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Concise Results
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limbin isoform X3 [Mus musculus]
Protein Classification
List of domain hits
Name
Accession
Description
Interval
E-value
EVC2_like super family
cl26314 Ellis van Creveld protein 2 like protein; This family of proteins is found in eukaryotes. ...
1-250
9.03e-115
Ellis van Creveld protein 2 like protein; This family of proteins is found in eukaryotes. Proteins in this family are typically between 571 and 1310 amino acids in length. There are two conserved sequence motifs: LPA and ELH. EVC2 is implicated in Ellis van Creveld chondrodysplastic dwarfism in humans. Mutations in this protein can give rise to this congenital condition. LIMBIN is a protein which shares around 80% sequence homology with EVC2 and it is implicated in a similar condition in bovine chondrodysplastic dwarfism.
pfam12297 :Pssm-ID: 463525 [Multi-domain]
Cd Length: 428
Bit Score: 357.47
E-value: 9.03e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 1 M KNL V S G GHLSPQ T E RK M AAA F K KQFL LL E NEI QEEYERKM L AL T AEC D LE M R K K T E N Q Y QREM VAM EEAEE V LK RVS E R 80
Cdd:pfam12297 179 L KNL R S S GHLSPQ A E KR M SSV F N KQFL AM E GRL QEEYERKM A AL A AEC N LE T R E K M E A Q H QREM AEK EEAEE L LK HAD E Q 258
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 81 S A A ECSSLL RT LH G LEQE DM QRSL T L D Q A EDFA Q A H RQLAVFQR N ELH S I VY TQ IQS A VS KGEL R PE V AK MM LQDYSK T Q 160
Cdd:pfam12297 259 E A L ECSSLL DK LH K LEQE HL QRSL L L R Q E EDFA K A Q RQLAVFQR V ELH K I FF TQ LKE A TR KGEL K PE A AK RL LQDYSK I Q 338
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 161 E SV EELMDFFQA TK RYHLS K RF GH REYLVQ R LQ AM ETRV Q GLLNTAATQLTSLI H K H ERAGYLDE D QME T LLERAQ T E TF 240
Cdd:pfam12297 339 E QI EELMDFFQA NQ RYHLS E RF AQ REYLVQ S LQ SL ETRV S GLLNTAATQLTSLI Q K M ERAGYLDE E QME M LLERAQ K E LL 418
250
....*....|
gi 1907165931 241 S I KQKLDNDL 250
Cdd:pfam12297 419 S V KQKLDNDL 428
Smc super family
cl34174 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
185-667
1.06e-09
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
COG1196 :Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 62.26
E-value: 1.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 185 R EY L VQ RL QAM E TRVQG L LNTAATQLTS L IHKH E RAGYLD E DQM E TLL E R A QT E tfsik QK L DNDLKQEKKR lh QRLITR 264
Cdd:COG1196 311 R RE L EE RL EEL E EELAE L EEELEELEEE L EELE E ELEEAE E ELE E AEA E L A EA E ----- EA L LEAEAELAEA -- EEELEE 383
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 265 RRR ELL QKHKEQQKEQVS L G E ASSTA E DAVQY L HQWRSVMA E HTA AL E EL Q E RLDQAALDDLRVLTVSLSEKAT EE LRRL 344
Cdd:COG1196 384 LAE ELL EALRAAAELAAQ L E E LEEAE E ALLER L ERLEEELE E LEE AL A EL E E EEEEEEEALEEAAEEEAELEEE EE ALLE 463
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 345 QSTAMTQ E LLKRS A pwl F L QQI LEE HSRES A ARTTQ LEAE ERER G qe LVQ GV RQR L QQDA L EAYTEEQ A E L RHW E HLVFM 424
Cdd:COG1196 464 LLAELLE E AALLE A --- A L AEL LEE LAEAA A RLLLL LEAE ADYE G -- FLE GV KAA L LLAG L RGLAGAV A V L IGV E AAYEA 538
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 425 K L CC A AISLSEEDLLRVRQE A QGCFSQ L d RSLALP R VRARV L QQQAQM A WRE A EFRKLDQAL A APELQ S KA R KLRSKGRG 504
Cdd:COG1196 539 A L EA A LAAALQNIVVEDDEV A AAAIEY L - KAAKAG R ATFLP L DKIRAR A ALA A ALARGAIGA A VDLVA S DL R EADARYYV 617
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 505 KA D - LL KKN L EDKIRLFEE R AP V E LA DQV R GEL L QERVQRLEAQEAHFAESLVALQFQKVARAA E T L svytallsi QDL L 583
Cdd:COG1196 618 LG D t LL GRT L VAARLEAAL R RA V T LA GRL R EVT L EGEGGSAGGSLTGGSRRELLAALLEAEAEL E E L --------- AER L 688
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 584 LG E LS E S E TLTKSACVQIL E SHRP E LQE L Q E LERKLEDQLVQQE E A E QQRVLESWQRWAADGPG L S E PE E MDPERQVSAI 663
Cdd:COG1196 689 AE E EL E L E EALLAEEEEER E LAEA E EER L E E ELEEEALEEQLEA E R E ELLEELLEEEELLEEEA L E E LP E PPDLEELERE 768
....
gi 1907165931 664 L RQA 667
Cdd:COG1196 769 L ERL 772
Name
Accession
Description
Interval
E-value
EVC2_like
pfam12297 Ellis van Creveld protein 2 like protein; This family of proteins is found in eukaryotes. ...
