|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
509-764 |
1.15e-12 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 73.19 E-value: 1.15e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 509 TPKRQSTPKPPRV-----KPAPEPETRPSA--QTTKAPRKTKKPGHHRlrRPKTTRSPEVPKS--KPALEPATVTPEILV 579
Cdd:PTZ00449 542 EPKEGGKPGETKEgevgkKPGPAKEHKPSKipTLSKKPEFPKDPKHPK--DPEEPKKPKRPRSaqRPTRPKSPKLPELLD 619
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 580 PKIVPKPPQKPKATRRPEVPQvKPAHEPVTFGSEAPalaivtttdiepvitrtKASVTTLAPKPPRPRTHRQrtKYKTTQ 659
Cdd:PTZ00449 620 IPKSPKRPESPKSPKRPPPPQ-RPSSPERPEGPKII-----------------KSPKPPKSPKPPFDPKFKE--KFYDDY 679
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 660 SPKIPHSKPASTTKKVRRPRPKPQTTPHPEVPHTilvPATSLEPfiiteapgttLVPKLPQQPDYPHPKPKTTRSPAASP 739
Cdd:PTZ00449 680 LDAAAKSKETKTTVVLDESFESILKETLPETPGT---PFTTPRP----------LPPKLPRDEEFPFEPIGDPDAEQPDD 746
|
250 260
....*....|....*....|....*
gi 1907118297 740 TELVPTPVfEPVTPLKEDPVTTIVP 764
Cdd:PTZ00449 747 IEFFTPPE-EERTFFHETPADTPLP 770
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
456-1085 |
4.27e-12 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 71.89 E-value: 4.27e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 456 DSVPPKTSRTAEQPRATLAPIEALFESRNveifTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSaqt 535
Cdd:PHA03247 2558 AAPPAAPDRSVPPPRPAPRPSEPAVTSRA----RRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPS--- 2630
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 536 tKAPRKTKKPGHHRLRRPKttrsPEVPKSKPAlePATVTPEILVPKIvPKPPQKPKATRRPEVPQVKPAHEPVTFGSEAP 615
Cdd:PHA03247 2631 -PSPAANEPDPHPPPTVPP----PERPRDDPA--PGRVSRPRRARRL-GRAAQASSPPQRPRRRAARPTVGSLTSLADPP 2702
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 616 alaivtttDIEPVITRTKASVTTLAPKPPRPRTHRQRTKyKTTQSPKIPHSKPASTTKKVRRPRPKPQTTPHPEVPHTIL 695
Cdd:PHA03247 2703 --------PPPPTPEPAPHALVSATPLPPGPAAARQASP-ALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPA 2773
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 696 VPATSLEPfIITEAPGTTLVPKLPQQPD----YPHPKPKTTRSPAASPTELVPTPVFEPVTPLKEDPVTTIVPitdLERV 771
Cdd:PHA03247 2774 APAAGPPR-RLTRPAVASLSESRESLPSpwdpADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGP---PPPS 2849
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 772 TDLETPVA----FRTEAPGTTLASKISQRTHRPRPRPRPRPRPRPRPKATLSPQAPETKTVPAVVLEPVTLRPEVQVTTL 847
Cdd:PHA03247 2850 LPLGGSVApggdVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQP 2929
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 848 APQKTQKKHRPSPKPKPVPSPEVTESKPVLPrvrepvtlrtETWVTTKAPKTPKRTRRPRPkpqttptpetpltkpvaat 927
Cdd:PHA03247 2930 QPPPPPPPRPQPPLAPTTDPAGAGEPSGAVP----------QPWLGALVPGRVAVPRFRVP------------------- 2980
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 928 dlePSALSTEVPAtvvlataltpvtlrtkaPKTTTlapnvqRTRRPHPRPKTTASTGVSESKSAPtelqslvlkpvtsPS 1007
Cdd:PHA03247 2981 ---QPAPSREAPA-----------------SSTPP------LTGHSLSRVSSWASSLALHEETDP-------------PP 3021
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907118297 1008 LEIIQSQSVSDDLElvafstespqKTIAPRQTTSMPPKLKTPhsrmpAKEPVPKEPLHTTSKPKMPPSPEvADTTSVP 1085
Cdd:PHA03247 3022 VSLKQTLWPPDDTE----------DSDADSLFDSDSERSDLE-----ALDPLPPEPHDPFAHEPDPATPE-AGARESP 3083
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1390-1481 |
3.30e-10 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 58.28 E-value: 3.30e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1390 NPPTNLTVVTVEgcPSFVILDWEKPLNDT--VTEYEVISRENGSFSGKNKSIQITNQTFSTVENLKPDTSYEFQVKPKNP 1467
Cdd:cd00063 2 SPPTNLRVTDVT--STSVTLSWTPPEDDGgpITGYVVEYREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNG 79
|
90
....*....|....
