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Conserved domains on  [gi|1958788792|ref|XP_038934797|]
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serine/threonine-protein phosphatase 6 regulatory subunit 2 isoform X6 [Rattus norvegicus]

Protein Classification

SAPS family protein( domain architecture ID 10517350)

SAPS (SIT4-associating proteins) family protein

Gene Ontology:  GO:0019888|GO:0043666
PubMed:  8649382

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
SAPS pfam04499
SIT4 phosphatase-associated protein; This family includes a conserved region from a group of ...
2-394 6.31e-155

SIT4 phosphatase-associated protein; This family includes a conserved region from a group of yeast proteins that associate with the SIT4 phosphatase. This association is required for SIT4's role in G1 cyclin transcription and for bud formation. This family also includes homologous regions from other eukaryotes.


:

Pssm-ID: 398279  Cd Length: 383  Bit Score: 457.09  E-value: 6.31e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792   2 FLKKKDKFISLILKHIGTSALMDLLLRLVSCVEPVvLRQEVLHWLNEEKVIQRLVELIHPHQDEDRQSNASQALCDIIRL 81
Cdd:pfam04499  15 FIRKQENFVDKFLKHIDTPAIMDLLLKLISTDKPE-LPTGVIEWLNEQNLIPKLLDLLSPSYDEDIQSNASDFLKAIITI 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792  82 GRDQGSQLQETVEPDPLLTALESQDCVEQLLKNMFDGdRTESCLVSGMQVLLALLEPRRVGTEGLVDSFSQGLERSYSVS 161
Cdd:pfam04499  94 SRNAPLQLQSSIGPNELTRELVSEESVEKLLDNMLKG-KSGSALVNGVGIIIELIRKNNSDYDPVQLLYTTLEEHPPSDR 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792 162 SSI-----LHGIEPWLKNFHQLLLNPPKKKAILTTIGVLEEPLGNARLHGARLMAALLHTNTPSINQE---------LCR 227
Cdd:pfam04499 173 DPIylghlLRAFSPHLPDFHQLLLDPPKDSPLQTTLGVLIEPLGFERFKIVELIAELLHCSNMSLLNEkkgeklkikLVD 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792 228 LNTMDLLLDLFFKYTWNNFLHLQVELCIAAILShagreeqaeagrsdgkvepvqgsgdggGKPETtpsitsPPENTMVTH 307
Cdd:pfam04499 253 LGIIPTILDLFFKYPWNNFLHNVVEDIIQQILN---------------------------GPMDF------SYNSFLVVD 299
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792 308 LFQKCCLVQRILEAWEANDNTQAAGGMRRGNMGHLTRIANAVVQNLEQGPVQTHISEVIRGLpaeCRGRWESFVEETLME 387
Cdd:pfam04499 300 LFTDCNLTQRILEGQKESDRFQAEKGPRLGYMGHLTLIAEEVVKFSEKYPPELISPDILEIL---ENEEWEEYVEETLEE 376

                  ....*..
gi 1958788792 388 TNRRNTV 394
Cdd:pfam04499 377 TRERYNV 383
PHA03247 super family cl33720
large tegument protein UL36; Provisional
511-784 3.83e-05

large tegument protein UL36; Provisional


The actual alignment was detected with superfamily member PHA03247:

Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 47.63  E-value: 3.83e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792  511 VMARA-RFGAPHTSeNYSKKAVGHGGQGRKTGSPTArnvPGLATPSSPTQKEGPRSESDSAGTTWTAVFDEPVNPLSAAS 589
Cdd:PHA03247  2582 VTSRArRPDAPPQS-ARPRAPVDDRGDPRGPAPPSP---LPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPA 2657
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792  590 GA----ARDVGSSAWAAGPSvAEEKGW---------AKFTDFQ----PFCCSETGPRCSSPVDMDHSNAEGGQSPGPEKA 652
Cdd:PHA03247  2658 PGrvsrPRRARRLGRAAQAS-SPPQRPrrraarptvGSLTSLAdpppPPPTPEPAPHALVSATPLPPGPAAARQASPALP 2736
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792  653 FGPTSPCAWNVCVTRKAPlvasDSSSSGGSDSEDDEKAAGAVEAlcaghtgkASPPPRTAEAAAGRAECPDSTVLAPACP 732
Cdd:PHA03247  2737 AAPAPPAVPAGPATPGGP----ARPARPPTTAGPPAPAPPAAPA--------AGPPRRLTRPAVASLSESRESLPSPWDP 2804
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1958788792  733 APSEVTISPAVATIAPSKA-GSPTATIVVSSSVATAVPPGPIMAVTTTAPAIV 784
Cdd:PHA03247  2805 ADPPAAVLAPAAALPPAASpAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVA 2857
 
