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Conserved domains on  [gi|1907152164|ref|XP_036019216|]
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spermatogenesis-associated protein 1 isoform X6 [Mus musculus]

Protein Classification

SPATA1_C domain-containing protein( domain architecture ID 11239042)

SPATA1_C domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SPATA1_C pfam15743
Spermatogenesis-associated C-terminus; This domain family is found in eukaryotes, and is ...
 276-353 7.75e-31

Spermatogenesis-associated C-terminus; This domain family is found in eukaryotes, and is approximately 150 amino acids in length. There is a single completely conserved residue E that may be functionally important.


:

Pssm-ID: 464839 [Multi-domain]  Cd Length: 150  Bit Score: 114.79  E-value: 7.75e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907152164 276 DSWKKKYLDTKKVTASLEEVLTKLREDLELYYKKLLMQLEAREIKMRPRNLANISDS----------------------- 332
Cdd:pfam15743  40 DIWKKKYFETKKKTAPLEEVLNRLRQELELYYNKLLQQLEARDIKGKPKNLGRSSELkneliiqitteqheidqlkrkve 119

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1907152164 333 ----------KMRKQAVSDLQTLKADLTQKK 353
Cdd:pfam15743 120 dakmklvteiKLRKQAATELRALRAELAQKK 150
 
Name Accession Description Interval E-value
SPATA1_C pfam15743
Spermatogenesis-associated C-terminus; This domain family is found in eukaryotes, and is ...
 276-353 7.75e-31

Spermatogenesis-associated C-terminus; This domain family is found in eukaryotes, and is approximately 150 amino acids in length. There is a single completely conserved residue E that may be functionally important.


Pssm-ID: 464839 [Multi-domain]  Cd Length: 150  Bit Score: 114.79  E-value: 7.75e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907152164 276 DSWKKKYLDTKKVTASLEEVLTKLREDLELYYKKLLMQLEAREIKMRPRNLANISDS----------------------- 332
Cdd:pfam15743  40 DIWKKKYFETKKKTAPLEEVLNRLRQELELYYNKLLQQLEARDIKGKPKNLGRSSELkneliiqitteqheidqlkrkve 119

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1907152164 333 ----------KMRKQAVSDLQTLKADLTQKK 353
Cdd:pfam15743 120 dakmklvteiKLRKQAATELRALRAELAQKK 150
 
Name Accession Description Interval E-value
SPATA1_C pfam15743
Spermatogenesis-associated C-terminus; This domain family is found in eukaryotes, and is ...
 276-353 7.75e-31

Spermatogenesis-associated C-terminus; This domain family is found in eukaryotes, and is approximately 150 amino acids in length. There is a single completely conserved residue E that may be functionally important.


Pssm-ID: 464839 [Multi-domain]  Cd Length: 150  Bit Score: 114.79  E-value: 7.75e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907152164 276 DSWKKKYLDTKKVTASLEEVLTKLREDLELYYKKLLMQLEAREIKMRPRNLANISDS----------------------- 332
Cdd:pfam15743  40 DIWKKKYFETKKKTAPLEEVLNRLRQELELYYNKLLQQLEARDIKGKPKNLGRSSELkneliiqitteqheidqlkrkve 119

                          90       100       110
                  ....*....|....*....|....*....|.
gi 1907152164 333 ----------KMRKQAVSDLQTLKADLTQKK 353
Cdd:pfam15743 120 dakmklvteiKLRKQAATELRALRAELAQKK 150
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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