gi 1907118297 1468 LGEGPASNTVAFST 1481
Cdd:cd00063 80 GGESPPSESVTVTT 93
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1391-1471 |
9.88e-08 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 51.08 E-value: 9.88e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1391 PPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV-ISRENGSFSGKNKSIQITNQTFS-TVENLKPDTSYEFQVKPKNPL 1468
Cdd:smart00060 3 PPSNLRVTDVT--STSVTLSWEPPPDDGITGYIVgYRVEYREEGSEWKEVNVTPSSTSyTLTGLKPGTEYEFRVRAVNGA 80
|
...
gi 1907118297 1469 GEG 1471
Cdd:smart00060 81 GEG 83
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
1391-1474 |
1.26e-06 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 47.79 E-value: 1.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1391 PPTNLTVVTVEgcPSFVILDWEKP--LNDTVTEYEVISRENGSFSGKNkSIQITNQTFS-TVENLKPDTSYEFQVKPKNP 1467
Cdd:pfam00041 2 APSNLTVTDVT--STSLTVSWTPPpdGNGPITGYEVEYRPKNSGEPWN-EITVPGTTTSvTLTGLKPGTEYEVRVQAVNG 78
|
....*..
gi 1907118297 1468 LGEGPAS 1474
Cdd:pfam00041 79 GGEGPPS 85
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
945-1336 |
2.90e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 52.63 E-value: 2.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 945 ATALTPVTLRTKAPKTTTLAPNVQRTRRPHPRPKTTASTGvSESKSAPTELQSLVLKPVTSPSLEIIQSQSVSDDLELVA 1024
Cdd:PHA03247 2596 ARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAA-NEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAA 2674
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1025 FSTESPQK--------TIAPRQTTSMPP-KLKTPHSRMPAKEP-VPKEPLHTTSKPKMPPSPEVADTTSVPKDERLSLKP 1094
Cdd:PHA03247 2675 QASSPPQRprrraarpTVGSLTSLADPPpPPPTPEPAPHALVSaTPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGP 2754
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1095 DPEVTHSETVLPPVTFRVEPPKTTIAPLETR--GIPLIPVISPRPSQEELQTAMEETDQSTQELFTTKIPRTTELAKTTQ 1172
Cdd:PHA03247 2755 ARPARPPTTAGPPAPAPPAAPAAGPPRRLTRpaVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSA 2834
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1173 APhrlhTAPVRPRIPGRPH---------GRPALNKTTTRPDKTKPRGTSHKNGVGTGTKQAPKPPSPGRNASVDSHATRK 1243
Cdd:PHA03247 2835 QP----TAPPPPPGPPPPSlplggsvapGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQ 2910
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1244 PGSVSGTRRPPIPHRHSSTRPvSPERRPLPPNNVTGKPGRAGIVSSSRVTSPPLKATLHPIGTATARPGAEQKEPTAPAS 1323
Cdd:PHA03247 2911 PQAPPPPQPQPQPPPPPQPQP-PPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAP 2989
|
410
....*....|...
gi 1907118297 1324 EEEFGTTTDFSSS 1336
Cdd:PHA03247 2990 ASSTPPLTGHSLS 3002
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
491-754 |
1.02e-04 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 47.07 E-value: 1.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 491 PEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKSKPALEP 570
Cdd:pfam03154 172 PVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTLHPQRLPSPHPPLQP 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 571 ATVT--PEILVPKIVPKPPQKPKATRRPEVPQVKPAHEPVTFGSEAPALaivtttdiepvitrTKASVTTLAPKPPRPRT 648
Cdd:pfam03154 252 MTQPppPSQVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPVPPQPFPL--------------TPQSSQSQVPPGPSPAA 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 649 HRQrtkykTTQSPKIPHSKPASTTKKVRRPRPKPqttphpevphtilvPATSLEPFIitEAPGTTLVPKLPQQPDYPHPK 728
Cdd:pfam03154 318 PGQ-----SQQRIHTPPSQSQLQSQQPPREQPLP--------------PAPLSMPHI--KPPPTTPIPQLPNPQSHKHPP 376
|
250 260
....*....|....*....|....*.
gi 1907118297 729 PKTTRSPAASPTELVPTPVFEPVTPL 754
Cdd:pfam03154 377 HLSGPSPFQMNSNLPPPPALKPLSSL 402
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1375-1486 |
1.23e-04 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 46.92 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1375 PTEEATEGNATSPPqNPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEvISRENGSfSGKNKSIQITNQTFSTVENLKP 1454
Cdd:COG3401 220 PSNEVSVTTPTTPP-SAPTGLTATADT--PGSVTLSWDPVTESDATGYR-VYRSNSG-DGPFTKVATVTTTSYTDTGLTN 294
|
90 100 110
....*....|....*....|....*....|...