Name Accession Description Interval E-value
SAPS pfam04499
SIT4 phosphatase-associated protein; This family includes a conserved region from a group of ...
2-394 6.31e-155

SIT4 phosphatase-associated protein; This family includes a conserved region from a group of yeast proteins that associate with the SIT4 phosphatase. This association is required for SIT4's role in G1 cyclin transcription and for bud formation. This family also includes homologous regions from other eukaryotes.


Pssm-ID: 398279  Cd Length: 383  Bit Score: 457.09  E-value: 6.31e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792   2 FLKKKDKFISLILKHIGTSALMDLLLRLVSCVEPVvLRQEVLHWLNEEKVIQRLVELIHPHQDEDRQSNASQALCDIIRL 81
Cdd:pfam04499  15 FIRKQENFVDKFLKHIDTPAIMDLLLKLISTDKPE-LPTGVIEWLNEQNLIPKLLDLLSPSYDEDIQSNASDFLKAIITI 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792  82 GRDQGSQLQETVEPDPLLTALESQDCVEQLLKNMFDGdRTESCLVSGMQVLLALLEPRRVGTEGLVDSFSQGLERSYSVS 161
Cdd:pfam04499  94 SRNAPLQLQSSIGPNELTRELVSEESVEKLLDNMLKG-KSGSALVNGVGIIIELIRKNNSDYDPVQLLYTTLEEHPPSDR 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792 162 SSI-----LHGIEPWLKNFHQLLLNPPKKKAILTTIGVLEEPLGNARLHGARLMAALLHTNTPSINQE---------LCR 227
Cdd:pfam04499 173 DPIylghlLRAFSPHLPDFHQLLLDPPKDSPLQTTLGVLIEPLGFERFKIVELIAELLHCSNMSLLNEkkgeklkikLVD 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792 228 LNTMDLLLDLFFKYTWNNFLHLQVELCIAAILShagreeqaeagrsdgkvepvqgsgdggGKPETtpsitsPPENTMVTH 307
Cdd:pfam04499 253 LGIIPTILDLFFKYPWNNFLHNVVEDIIQQILN---------------------------GPMDF------SYNSFLVVD 299
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792 308 LFQKCCLVQRILEAWEANDNTQAAGGMRRGNMGHLTRIANAVVQNLEQGPVQTHISEVIRGLpaeCRGRWESFVEETLME 387
Cdd:pfam04499 300 LFTDCNLTQRILEGQKESDRFQAEKGPRLGYMGHLTLIAEEVVKFSEKYPPELISPDILEIL---ENEEWEEYVEETLEE 376

                  ....*..
gi 1958788792 388 TNRRNTV 394
Cdd:pfam04499 377 TRERYNV 383
PHA03247 PHA03247
large tegument protein UL36; Provisional
511-784 3.83e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 47.63  E-value: 3.83e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792  511 VMARA-RFGAPHTSeNYSKKAVGHGGQGRKTGSPTArnvPGLATPSSPTQKEGPRSESDSAGTTWTAVFDEPVNPLSAAS 589
Cdd:PHA03247  2582 VTSRArRPDAPPQS-ARPRAPVDDRGDPRGPAPPSP---LPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPA 2657
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792  590 GA----ARDVGSSAWAAGPSvAEEKGW---------AKFTDFQ----PFCCSETGPRCSSPVDMDHSNAEGGQSPGPEKA 652
Cdd:PHA03247  2658 PGrvsrPRRARRLGRAAQAS-SPPQRPrrraarptvGSLTSLAdpppPPPTPEPAPHALVSATPLPPGPAAARQASPALP 2736
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792  653 FGPTSPCAWNVCVTRKAPlvasDSSSSGGSDSEDDEKAAGAVEAlcaghtgkASPPPRTAEAAAGRAECPDSTVLAPACP 732
Cdd:PHA03247  2737 AAPAPPAVPAGPATPGGP----ARPARPPTTAGPPAPAPPAAPA--------AGPPRRLTRPAVASLSESRESLPSPWDP 2804
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1958788792  733 APSEVTISPAVATIAPSKA-GSPTATIVVSSSVATAVPPGPIMAVTTTAPAIV 784
Cdd:PHA03247  2805 ADPPAAVLAPAAALPPAASpAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVA 2857
DUF5585 pfam17823
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
505-800 6.18e-05