1-250
9.03e-115
Ellis van Creveld protein 2 like protein; This family of proteins is found in eukaryotes. Proteins in this family are typically between 571 and 1310 amino acids in length. There are two conserved sequence motifs: LPA and ELH. EVC2 is implicated in Ellis van Creveld chondrodysplastic dwarfism in humans. Mutations in this protein can give rise to this congenital condition. LIMBIN is a protein which shares around 80% sequence homology with EVC2 and it is implicated in a similar condition in bovine chondrodysplastic dwarfism.
Pssm-ID: 463525 [Multi-domain]
Cd Length: 428
Bit Score: 357.47
E-value: 9.03e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 1 M KNL V S G GHLSPQ T E RK M AAA F K KQFL LL E NEI QEEYERKM L AL T AEC D LE M R K K T E N Q Y QREM VAM EEAEE V LK RVS E R 80
Cdd:pfam12297 179 L KNL R S S GHLSPQ A E KR M SSV F N KQFL AM E GRL QEEYERKM A AL A AEC N LE T R E K M E A Q H QREM AEK EEAEE L LK HAD E Q 258
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 81 S A A ECSSLL RT LH G LEQE DM QRSL T L D Q A EDFA Q A H RQLAVFQR N ELH S I VY TQ IQS A VS KGEL R PE V AK MM LQDYSK T Q 160
Cdd:pfam12297 259 E A L ECSSLL DK LH K LEQE HL QRSL L L R Q E EDFA K A Q RQLAVFQR V ELH K I FF TQ LKE A TR KGEL K PE A AK RL LQDYSK I Q 338
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 161 E SV EELMDFFQA TK RYHLS K RF GH REYLVQ R LQ AM ETRV Q GLLNTAATQLTSLI H K H ERAGYLDE D QME T LLERAQ T E TF 240
Cdd:pfam12297 339 E QI EELMDFFQA NQ RYHLS E RF AQ REYLVQ S LQ SL ETRV S GLLNTAATQLTSLI Q K M ERAGYLDE E QME M LLERAQ K E LL 418
250
....*....|
gi 1907165931 241 S I KQKLDNDL 250
Cdd:pfam12297 419 S V KQKLDNDL 428
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
185-667
1.06e-09
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 62.26
E-value: 1.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 185 R EY L VQ RL QAM E TRVQG L LNTAATQLTS L IHKH E RAGYLD E DQM E TLL E R A QT E tfsik QK L DNDLKQEKKR lh QRLITR 264
Cdd:COG1196 311 R RE L EE RL EEL E EELAE L EEELEELEEE L EELE E ELEEAE E ELE E AEA E L A EA E ----- EA L LEAEAELAEA -- EEELEE 383
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 265 RRR ELL QKHKEQQKEQVS L G E ASSTA E DAVQY L HQWRSVMA E HTA AL E EL Q E RLDQAALDDLRVLTVSLSEKAT EE LRRL 344
Cdd:COG1196 384 LAE ELL EALRAAAELAAQ L E E LEEAE E ALLER L ERLEEELE E LEE AL A EL E E EEEEEEEALEEAAEEEAELEEE EE ALLE 463
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 345 QSTAMTQ E LLKRS A pwl F L QQI LEE HSRES A ARTTQ LEAE ERER G qe LVQ GV RQR L QQDA L EAYTEEQ A E L RHW E HLVFM 424
Cdd:COG1196 464 LLAELLE E AALLE A --- A L AEL LEE LAEAA A RLLLL LEAE ADYE G -- FLE GV KAA L LLAG L RGLAGAV A V L IGV E AAYEA 538
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 425 K L CC A AISLSEEDLLRVRQE A QGCFSQ L d RSLALP R VRARV L QQQAQM A WRE A EFRKLDQAL A APELQ S KA R KLRSKGRG 504
Cdd:COG1196 539 A L EA A LAAALQNIVVEDDEV A AAAIEY L - KAAKAG R ATFLP L DKIRAR A ALA A ALARGAIGA A VDLVA S DL R EADARYYV 617
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 505 KA D - LL KKN L EDKIRLFEE R AP V E LA DQV R GEL L QERVQRLEAQEAHFAESLVALQFQKVARAA E T L svytallsi QDL L 583
Cdd:COG1196 618 LG D t LL GRT L VAARLEAAL R RA V T LA GRL R EVT L EGEGGSAGGSLTGGSRRELLAALLEAEAEL E E L --------- AER L 688
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 584 LG E LS E S E TLTKSACVQIL E SHRP E LQE L Q E LERKLEDQLVQQE E A E QQRVLESWQRWAADGPG L S E PE E MDPERQVSAI 663
Cdd:COG1196 689 AE E EL E L E EALLAEEEEER E LAEA E EER L E E ELEEEALEEQLEA E R E ELLEELLEEEELLEEEA L E E LP E PPDLEELERE 768
....