gi 1907118297 1455 DTSYEFQVKPKNPLG-EGPASNTVAFSTESADP 1486
Cdd:COG3401 295 GTTYYYRVTAVDAAGnESAPSNVVSVTTDLTPP 327
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
116-195 |
1.94e-04 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 41.63 E-value: 1.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 116 KPLQLVVGTLTPSSVFLSWgflinphhdwTLPSHCPSD-RFYTIRYREKDKEKKWIFQLCPATET--IVENLKPNTVYEF 192
Cdd:pfam00041 2 APSNLTVTDVTSTSLTVSW----------TPPPDGNGPiTGYEVEYRPKNSGEPWNEITVPGTTTsvTLTGLKPGTEYEV 71
|
...
gi 1907118297 193 GVK 195
Cdd:pfam00041 72 RVQ 74
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
114-195 |
2.81e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 41.06 E-value: 2.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 114 PRKPLQLVVGTLTPSSVFLSWgflinphhdwtLPSHCPSDRFYTIRYREKDKEKKWIFQLCPA----TETIVENLKPNTV 189
Cdd:smart00060 1 PSPPSNLRVTDVTSTSVTLSW-----------EPPPDDGITGYIVGYRVEYREEGSEWKEVNVtpssTSYTLTGLKPGTE 69
|
....*.
gi 1907118297 190 YEFGVK 195
Cdd:smart00060 70 YEFRVR 75
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
114-195 |
3.08e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 41.33 E-value: 3.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 114 PRKPLQLVVGTLTPSSVFLSWgfliNPHHDWTLPSHcpsdrFYTIRYREKDKE--KKWIFQLCPATETIVENLKPNTVYE 191
Cdd:cd00063 1 PSPPTNLRVTDVTSTSVTLSW----TPPEDDGGPIT-----GYVVEYREKGSGdwKEVEVTPGSETSYTLTGLKPGTEYE 71
|
....
gi 1907118297 192 FGVK 195
Cdd:cd00063 72 FRVR 75
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
491-691 |
6.33e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 44.37 E-value: 6.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 491 PEVRPTTAAPQ---QTTSIPSTPKRQSTPKPPRVKPAPEPETrPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKSKPA 567
Cdd:NF033839 286 EPGNKKPSAPKpgmQPSPQPEKKEVKPEPETPKPEVKPQLEK-PKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPE 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 568 LEPATVTPEilvPKIVPKPPQ-KPKATRRPEVPQVKPAHEPVTFGSEAPALAIVTTTDIEPVITRTKASVTTLAPKP-PR 645
Cdd:NF033839 365 VKPQPEKPK---PEVKPQPETpKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPkPE 441
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1907118297 646 PRTHRQRTKYKTTQSPKIPHSKPASTTKKvrrprPKPQTTPHPEVP 691
Cdd:NF033839 442 VKPQPEKPKPEVKPQPETPKPEVKPQPEK-----PKPEVKPQPEKP 482
|
|
| Not5 |
COG5665 |
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription]; |
428-758 |
2.37e-03 |
|
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];
Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 42.73 E-value: 2.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 428 ATYDVISSSTTSDETEIEIHTATR-------DPILDSVPPKTSRTAEQPRATLAPIEALFESRNVEIFTSPEVR------ 494
Cdd:COG5665 208 STPQAFNASATSGRSQHIVQAAKRvgvewwgDPSLLATPPATPATEEKSSQQPKSQPTSPSGGTTPPSTNQLTTsntpts 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 495 --------PTTAAPQQTTSIPSTPKRQSTPKPPRV--KPAPEPETRPSAQTTKAPRKTKKPGHhrlrRPKTTRSPEVPKS 564
Cdd:COG5665 288 takaqpqpPTKKQPAKEPPSDTASGNPSAPSVLINsdSPTSEDPATASVPTTEETTAFTTPSS----VPSTPAEKDTPAT 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 565 KPALEPATVTPEILV-PKIVPKPPQKPKATrrpevpqvkpAHEPVTFGS-EAPALAIVTTTDIEPVITRTKASVTTLAPK 642
Cdd:COG5665 364 DLATPVSPTPPETSVdKKVSPDSATSSTKS----------EKEGGTASSpMPPNIAIGAKDDVDATDPSQEAKEYTKNAP 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 643 PPRPRTHRQRTKYKTTQSPKIPHSK-PASTTKKVRRPRPKPQTTPHPEVPHTILVPATSLEPFIITEAPGTTLVPKLPQQ 721