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 46.49  E-value: 6.18e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792 505 TRCTARVMARArfgaPHTSENYSKKAVGHGGQGRKTGSPTArNVPGLATPSSPTQKEGPRSESDSAGTTwtavfDEPVNP 584
Cdd:pfam17823  84 TEVTAEHTPHG----TDLSEPATREGAADGAASRALAAAAS-SSPSSAAQSLPAAIAALPSEAFSAPRA-----AACRAN 153
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792 585 LSAASGAARDVGSSAWAAGP------SVAEEKGWAKFTDFQPFCCSETGPRCSSPVdmdhsnaeggqSPGPEKAFGPTSP 658
Cdd:pfam17823 154 ASAAPRAAIAAASAPHAASPaprtaaSSTTAASSTTAASSAPTTAASSAPATLTPA-----------RGISTAATATGHP 222
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792 659 CAWNVcvTRKAPLVASDSSSSGGSDSEDDEKAAGAVealcAGHTGKAsppprTAEAAAGRAECPDSTVLAPACPAPSEVT 738
Cdd:pfam17823 223 AAGTA--LAAVGNSSPAAGTVTAAVGTVTPAALATL----AAAAGTV-----ASAAGTINMGDPHARRLSPAKHMPSDTM 291
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958788792 739 ISPAVATIAPSKAGSPTATIVVSSSVATAVPPGPIMAVTTTAP-----------AIVATLGTMTKDRKTDALP 800
Cdd:pfam17823 292 ARNPAAPMGAQAQGPIIQVSTDQPVHNTAGEPTPSPSNTTLEPntpksvastnlAVVTTTKAQAKEPSASPVP 364
 
Name Accession Description Interval E-value
SAPS pfam04499
SIT4 phosphatase-associated protein; This family includes a conserved region from a group of ...
2-394 6.31e-155

SIT4 phosphatase-associated protein; This family includes a conserved region from a group of yeast proteins that associate with the SIT4 phosphatase. This association is required for SIT4's role in G1 cyclin transcription and for bud formation. This family also includes homologous regions from other eukaryotes.


Pssm-ID: 398279  Cd Length: 383  Bit Score: 457.09  E-value: 6.31e-155
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792   2 FLKKKDKFISLILKHIGTSALMDLLLRLVSCVEPVvLRQEVLHWLNEEKVIQRLVELIHPHQDEDRQSNASQALCDIIRL 81
Cdd:pfam04499  15 FIRKQENFVDKFLKHIDTPAIMDLLLKLISTDKPE-LPTGVIEWLNEQNLIPKLLDLLSPSYDEDIQSNASDFLKAIITI 93
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792  82 GRDQGSQLQETVEPDPLLTALESQDCVEQLLKNMFDGdRTESCLVSGMQVLLALLEPRRVGTEGLVDSFSQGLERSYSVS 161
Cdd:pfam04499  94 SRNAPLQLQSSIGPNELTRELVSEESVEKLLDNMLKG-KSGSALVNGVGIIIELIRKNNSDYDPVQLLYTTLEEHPPSDR 172
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792 162 SSI-----LHGIEPWLKNFHQLLLNPPKKKAILTTIGVLEEPLGNARLHGARLMAALLHTNTPSINQE---------LCR 227
Cdd:pfam04499 173 DPIylghlLRAFSPHLPDFHQLLLDPPKDSPLQTTLGVLIEPLGFERFKIVELIAELLHCSNMSLLNEkkgeklkikLVD 252
                         250       260       270       280       290       300       310       320
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792 228 LNTMDLLLDLFFKYTWNNFLHLQVELCIAAILShagreeqaeagrsdgkvepvqgsgdggGKPETtpsitsPPENTMVTH 307
Cdd:pfam04499 253 LGIIPTILDLFFKYPWNNFLHNVVEDIIQQILN---------------------------GPMDF------SYNSFLVVD 299
                         330       340       350       360       370       380       390       400
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792 308 LFQKCCLVQRILEAWEANDNTQAAGGMRRGNMGHLTRIANAVVQNLEQGPVQTHISEVIRGLpaeCRGRWESFVEETLME 387
Cdd:pfam04499 300 LFTDCNLTQRILEGQKESDRFQAEKGPRLGYMGHLTLIAEEVVKFSEKYPPELISPDILEIL---ENEEWEEYVEETLEE 376