gi 1907165931 664 L RQA 667
Cdd:COG1196 769 L ERL 772
DUF3584
pfam12128 Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ...
188-684
2.29e-04
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain]
Cd Length: 1191
Bit Score: 45.21
E-value: 2.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 188 LVQRLQAMETRVQG L LNTAA T QLT ----- S LI H KHERA gyl DE DQMETLL E RA Q TETFSIK Q K L --- D NDL K QEKKR L HQ 259
Cdd:pfam12128 232 AIAGIMKIRPEFTK L QQEFN T LES aelrl S HL H FGYKS --- DE TLIASRQ E ER Q ETSAELN Q L L rtl D DQW K EKRDE L NG 308
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 260 R L IT rrrrell QKHKEQQKE - QVSLG E ASST A -- EDAVQYLHQWRSVMAEHTAA LE E L Q ERL D q A ALDDLR vl T V SLSEK 336
Cdd:pfam12128 309 E L SA ------- ADAAVAKDR s ELEAL E DQHG A fl DADIETAAADQEQLPSWQSE LE N L E ERL K - A LTGKHQ -- D V TAKYN 378
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 337 ATEELRRL Q STAMTQELLKRS A P wlflqqileeh S RE SAA R ttq LE A EERERG Q E L VQGV R QR L QQDA LE A yte EQA E L R 416
Cdd:pfam12128 379 RRRSKIKE Q NNRDIAGIKDKL A K ----------- I RE ARD R --- QL A VAEDDL Q A L ESEL R EQ L EAGK LE F --- NEE E Y R 441
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 417 HWEH L VFM KL CCAAISLSE E D LL RVR --------- Q E A Q GCFSQLDRS L ALPRVR AR VLQQ QA QM A W R E A EF R KLDQAL A 487
Cdd:pfam12128 442 LKSR L GEL KL RLNQATATP E L LL QLE nfderiera R E E Q EAANAEVER L QSELRQ AR KRRD QA SE A L R Q A SR R LEERQS A 521
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 488 AP EL Q -------- SKARK LR SKGRGKADLLK K NLEDKIRLFEERA P VELADQ V R GEL ---- LQERVQ R LEAQ E AHFA E SL 555
Cdd:pfam12128 522 LD EL E lqlfpqag TLLHF LR KEAPDWEQSIG K VISPELLHRTDLD P EVWDGS V G GEL nlyg VKLDLK R IDVP E WAAS E EE 601
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 556 VALQFQ K VAR A AETLSVYT A LLSI Q DLL ---- L GEL S ES ET LTKS A cvqi L ESH R PE L QE L QELERKLE D QLVQQEEAEQ 631
Cdd:pfam12128 602 LRERLD K AEE A LQSAREKQ A AAEE Q LVQ ange L EKA S RE ET FART A ---- L KNA R LD L RR L FDEKQSEK D KKNKALAERK 677
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 1907165931 632 QRVL E S wqrwaadgpglsepeemdp ERQVS A I L R Q ALN K G Q KL LE QHQQRV RE 684
Cdd:pfam12128 678 DSAN E R ------------------- LNSLE A Q L K Q LDK K H Q AW LE EQKEQK RE 711
PTZ00121
PTZ00121 MAEBL; Provisional
217-681
1.72e-03
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 42.44
E-value: 1.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 217 H E RAGYLD E DQ M ETLLE R AQTETFSIKQ K L D NDL K Q E K K RLHQRLITRRRRELLQKH K EQQK E QVSLG EA SST AE D A VQY 296
Cdd:PTZ00121 1251 N E EIRKFE E AR M AHFAR R QAAIKAEEAR K A D ELK K A E E K KKADEAKKAEEKKKADEA K KKAE E AKKAD EA KKK AE E A KKK 1330
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 297 LHQWRS v M AE HTAALE E LQERLDQ AA L D DLR vltv SLS EKA TEELRRLQSTAMTQELL K RS A PWLFLQQILEEHSR E SAA 376
Cdd:PTZ00121 1331 ADAAKK - K AE EAKKAA E AAKAEAE AA A D EAE ---- AAE EKA EAAEKKKEEAKKKADAA K KK A EEKKKADEAKKKAE E DKK 1405
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 377 RTTQ L E -- A EERERGQ E LVQGVRQR ----- LQQD A L EA YTEEQ A ELRHW E HLVFMKLCCA A ISLSEE D LLRVRQ E AQGCF 449
Cdd:PTZ00121 1406 KADE L K ka A AAKKKAD E AKKKAEEK kkade AKKK A E EA KKADE A KKKAE E AKKAEEAKKK A EEAKKA D EAKKKA E EAKKA 1485
