ORM1-like protein 1 isoform X1 [Rattus norvegicus]
Protein Classification
List of domain hits
| Name | Accession | Description | Interval | E-value | ||
| ORMDL super family | cl02117 | ORMDL family; Evidence form suggests that ORMDLs are involved in protein folding in the ER. ... |
11-60 | 6.73e-21 | ||
ORMDL family; Evidence form suggests that ORMDLs are involved in protein folding in the ER. Orm proteins have been identified as negative regulators of sphingolipid synthesis that form a conserved complex with serine palmitoyltransferase, the first and rate-limiting enzyme in sphingolipid production. This novel and conserved protein complex, has been termed the SPOTS complex (serine palmitoyltransferase, Orm1/2, Tsc3, and Sac1). The actual alignment was detected with superfamily member pfam04061: Pssm-ID: 470473 Cd Length: 135 Bit Score: 88.00 E-value: 6.73e-21
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| Gag_p24 | pfam00607 | gag protein p24 N-terminal domain; p24 forms inner protein layer of the nucleocapsid. ELISA ... |
332-408 | 1.08e-16 | ||
gag protein p24 N-terminal domain; p24 forms inner protein layer of the nucleocapsid. ELISA tests for p24 is the most commonly used method to demonstrate virus replication both in vivo and in vitro. : Pssm-ID: 459864 Cd Length: 128 Bit Score: 75.78 E-value: 1.08e-16
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| Name | Accession | Description | Interval | E-value | ||
| ORMDL | pfam04061 | ORMDL family; Evidence form suggests that ORMDLs are involved in protein folding in the ER. ... |
11-60 | 6.73e-21 | ||
ORMDL family; Evidence form suggests that ORMDLs are involved in protein folding in the ER. Orm proteins have been identified as negative regulators of sphingolipid synthesis that form a conserved complex with serine palmitoyltransferase, the first and rate-limiting enzyme in sphingolipid production. This novel and conserved protein complex, has been termed the SPOTS complex (serine palmitoyltransferase, Orm1/2, Tsc3, and Sac1). Pssm-ID: 461151 Cd Length: 135 Bit Score: 88.00 E-value: 6.73e-21
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| Gag_p24 | pfam00607 | gag protein p24 N-terminal domain; p24 forms inner protein layer of the nucleocapsid. ELISA ... |
332-408 | 1.08e-16 | ||
gag protein p24 N-terminal domain; p24 forms inner protein layer of the nucleocapsid. ELISA tests for p24 is the most commonly used method to demonstrate virus replication both in vivo and in vitro. Pssm-ID: 459864 Cd Length: 128 Bit Score: 75.78 E-value: 1.08e-16
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| Name | Accession | Description | Interval | E-value | ||
| ORMDL | pfam04061 | ORMDL family; Evidence form suggests that ORMDLs are involved in protein folding in the ER. ... |
11-60 | 6.73e-21 | ||
ORMDL family; Evidence form suggests that ORMDLs are involved in protein folding in the ER. Orm proteins have been identified as negative regulators of sphingolipid synthesis that form a conserved complex with serine palmitoyltransferase, the first and rate-limiting enzyme in sphingolipid production. This novel and conserved protein complex, has been termed the SPOTS complex (serine palmitoyltransferase, Orm1/2, Tsc3, and Sac1). Pssm-ID: 461151 Cd Length: 135 Bit Score: 88.00 E-value: 6.73e-21
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| Gag_p24 | pfam00607 | gag protein p24 N-terminal domain; p24 forms inner protein layer of the nucleocapsid. ELISA ... |
332-408 | 1.08e-16 | ||
gag protein p24 N-terminal domain; p24 forms inner protein layer of the nucleocapsid. ELISA tests for p24 is the most commonly used method to demonstrate virus replication both in vivo and in vitro. Pssm-ID: 459864 Cd Length: 128 Bit Score: 75.78 E-value: 1.08e-16
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| Blast search parameters | ||||
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