                  ....*..
gi 1958788792 388 TNRRNTV 394
Cdd:pfam04499 377 TRERYNV 383
PHA03247 PHA03247
large tegument protein UL36; Provisional
511-784 3.83e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 47.63  E-value: 3.83e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792  511 VMARA-RFGAPHTSeNYSKKAVGHGGQGRKTGSPTArnvPGLATPSSPTQKEGPRSESDSAGTTWTAVFDEPVNPLSAAS 589
Cdd:PHA03247  2582 VTSRArRPDAPPQS-ARPRAPVDDRGDPRGPAPPSP---LPPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPA 2657
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792  590 GA----ARDVGSSAWAAGPSvAEEKGW---------AKFTDFQ----PFCCSETGPRCSSPVDMDHSNAEGGQSPGPEKA 652
Cdd:PHA03247  2658 PGrvsrPRRARRLGRAAQAS-SPPQRPrrraarptvGSLTSLAdpppPPPTPEPAPHALVSATPLPPGPAAARQASPALP 2736
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792  653 FGPTSPCAWNVCVTRKAPlvasDSSSSGGSDSEDDEKAAGAVEAlcaghtgkASPPPRTAEAAAGRAECPDSTVLAPACP 732
Cdd:PHA03247  2737 AAPAPPAVPAGPATPGGP----ARPARPPTTAGPPAPAPPAAPA--------AGPPRRLTRPAVASLSESRESLPSPWDP 2804
                          250       260       270       280       290
                   ....*....|....*....|....*....|....*....|....*....|...
gi 1958788792  733 APSEVTISPAVATIAPSKA-GSPTATIVVSSSVATAVPPGPIMAVTTTAPAIV 784
Cdd:PHA03247  2805 ADPPAAVLAPAAALPPAASpAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVA 2857
PHA03247 PHA03247
large tegument protein UL36; Provisional
549-808 6.05e-05

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 46.86  E-value: 6.05e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792  549 PGLATPSSPTQKEGPRSeSDSAGTTWTAVFDEPVNPLSAASGAArDVGSSAWAAGPSVAeekgwakftdfqPFCCSETGP 628
Cdd:PHA03247  2561 PAAPDRSVPPPRPAPRP-SEPAVTSRARRPDAPPQSARPRAPVD-DRGDPRGPAPPSPL------------PPDTHAPDP 2626
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792  629 RCSSPVDMDHSNAEGGQSPGPEKAFGPTSPCAWNVCVTRKAPLVASDSSSSGGSDSEDDEKAAGAVEALCAghTGKASPP 708
Cdd:PHA03247  2627 PPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTS--LADPPPP 2704
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792  709 PRTAE---------------AAAGRAECPdSTVLAPACPAPSEVTISPAvatiAPSKAGSPTATIVVSSSVATAVPPGPI 773
Cdd:PHA03247  2705 PPTPEpaphalvsatplppgPAAARQASP-ALPAAPAPPAVPAGPATPG----GPARPARPPTTAGPPAPAPPAAPAAGP 2779
                          250       260       270
                   ....*....|....*....|....*....|....*
gi 1958788792  774 MAVTTTAPAIVATLGTMTKDRKTDALPDGAALNGP 808
Cdd:PHA03247  2780 PRRLTRPAVASLSESRESLPSPWDPADPPAAVLAP 2814
DUF5585 pfam17823
Family of unknown function (DUF5585); This is a family of unknown function found in chordata.
505-800 6.18e-05

Family of unknown function (DUF5585); This is a family of unknown function found in chordata.