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 450 SQLDRSLALPRVR A RVLQQQ A QMAWREA E FR K LDQ A LA A P E LQSKARKLRSKGRG KA DLL KK NL E ---- DKIRLF EE RAP 525
Cdd:PTZ00121 1486 DEAKKKAEEAKKK A DEAKKA A EAKKKAD E AK K AEE A KK A D E AKKAEEAKKADEAK KA EEK KK AD E lkka EELKKA EE KKK 1565
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 526 V E --- L A DQVRGEL L QERVQRLE A Q EA HFA E SLVALQFQ K VAR A A E TLSVYT A LLSIQD L llgels ESETLT K SACV Q IL 602
Cdd:PTZ00121 1566 A E eak K A EEDKNMA L RKAEEAKK A E EA RIE E VMKLYEEE K KMK A E E AKKAEE A KIKAEE L ------ KKAEEE K KKVE Q LK 1639
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 603 ESHRP E LQELQ EL ERKL E DQLVQQE E ----------- AE QQRVL E SWQRW AA DGPG l S E P EE MDPERQVSAILRQALN K G 671
Cdd:PTZ00121 1640 KKEAE E KKKAE EL KKAE E ENKIKAA E eakkaeedkkk AE EAKKA E EDEKK AA EALK - K E A EE AKKAEELKKKEAEEKK K A 1718
490
....*....|
gi 1907165931 672 QK L LEQHQQR 681
Cdd:PTZ00121 1719 EE L KKAEEEN 1728
Name
Accession
Description
Interval
E-value
EVC2_like
pfam12297 Ellis van Creveld protein 2 like protein; This family of proteins is found in eukaryotes. ...
1-250
9.03e-115
Ellis van Creveld protein 2 like protein; This family of proteins is found in eukaryotes. Proteins in this family are typically between 571 and 1310 amino acids in length. There are two conserved sequence motifs: LPA and ELH. EVC2 is implicated in Ellis van Creveld chondrodysplastic dwarfism in humans. Mutations in this protein can give rise to this congenital condition. LIMBIN is a protein which shares around 80% sequence homology with EVC2 and it is implicated in a similar condition in bovine chondrodysplastic dwarfism.
Pssm-ID: 463525 [Multi-domain]
Cd Length: 428
Bit Score: 357.47
E-value: 9.03e-115
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 1 M KNL V S G GHLSPQ T E RK M AAA F K KQFL LL E NEI QEEYERKM L AL T AEC D LE M R K K T E N Q Y QREM VAM EEAEE V LK RVS E R 80
Cdd:pfam12297 179 L KNL R S S GHLSPQ A E KR M SSV F N KQFL AM E GRL QEEYERKM A AL A AEC N LE T R E K M E A Q H QREM AEK EEAEE L LK HAD E Q 258
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 81 S A A ECSSLL RT LH G LEQE DM QRSL T L D Q A EDFA Q A H RQLAVFQR N ELH S I VY TQ IQS A VS KGEL R PE V AK MM LQDYSK T Q 160
Cdd:pfam12297 259 E A L ECSSLL DK LH K LEQE HL QRSL L L R Q E EDFA K A Q RQLAVFQR V ELH K I FF TQ LKE A TR KGEL K PE A AK RL LQDYSK I Q 338
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 161 E SV EELMDFFQA TK RYHLS K RF GH REYLVQ R LQ AM ETRV Q GLLNTAATQLTSLI H K H ERAGYLDE D QME T LLERAQ T E TF 240
Cdd:pfam12297 339 E QI EELMDFFQA NQ RYHLS E RF AQ REYLVQ S LQ SL ETRV S GLLNTAATQLTSLI Q K M ERAGYLDE E QME M LLERAQ K E LL 418
250
....*....|
gi 1907165931 241 S I KQKLDNDL 250
Cdd:pfam12297 419 S V KQKLDNDL 428
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
185-667
1.06e-09
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 62.26
E-value: 1.06e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 185 R EY L VQ RL QAM E TRVQG L LNTAATQLTS L IHKH E RAGYLD E DQM E TLL E R A QT E tfsik QK L DNDLKQEKKR lh QRLITR 264
Cdd:COG1196 311 R RE L EE RL EEL E EELAE L EEELEELEEE L EELE E ELEEAE E ELE E AEA E L A EA E ----- EA L LEAEAELAEA -- EEELEE 383
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 265 RRR ELL QKHKEQQKEQVS L G E ASSTA E DAVQY L HQWRSVMA E HTA AL E EL Q E RLDQAALDDLRVLTVSLSEKAT EE LRRL 344
