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Conserved domains on  [gi|1958646393|ref|XP_038935259|]
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serine/threonine-protein phosphatase 6 regulatory subunit 3 isoform X6 [Rattus norvegicus]

Protein Classification

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
SAPS pfam04499
SIT4 phosphatase-associated protein; This family includes a conserved region from a group of ...
128-513 2.35e-152

SIT4 phosphatase-associated protein; This family includes a conserved region from a group of yeast proteins that associate with the SIT4 phosphatase. This association is required for SIT4's role in G1 cyclin transcription and for bud formation. This family also includes homologous regions from other eukaryotes.


:

Pssm-ID: 398279  Cd Length: 383  Bit Score: 452.08  E-value: 2.35e-152
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958646393 128 LSILISRKPEQIVDFLKKKRDFVDLIIKHIGTSAIMDLLLRLLTCIEPpQPRQDVLNWLNEERIIQRLVEIVHPSQEEDR 207
Cdd:pfam04499   1 NENLLDRKTDQMIEFIRKQENFVDKFLKHIDTPAIMDLLLKLISTDKP-ELPTGVIEWLNEQNLIPKLLDLLSPSYDEDI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958646393 208 HSNASQSLCEIVRLSRDQMLQVQNSTEPDPLLATLEKQEIIEQLLSNIFhKEKNESAIVSAIQILLTLLETRRPTFEGH- 286
Cdd:pfam04499  80 QSNASDFLKAIITISRNAPLQLQSSIGPNELTRELVSEESVEKLLDNML-KGKSGSALVNGVGIIIELIRKNNSDYDPVq 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958646393 287 -----IEICPPGMSHSaCSVNkSVLEAIRGRLGSFHELLLEPPKKSVMKTTWGILDPPVGNTRLNVIRLISSLLQTNTSS 361
Cdd:pfam04499 159 llyttLEEHPPSDRDP-IYLG-HLLRAFSPHLPDFHQLLLDPPKDSPLQTTLGVLIEPLGFERFKIVELIAELLHCSNMS 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958646393 362 INGD---------LMELNSIGVILDMFFKYTWNNFLHTQVEICIALILASPFENAENgtitdqdsagdNLLLKHLFQKCQ 432
Cdd:pfam04499 237 LLNEkkgeklkikLVDLGIIPTILDLFFKYPWNNFLHNVVEDIIQQILNGPMDFSYN-----------SFLVVDLFTDCN 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958646393 433 LIERILDAWDTNEKKQAEGGRRHGYMGHLTRIANCIVHSTDKGPNSALVQQLIKGLpdgVRERWEAFCTDSLGEANKRNT 512
Cdd:pfam04499 306 LTQRILEGQKESDRFQAEKGPRLGYMGHLTLIAEEVVKFSEKYPPELISPDILEIL---ENEEWEEYVEETLEETRERYN 382

                  .
gi 1958646393 513 A 513
Cdd:pfam04499 383 V 383
LGT super family cl00478
Prolipoprotein diacylglyceryl transferase;
717-849 5.79e-04

Prolipoprotein diacylglyceryl transferase;


The actual alignment was detected with superfamily member PRK13108:

Pssm-ID: 469786 [Multi-domain]  Cd Length: 460  Bit Score: 43.43  E-value: 5.79e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958646393 717 ESLRSNSPVEMEtstepvgPLTPGAAALASQPEApgSVAMEASSDGEEDAESTDKVTETVMNggMKETLSLTVDAKTETA 796
Cdd:PRK13108  283 GALRGSEYVVDE-------ALEREPAELAAAAVA--SAASAVGPVGPGEPNQPDDVAEAVKA--EVAEVTDEVAAESVVQ 351
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1958646393 797 VFKSEEEKLSTSQDAACKDTEEtPESAEAKCTAPRTPNSSPEQRTDQPSMPGD 849
Cdd:PRK13108  352 VADRDGESTPAVEETSEADIER-EQPGDLAGQAPAAHQVDAEAASAAPEEPAA 403
 
Name Accession Description Interval E-value
SAPS pfam04499
SIT4 phosphatase-associated protein; This family includes a conserved region from a group of ...
128-513 2.35e-152

SIT4 phosphatase-associated protein; This family includes a conserved region from a group of yeast proteins that associate with the SIT4 phosphatase. This association is required for SIT4's role in G1 cyclin transcription and for bud formation. This family also includes homologous regions from other eukaryotes.


Pssm-ID: 398279  Cd Length: 383  Bit Score: 452.08  E-value: 2.35e-152
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958646393 128 LSILISRKPEQIVDFLKKKRDFVDLIIKHIGTSAIMDLLLRLLTCIEPpQPRQDVLNWLNEERIIQRLVEIVHPSQEEDR 207
Cdd:pfam04499   1 NENLLDRKTDQMIEFIRKQENFVDKFLKHIDTPAIMDLLLKLISTDKP-ELPTGVIEWLNEQNLIPKLLDLLSPSYDEDI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958646393 208 HSNASQSLCEIVRLSRDQMLQVQNSTEPDPLLATLEKQEIIEQLLSNIFhKEKNESAIVSAIQILLTLLETRRPTFEGH- 286
Cdd:pfam04499  80 QSNASDFLKAIITISRNAPLQLQSSIGPNELTRELVSEESVEKLLDNML-KGKSGSALVNGVGIIIELIRKNNSDYDPVq 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958646393 287 -----IEICPPGMSHSaCSVNkSVLEAIRGRLGSFHELLLEPPKKSVMKTTWGILDPPVGNTRLNVIRLISSLLQTNTSS 361
Cdd:pfam04499 159 llyttLEEHPPSDRDP-IYLG-HLLRAFSPHLPDFHQLLLDPPKDSPLQTTLGVLIEPLGFERFKIVELIAELLHCSNMS 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958646393 362 INGD---------LMELNSIGVILDMFFKYTWNNFLHTQVEICIALILASPFENAENgtitdqdsagdNLLLKHLFQKCQ 432
Cdd:pfam04499 237 LLNEkkgeklkikLVDLGIIPTILDLFFKYPWNNFLHNVVEDIIQQILNGPMDFSYN-----------SFLVVDLFTDCN 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958646393 433 LIERILDAWDTNEKKQAEGGRRHGYMGHLTRIANCIVHSTDKGPNSALVQQLIKGLpdgVRERWEAFCTDSLGEANKRNT 512
Cdd:pfam04499 306 LTQRILEGQKESDRFQAEKGPRLGYMGHLTLIAEEVVKFSEKYPPELISPDILEIL---ENEEWEEYVEETLEETRERYN 382