Cdd:COG5665 434 MTPEADSAPESSVRTEASPSAGSDLePENTTLRDPAPNAIPPPEDPSTIGRLSSGDKLANETGPPVIRRDSTPSSTADQS 513
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1907118297 722 --PDYPHPKPKTT---RSPAASPTELVPTPVFEPVTPLKEDP 758
Cdd:COG5665 514 ivGVLAFGLDQRTqaeISVEAASRSNPLLNSQVKSFPLGKRS 555
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
307-575 |
3.00e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.62 E-value: 3.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 307 TLALPAESKTPEVEKLAGQPVTVTPESVSRSTKPTLSSALDTAETALVLSEKTSE-TARSVLIPEFELPLSTLAPkrfpe 385
Cdd:PHA03247 2756 RPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAvLAPAAALPPAASPAGPLPP----- 2830
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 386 fPEAKTAFPLEKPRGSWASSEEP--WVVPGAKtsedsrvvqpqtatydvISSSTTSDETEIEIHTATRDPILDSVPPKTS 463
Cdd:PHA03247 2831 -PTSAQPTAPPPPPGPPPPSLPLggSVAPGGD-----------------VRRRPPSRSPAAKPAAPARPPVRRLARPAVS 2892
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 464 RTAE---QPRATLAPiealfeSRNVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPEtrPSAQTTKAPR 540
Cdd:PHA03247 2893 RSTEsfaLPPDQPER------PPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGE--PSGAVPQPWL 2964
|
250 260 270
....*....|....*....|....*....|....*
gi 1907118297 541 KTKKPGHHRLRRpktTRSPEVPKSKPALEPATVTP 575
Cdd:PHA03247 2965 GALVPGRVAVPR---FRVPQPAPSREAPASSTPPL 2996
|
|
| |
|
Name |
Accession |
Description |
Interval |
E-value |
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
509-764 |
1.15e-12 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 73.19 E-value: 1.15e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 509 TPKRQSTPKPPRV-----KPAPEPETRPSA--QTTKAPRKTKKPGHHRlrRPKTTRSPEVPKS--KPALEPATVTPEILV 579
Cdd:PTZ00449 542 EPKEGGKPGETKEgevgkKPGPAKEHKPSKipTLSKKPEFPKDPKHPK--DPEEPKKPKRPRSaqRPTRPKSPKLPELLD 619
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 580 PKIVPKPPQKPKATRRPEVPQvKPAHEPVTFGSEAPalaivtttdiepvitrtKASVTTLAPKPPRPRTHRQrtKYKTTQ 659
Cdd:PTZ00449 620 IPKSPKRPESPKSPKRPPPPQ-RPSSPERPEGPKII-----------------KSPKPPKSPKPPFDPKFKE--KFYDDY 679
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 660 SPKIPHSKPASTTKKVRRPRPKPQTTPHPEVPHTilvPATSLEPfiiteapgttLVPKLPQQPDYPHPKPKTTRSPAASP 739
Cdd:PTZ00449 680 LDAAAKSKETKTTVVLDESFESILKETLPETPGT---PFTTPRP----------LPPKLPRDEEFPFEPIGDPDAEQPDD 746
|
250 260
....*....|....*....|....*
gi 1907118297 740 TELVPTPVfEPVTPLKEDPVTTIVP 764
Cdd:PTZ00449 747 IEFFTPPE-EERTFFHETPADTPLP 770
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
456-1085 |
4.27e-12 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 71.89 E-value: 4.27e-12
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 456 DSVPPKTSRTAEQPRATLAPIEALFESRNveifTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSaqt 535
Cdd:PHA03247 2558 AAPPAAPDRSVPPPRPAPRPSEPAVTSRA----RRPDAPPQSARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPS--- 2630
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 536 tKAPRKTKKPGHHRLRRPKttrsPEVPKSKPAlePATVTPEILVPKIvPKPPQKPKATRRPEVPQVKPAHEPVTFGSEAP 615
Cdd:PHA03247 2631 -PSPAANEPDPHPPPTVPP----PERPRDDPA--PGRVSRPRRARRL-GRAAQASSPPQRPRRRAARPTVGSLTSLADPP 2702
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 616 alaivtttDIEPVITRTKASVTTLAPKPPRPRTHRQRTKyKTTQSPKIPHSKPASTTKKVRRPRPKPQTTPHPEVPHTIL 695
