKLSEAEDMLACE 613
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 952 LETrsnQVRSAEKKLQHKELEAQEQMMYIRQEYETKFKGLMPASLRQElEDTISSLKSQVNFLQKRASIlQEELTTYQSR 1031
Cdd:TIGR00618 614 QHA---LLRKLQPEQDLQDVRLHLQQCSQELALKLTALHALQLTLTQE-RVREHALSIRVLPKELLASR-QLALQKMQSE 688
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
349-967 |
2.92e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 45.01 E-value: 2.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 349 KLKLQKKHDAEVQKILERKNNELEELKILYKKKQTETEETVRKLEKKVQILIRDCQVIRETKENQITELKKiceqstesl 428
Cdd:TIGR04523 107 KINSEIKNDKEQKNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEELENELNL--------- 177
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 429 nndwekklhsavaeMEKEKFELQKHHTETIQELLEDtNVRLSKMegdymvqtQSTNHMIKDLEGRVQQLMGEAENSNLQR 508
Cdd:TIGR04523 178 --------------LEKEKLNIQKNIDKIKNKLLKL-ELLLSNL--------KKKIQKNKSLESQISELKKQNNQLKDNI 234
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 509 QKLTQEKLELERCYQITCSELQELKTRQNLLHTEKEHLVNDYEQNVKLLKTKYDSDINILRQEHALSTSKTSVVIEELEQ 588
Cdd:TIGR04523 235 EKKQQEINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNKELKS 314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 589 NIRQLKQQVQESELQRKQ------QVKDQEDKFHMEKNHLKYIYEEKVHELK---SELDKEKEDAQRKIHKFEEaLKEKE 659
Cdd:TIGR04523 315 ELKNQEKKLEEIQNQISQnnkiisQLNEQISQLKKELTNSESENSEKQRELEekqNEIEKLKKENQSYKQEIKN-LESQI 393
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 660 EQLGRVTEVQRLQAQQADAALEEFKRQVEVTsEKVYSDMKEQMEKVEA---DLSRSKSLREKQSKEflwqLEDARQRYEQ 736
Cdd:TIGR04523 394 NDLESKIQNQEKLNQQKDEQIKKLQQEKELL-EKEIERLKETIIKNNSeikDLTNQDSVKELIIKN----LDNTRESLET 468
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 737 QIVELKLEHEQEKTHLLQQhnaekdslvrdhEREVENLENQLraanmeheNQIQESKKRDAQVIADMEAQVHKLREELIN 816
Cdd:TIGR04523 469 QLKVLSRSINKIKQNLEQK------------QKELKSKEKEL--------KKLNEEKKELEEKVKDLTKKISSLKEKIEK 528
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 817 VNSHRKQQLVELGLLREEEKQRAARDHETAVKKLKAESERVKMELKkthaaETEMTLEKANSRLKQIEKEYTQKLAKSSQ 896
Cdd:TIGR04523 529 LESEKKEKESKISDLEDELNKDDFELKKENLEKEIDEKNKEIEELK-----QTQKSLKKKQEEKQELIDQKEKEKKDLIK 603
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958657572 897 IIAELQTTISSLKEESSRQQlAAERRLQDVIQKFEDEKQQLIrdndQAIKALQDELETRSNQVRSAEKKLQ 967
Cdd:TIGR04523 604 EIEEKEKKISSLEKELEKAK-KENEKLSSIIKNIKSKKNKLK----QEVKQIKETIKEIRNKWPEIIKKIK 669
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
587-1028 |
3.02e-04 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 44.63 E-value: 3.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 587 EQNIRQLKQQVQESELQRKQQVKDQEDKFHMEKNHLKY------IYEEKVHELKSELDKEK---EDAQRKIHKFEEALKE 657
Cdd:TIGR04523 35 EKQLEKKLKTIKNELKNKEKELKNLDKNLNKDEEKINNsnnkikILEQQIKDLNDKLKKNKdkiNKLNSDLSKINSEIKN 114
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 658 KEEQLGRV-TEVQRLQAQQADAALEEFKRQVEVTSEkvysdmKEQMEKVEADLSRSKSLREkQSKEFLWQLEDARQRYEQ 736
Cdd:TIGR04523 115 DKEQKNKLeVELNKLEKQKKENKKNIDKFLTEIKKK------EKELEKLNNKYNDLKKQKE-ELENELNLLEKEKLNIQK 187
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 737 QIVELKLEHEQEKTHL--LQQHNAEKDSLvrdhEREVENLENQlraanmehENQIQESKKRDAQVIADMEAQVHKLREEL 814
Cdd:TIGR04523 188 NIDKIKNKLLKLELLLsnLKKKIQKNKSL----ESQISELKKQ--------NNQLKDNIEKKQQEINEKTTEISNTQTQL 255
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 815 INVNSHRKQQLVELgllreEEKQRAARDHETAVKKLKAESERVKMELKKTHAAETEMTLEKANSRLKQIEKEYTQ---KL 891
Cdd:TIGR04523 256 NQLKDEQNKIKKQL-----SEKQKELEQNNKKIKELEKQLNQLKSEISDLNNQKEQDWNKELKSELKNQEKKLEEiqnQI 330
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 892 AKSSQIIAELQTTISSLKEESSRQQLAAErRLQDVIQKFEDEKQQLIRDNDQAIKALQDeLETRSNQVRSAEKKLQHKEL 971
Cdd:TIGR04523 331 SQNNKIISQLNEQISQLKKELTNSESENS-EKQRELEEKQNEIEKLKKENQSYKQEIKN-LESQINDLESKIQNQEKLNQ 408
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958657572 972 EAQEQMMYIRQEYETKFK--------GLMPASLRQELEDTISSLKSQVNFLQKRASILQEELTTY 1028
Cdd:TIGR04523 409 QKDEQIKKLQQEKELLEKeierlketIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVL 473
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
583-814 |
3.21e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.91 E-value: 3.21e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 583 IEELEQNIRQLKQQVQ-----ESELQRKQQVKDQEDKFHMEKNHLK-YIYEEKVHELKSELDKEKEDAQRKIHKFEEALK 656
Cdd:COG4913 237 LERAHEALEDAREQIEllepiRELAERYAAARERLAELEYLRAALRlWFAQRRLELLEAELEELRAELARLEAELERLEA 316
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 657 EKEEQLGRVTEVQRLQAQQADAALEEFKRQVEvtsekvysDMKEQMEKVEADLSRskslREKQSKEFLWQLEDARQRYEQ 736
Cdd:COG4913 317 RLDALREELDELEAQIRGNGGDRLEQLEREIE--------RLERELEERERRRAR----LEALLAALGLPLPASAEEFAA 384
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958657572 737 QIVELKLEHEQEKTHLLQQHNAekdslVRDHEREVENLENQLRAAnmehENQIQESKKRDaqviADMEAQVHKLREEL 814
Cdd:COG4913 385 LRAEAAALLEALEEELEALEEA-----LAEAEAALRDLRRELREL----EAEIASLERRK----SNIPARLLALRDAL 449
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
873-1031 |
4.18e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 44.24 E-value: 4.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 873 LEKANSRLKQIEKEYTQKLAKSSQIIAELQTTISSLK-EESSRQQLAAERRLQDVIQKFEDEKQQLIRDNDQAIKALQD- 950
Cdd:COG3206 184 LPELRKELEEAEAALEEFRQKNGLVDLSEEAKLLLQQlSELESQLAEARAELAEAEARLAALRAQLGSGPDALPELLQSp 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 951 ---ELETRSNQVRSAEKKLQHKELEAQEQMMYIRQEYETkfkglMPASLRQELEDTISSLKSQVNFLQKRASILQEELTT 1027
Cdd:COG3206 264 viqQLRAQLAELEAELAELSARYTPNHPDVIALRAQIAA-----LRAQLQQEAQRILASLEAELEALQAREASLQAQLAQ 338
|
....