Pssm-ID: 465521 [Multi-domain]  Cd Length: 506  Bit Score: 46.49  E-value: 6.18e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792 505 TRCTARVMARArfgaPHTSENYSKKAVGHGGQGRKTGSPTArNVPGLATPSSPTQKEGPRSESDSAGTTwtavfDEPVNP 584
Cdd:pfam17823  84 TEVTAEHTPHG----TDLSEPATREGAADGAASRALAAAAS-SSPSSAAQSLPAAIAALPSEAFSAPRA-----AACRAN 153
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792 585 LSAASGAARDVGSSAWAAGP------SVAEEKGWAKFTDFQPFCCSETGPRCSSPVdmdhsnaeggqSPGPEKAFGPTSP 658
Cdd:pfam17823 154 ASAAPRAAIAAASAPHAASPaprtaaSSTTAASSTTAASSAPTTAASSAPATLTPA-----------RGISTAATATGHP 222
                         170       180       190       200       210       220       230       240
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792 659 CAWNVcvTRKAPLVASDSSSSGGSDSEDDEKAAGAVealcAGHTGKAsppprTAEAAAGRAECPDSTVLAPACPAPSEVT 738
Cdd:pfam17823 223 AAGTA--LAAVGNSSPAAGTVTAAVGTVTPAALATL----AAAAGTV-----ASAAGTINMGDPHARRLSPAKHMPSDTM 291
                         250       260       270       280       290       300       310
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1958788792 739 ISPAVATIAPSKAGSPTATIVVSSSVATAVPPGPIMAVTTTAP-----------AIVATLGTMTKDRKTDALP 800
Cdd:pfam17823 292 ARNPAAPMGAQAQGPIIQVSTDQPVHNTAGEPTPSPSNTTLEPntpksvastnlAVVTTTKAQAKEPSASPVP 364
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
641-786 7.14e-05

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 45.71  E-value: 7.14e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792 641 AEGGQSPGPEKAFGPTSPCAWNVCVTRKAPLVASDSSSSGGSDSEDDEKAAGAVEALCAGHTGKASPPPRTAEAAAGRAE 720
Cdd:PTZ00436  197 AAAKQKAAAKKAAAPSGKKSAKAAAPAKAAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPPAKAAAPPAKAAA 276
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1958788792 721 CPdstvlAPACPAPSEVTISPAVATIAPSKAGSPTATIVVSSSVATAVPpgpimAVTTTAPAIVAT 786
Cdd:PTZ00436  277 PP-----AKAAAPPAKAAAPPAKAAAAPAKAAAAPAKAAAAPAKAAAPP-----AKAAAPPAKAAT 332
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
691-804 9.37e-05

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 45.33  E-value: 9.37e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792 691 AGAVEALCAGHTGKASPPPRTAEAAAGRAECPDSTVLAP---ACPAPSEVTISPAVATIAPSKAGSPTATIVVSSSVATA 767
Cdd:PTZ00436  225 AAAAPAKAAAPPAKAAAAPAKAAAAPAKAAAPPAKAAAPpakAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAAPAKAAA 304
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1958788792 768 VPP----GPIMAVTTTAPAIVATLGTMTKDRKTDALPDGAA 804
Cdd:PTZ00436  305 APAkaaaAPAKAAAPPAKAAAPPAKAATPPAKAAAPPAKAA 345
PHA03247 PHA03247
large tegument protein UL36; Provisional
693-786 2.84e-04

large tegument protein UL36; Provisional


Pssm-ID: 223021 [Multi-domain]  Cd Length: 3151  Bit Score: 44.93  E-value: 2.84e-04
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792  693 AVEALCAG-HTGKASPPPRTAEAAAGRAECP--------DSTVLAPACPAPSEVTISPAVATIAPSKAGSPTATIVVSSS 763
Cdd:PHA03247   364 SLEDLSAGrHHPKRASLPTRKRRSARHAATPfargpggdDQTRPAAPVPASVPTPAPTPVPASAPPPPATPLPSAEPGSD 443
                           90       100
                   ....*....|....*....|...
gi 1958788792  764 VATAVPPGPIMAVTTTAPAIVAT 786
Cdd:PHA03247   444 DGPAPPPERQPPAPATEPAPDDP 466
PTZ00436 PTZ00436
60S ribosomal protein L19-like protein; Provisional
689-771 3.24e-04

60S ribosomal protein L19-like protein; Provisional


Pssm-ID: 185616 [Multi-domain]  Cd Length: 357  Bit Score: 43.79  E-value: 3.24e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792 689 KAAGAVEALCAGHTGKASPPPRTAEAAAGRAECPDSTVLAPA--CPAPSEVTISPAVATIAPSKAGSPTATIVVSSSVAT 766
Cdd:PTZ00436  266 KAAAPPAKAAAPPAKAAAPPAKAAAPPAKAAAAPAKAAAAPAkaAAAPAKAAAPPAKAAAPPAKAATPPAKAAAPPAKAA 345

                  ....*
gi 1958788792 767 AVPPG 771
Cdd:PTZ00436  346 AAPVG 350
Herpes_BLLF1 pfam05109
Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 ...
699-799 3.29e-04

Herpes virus major outer envelope glycoprotein (BLLF1); This family consists of the BLLF1 viral late glycoprotein, also termed gp350/220. It is the most abundantly expressed glycoprotein in the viral envelope of the Herpesviruses and is the major antigen responsible for stimulating the production of neutralising antibodies in vivo.