                  .
gi 1958646393 513 A 513
Cdd:pfam04499 383 V 383
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
717-849 5.79e-04

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 43.43  E-value: 5.79e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958646393 717 ESLRSNSPVEMEtstepvgPLTPGAAALASQPEApgSVAMEASSDGEEDAESTDKVTETVMNggMKETLSLTVDAKTETA 796
Cdd:PRK13108  283 GALRGSEYVVDE-------ALEREPAELAAAAVA--SAASAVGPVGPGEPNQPDDVAEAVKA--EVAEVTDEVAAESVVQ 351
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1958646393 797 VFKSEEEKLSTSQDAACKDTEEtPESAEAKCTAPRTPNSSPEQRTDQPSMPGD 849
Cdd:PRK13108  352 VADRDGESTPAVEETSEADIER-EQPGDLAGQAPAAHQVDAEAASAAPEEPAA 403
 
Name Accession Description Interval E-value
SAPS pfam04499
SIT4 phosphatase-associated protein; This family includes a conserved region from a group of ...
128-513 2.35e-152

SIT4 phosphatase-associated protein; This family includes a conserved region from a group of yeast proteins that associate with the SIT4 phosphatase. This association is required for SIT4's role in G1 cyclin transcription and for bud formation. This family also includes homologous regions from other eukaryotes.


Pssm-ID: 398279  Cd Length: 383  Bit Score: 452.08  E-value: 2.35e-152
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958646393 128 LSILISRKPEQIVDFLKKKRDFVDLIIKHIGTSAIMDLLLRLLTCIEPpQPRQDVLNWLNEERIIQRLVEIVHPSQEEDR 207
Cdd:pfam04499   1 NENLLDRKTDQMIEFIRKQENFVDKFLKHIDTPAIMDLLLKLISTDKP-ELPTGVIEWLNEQNLIPKLLDLLSPSYDEDI 79
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958646393 208 HSNASQSLCEIVRLSRDQMLQVQNSTEPDPLLATLEKQEIIEQLLSNIFhKEKNESAIVSAIQILLTLLETRRPTFEGH- 286
Cdd:pfam04499  80 QSNASDFLKAIITISRNAPLQLQSSIGPNELTRELVSEESVEKLLDNML-KGKSGSALVNGVGIIIELIRKNNSDYDPVq 158
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958646393 287 -----IEICPPGMSHSaCSVNkSVLEAIRGRLGSFHELLLEPPKKSVMKTTWGILDPPVGNTRLNVIRLISSLLQTNTSS 361
Cdd:pfam04499 159 llyttLEEHPPSDRDP-IYLG-HLLRAFSPHLPDFHQLLLDPPKDSPLQTTLGVLIEPLGFERFKIVELIAELLHCSNMS 236
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958646393 362 INGD---------LMELNSIGVILDMFFKYTWNNFLHTQVEICIALILASPFENAENgtitdqdsagdNLLLKHLFQKCQ 432
Cdd:pfam04499 237 LLNEkkgeklkikLVDLGIIPTILDLFFKYPWNNFLHNVVEDIIQQILNGPMDFSYN-----------SFLVVDLFTDCN 305
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958646393 433 LIERILDAWDTNEKKQAEGGRRHGYMGHLTRIANCIVHSTDKGPNSALVQQLIKGLpdgVRERWEAFCTDSLGEANKRNT 512
Cdd:pfam04499 306 LTQRILEGQKESDRFQAEKGPRLGYMGHLTLIAEEVVKFSEKYPPELISPDILEIL---ENEEWEEYVEETLEETRERYN 382

                  .
gi 1958646393 513 A 513
Cdd:pfam04499 383 V 383
PRK13108 PRK13108
prolipoprotein diacylglyceryl transferase; Reviewed
717-849 5.79e-04

prolipoprotein diacylglyceryl transferase; Reviewed


Pssm-ID: 237284 [Multi-domain]  Cd Length: 460  Bit Score: 43.43  E-value: 5.79e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958646393 717 ESLRSNSPVEMEtstepvgPLTPGAAALASQPEApgSVAMEASSDGEEDAESTDKVTETVMNggMKETLSLTVDAKTETA 796
Cdd:PRK13108  283 GALRGSEYVVDE-------ALEREPAELAAAAVA--SAASAVGPVGPGEPNQPDDVAEAVKA--EVAEVTDEVAAESVVQ 351
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|...
gi 1958646393 797 VFKSEEEKLSTSQDAACKDTEEtPESAEAKCTAPRTPNSSPEQRTDQPSMPGD 849
Cdd:PRK13108  352 VADRDGESTPAVEETSEADIER-EQPGDLAGQAPAAHQVDAEAASAAPEEPAA 403
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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