Cdd:COG1196 384 LAE ELL EALRAAAELAAQ L E E LEEAE E ALLER L ERLEEELE E LEE AL A EL E E EEEEEEEALEEAAEEEAELEEE EE ALLE 463
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 345 QSTAMTQ E LLKRS A pwl F L QQI LEE HSRES A ARTTQ LEAE ERER G qe LVQ GV RQR L QQDA L EAYTEEQ A E L RHW E HLVFM 424
Cdd:COG1196 464 LLAELLE E AALLE A --- A L AEL LEE LAEAA A RLLLL LEAE ADYE G -- FLE GV KAA L LLAG L RGLAGAV A V L IGV E AAYEA 538
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 425 K L CC A AISLSEEDLLRVRQE A QGCFSQ L d RSLALP R VRARV L QQQAQM A WRE A EFRKLDQAL A APELQ S KA R KLRSKGRG 504
Cdd:COG1196 539 A L EA A LAAALQNIVVEDDEV A AAAIEY L - KAAKAG R ATFLP L DKIRAR A ALA A ALARGAIGA A VDLVA S DL R EADARYYV 617
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 505 KA D - LL KKN L EDKIRLFEE R AP V E LA DQV R GEL L QERVQRLEAQEAHFAESLVALQFQKVARAA E T L svytallsi QDL L 583
Cdd:COG1196 618 LG D t LL GRT L VAARLEAAL R RA V T LA GRL R EVT L EGEGGSAGGSLTGGSRRELLAALLEAEAEL E E L --------- AER L 688
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 584 LG E LS E S E TLTKSACVQIL E SHRP E LQE L Q E LERKLEDQLVQQE E A E QQRVLESWQRWAADGPG L S E PE E MDPERQVSAI 663
Cdd:COG1196 689 AE E EL E L E EALLAEEEEER E LAEA E EER L E E ELEEEALEEQLEA E R E ELLEELLEEEELLEEEA L E E LP E PPDLEELERE 768
....
gi 1907165931 664 L RQA 667
Cdd:COG1196 769 L ERL 772
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
190-620
7.66e-05
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 46.47
E-value: 7.66e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 190 QR L QAMETRVQGL L NT A ATQ L TSLIHKHER A GYLDEDQMET L L E RAQTETFSIKQK L DNDLKQEKKRLHQRLITRRRRE L 269
Cdd:COG1196 333 EE L EEELEELEEE L EE A EEE L EEAEAELAE A EEALLEAEAE L A E AEEELEELAEEL L EALRAAAELAAQLEELEEAEEA L 412
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 270 L QKHKEQQK E QVS L G EA SSTA E DAVQYLHQWRSVM AE HT A A LEE LQ E R L DQAALDD L RVLT vs L S E K A TE EL RRLQST A M 349
Cdd:COG1196 413 L ERLERLEE E LEE L E EA LAEL E EEEEEEEEALEEA AE EE A E LEE EE E A L LELLAEL L EEAA -- L L E A A LA EL LEELAE A A 490
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 350 TQE LL KRS A --- PWL FL QQILEEHSRESAARTTQLE A EERERGQELVQGVRQR L QQDALEAYT E - EQAELRHW E H L VFM K 425
Cdd:COG1196 491 ARL LL LLE A ead YEG FL EGVKAALLLAGLRGLAGAV A VLIGVEAAYEAALEAA L AAALQNIVV E d DEVAAAAI E Y L KAA K 570
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 426 LCC A AI -------------------- SLSEE DL LRVRQEAQGCFSQLDRSLA L P R VRARVLQQQ A QMAWREAEF R KLDQA 485
Cdd:COG1196 571 AGR A TF lpldkiraraalaaalarga IGAAV DL VASDLREADARYYVLGDTL L G R TLVAARLEA A LRRAVTLAG R LREVT 650
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 486 L AAPELQSKARKLRSKG R GKADL L KKNLEDKIR L F E ER A pv E LADQVRGE LL Q E RVQRL E AQ EA HFAESLVA L QFQKVAR 565
Cdd:COG1196 651 L EGEGGSAGGSLTGGSR R ELLAA L LEAEAELEE L A E RL A -- E EELELEEA LL A E EEEER E LA EA EEERLEEE L EEEALEE 728
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....*
gi 1907165931 566 AA E TLSVYTALLSIQDLL L G E LSES E T L TKSACVQI LE S hrp EL QE L QELERK L E 620
Cdd:COG1196 729 QL E AEREELLEELLEEEE L L E EEAL E E L PEPPDLEE LE R --- EL ER L EREIEA L G 780
DUF3584
pfam12128 Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ...