gi 1958657572 1028 YQSR 1031
Cdd:COG3206 339 LEAR 342
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
583-967 |
4.92e-04 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 44.18 E-value: 4.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 583 IEELEQNIRQLKQQVQESElQRKQQVKDQEDKFH-MEKNHLkyiyEEKVHELKSELDkEKEDAQRKIHKFEEALKEKEEQ 661
Cdd:PRK04863 853 LADHESQEQQQRSQLEQAK-EGLSALNRLLPRLNlLADETL----ADRVEEIREQLD-EAEEAKRFVQQHGNALAQLEPI 926
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 662 LGRVTEVQ------RLQAQQADAALEEFKRQVEVTSEKV-------YSD--------------MKEQMEKVEADLSRSK- 713
Cdd:PRK04863 927 VSVLQSDPeqfeqlKQDYQQAQQTQRDAKQQAFALTEVVqrrahfsYEDaaemlaknsdlnekLRQRLEQAEQERTRARe 1006
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 714 SLREKQSK-----EFLWQLEDARQRYEQQIVELKLEheqekthlLQQHNAEKDslvrdherevENLENQLRAANMEHENQ 788
Cdd:PRK04863 1007 QLRQAQAQlaqynQVLASLKSSYDAKRQMLQELKQE--------LQDLGVPAD----------SGAEERARARRDELHAR 1068
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 789 IQESKKRDAQViadmEAQVHKLREELINVNSHRKQQLVELGLLREEEKQ---------RAARDHETAvKKLKAEservkm 859
Cdd:PRK04863 1069 LSANRSRRNQL----EKQLTFCEAEMDNLTKKLRKLERDYHEMREQVVNakagwcavlRLVKDNGVE-RRLHRR------ 1137
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 860 ELKKTHAAETEMTLEKANSRLKqiekeytqkLAKSSqiiAELQTTISSLKEESSRqqlaAERRLQ---DVIQKFEDE-KQ 935
Cdd:PRK04863 1138 ELAYLSADELRSMSDKALGALR---------LAVAD---NEHLRDVLRLSEDPKR----PERKVQfyiAVYQHLRERiRQ 1201
|
410 420 430
....*....|....*....|....*....|....
gi 1958657572 936 QLIRDND--QAIKALQDELETRSNQVRSAEKKLQ 967
Cdd:PRK04863 1202 DIIRTDDpvEAIEQMEIELSRLTEELTSREQKLA 1235
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
487-1025 |
5.26e-04 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 44.19 E-value: 5.26e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 487 IKDLEGRVQQLMGEAENSNLQRQKLTQEKLELERCYQITCSELQELKTRQNLLHTEKEHLVNDYEQNVKLLKTKYDSDIN 566
Cdd:pfam02463 179 IEETENLAELIIDLEELKLQELKLKEQAKKALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRDEQEEIESSKQ 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 567 IL----------RQEHALSTSKTSVVIEELEQNIRQLKQQVQESELQRKQQVKDQE-DKFHMEKNHLKYIYEEKVHELKS 635
Cdd:pfam02463 259 EIekeeeklaqvLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLERRKVDDEEkLKESEKEKKKAEKELKKEKEEIE 338
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 636 ELDKEKEDAQRKIHKFEEALKEKEEQlgrvtevQRLQAQQADAALEEFKRQVEVTSEKVySDMKEQMEKVEADLSRSKSL 715
Cdd:pfam02463 339 ELEKELKELEIKREAEEEEEEELEKL-------QEKLEQLEEELLAKKKLESERLSSAA-KLKEEELELKSEEEKEAQLL 410
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 716 REKQSKEFLWQLEDARQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSLVRDHEREVENLENQLRAANMEHENQIQESKKR 795
Cdd:pfam02463 411 LELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVKLQEQLELLL 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 796 DAQVIADMEAQVHKLREELiNVNSHRKQQLVELGLLREEEKQRAARDHETAVKKLK-----AESERVKMELKKTHAAETE 870
Cdd:pfam02463 491 SRQKLEERSQKESKARSGL-KVLLALIKDGVGGRIISAHGRLGDLGVAVENYKVAIstaviVEVSATADEVEERQKLVRA 569
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 871 MTLEKANSRLKQIEKEYTQKLAKSSQIIAELQTTISSLKEEssRQQLAAERRLQDVIQKFEDEKQQLIRDNDQAIKALQD 950
Cdd:pfam02463 570 LTELPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDK--ATLEADEDDKRAKVVEGILKDTELTKLKESAKAKESG 647
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958657572 951 ELETRSNQVRSAEKKLQHKELEAQEQMMYIRQEYETKFKGLMPASLRQELEDTISSLKSQVNFLQKRASILQEEL 1025
Cdd:pfam02463 648 LRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQREKEELKKLKLEAEEL 722
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
507-791 |
5.34e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.14 E-value: 5.34e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 507 QRQKLTQEKLELERCYQITCSELQELKTRQNLLHTEKEHL-----VNDYEQNVKLLKTKYDSdiniLRQEHAlSTSKTSV 581
Cdd:COG4913 611 KLAALEAELAELEEELAEAEERLEALEAELDALQERREALqrlaeYSWDEIDVASAEREIAE----LEAELE-RLDASSD 685
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 582 VIEELEQNIRQLKQQVQESELQRKQQVKDQedkfhmeknhlkyiyeekvhelkSELDKEKEDAQRKIHKFEEALkEKEEQ 661
Cdd:COG4913 686 DLAALEEQLEELEAELEELEEELDELKGEI-----------------------GRLEKELEQAEEELDELQDRL-EAAED 741
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 662 LGRVTEVQRLQAQQADAALEEFKRQVevtsekvysdmkeqMEKVEADLSRSKSLREKQSKEFLWQLEDARQRYEQQIVEL 741
Cdd:COG4913 742 LARLELRALLEERFAAALGDAVEREL--------------RENLEERIDALRARLNRAEEELERAMRAFNREWPAETADL 807
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958657572 742 -----------KLEHEQEKTHLLQQHNAEKDSLVRDHEREVENLENQLRAANMEHENQIQE 791
Cdd:COG4913 808 dadleslpeylALLDRLEEDGLPEYEERFKELLNENSIEFVADLLSKLRRAIREIKERIDP 868
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
568-780 |
5.68e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.85 E-value: 5.68e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 568 LRQEHALSTSKTSVVIEELEQNIRQLKQQVQESElQRKQQVKDQEDKFHMEKNHLkyIYEEKVHELKSELDK---EKEDA 644
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPELRKELEEAE-AALEEFRQKNGLVDLSEEAK--LLLQQLSELESQLAEaraELAEA 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 645 QRKIHKFEEALKEKEEQLGRVTEVQRLqaQQADAALEEFKRQVEVTSEKvYSDMKEQMEKVEADLSRSKSLREKQSKEFL 724
Cdd:COG3206 239 EARLAALRAQLGSGPDALPELLQSPVI--QQLRAQLAELEAELAELSAR-YTPNHPDVIALRAQIAALRAQLQQEAQRIL 315
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|....*.