Cdd:PHA03247 2703 --------PPPPTPEPAPHALVSATPLPPGPAAARQASP-ALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPA 2773
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 696 VPATSLEPfIITEAPGTTLVPKLPQQPD----YPHPKPKTTRSPAASPTELVPTPVFEPVTPLKEDPVTTIVPitdLERV 771
Cdd:PHA03247 2774 APAAGPPR-RLTRPAVASLSESRESLPSpwdpADPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGP---PPPS 2849
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 772 TDLETPVA----FRTEAPGTTLASKISQRTHRPRPRPRPRPRPRPRPKATLSPQAPETKTVPAVVLEPVTLRPEVQVTTL 847
Cdd:PHA03247 2850 LPLGGSVApggdVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQP 2929
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 848 APQKTQKKHRPSPKPKPVPSPEVTESKPVLPrvrepvtlrtETWVTTKAPKTPKRTRRPRPkpqttptpetpltkpvaat 927
Cdd:PHA03247 2930 QPPPPPPPRPQPPLAPTTDPAGAGEPSGAVP----------QPWLGALVPGRVAVPRFRVP------------------- 2980
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 928 dlePSALSTEVPAtvvlataltpvtlrtkaPKTTTlapnvqRTRRPHPRPKTTASTGVSESKSAPtelqslvlkpvtsPS 1007
Cdd:PHA03247 2981 ---QPAPSREAPA-----------------SSTPP------LTGHSLSRVSSWASSLALHEETDP-------------PP 3021
|
570 580 590 600 610 620 630
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907118297 1008 LEIIQSQSVSDDLElvafstespqKTIAPRQTTSMPPKLKTPhsrmpAKEPVPKEPLHTTSKPKMPPSPEvADTTSVP 1085
Cdd:PHA03247 3022 VSLKQTLWPPDDTE----------DSDADSLFDSDSERSDLE-----ALDPLPPEPHDPFAHEPDPATPE-AGARESP 3083
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
398-764 |
1.06e-11 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 70.35 E-value: 1.06e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 398 PRGSWASSEEPWVVPGAKTSEDSRVVQPQTAtydvissSTTSDETEIEIHTATRDPILDSVPPKTSRtaeqPRATLAPIE 477
Cdd:PHA03247 2604 DRGDPRGPAPPSPLPPDTHAPDPPPPSPSPA-------ANEPDPHPPPTVPPPERPRDDPAPGRVSR----PRRARRLGR 2672
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 478 ALFESRNVEIFTSPEVRPTTaAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQTTKAPRKTKKP------------ 545
Cdd:PHA03247 2673 AAQASSPPQRPRRRAARPTV-GSLTSLADPPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPappavpagpatp 2751
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 546 -GHHRLRRPKTTRSPevPKSKPALEPATVTPEILvpkivPKPPQKPKATRRPEVPQvKPAHEPVTFGSEAPALAIVTTTD 624
Cdd:PHA03247 2752 gGPARPARPPTTAGP--PAPAPPAAPAAGPPRRL-----TRPAVASLSESRESLPS-PWDPADPPAAVLAPAAALPPAAS 2823
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 625 IEPVITRTKASVTTLAPKPPRPRTHRQ------------RTKYKTTQSPKIPHSKPASTTKKVRRPRPKPQTTP------ 686
Cdd:PHA03247 2824 PAGPLPPPTSAQPTAPPPPPGPPPPSLplggsvapggdvRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESfalppd 2903
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907118297 687 HPEVPHTILVPATSLEPFIITEAPGTTLVPKLPQQPDYPhPKPKTTRSPAASPTELVPTPVFEPVTPLKEDPVTTIVP 764
Cdd:PHA03247 2904 QPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPP-LAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVP 2980
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
1390-1481 |
3.30e-10 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 58.28 E-value: 3.30e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1390 NPPTNLTVVTVEgcPSFVILDWEKPLNDT--VTEYEVISRENGSFSGKNKSIQITNQTFSTVENLKPDTSYEFQVKPKNP 1467
Cdd:cd00063 2 SPPTNLRVTDVT--STSVTLSWTPPEDDGgpITGYVVEYREKGSGDWKEVEVTPGSETSYTLTGLKPGTEYEFRVRAVNG 79
|
90
....*....|....