188-684
2.29e-04
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain]
Cd Length: 1191
Bit Score: 45.21
E-value: 2.29e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 188 LVQRLQAMETRVQG L LNTAA T QLT ----- S LI H KHERA gyl DE DQMETLL E RA Q TETFSIK Q K L --- D NDL K QEKKR L HQ 259
Cdd:pfam12128 232 AIAGIMKIRPEFTK L QQEFN T LES aelrl S HL H FGYKS --- DE TLIASRQ E ER Q ETSAELN Q L L rtl D DQW K EKRDE L NG 308
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 260 R L IT rrrrell QKHKEQQKE - QVSLG E ASST A -- EDAVQYLHQWRSVMAEHTAA LE E L Q ERL D q A ALDDLR vl T V SLSEK 336
Cdd:pfam12128 309 E L SA ------- ADAAVAKDR s ELEAL E DQHG A fl DADIETAAADQEQLPSWQSE LE N L E ERL K - A LTGKHQ -- D V TAKYN 378
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 337 ATEELRRL Q STAMTQELLKRS A P wlflqqileeh S RE SAA R ttq LE A EERERG Q E L VQGV R QR L QQDA LE A yte EQA E L R 416
Cdd:pfam12128 379 RRRSKIKE Q NNRDIAGIKDKL A K ----------- I RE ARD R --- QL A VAEDDL Q A L ESEL R EQ L EAGK LE F --- NEE E Y R 441
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 417 HWEH L VFM KL CCAAISLSE E D LL RVR --------- Q E A Q GCFSQLDRS L ALPRVR AR VLQQ QA QM A W R E A EF R KLDQAL A 487
Cdd:pfam12128 442 LKSR L GEL KL RLNQATATP E L LL QLE nfderiera R E E Q EAANAEVER L QSELRQ AR KRRD QA SE A L R Q A SR R LEERQS A 521
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 488 AP EL Q -------- SKARK LR SKGRGKADLLK K NLEDKIRLFEERA P VELADQ V R GEL ---- LQERVQ R LEAQ E AHFA E SL 555
Cdd:pfam12128 522 LD EL E lqlfpqag TLLHF LR KEAPDWEQSIG K VISPELLHRTDLD P EVWDGS V G GEL nlyg VKLDLK R IDVP E WAAS E EE 601
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 556 VALQFQ K VAR A AETLSVYT A LLSI Q DLL ---- L GEL S ES ET LTKS A cvqi L ESH R PE L QE L QELERKLE D QLVQQEEAEQ 631
Cdd:pfam12128 602 LRERLD K AEE A LQSAREKQ A AAEE Q LVQ ange L EKA S RE ET FART A ---- L KNA R LD L RR L FDEKQSEK D KKNKALAERK 677
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|...
gi 1907165931 632 QRVL E S wqrwaadgpglsepeemdp ERQVS A I L R Q ALN K G Q KL LE QHQQRV RE 684
Cdd:pfam12128 678 DSAN E R ------------------- LNSLE A Q L K Q LDK K H Q AW LE EQKEQK RE 711
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
185-547
5.59e-04
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 43.77
E-value: 5.59e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 185 R E Y L VQ RL QAM E TRVQG L LNTA A TQLTSLIHKH E RAGYLD E DQM E TLL E RAQTETFSIKQKLDND L KQEK - KR L HQR L IT 263
Cdd:COG1196 409 E E A L LE RL ERL E EELEE L EEAL A ELEEEEEEEE E ALEEAA E EEA E LEE E EEALLELLAELLEEAA L LEAA l AE L LEE L AE 488
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 264 RRR R E LL QKHK E QQK E QVSL G EASSTAEDAVQY L HQWRS V MAEHT AA L E ELQ E RLDQ AAL DDLR V LTVSLSEK A T E E L RR 343
Cdd:COG1196 489 AAA R L LL LLEA E ADY E GFLE G VKAALLLAGLRG L AGAVA V LIGVE AA Y E AAL E AALA AAL QNIV V EDDEVAAA A I E Y L KA 568
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 344 LQSTAM T QEL L KRSAPWLF L QQI L EEHSRES A ARTTQLEAE E RERGQELVQG -- VRQR L QQDA LEA YTEEQAE L RHWEHL 421
Cdd:COG1196 569 AKAGRA T FLP L DKIRARAA L AAA L ARGAIGA A VDLVASDLR E ADARYYVLGD tl LGRT L VAAR LEA ALRRAVT L AGRLRE 648
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 422 V F mklcc AAISLSEEDLLRVRQEAQGCFSQ L DRSL A LPRVR A RV L QQQAQMAWREAEFRKLDQALA A PELQSKARKLRSK 501
Cdd:COG1196 649 V T ----- LEGEGGSAGGSLTGGSRRELLAA L LEAE A ELEEL A ER L AEEELELEEALLAEEEEEREL A EAEEERLEEELEE 723
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|..