gi 1958657572 725 WQLEDARQRYEQQIVELKLEHEQEKTHLLQQHNAEKDslVRDHEREVENLENQLRA 780
Cdd:COG3206 316 ASLEAELEALQAREASLQAQLAQLEARLAELPELEAE--LRRLEREVEVARELYES 369
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
797-1025 |
5.75e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 5.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 797 AQVIADMEAQVHKLREELINVNSHRKQQLVElgllrEEEKQRAARDHETAVKKLKAESERVKMELkkthaAETEMTLEKA 876
Cdd:COG4942 19 ADAAAEAEAELEQLQQEIAELEKELAALKKE-----EKALLKQLAALERRIAALARRIRALEQEL-----AALEAELAEL 88
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 877 NSRLKQIEKEYTQKLAKSSQIIAELQTT--ISSLKEESSRQQLAAERRLQDVIQKFEDEKQQLIrdndQAIKALQDELET 954
Cdd:COG4942 89 EKEIAELRAELEAQKEELAELLRALYRLgrQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQA----EELRADLAELAA 164
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958657572 955 RSNQVRSAEKKLQHKELEAQEQMMYIRQEYETKfkglmpASLRQELEDTISSLKSQVNFLQKRASILQEEL 1025
Cdd:COG4942 165 LRAELEAERAELEALLAELEEERAALEALKAER------QKLLARLEKELAELAAELAELQQEAEELEALI 229
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
584-967 |
5.79e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 43.88 E-value: 5.79e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 584 EELEQNIRQLKQQVQESELQRKQQVKDQEDkfHMEKNhlkyiyeEKVHELKSELDKEKEDAQRKIHKFEEALKEKEEQLg 663
Cdd:PRK02224 324 EELRDRLEECRVAAQAHNEEAESLREDADD--LEERA-------EELREEAAELESELEEAREAVEDRREEIEELEEEI- 393
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 664 rvtEVQRLQAQQADAALEEFK-RQVEVTSEKvySDMKEQMEKVEADLsrsKSLREKqskeflwqLEDARQRYEQ------ 736
Cdd:PRK02224 394 ---EELRERFGDAPVDLGNAEdFLEELREER--DELREREAELEATL---RTARER--------VEEAEALLEAgkcpec 457
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 737 -QIVElkleheqEKTHLlqQHNAEKDSLVRDHEREVENLENQLRAANMEHENqiqeskkrdAQVIADMEAQVHKLREELI 815
Cdd:PRK02224 458 gQPVE-------GSPHV--ETIEEDRERVEELEAELEDLEEEVEEVEERLER---------AEDLVEAEDRIERLEERRE 519
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 816 NVNSHRKQQ--LVELGLLREEEKQRAARDHETavkklKAESERVKMELKKTHAAETEMTLEKANSRLKQI--EKEYTQKL 891
Cdd:PRK02224 520 DLEELIAERreTIEEKRERAEELRERAAELEA-----EAEEKREAAAEAEEEAEEAREEVAELNSKLAELkeRIESLERI 594
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 892 AKSSQIIAELQTTISSLKE---------ESSRQQLAAER-RLQDVIQKFEDEKQQLIRDNDQAIKALQDELETRSNQVRS 961
Cdd:PRK02224 595 RTLLAAIADAEDEIERLREkrealaelnDERRERLAEKReRKRELEAEFDEARIEEAREDKERAEEYLEQVEEKLDELRE 674
|
....*.
gi 1958657572 962 AEKKLQ 967
Cdd:PRK02224 675 ERDDLQ 680
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
768-977 |
8.77e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.47 E-value: 8.77e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 768 EREVENLENQLRAANMEHE-NQIQESKKRDAQVIADMEAQVHKLREELINVNShRKQQLVELGLLREEEKQRAARDheTA 846
Cdd:COG3206 188 RKELEEAEAALEEFRQKNGlVDLSEEAKLLLQQLSELESQLAEARAELAEAEA-RLAALRAQLGSGPDALPELLQS--PV 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 847 VKKLKAESERVKMELkkthaAETEMTLEKANSRLKQIEKEYtqklaksSQIIAELQTTISSLKEESSRQQLAAERRLQDV 926
Cdd:COG3206 265 IQQLRAQLAELEAEL-----AELSARYTPNHPDVIALRAQI-------AALRAQLQQEAQRILASLEAELEALQAREASL 332
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|...
gi 1958657572 927 IQKFEDEKQQLIRDNDQAIK--ALQDELETRSNQVRSAEKKLQhkELEAQEQM 977
Cdd:COG3206 333 QAQLAQLEARLAELPELEAElrRLEREVEVARELYESLLQRLE--EARLAEAL 383
|
|
| HEC1 |
COG5185 |
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell ... |
787-1026 |
1.05e-03 |
|
Chromosome segregation protein NDC80, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 444066 [Multi-domain] Cd Length: 594 Bit Score: 43.02 E-value: 1.05e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 787 NQIQESKKRDAQVIADMEAQVHKLREELinvnSHRKQQLVELGLLREEEKQRAARDHETAVKKLKAESE----RVKMELK 862
Cdd:COG5185 271 GENAESSKRLNENANNLIKQFENTKEKI----AEYTKSIDIKKATESLEEQLAAAEAEQELEESKRETEtgiqNLTAEIE 346
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 863 KTHAAETEmTLEKANSRLKQIEKEYtqKLAKSSQIIAELQTTISSLKEESSRQQLAAERRLQDVIQKFEDEKQQLIRDND 942
Cdd:COG5185 347 QGQESLTE-NLEAIKEEIENIVGEV--ELSKSSEELDSFKDTIESTKESLDEIPQNQRGYAQEILATLEDTLKAADRQIE 423
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 943 Q---AIKALQDELETRSNQVRSAEKKLQHKELEAQEQMMyIRQEYETKFKGLMPASLRQELEDTISSLKSQVNFLQKRAS 1019
Cdd:COG5185 424 ElqrQIEQATSSNEEVSKLLNELISELNKVMREADEESQ-SRLEEAYDEINRSVRSKKEDLNEELTQIESRVSTLKATLE 502
|
....*..
gi 1958657572 1020 ILQEELT 1026
Cdd:COG5185 503 KLRAKLE 509
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
359-959 |
1.17e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 43.12 E-value: 1.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 359 EVQKILERKN------NELEELKILYKKKqtetEETVRKLEKKVQILIrdcqvIRETKENQITELKKICEQSTESLNNDW 432
Cdd:TIGR01612 390 EIKKIAKQRAiffynaKKLKHLEILYKHQ----EDILNNFHKTIERLI-----FEKPDPNNNNIFKDDFDEFNKPIPKSK 460
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 433 EKKLHSAVAEMEKEKFELQKHHTETIQELLEDTNVRL------------SKMEGDYMVQTQSTNHMIKDLEGRVQQLM-G 499
Cdd:TIGR01612 461 LKALEKRFFEIFEEEWGSYDIKKDIDENSKQDNTVKLilmrmkdfkdiiDFMELYKPDEVPSKNIIGFDIDQNIKAKLyK 540
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 500 EAENSNLQRQKLTQ--EKLELErcyqiTCSELQELKTRQNLLHTEKEHLVNDY----EQNVKLLKTKYDSDINILRQEHA 573
Cdd:TIGR01612 541 EIEAGLKESYELAKnwKKLIHE-----IKKELEEENEDSIHLEKEIKDLFDKYleidDEIIYINKLKLELKEKIKNISDK 615
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 574 LSTSKTSVVIEEL-EQNIRQLKQQVQESELQRKQQVKDQEDKFHMEKNHLKYIYEEKVHELKSEL-------------DK 639
Cdd:TIGR01612 616 NEYIKKAIDLKKIiENNNAYIDELAKISPYQVPEHLKNKDKIYSTIKSELSKIYEDDIDALYNELssivkenaidnteDK 695
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 640 EK-EDAQRKIHKFEEALK----------------EKEEQLGRVTEVQRL----QAQQADAALEEFKRQVEVTSEKV--YS 696
Cdd:TIGR01612 696 AKlDDLKSKIDKEYDKIQnmetatvelhlsnienKKNELLDIIVEIKKHihgeINKDLNKILEDFKNKEKELSNKIndYA 775
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 697 DMKEQMEKVEADLSRSKSLREKQSKEFLWQLEDARQRYEQQIVELKL--EHEQEKTHLLQQHNAEKDSLVRDHEREVeNL 774
Cdd:TIGR01612 776 KEKDELNKYKSKISEIKNHYNDQINIDNIKDEDAKQNYDKSKEYIKTisIKEDEIFKIINEMKFMKDDFLNKVDKFI-NF 854
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 775 ENQLRA-ANMEHENQIQESKKRDAQV----IADMEAQVHKLREELINVNSHRKQQLVELGLLRE-EEKQRAARDHETAVK 848
Cdd:TIGR01612 855 ENNCKEkIDSEHEQFAELTNKIKAEIsddkLNDYEKKFNDSKSLINEINKSIEEEYQNINTLKKvDEYIKICENTKESIE 934
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 849 KLKAESERVKMELKKTHAaetemTLEKANSrlkqIEKEYTQKLAKS-SQIIAELQTTISSLKEESSrqqlaaERRLQDVI 927
Cdd:TIGR01612 935 KFHNKQNILKEILNKNID-----TIKESNL----IEKSYKDKFDNTlIDKINELDKAFKDASLNDY------EAKNNELI 999
|
650 660 670
....*....|....*....|....*....|..