gi 1907118297 1468 LGEGPASNTVAFST 1481
Cdd:cd00063 80 GGESPPSESVTVTT 93
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
545-1195 |
6.93e-09 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 61.11 E-value: 6.93e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 545 PGHHRLRRPKTTRSPEVPKSKPalEPATVTPEilvPKIVPKPPQKPKATRRPEVPQVKPAHEPV-------------TFG 611
Cdd:PHA03247 2475 PGAPVYRRPAEARFPFAAGAAP--DPGGGGPP---DPDAPPAPSRLAPAILPDEPVGEPVHPRMltwirgleelasdDAG 2549
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 612 SEAPALAivttTDIEPVITRTKASVTTLAPKPPRP----RTHRQRTKYKTTqSPKIPHSKPASttkkvrrPRPKPQTTPH 687
Cdd:PHA03247 2550 DPPPPLP----PAAPPAAPDRSVPPPRPAPRPSEPavtsRARRPDAPPQSA-RPRAPVDDRGD-------PRGPAPPSPL 2617
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 688 PEVPHTILVPATSLEPFIITEAPGTTLVPKLPQQPDYPHPKPKTTRSPAASPTELVPTPVFEPVTPLKEDPVTTIVPITD 767
Cdd:PHA03247 2618 PPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTS 2697
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 768 LERvtdletpvafrTEAPGTTLASKISQRTHRPRPRPRPRPRPRPRPKATLSPQAPETKTVPAVVLEPVtlRPEVQVTTL 847
Cdd:PHA03247 2698 LAD-----------PPPPPPTPEPAPHALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPA--RPARPPTTA 2764
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 848 APqktqkkhrpspkpkpvpspevteSKPVLPRVREPVTLRTETwVTTKAPKTPKRTRRPRPKPQTTPTPETPLTKPVAAT 927
Cdd:PHA03247 2765 GP-----------------------PAPAPPAAPAAGPPRRLT-RPAVASLSESRESLPSPWDPADPPAAVLAPAAALPP 2820
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 928 DLEPSALSTEVPATVVLATALTPVTLRTKAPKTTTLAPNVQRTRRPHPRPKTTASTgvsesksAPTElqslvlkpvtsPS 1007
Cdd:PHA03247 2821 AASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPGGDVRRRPPSRSPAAKPA-------APAR-----------PP 2882
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1008 LEIIQSQSVSDDLELVAFSTESPQKtiaPRQTTSMPPKLKTPhsrmpaKEPVPKEPLHTTSKPKMPPSPEVADTTSVPKD 1087
Cdd:PHA03247 2883 VRRLARPAVSRSTESFALPPDQPER---PPQPQAPPPPQPQP------QPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAG 2953
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1088 ERLSLKPDPEVTHSETVLPPVT-FRVEPPKTTIAPLETRGIPLIPVISPRPSQEELQTAM-EETDQSTQELFTT-KIPRT 1164
Cdd:PHA03247 2954 EPSGAVPQPWLGALVPGRVAVPrFRVPQPAPSREAPASSTPPLTGHSLSRVSSWASSLALhEETDPPPVSLKQTlWPPDD 3033
|
650 660 670
....*....|....*....|....*....|....*
gi 1907118297 1165 TELAKTTQA----PHRLHTAPVRPrIPGRPHGRPA 1195
Cdd:PHA03247 3034 TEDSDADSLfdsdSERSDLEALDP-LPPEPHDPFA 3067
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
494-832 |
3.30e-08 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 58.55 E-value: 3.30e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 494 RPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEpetrpSAQTTKAPRKTKKPGhhRLRRPKTTRSPEVPKSKPALEPATV 573
Cdd:PTZ00449 560 KPGPAKEHKPSKIPTLSKKPEFPKDPKHPKDPE-----EPKKPKRPRSAQRPT--RPKSPKLPELLDIPKSPKRPESPKS 632
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 574 tpeilvPKiVPKPPQKPKATRRPEVPQV----KPAHEP-VTFG-----------SEAPALAIVTTTDIEPVITRTKASVT 637
Cdd:PTZ00449 633 ------PK-RPPPPQRPSSPERPEGPKIikspKPPKSPkPPFDpkfkekfyddyLDAAAKSKETKTTVVLDESFESILKE 705
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 638 TLAPKPPRPRTHRQRTKYKTTQSPKIPHSKPASTTKkvrrPRPKPQTTPHPEVPHTILV---PATSLEPFIITEAPGTTL 714
Cdd:PTZ00449 706 TLPETPGTPFTTPRPLPPKLPRDEEFPFEPIGDPDA----EQPDDIEFFTPPEEERTFFhetPADTPLPDILAEEFKEED 781
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 715 VPKLPQQPDYPHPKPKttrspaaSPTELVPTPVFE-PVTPLK----------------------EDPVTTIVPITDLERV 771
Cdd:PTZ00449 782 IHAETGEPDEAMKRPD-------SPSEHEDKPPGDhPSLPKKrhrldglalsttdlesdagriaKDASGKIVKLKRSKSF 854
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907118297 772 TDLET--------PVAFR-------TEAPGT-TLASKISQRTHRPRPRPRPRPRPRPRPKATLSPQAPETKTVPAVV 832
Cdd:PTZ00449 855 DDLTTveeaeemgAEARKivvdddgTEADDEdTHPPEEKHKSEVRRRRPPKKPSKPKKPSKPKKPKKPDSAFIPSII 931
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
1391-1471 |
9.88e-08 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 51.08 E-value: 9.88e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1391 PPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV-ISRENGSFSGKNKSIQITNQTFS-TVENLKPDTSYEFQVKPKNPL 1468
Cdd:smart00060 3 PPSNLRVTDVT--STSVTLSWEPPPDDGITGYIVgYRVEYREEGSEWKEVNVTPSSTSyTLTGLKPGTEYEFRVRAVNGA 80
|
...