gi 1907165931 502 GRGKAD L LKKNL E DKIR L F EE RAPV E LADQVRGEL ------ L QERVQ RLE AQ 547
Cdd:COG1196 724 EALEEQ L EAERE E LLEE L L EE EELL E EEALEELPE ppdlee L ERELE RLE RE 775
PTZ00121
PTZ00121 MAEBL; Provisional
217-681
1.72e-03
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 42.44
E-value: 1.72e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 217 H E RAGYLD E DQ M ETLLE R AQTETFSIKQ K L D NDL K Q E K K RLHQRLITRRRRELLQKH K EQQK E QVSLG EA SST AE D A VQY 296
Cdd:PTZ00121 1251 N E EIRKFE E AR M AHFAR R QAAIKAEEAR K A D ELK K A E E K KKADEAKKAEEKKKADEA K KKAE E AKKAD EA KKK AE E A KKK 1330
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 297 LHQWRS v M AE HTAALE E LQERLDQ AA L D DLR vltv SLS EKA TEELRRLQSTAMTQELL K RS A PWLFLQQILEEHSR E SAA 376
Cdd:PTZ00121 1331 ADAAKK - K AE EAKKAA E AAKAEAE AA A D EAE ---- AAE EKA EAAEKKKEEAKKKADAA K KK A EEKKKADEAKKKAE E DKK 1405
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 377 RTTQ L E -- A EERERGQ E LVQGVRQR ----- LQQD A L EA YTEEQ A ELRHW E HLVFMKLCCA A ISLSEE D LLRVRQ E AQGCF 449
Cdd:PTZ00121 1406 KADE L K ka A AAKKKAD E AKKKAEEK kkade AKKK A E EA KKADE A KKKAE E AKKAEEAKKK A EEAKKA D EAKKKA E EAKKA 1485
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 450 SQLDRSLALPRVR A RVLQQQ A QMAWREA E FR K LDQ A LA A P E LQSKARKLRSKGRG KA DLL KK NL E ---- DKIRLF EE RAP 525
Cdd:PTZ00121 1486 DEAKKKAEEAKKK A DEAKKA A EAKKKAD E AK K AEE A KK A D E AKKAEEAKKADEAK KA EEK KK AD E lkka EELKKA EE KKK 1565
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 526 V E --- L A DQVRGEL L QERVQRLE A Q EA HFA E SLVALQFQ K VAR A A E TLSVYT A LLSIQD L llgels ESETLT K SACV Q IL 602
Cdd:PTZ00121 1566 A E eak K A EEDKNMA L RKAEEAKK A E EA RIE E VMKLYEEE K KMK A E E AKKAEE A KIKAEE L ------ KKAEEE K KKVE Q LK 1639
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 603 ESHRP E LQELQ EL ERKL E DQLVQQE E ----------- AE QQRVL E SWQRW AA DGPG l S E P EE MDPERQVSAILRQALN K G 671
Cdd:PTZ00121 1640 KKEAE E KKKAE EL KKAE E ENKIKAA E eakkaeedkkk AE EAKKA E EDEKK AA EALK - K E A EE AKKAEELKKKEAEEKK K A 1718
490
....*....|
gi 1907165931 672 QK L LEQHQQR 681
Cdd:PTZ00121 1719 EE L KKAEEEN 1728
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
462-705
2.43e-03
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 41.85
E-value: 2.43e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 462 R A RVLQQQ A QM A WR EAE FRK L DQA L AAP EL QSKARKLR -------- SKGRGKADL L KKNLEDKIRLF EE RAPVELADQVR 533
Cdd:COG1196 252 E A ELEELE A EL A EL EAE LEE L RLE L EEL EL ELEEAQAE eyellael ARLEQDIAR L EERRRELEERL EE LEEELAELEEE 331
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 534 G E L L Q E RVQR LE AQEAHFA E S L VALQFQKVARAAET L SVYTA L LSIQDL L LGELS E SETLTKS A CVQILESHRP E LQ E LQ 613
Cdd:COG1196 332 L E E L E E ELEE LE EELEEAE E E L EEAEAELAEAEEAL L EAEAE L AEAEEE L EELAE E LLEALRA A AELAAQLEEL E EA E EA 411
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 614 E LER -- K LE DQ L VQQ EEA EQQRVL E SWQRWA A DGPGLS E PE E MDP E RQVSAI L RQA L NKGQK LLE QHQQRVR EE WQNG A V 691
Cdd:COG1196 412 L LER le R LE EE L EEL EEA LAELEE E EEEEEE A LEEAAE E EA E LEE E EEALLE L LAE L LEEAA LLE AALAELL EE LAEA A A 491
250
....*....|....