gi 1958657572 928 QKFEDEKQQLIRDNDQAIKALQDELETRSNQV 959
Cdd:TIGR01612 1000 KYFNDLKANLGKNKENMLYHQFDEKEKATNDI 1031
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
643-816 |
1.27e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 42.98 E-value: 1.27e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 643 DAQRKIHKFEEALKEKEEQLGRVTE-VQRLQAQQA--DAALEEFKRQVEVTSEKV--------YSDMKEQMEKVEADLSR 711
Cdd:COG4913 607 DNRAKLAALEAELAELEEELAEAEErLEALEAELDalQERREALQRLAEYSWDEIdvasaereIAELEAELERLDASSDD 686
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 712 SKSLREKQSkeflwQLEDARQRYEQQIVELKLE---HEQEKTHLLQQHNAEKDSLVRDHEREV----ENLENQLRAANME 784
Cdd:COG4913 687 LAALEEQLE-----ELEAELEELEEELDELKGEigrLEKELEQAEEELDELQDRLEAAEDLARlelrALLEERFAAALGD 761
|
170 180 190
....*....|....*....|....*....|...
gi 1958657572 785 -HENQIQESKKRDaqvIADMEAQVHKLREELIN 816
Cdd:COG4913 762 aVERELRENLEER---IDALRARLNRAEEELER 791
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
433-992 |
1.32e-03 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 42.90 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 433 EKKLHSAVAEMEKEKFELQKHHTETIQELLEDTNVRLSKMEGDYmvqtQSTNHMIKDLEGRVQQLmgeaENSNLQRQKLT 512
Cdd:pfam12128 274 IASRQEERQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAV----AKDRSELEALEDQHGAF----LDADIETAAAD 345
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 513 QEKLELERcyqitcSELQELKTRQNLLHTEKEHLVNDYEQNVKLLKTKYDSDINILRQEHALSTSKTSVVIEELEQNIRQ 592
Cdd:pfam12128 346 QEQLPSWQ------SELENLEERLKALTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQLAVAEDDLQA 419
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 593 LKQQVQESELQRKQQVKDQEDKFHMEKNHLKY----------------IYEEKVHELKSELD---KEKEDAQRKIHKFEE 653
Cdd:pfam12128 420 LESELREQLEAGKLEFNEEEYRLKSRLGELKLrlnqatatpelllqleNFDERIERAREEQEaanAEVERLQSELRQARK 499
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 654 ALKEKEEQLGRvtEVQRLQAQQadAALEEFKRQVEVTS-------EKVYSDMKEQMEKV--EADLSRSK----------- 713
Cdd:pfam12128 500 RRDQASEALRQ--ASRRLEERQ--SALDELELQLFPQAgtllhflRKEAPDWEQSIGKVisPELLHRTDldpevwdgsvg 575
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 714 ----------SLREKQSKEFLWQLEDARQRYEQQIVELKLEHE--QEKTHLLQQHNAEKDSLVRDHEREVENLEN---QL 778
Cdd:pfam12128 576 gelnlygvklDLKRIDVPEWAASEEELRERLDKAEEALQSAREkqAAAEEQLVQANGELEKASREETFARTALKNarlDL 655
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 779 RAANMEHEN-------QIQESKKRDAQVIADMEAQVHKLREELINVNSHRKQQLVELGLLREEEKQraardheTAVKKLK 851
Cdd:pfam12128 656 RRLFDEKQSekdkknkALAERKDSANERLNSLEAQLKQLDKKHQAWLEEQKEQKREARTEKQAYWQ-------VVEGALD 728
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 852 AESERVKMELKKTHAAetemtlekANSRLKQIEKEYTQKLAK---SSQIIAELQTTISSL--KEESSRQQLAAERRLQDV 926
Cdd:pfam12128 729 AQLALLKAAIAARRSG--------AKAELKALETWYKRDLASlgvDPDVIAKLKREIRTLerKIERIAVRRQEVLRYFDW 800
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 927 IQ-KFEDEKQQL---IRDNDQAIKALQDELETRSNQVRSAEKKLQhKELEAQEQMMYIRQEYETKFKGLM 992
Cdd:pfam12128 801 YQeTWLQRRPRLatqLSNIERAISELQQQLARLIADTKLRRAKLE-MERKASEKQQVRLSENLRGLRCEM 869
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
584-922 |
1.68e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 42.63 E-value: 1.68e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 584 EELEQNIRQLKQQVQESE--LQRKQQVKDQEDKFHMEKNHLKYIYE--EKVHELKSELDKEKEDAQRKIHKFEEALKEKE 659
Cdd:COG3096 316 EELSARESDLEQDYQAASdhLNLVQTALRQQEKIERYQEDLEELTErlEEQEEVVEEAAEQLAEAEARLEAAEEEVDSLK 395
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 660 EQLG---RVTEVQR---LQAQQADAALEEFKRQV---EVTSEKVYSDMKEQMEKVEADLSRSKSLREKQSKEflwqlEDA 730
Cdd:COG3096 396 SQLAdyqQALDVQQtraIQYQQAVQALEKARALCglpDLTPENAEDYLAAFRAKEQQATEEVLELEQKLSVA-----DAA 470
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 731 RQRYEQ--QIVELKLEH-----------EQEKTHLLQQHNAEKDSLVRDHEREVENLENQLRAAnmehENQIQESKKRDA 797
Cdd:COG3096 471 RRQFEKayELVCKIAGEversqawqtarELLRRYRSQQALAQRLQQLRAQLAELEQRLRQQQNA----ERLLEEFCQRIG 546
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 798 QVIADMEaQVHKLREELinvnshrKQQLVELGLLREEEKQRAARdhetavkkLKAESERVKMELKKThaAETEMTLEKAN 877
Cdd:COG3096 547 QQLDAAE-ELEELLAEL-------EAQLEELEEQAAEAVEQRSE--------LRQQLEQLRARIKEL--AARAPAWLAAQ 608
|
330 340 350 360
....*....|....*....|....*....|....*....|....*.