gi 1907118297 1469 GEG 1471
Cdd:smart00060 81 GEG 83
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
507-1109 |
8.00e-07 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 54.17 E-value: 8.00e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 507 PSTPKRQSTPKPPRVKPAPEPETRPS--AQTTKAPRKTKKPghhrlrRPKTTRSPEVPKSKPALEPAtvtpeilvpkivP 584
Cdd:PHA03247 2553 PPLPPAAPPAAPDRSVPPPRPAPRPSepAVTSRARRPDAPP------QSARPRAPVDDRGDPRGPAP------------P 2614
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 585 KPPqkPKATRRPEVPQVKPAHEPVTFGSEAPALAIVTTTDIEpvitrtkasvttlAPKPPRPRTHRQRTKykttqspkip 664
Cdd:PHA03247 2615 SPL--PPDTHAPDPPPPSPSPAANEPDPHPPPTVPPPERPRD-------------DPAPGRVSRPRRARR---------- 2669
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 665 HSKPASTTKKVRRPRPkpqttphPEVPHTILVPATSLEPfiiteapgttlvpklPQQPDYPHPKPKTTRSpaASPTELVP 744
Cdd:PHA03247 2670 LGRAAQASSPPQRPRR-------RAARPTVGSLTSLADP---------------PPPPPTPEPAPHALVS--ATPLPPGP 2725
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 745 TPVFEPVTPLKEDPVTTIVPITDLERVTDLETPVAFRTEAPGTTLASKISQRTHRPRPRPRPRPRPRPRPKATLSPQAPE 824
Cdd:PHA03247 2726 AAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPA 2805
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 825 TKTVPAVVLEPVTLRPEVQVTTLAPQKTQKKHRPSPKPKPVPSPEVTESKpVLPrvREPVTLRTETWVTTKAPKTPKRTR 904
Cdd:PHA03247 2806 DPPAAVLAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGS-VAP--GGDVRRRPPSRSPAAKPAAPARPP 2882
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 905 RPRPKPQTTPTPEtpltkpvaatdlEPSALSTEVPATVVLATALTPVTLRTKAPKTTTLAPNVQRTRRPHPRPKTTAST- 983
Cdd:PHA03247 2883 VRRLARPAVSRST------------ESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPa 2950
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 984 GVSESKSAPTELQSLVLKPVTSPSLEIIQSQSvSDDLELVAFSTESPQKTIAPR------------QTTSMPPKLK---- 1047
Cdd:PHA03247 2951 GAGEPSGAVPQPWLGALVPGRVAVPRFRVPQP-APSREAPASSTPPLTGHSLSRvsswasslalheETDPPPVSLKqtlw 3029
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907118297 1048 ----TPHSRMPAKEPVPKEPLHTTSKPKMPPSPEvaDTTSVPKDERLSLKPDPEVTHSETVLPPVT 1109
Cdd:PHA03247 3030 ppddTEDSDADSLFDSDSERSDLEALDPLPPEPH--DPFAHEPDPATPEAGARESPSSQFGPPPLS 3093
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
1391-1474 |
1.26e-06 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 47.79 E-value: 1.26e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1391 PPTNLTVVTVEgcPSFVILDWEKP--LNDTVTEYEVISRENGSFSGKNkSIQITNQTFS-TVENLKPDTSYEFQVKPKNP 1467
Cdd:pfam00041 2 APSNLTVTDVT--STSLTVSWTPPpdGNGPITGYEVEYRPKNSGEPWN-EITVPGTTTSvTLTGLKPGTEYEVRVQAVNG 78
|
....*..