Pssm-ID: 282904 [Multi-domain]  Cd Length: 886  Bit Score: 44.52  E-value: 3.29e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792 699 AGHTGKASP--PPRTAEAAAGRAECPDST--VLAPACPAPSEVTISPAVATIAPSkAGSPTATIVVSSSVATAVPP---G 771
Cdd:pfam05109 479 AGTTSGASPvtPSPSPRDNGTESKAPDMTspTSAVTTPTPNATSPTPAVTTPTPN-ATSPTLGKTSPTSAVTTPTPnatS 557
                          90       100
                  ....*....|....*....|....*...
gi 1958788792 772 PIMAVTTTAPAivATLGTMTKDRKTDAL 799
Cdd:pfam05109 558 PTPAVTTPTPN--ATIPTLGKTSPTSAV 583
PHA03307 PHA03307
transcriptional regulator ICP4; Provisional
535-772 2.28e-03

transcriptional regulator ICP4; Provisional


Pssm-ID: 223039 [Multi-domain]  Cd Length: 1352  Bit Score: 41.70  E-value: 2.28e-03
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792  535 GQGRKTGSPTARNVPGLATPSSPTQKEGP------------RSESDSAGTTWTAVFDEPVNPLSAASGAARDVGSSAWAA 602
Cdd:PHA03307    98 ASPAREGSPTPPGPSSPDPPPPTPPPASPppspapdlsemlRPVGSPGPPPAASPPAAGASPAAVASDAASSRQAALPLS 177
                           90       100       110       120       130       140       150       160
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792  603 GPSVAEEKGWAKFTDFQPFCCSETG-PRCSSPVDMDHSNAEGGQSPGPEKAFGPTSPCAWNVCVTRkaPLVASDSSSSGG 681
Cdd:PHA03307   178 SPEETARAPSSPPAEPPPSTPPAAAsPRPPRRSSPISASASSPAPAPGRSAADDAGASSSDSSSSE--SSGCGWGPENEC 255
                          170       180       190       200       210       220       230       240
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792  682 SDSEDDEKAAGAVEALCAGHTGKASPPPRTAEAAAGRAECPDSTVLAPACP-APSEVTISPAVATIAPSKAGSPTATIVV 760
Cdd:PHA03307   256 PLPRPAPITLPTRIWEASGWNGPSSRPGPASSSSSPRERSPSPSPSSPGSGpAPSSPRASSSSSSSRESSSSSTSSSSES 335
                          250
                   ....*....|..
gi 1958788792  761 SSSvaTAVPPGP 772
Cdd:PHA03307   336 SRG--AAVSPGP 345
PRK14951 PRK14951
DNA polymerase III subunits gamma and tau; Provisional
709-786 5.06e-03

DNA polymerase III subunits gamma and tau; Provisional


Pssm-ID: 237865 [Multi-domain]  Cd Length: 618  Bit Score: 40.47  E-value: 5.06e-03
                          10        20        30        40        50        60        70
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1958788792 709 PRTAEAAAGRAEcpDSTVLAPACPAPSEVTISPAVATIAPSKAgsPTATIVVSSSVATAVPPGPIMAVTTTAPAIVAT 786
Cdd:PRK14951  366 PAAAAEAAAPAE--KKTPARPEAAAPAAAPVAQAAAAPAPAAA--PAAAASAPAAPPAAAPPAPVAAPAAAAPAAAPA 439
PRK10856 PRK10856
cytoskeleton protein RodZ;
702-785 8.57e-03

cytoskeleton protein RodZ;


Pssm-ID: 236776 [Multi-domain]  Cd Length: 331  Bit Score: 39.24  E-value: 8.57e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1958788792 702 TGKASPPPRTAEAAAGRAECPDSTVLAPACPAPSEVTISPAVATIAPSKAGSPTATIVVSSSVA--TAVPPGPIMAVTTT 779
Cdd:PRK10856  166 TSTTTDPATTPAPAAPVDTTPTNSQTPAVATAPAPAVDPQQNAVVAPSQANVDTAATPAPAAPAtpDGAAPLPTDQAGVS 245

                  ....*.
gi 1958788792 780 APAIVA 785
Cdd:PRK10856  246 TPAADP 251
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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