gi 1958657572 878 SRLKQIEKEYTQKLAKSSQIIAELQTTISSLKE-ESSRQQLAAERR 922
Cdd:COG3096 609 DALERLREQSGEALADSQEVTAAMQQLLEREREaTVERDELAARKQ 654
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
548-989 |
1.75e-03 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 42.44 E-value: 1.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 548 NDYEQNVKLLKTKYDSDINILRQEhalsTSKTSVVIEELEQNIRQLKQQVQES----ELQRKQQVKDQEDKFHMEKNHLK 623
Cdd:PTZ00121 1079 FDFDAKEDNRADEATEEAFGKAEE----AKKTETGKAEEARKAEEAKKKAEDArkaeEARKAEDARKAEEARKAEDAKRV 1154
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 624 YIYEEKVHELKSELDKEKEDAQRkihkFEEAlkEKEEQLGRVTEVQRLQAQQADAALEEFKRQVEVTSEKVYSDMKEQME 703
Cdd:PTZ00121 1155 EIARKAEDARKAEEARKAEDAKK----AEAA--RKAEEVRKAEELRKAEDARKAEAARKAEEERKAEEARKAEDAKKAEA 1228
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 704 KVEADLSRSKSLREKQSKEflwqledarqryEQQIVELKLEHEQEKTHLLQQHNAEKDSLVR--DHEREVENLENQLRAA 781
Cdd:PTZ00121 1229 VKKAEEAKKDAEEAKKAEE------------ERNNEEIRKFEEARMAHFARRQAAIKAEEARkaDELKKAEEKKKADEAK 1296
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 782 NMEHENQIQESKKRdaqviadmeAQVHKLREELINVNSHRKQQLVELGLLREEEKQR---AARDHETAVKKLKAESERVK 858
Cdd:PTZ00121 1297 KAEEKKKADEAKKK---------AEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAaeaAKAEAEAAADEAEAAEEKAE 1367
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 859 MELKKTHAAETEMTLEKANSRLKQIEKEYTQKLAKSSQIIAELQTTISSLKEESSRQQLAAERRLQDVIQKFEDEKQ--- 935
Cdd:PTZ00121 1368 AAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKkad 1447
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1958657572 936 QLIRDNDQAIKALQ-----------DELETRSNQVRSAEkKLQHKELEAQEQMMYIRQEYETKFK 989
Cdd:PTZ00121 1448 EAKKKAEEAKKAEEakkkaeeakkaDEAKKKAEEAKKAD-EAKKKAEEAKKKADEAKKAAEAKKK 1511
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
484-1023 |
1.85e-03 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 42.37 E-value: 1.85e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 484 NHMIKDLEGRVQQLMGEAENsNLQ---RQKLTQEKLELERCYQITCSELQE-LKTRQNLlhteKEHLvndYEQNVKLLKT 559
Cdd:COG5022 730 AGVLAALEDMRDAKLDNIAT-RIQraiRGRYLRRRYLQALKRIKKIQVIQHgFRLRRLV----DYEL---KWRLFIKLQP 801
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 560 KYDSDINILRQEHALSTsktsvvIEELEQNIRQLKQQVQESElqrkqqvkdQEDKFHMEKNHLKYIYEEKVHELKSELDK 639
Cdd:COG5022 802 LLSLLGSRKEYRSYLAC------IIKLQKTIKREKKLRETEE---------VEFSLKAEVLIQKFGRSLKAKKRFSLLKK 866
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 640 EK--EDAQRKIHKFEEALKEKEEQLGRVTEVqRLQAQQADAALEEFKRQVEvTSEKVYSDMKEQMEKVEADLSRSKSLRE 717
Cdd:COG5022 867 ETiyLQSAQRVELAERQLQELKIDVKSISSL-KLVNLELESEIIELKKSLS-SDLIENLEFKTELIARLKKLLNNIDLEE 944
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 718 KQSKEflwqledarqrYEQQIVELKLeHEQEKThlLQQHNAEKDSLVRDHEreveNLENQLRAANMEHENQIQESKKRDA 797
Cdd:COG5022 945 GPSIE-----------YVKLPELNKL-HEVESK--LKETSEEYEDLLKKST----ILVREGNKANSELKNFKKELAELSK 1006
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 798 QVIAdMEAQVHKLREEliNVNSHRKQQLVELGLLREEEKQRaardhETAVKKLKAESERVKMELKKTHAAeteMTLEKAN 877
Cdd:COG5022 1007 QYGA-LQESTKQLKEL--PVEVAELQSASKIISSESTELSI-----LKPLQKLKGLLLLENNQLQARYKA---LKLRREN 1075
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 878 SRLKQIEKEYTQK---LAKSSQIIAELQTTISSLKEESSRQQLAAER---RLQDVIQKFEDEKQQLIRDNDQAIKALQDE 951
Cdd:COG5022 1076 SLLDDKQLYQLEStenLLKTINVKDLEVTNRNLVKPANVLQFIVAQMiklNLLQEISKFLSQLVNTLEPVFQKLSVLQLE 1155
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1958657572 952 LETRSNQVRSAEKKLQHKELEAQEQMMYIRQEYETKFKGLmpASLRQELEDTISSLKSQVNFLQKRASILQE 1023
Cdd:COG5022 1156 LDGLFWEANLEALPSPPPFAALSEKRLYQSALYDEKSKLS--SSEVNDLKNELIALFSKIFSGWPRGDKLKK 1225
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
545-917 |
1.92e-03 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 42.20 E-value: 1.92e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 545 HLVNDYEQNVKLLKTKYDSDINiLRQEHALSTSKTSVVIEELEQNIRQLKQQVQESELQRKQQVKDQ-EDKFHMEKNHLK 623
Cdd:PLN02939 64 KLQSNTDENGQLENTSLRTVME-LPQKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEQLSDFQlEDLVGMIQNAEK 142
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 624 YIY---EEKVHELKsELDK---EKEDAQRKIHKFEEALKEKEEQLGRVTEVQrLQAQQADAALEEFKRqvEVTSEKVYSD 697
Cdd:PLN02939 143 NILllnQARLQALE-DLEKiltEKEALQGKINILEMRLSETDARIKLAAQEK-IHVEILEEQLEKLRN--ELLIRGATEG 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 698 MKEQMEKVEADLSRSKSLREKQSKEFLWQLEDARQRYEQQIVELKLEH--------EQEKTHLLQQHNAEK-DSLVRDHE 768
Cdd:PLN02939 219 LCVHSLSKELDVLKEENMLLKDDIQFLKAELIEVAETEERVFKLEKERslldaslrELESKFIVAQEDVSKlSPLQYDCW 298
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 769 RE-VENLENQLRAANMEHENQIQESKKRDaqviaDMEAQVHKLREELinvnshrkqqlvelgllreeekqraardHETAV 847
Cdd:PLN02939 299 WEkVENLQDLLDRATNQVEKAALVLDQNQ-----DLRDKVDKLEASL----------------------------KEANV 345
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 848 KKLkaESERVKMELKKTHAAEtemtlekanSRLKQIEKEYTQKLAKSSQIIAELQTTISSLKEESSRQQL 917
Cdd:PLN02939 346 SKF--SSYKVELLQQKLKLLE---------ERLQASDHEIHSYIQLYQESIKEFQDTLSKLKEESKKRSL 404
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
834-1032 |
3.35e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.90 E-value: 3.35e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 834 EEKQRAARDHETAVKKLKAESERVKMELKKTHAAETEM-TLEKANSRLKQIEKEYTQKLAKSSQIIAELQTTISSLKEES 912
Cdd:COG4942 20 DAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLaALERRIAALARRIRALEQELAALEAELAELEKEIAELRAEL 99
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 913 SRQQLAAERRLQdVIQKFE-----------DEKQQLIRdNDQAIKALQDELETRSNQVRSAEKKLQHKELEAQEQmmyiR 981
Cdd:COG4942 100 EAQKEELAELLR-ALYRLGrqpplalllspEDFLDAVR-RLQYLKYLAPARREQAEELRADLAELAALRAELEAE----R 173
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|.