gi 1907165931 692 LEDS L ESI EAD TMA 705
Cdd:COG1196 492 RLLL L LEA EAD YEG 505
PRK12704
PRK12704 phosphodiesterase; Provisional
225-390
2.59e-03
phosphodiesterase; Provisional
Pssm-ID: 237177 [Multi-domain]
Cd Length: 520
Bit Score: 41.30
E-value: 2.59e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 225 E DQMETL LE R A QT E TFS IK QKLDNDL K Q E --- KKRLHQRLITR RR R EL LQKH K E - Q QKE Q v S L GEASSTA E DAVQY L HQW 300
Cdd:PRK12704 37 E EEAKRI LE E A KK E AEA IK KEALLEA K E E ihk LRNEFEKELRE RR N EL QKLE K R l L QKE E - N L DRKLELL E KREEE L EKK 115
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 301 RSVMAEHTAA LE ELQ E R L D qaalddlrvltvsls E KAT E E L RR L QSTA - M T Q E LL K R sapw LF L QQIL EE HSR E S A ARTT 379
Cdd:PRK12704 116 EKELEQKQQE LE KKE E E L E --------------- E LIE E Q L QE L ERIS g L T A E EA K E ---- IL L EKVE EE ARH E A A VLIK 176
170
....*....|.
gi 1907165931 380 QL E A E ER E RGQ 390
Cdd:PRK12704 177 EI E E E AK E EAD 187
DUF5401
pfam17380 Family of unknown function (DUF5401); This is a family of unknown function found in ...
229-547
2.63e-03
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain]
Cd Length: 722
Bit Score: 41.65
E-value: 2.63e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 229 ETLL ER A Q T E T F sik Q K LDND - L K QEK KRLHQRL it R RRR E L LQKH K EQ Q K E qvslgeass TAED A VQ Y LH Q W R SV M a E H 307
Cdd:pfam17380 282 KAVS ER Q Q Q E K F --- E K MEQE r L R QEK EEKAREV -- E RRR K L EEAE K AR Q A E --------- MDRQ A AI Y AE Q E R MA M - E R 346
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 308 TAA LE ELQERLDQAA L DDL R VLTVSLSEKATE EL R RLQ stamtqel LK R SAPWLFLQ Q I LE ehsres AAR TTQLEA EER E 387
Cdd:pfam17380 347 ERE LE RIRQEERKRE L ERI R QEEIAMEISRMR EL E RLQ -------- ME R QQKNERVR Q E LE ------ AAR KVKILE EER Q 412
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 388 R gqelvqgv RQRL Q QDAL E AYTE EQ A E L R HW E HLVFMK lccaais LSEEDLL RVR Q E A Q GCFS Q LD R SLALPRV R A R VLQ 467
Cdd:pfam17380 413 R -------- KIQQ Q KVEM E QIRA EQ E E A R QR E VRRLEE ------- ERAREME RVR L E E Q ERQQ Q VE R LRQQEEE R K R KKL 477
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 468 QQAQMAWREAEFRKLDQALAAP EL QSKARKLRSKG R g K AD LL K K NL E DKIR - LF EE RAPV E LADQV R GELLQ E RVQ R LEA 546
Cdd:pfam17380 478 ELEKEKRDRKRAEEQRRKILEK EL EERKQAMIEEE R - K RK LL E K EM E ERQK a IY EE ERRR E AEEER R KQQEM E ERR R IQE 556
.
gi 1907165931 547 Q 547
Cdd:pfam17380 557 Q 557
PLN03094
PLN03094 Substrate binding subunit of ER-derived-lipid transporter; Provisional
276-357
8.10e-03
Substrate binding subunit of ER-derived-lipid transporter; Provisional
Pssm-ID: 178642 [Multi-domain]
Cd Length: 370
Bit Score: 39.38
E-value: 8.10e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907165931 276 QQK E QVSLGEASST AE D A VQYLHQW R SVMAEHT A AL E E LQ ER L ---- D QAA L DDLRV LT VSLS E k A T E E LRRL Q S TAM T - 350
Cdd:PLN03094 241 REM E AIGVAKMYAL AE R A ADLMEEA R PLLLKIQ A MA E D LQ PL L sevr D SGL L KEVEK LT RVAA E - A S E D LRRL N S SIL T p 319
....*....
gi 1907165931 351 -- Q ELL KR S 357
Cdd:PLN03094 320 en T ELL RQ S 328
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