gi 1958657572 982 QEYETKFKGLmpASLRQELEDTISSLKSQVNFLQKRASILQEELTTYQSRR 1032
Cdd:COG4942 174 AELEALLAEL--EEERAALEALKAERQKLLARLEKELAELAAELAELQQEA 222
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
500-972 |
3.70e-03 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 41.43 E-value: 3.70e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 500 EAENSNLQRQKLTQEKLELERCYQITCSELQELKTRQNLLHTEKEHLVNDYEQNVKLLKTKydsdiNILRQEHALSTSKT 579
Cdd:PRK01156 191 KLKSSNLELENIKKQIADDEKSHSITLKEIERLSIEYNNAMDDYNNLKSALNELSSLEDMK-----NRYESEIKTAESDL 265
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 580 SVVIEELEQnIRQLKQQVQESELQRKQQVKDQEDKFHMEKNHLKYiYEEKVHELKSELDKeKEDAQRKIHKFEEALKEKE 659
Cdd:PRK01156 266 SMELEKNNY-YKELEERHMKIINDPVYKNRNYINDYFKYKNDIEN-KKQILSNIDAEINK-YHAIIKKLSVLQKDYNDYI 342
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 660 EQLGRVTEV--QRLQAQQADAALEEFKRQVEVTSEKVYSDMKEQmEKVEADLSRSKSLREKQSKEFLWQLEDAR---QRY 734
Cdd:PRK01156 343 KKKSRYDDLnnQILELEGYEMDYNSYLKSIESLKKKIEEYSKNI-ERMSAFISEILKIQEIDPDAIKKELNEINvklQDI 421
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 735 EQQIVELkleheqekthllqqhNAEKDSLvRDHEREVENLENQLRAANM----------EHENQIQESKKRDAQVIadmE 804
Cdd:PRK01156 422 SSKVSSL---------------NQRIRAL-RENLDELSRNMEMLNGQSVcpvcgttlgeEKSNHIINHYNEKKSRL---E 482
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 805 AQVHKLREELINVNSHRKQQLVELGLLREEEkqraARDHETAVKKLK-AESERVKMELKKTHAAETEMTLEKANSRLKQI 883
Cdd:PRK01156 483 EKIREIEIEVKDIDEKIVDLKKRKEYLESEE----INKSINEYNKIEsARADLEDIKIKINELKDKHDKYEEIKNRYKSL 558
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 884 -----EKEYTQKLAKSSQIIAELQTTISSLKEESSRQQLAAERRLQDVIQKFEDEKQQlirdNDQAIKALQDELETRSNQ 958
Cdd:PRK01156 559 kledlDSKRTSWLNALAVISLIDIETNRSRSNEIKKQLNDLESRLQEIEIGFPDDKSY----IDKSIREIENEANNLNNK 634
|
490
....*....|....*
gi 1958657572 959 VRSA-EKKLQHKELE 972
Cdd:PRK01156 635 YNEIqENKILIEKLR 649
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
583-1031 |
4.08e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.05 E-value: 4.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 583 IEELEQNIRQLKQQVQESElQRKQQVKDQEDKFHMEKNHLKYIYEEKVHELKSELDKEKEDAQRKIHKFEEALKEKEEQL 662
Cdd:COG4913 297 LEELRAELARLEAELERLE-ARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLEALLAALGLPL 375
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 663 GRVTEVQRLQAQQADAALEEFKRQVEVTSEKVY------SDMKEQMEKVEADLsrsKSLREKQS---KEflwqLEDARQR 733
Cdd:COG4913 376 PASAEEFAALRAEAAALLEALEEELEALEEALAeaeaalRDLRRELRELEAEI---ASLERRKSnipAR----LLALRDA 448
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 734 YEQQI-------------VELKLEHEQ-----EKthLLqqHNAEKDSLVRD-HEREV------ENLENQLRAANMEHENQ 788
Cdd:COG4913 449 LAEALgldeaelpfvgelIEVRPEEERwrgaiER--VL--GGFALTLLVPPeHYAAAlrwvnrLHLRGRLVYERVRTGLP 524
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 789 IQESKKRDAQVIAD-MEAQVHK----LREELINVNSHRK----QQLVEL-------GLLREEEKQRAARDH--------- 843
Cdd:COG4913 525 DPERPRLDPDSLAGkLDFKPHPfrawLEAELGRRFDYVCvdspEELRRHpraitraGQVKGNGTRHEKDDRrrirsryvl 604
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 844 -ETAVKKLKAESERVKmELKKTHAAetemtLEKANSRLKQIEKEYTQKLAKSSQI---------IAELQTTISSLKEEss 913
Cdd:COG4913 605 gFDNRAKLAALEAELA-ELEEELAE-----AEERLEALEAELDALQERREALQRLaeyswdeidVASAEREIAELEAE-- 676
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 914 RQQL--------AAERRLQDVIQKFEDEKQQLIRDNDQaIKALQDELETRSNQVRSAEKKLQHKELEAQEQMmyiRQEYE 985
Cdd:COG4913 677 LERLdassddlaALEEQLEELEAELEELEEELDELKGE-IGRLEKELEQAEEELDELQDRLEAAEDLARLEL---RALLE 752
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 1958657572 986 TKFKGLM----PASLRQELEDTISSLKSQVNFLQKRasiLQEELTTYQSR 1031
Cdd:COG4913 753 ERFAAALgdavERELRENLEERIDALRARLNRAEEE---LERAMRAFNRE 799
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
866-1032 |
4.42e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.52 E-value: 4.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 866 AAETEMTLEKANSRLKQIEKEytqkLAKSSQIIAELQTTISSLKEE--SSRQQLAAERRLQDVIQKFEDEKQQLIRDNDQ 943
Cdd:COG4942 15 AAAQADAAAEAEAELEQLQQE----IAELEKELAALKKEEKALLKQlaALERRIAALARRIRALEQELAALEAELAELEK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 944 AIKALQDELETR----SNQVRSAEKKLQHKELE---AQEQM--MYIRQEYetkFKGLMPASLRQ--ELEDTISSLKSQVN 1012
Cdd:COG4942 91 EIAELRAELEAQkeelAELLRALYRLGRQPPLAlllSPEDFldAVRRLQY---LKYLAPARREQaeELRADLAELAALRA 167
|
170 180
....*....|....*....|
gi 1958657572 1013 FLQKRASILQEELTTYQSRR 1032
Cdd:COG4942 168 ELEAERAELEALLAELEEER 187
|
|
| MukB |
COG3096 |
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell ... |
583-890 |
4.56e-03 |
|
Chromosome condensin MukBEF, ATPase and DNA-binding subunit MukB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 442330 [Multi-domain] Cd Length: 1470 Bit Score: 41.09 E-value: 4.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 583 IEELEQNIRQLKQQVQESELQRKQQVKDQEDKFHMEKNHLkyiyEEKVHELKSELDkEKEDAQRKIHKFEEALKEKEEQL 662
Cdd:COG3096 852 LAQHRAQEQQLRQQLDQLKEQLQLLNKLLPQANLLADETL----ADRLEELREELD-AAQEAQAFIQQHGKALAQLEPLV 926
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 663 GRV----TEVQRLQA--QQADAALEEFKRQVEVTSEKV-------YSDMKEQMEKvEADLSrsKSLREKqskefLWQLED 729
Cdd:COG3096 927 AVLqsdpEQFEQLQAdyLQAKEQQRRLKQQIFALSEVVqrrphfsYEDAVGLLGE-NSDLN--EKLRAR-----LEQAEE 998
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 730 ARQRYEQQivelkLEHEQEKthlLQQHNAEKDSLVRDHerevenlenqlRAANMEHENQIQESKKRDAQVIADMEAQVHK 809
Cdd:COG3096 999 ARREAREQ-----LRQAQAQ---YSQYNQVLASLKSSR-----------DAKQQTLQELEQELEELGVQADAEAEERARI 1059
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 810 LREELINVNSHRKQQLVELgllreeEKQRAARdhetavkklkaeservkmelkkthaaETEMtlEKANSRLKQIEKEYTQ 889
Cdd:COG3096 1060 RRDELHEELSQNRSRRSQL------EKQLTRC--------------------------EAEM--DSLQKRLRKAERDYKQ 1105
|
.
gi 1958657572 890 K 890
Cdd:COG3096 1106 E 1106
|
|
| PRK12704 |
PRK12704 |
phosphodiesterase; Provisional |
726-900 |
4.88e-03 |
|
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain] Cd Length: 520 Bit Score: 40.53 E-value: 4.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 726 QLEDARQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSLVRDHEREVENLENQLRaanmEHENQIQ---ESKKRDAQVIAD 802
Cdd:PRK12704 32 KIKEAEEEAKRILEEAKKEAEAIKKEALLEAKEEIHKLRNEFEKELRERRNELQ----KLEKRLLqkeENLDRKLELLEK 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 803 MEAQVHKLREELINVNSHRKQQLVELGLLREEEKQRAARdhetaVKKLKAEsERVKMELKKThaaETEMTLEKAnSRLKQ 882
Cdd:PRK12704 108 REEELEKKEKELEQKQQELEKKEEELEELIEEQLQELER-----ISGLTAE-EAKEILLEKV---EEEARHEAA-VLIKE 177
|
170 180
....*....|....*....|.
gi 1958657572 883 IEKEYTQ---KLAKssQIIAE 900
Cdd:PRK12704 178 IEEEAKEeadKKAK--EILAQ 196
|
|
| Myosin_tail_1 |
pfam01576 |
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and ... |
404-977 |
5.71e-03 |
|
Myosin tail; The myosin molecule is a multi-subunit complex made up of two heavy chains and four light chains it is a fundamental contractile protein found in all eukaryote cell types. This family consists of the coiled-coil myosin heavy chain tail region. The coiled-coil is composed of the tail from two molecules of myosin. These can then assemble into the macromolecular thick filament. The coiled-coil region provides the structural backbone the thick filament.
Pssm-ID: 460256 [Multi-domain] Cd Length: 1081 Bit Score: 40.93 E-value: 5.71e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 404 QVIRETKENQITELKKICEQST---ESLNNDWEKKLHSAVAEMEK--EKFELQKHHTETIQELLEDTNVRLSKMEGDYMV 478
Cdd:pfam01576 319 QELRSKREQEVTELKKALEEETrshEAQLQEMRQKHTQALEELTEqlEQAKRNKANLEKAKQALESENAELQAELRTLQQ 398
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 479 QTQSTNHMIKDLEGRVQQLMGEAENSNLQRQKLTQEKLELERCYQITCSELQELKTRQNLLHTEKEHLVNDYEQNVKLLK 558
Cdd:pfam01576 399 AKQDSEHKRKKLEGQLQELQARLSESERQRAELAEKLSKLQSELESVSSLLNEAEGKNIKLSKDVSSLESQLQDTQELLQ 478
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 559 TKYDSDINILRQEHALSTSKTSVV--IEELEQNIRQLKQQVQESELQRKQQVKDQED-------------KFHMEKNHLK 623
Cdd:pfam01576 479 EETRQKLNLSTRLRQLEDERNSLQeqLEEEEEAKRNVERQLSTLQAQLSDMKKKLEEdagtlealeegkkRLQRELEALT 558
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 624 YIYEEKVHEL------KSELDKEKEDA--------------QRKIHKFEEALKE-------------KEEQLGRVTEVQR 670
Cdd:pfam01576 559 QQLEEKAAAYdklektKNRLQQELDDLlvdldhqrqlvsnlEKKQKKFDQMLAEekaisaryaeerdRAEAEAREKETRA 638
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 671 LQAQQADAALEEFKRQVEVTSEKVYSDM------KEQMEKVEADLSRSKSLREKQSKEFLWQL----------EDARQRY 734
Cdd:pfam01576 639 LSLARALEEALEAKEELERTNKQLRAEMedlvssKDDVGKNVHELERSKRALEQQVEEMKTQLeeledelqatEDAKLRL 718
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 735 EQQIVELKLEHEQEKTHLLQQHNAEKDSL---VRDHEREVEN---------------------LENQLRAANMEHENQIQ 790
Cdd:pfam01576 719 EVNMQALKAQFERDLQARDEQGEEKRRQLvkqVRELEAELEDerkqraqavaakkkleldlkeLEAQIDAANKGREEAVK 798
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 791 ESKKRDAQV---IADMEaQVHKLREELINVN--SHRKQQLVELGLLREEEKQRAArdhETAVKKLKAESERVKMELKKTH 865
Cdd:pfam01576 799 QLKKLQAQMkdlQRELE-EARASRDEILAQSkeSEKKLKNLEAELLQLQEDLAAS---ERARRQAQQERDELADEIASGA 874
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 866 AAETEMTLEK--ANSRLKQIEKEyTQKLAKSSQIIAELQTTiSSLKEESSRQQLAAERRLQdviQKFEDEKQQLIRDNDQ 943
Cdd:pfam01576 875 SGKSALQDEKrrLEARIAQLEEE-LEEEQSNTELLNDRLRK-STLQVEQLTTELAAERSTS---QKSESARQQLERQNKE 949
|
650 660 670
....*....|....*....|....*....|....
gi 1958657572 944 AIKALQDELETRSNQVRSAEKKLQHKELEAQEQM 977
Cdd:pfam01576 950 LKAKLQEMEGTVKSKFKSSIAALEAKIAQLEEQL 983
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
726-940 |
6.56e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.67 E-value: 6.56e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 726 QLEDARQRYEQQIVELKLEHEQEKT------HLLQQHNAEKDslVRDHEREVENLENQLRAANmehenqiqeskkRDAQV 799
Cdd:COG4913 621 ELEEELAEAEERLEALEAELDALQErrealqRLAEYSWDEID--VASAEREIAELEAELERLD------------ASSDD 686
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 800 IADMEAQVHKLREELinvnshrkQQLVElgllREEEKQRAARDHETAVKKLKAESERVKMELKKTHAAETEMTLEKANSR 879
Cdd:COG4913 687 LAALEEQLEELEAEL--------EELEE----ELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLARLELRALLEER 754
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1958657572 880 LKQIEKEytqklAKSSQIIAELQTTISSLKEESSRQQLAAERRLQDVIQKFEDEKQQLIRD 940
Cdd:COG4913 755 FAAALGD-----AVERELRENLEERIDALRARLNRAEEELERAMRAFNREWPAETADLDAD 810
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
802-1032 |
7.64e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 40.28 E-value: 7.64e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 802 DMEAQVHKLREELINVNSHRKQqlvelglLREEEKQRAA----RDHETAVKKLKAESERVKMELKKTHAAETEMTLEKAN 877
Cdd:COG4913 222 DTFEAADALVEHFDDLERAHEA-------LEDAREQIELlepiRELAERYAAARERLAELEYLRAALRLWFAQRRLELLE 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 878 SRLKQIEKEYTQKLAKssqiIAELQTTISSLKEEssRQQLAAERRLQDViqkfeDEKQQLIRDndqaIKALQDELETRSN 957
Cdd:COG4913 295 AELEELRAELARLEAE----LERLEARLDALREE--LDELEAQIRGNGG-----DRLEQLERE----IERLERELEERER 359
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 958 QVRSAEKKLQHKEL----------EAQEQMMYIRQEYEtkfkglmpaSLRQELEDTISSLKSQVNFLQKRASILQEELTT 1027
Cdd:COG4913 360 RRARLEALLAALGLplpasaeefaALRAEAAALLEALE---------EELEALEEALAEAEAALRDLRRELRELEAEIAS 430
|
....*
gi 1958657572 1028 YQSRR 1032
Cdd:COG4913 431 LERRK 435
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
487-832 |
8.08e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 40.33 E-value: 8.08e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 487 IKDLEGRVQQlmgeaensnlQRQKLTQEKLElercyqitCSELQELKTRQNLLhtEKEHLVNDYEQNVKLLKTKYDSDIN 566
Cdd:PRK04863 853 LADHESQEQQ----------QRSQLEQAKEG--------LSALNRLLPRLNLL--ADETLADRVEEIREQLDEAEEAKRF 912
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 567 ILRQEHALSTSKTSV-VIEELEQNIRQLKQQVQESE--LQRKQQVKDQEDKFHMEKNHLKYIYEEKVHELKSELDkeked 643
Cdd:PRK04863 913 VQQHGNALAQLEPIVsVLQSDPEQFEQLKQDYQQAQqtQRDAKQQAFALTEVVQRRAHFSYEDAAEMLAKNSDLN----- 987
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 644 aqrkihkfeEALKEKEEQLGRVTEVQRLQAQQADAALEEFKrqvevtsekvysdmkeqmeKVEADLSRSKSLREKQSKEF 723
Cdd:PRK04863 988 ---------EKLRQRLEQAEQERTRAREQLRQAQAQLAQYN-------------------QVLASLKSSYDAKRQMLQEL 1039
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 724 LWQLEDARQRYEQQIVELKLEHEQEKTHLLQQHNAEKDSLVRDH---EREVENLENQLRAANMEH---ENQIQESKKRDA 797
Cdd:PRK04863 1040 KQELQDLGVPADSGAEERARARRDELHARLSANRSRRNQLEKQLtfcEAEMDNLTKKLRKLERDYhemREQVVNAKAGWC 1119
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1958657572 798 QVI-----ADMEAQVHklREELINVNSH--RKQQLVELGLLR 832
Cdd:PRK04863 1120 AVLrlvkdNGVERRLH--RRELAYLSADelRSMSDKALGALR 1159
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
322-723 |
8.75e-03 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 40.34 E-value: 8.75e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 322 DDHFLSRMHEKELDMKTKMMEAKFSEEKLkLQKKHDAEVQKILERKNNELEELKILYKKKQTETEETVRKLEKKVQILIR 401
Cdd:pfam02463 630 KDTELTKLKESAKAKESGLRKGVSLEEGL-AEKSEVKASLSELTKELLEIQELQEKAESELAKEEILRRQLEIKKKEQRE 708
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 402 DCQVIRETKENQITELKKICEQSTESLNNDWEKKLHSAVAEMEKEKFELQKhhtETIQELLEDTNVRLSKMEgdymvqtq 481
Cdd:pfam02463 709 KEELKKLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKK---EEKEEEKSELSLKEKELA-------- 777
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 482 stnhmikdlegrvqqLMGEAENSNLQRQKLTQEKLELERCYQITCSELQELKTRQNLLHTEKEHLVNDYEQnvKLLKTKY 561
Cdd:pfam02463 778 ---------------EEREKTEKLKVEEEKEEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEE--ELEELAL 840
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 562 DSDINILRQEHALSTSKTSVVIEELEQNIRQLKQQVQESELQRKQQVKDQEDKFHMEKNHLKYIYEEKVHELKSELDKEK 641
Cdd:pfam02463 841 ELKEEQKLEKLAEEELERLEEEITKEELLQELLLKEEELEEQKLKDELESKEEKEKEEKKELEEESQKLNLLEEKENEIE 920
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 642 EDAQRKIHKFEEALKEKEEQLGRVTEVQRLQAQQADAALEEFKRQVEVTSEKVYSDMKEQMEKVEADLSRSKSLREKQSK 721
Cdd:pfam02463 921 ERIKEEAEILLKYEEEPEELLLEEADEKEKEENNKEEEEERNKRLLLAKEELGKVNLMAIEEFEEKEERYNKDELEKERL 1000
|
..
gi 1958657572 722 EF 723
Cdd:pfam02463 1001 EE 1002
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
336-911 |
8.86e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 40.00 E-value: 8.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 336 MKTKMMEAKFSEEKLKLQKKHDAEVQKILERKNNELEELKILYKKKQTETEEtvrkLEKKVQILIRDCQVIRETKEN-QI 414
Cdd:TIGR04523 119 KNKLEVELNKLEKQKKENKKNIDKFLTEIKKKEKELEKLNNKYNDLKKQKEE----LENELNLLEKEKLNIQKNIDKiKN 194
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 415 TELKKICEQSTESLNNDWEKKLHSAVAEMEKEKFELQKHHTETIQELLEDTNVrLSKMEGDYMVQTQSTNHMIKDLEGRV 494
Cdd:TIGR04523 195 KLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTE-ISNTQTQLNQLKDEQNKIKKQLSEKQ 273
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 495 QQLmgeaENSNLQRQKLTQeklelercyqitcsELQELKTRQNLLHTEKEhlvNDYEQNVKLLKTKYDSDINILRQEhal 574
Cdd:TIGR04523 274 KEL----EQNNKKIKELEK--------------QLNQLKSEISDLNNQKE---QDWNKELKSELKNQEKKLEEIQNQ--- 329
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 575 sTSKTSVVIEELEQNIRQLKQQVQESELQRKQQVKDQEDKfhmeKNHLKYIYEEKVHELKS--ELDKEKEDAQRKIHKFE 652
Cdd:TIGR04523 330 -ISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEK----QNEIEKLKKENQSYKQEikNLESQINDLESKIQNQE 404
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 653 EALKEKEEQLgrvtEVQRLQAQQADAALEEFKRQVEVTSEKVySDMKEQ---MEKVEADLSRSKSLREKQSKEFLWQLED 729
Cdd:TIGR04523 405 KLNQQKDEQI----KKLQQEKELLEKEIERLKETIIKNNSEI-KDLTNQdsvKELIIKNLDNTRESLETQLKVLSRSINK 479
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 730 ARQRYEQQIVELKLEHEQEKThlLQQHNAEKDSLVRDHEREVENLENQLRAANMEHENQIQESKKRDAQVIADMEaqvHK 809
Cdd:TIGR04523 480 IKQNLEQKQKELKSKEKELKK--LNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDF---EL 554
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 810 LREELINVNSHRKQQLVELgllreEEKQRAARDHETAVKKLKAESERVKMELKKtHAAETEMTLEKANSRLKQIEKEYTq 889
Cdd:TIGR04523 555 KKENLEKEIDEKNKEIEEL-----KQTQKSLKKKQEEKQELIDQKEKEKKDLIK-EIEEKEKKISSLEKELEKAKKENE- 627
|
570 580
....*....|....*....|..
gi 1958657572 890 klaKSSQIIAELQTTISSLKEE 911
Cdd:TIGR04523 628 ---KLSSIIKNIKSKKNKLKQE 646
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
628-851 |
9.38e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 39.75 E-value: 9.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 628 EKVHELKSELDKEKEDAQRKIHKFEEALKEKEEQLGRVT-EVQRLQAQQadAALEEFKRQVEVTSEKVYSDMKEQMEKVE 706
Cdd:COG4942 30 EQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALArRIRALEQEL--AALEAELAELEKEIAELRAELEAQKEELA 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 707 ADLSRSKSLREKQSKEFLWQLEDA-----RQRYEQQIVelklEHEQEKTHLLQQHNAEKDSLVRDHEREVENLEnQLRAA 781
Cdd:COG4942 108 ELLRALYRLGRQPPLALLLSPEDFldavrRLQYLKYLA----PARREQAEELRADLAELAALRAELEAERAELE-ALLAE 182
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958657572 782 NMEHENQIQESKKRDAQVIADMEAQVHKLREELINVNSHRKQQLVELGLLREEEKQRAARDHETAVKKLK 851
Cdd:COG4942 183 LEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGFAALK 252
|
|
| |