gi 1907118297 1468 LGEGPAS 1474
Cdd:pfam00041 79 GGEGPPS 85
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
945-1336 |
2.90e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 52.63 E-value: 2.90e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 945 ATALTPVTLRTKAPKTTTLAPNVQRTRRPHPRPKTTASTGvSESKSAPTELQSLVLKPVTSPSLEIIQSQSVSDDLELVA 1024
Cdd:PHA03247 2596 ARPRAPVDDRGDPRGPAPPSPLPPDTHAPDPPPPSPSPAA-NEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAA 2674
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1025 FSTESPQK--------TIAPRQTTSMPP-KLKTPHSRMPAKEP-VPKEPLHTTSKPKMPPSPEVADTTSVPKDERLSLKP 1094
Cdd:PHA03247 2675 QASSPPQRprrraarpTVGSLTSLADPPpPPPTPEPAPHALVSaTPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGP 2754
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1095 DPEVTHSETVLPPVTFRVEPPKTTIAPLETR--GIPLIPVISPRPSQEELQTAMEETDQSTQELFTTKIPRTTELAKTTQ 1172
Cdd:PHA03247 2755 ARPARPPTTAGPPAPAPPAAPAAGPPRRLTRpaVASLSESRESLPSPWDPADPPAAVLAPAAALPPAASPAGPLPPPTSA 2834
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1173 APhrlhTAPVRPRIPGRPH---------GRPALNKTTTRPDKTKPRGTSHKNGVGTGTKQAPKPPSPGRNASVDSHATRK 1243
Cdd:PHA03247 2835 QP----TAPPPPPGPPPPSlplggsvapGGDVRRRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESFALPPDQPERPPQ 2910
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1244 PGSVSGTRRPPIPHRHSSTRPvSPERRPLPPNNVTGKPGRAGIVSSSRVTSPPLKATLHPIGTATARPGAEQKEPTAPAS 1323
Cdd:PHA03247 2911 PQAPPPPQPQPQPPPPPQPQP-PPPPPPRPQPPLAPTTDPAGAGEPSGAVPQPWLGALVPGRVAVPRFRVPQPAPSREAP 2989
|
410
....*....|...
gi 1907118297 1324 EEEFGTTTDFSSS 1336
Cdd:PHA03247 2990 ASSTPPLTGHSLS 3002
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
969-1412 |
5.49e-06 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 51.48 E-value: 5.49e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 969 RTRRPHPRPK-TTASTGVSESKSAPTELQSLVLKPVTS-----PSLEIIQSQSVSDDLELVAFSTESPQKTIAPRQTTsm 1042
Cdd:PHA03247 2585 RARRPDAPPQsARPRAPVDDRGDPRGPAPPSPLPPDTHapdppPPSPSPAANEPDPHPPPTVPPPERPRDDPAPGRVS-- 2662
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1043 PPKLKTPHSRMPAKEPVPKEPLHTTSKPKMPPSPEVADttsvPKDERLSLKPDPEVTHSETVLPPVTF--RVEPPKTTIA 1120
Cdd:PHA03247 2663 RPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLAD----PPPPPPTPEPAPHALVSATPLPPGPAaaRQASPALPAA 2738
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1121 PLeTRGIPLIPVI--SPRPSQEELQTAMEETDQSTQELFTTKIPRTTELAKTTQAPHRlhTAPVRPRIPGrPHGRPALNK 1198
Cdd:PHA03247 2739 PA-PPAVPAGPATpgGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESR--ESLPSPWDPA-DPPAAVLAP 2814
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1199 TTTRPDKTKPRGTSHKNGvgTGTKQAPKPPSPGRNASVDSHATRKPGSvSGTRRPPiphrhSSTRPVSPERRPLPPNNVT 1278
Cdd:PHA03247 2815 AAALPPAASPAGPLPPPT--SAQPTAPPPPPGPPPPSLPLGGSVAPGG-DVRRRPP-----SRSPAAKPAAPARPPVRRL 2886
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1279 GKPGRAGIVSSSRVTSPPLKATLHPIGTATARPGAEQKEPTAPASEEEFGTTTDFSSSPTKETDPLGKPRFIGPHvryiP 1358
Cdd:PHA03247 2887 ARPAVSRSTESFALPPDQPERPPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGEPSGAVPQ----P 2962
|
410 420 430 440 450
....*....|....*....|....*....|....*....|....*....|....
gi 1907118297 1359 KPENKPCSITDSVRRFPTEEATEGNATSPPQNPPTNLTVVTVEGCPSFVILDWE 1412
Cdd:PHA03247 2963 WLGALVPGRVAVPRFRVPQPAPSREAPASSTPPLTGHSLSRVSSWASSLALHEE 3016
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
517-749 |
1.03e-05 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 50.44 E-value: 1.03e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 517 KPPRVKPAPEPETRPSAQT---TKAPRKTKKPGHHRLRRPKTTRSPEVPkskpaLEPATVTPEILVPKIVPKPPQKPKAT 593
Cdd:PHA03377 414 RKPRTLPWPTPKTHPVKRTlvkTSGRSDEAEQAQSTPERPGPSDQPSVP-----VEPAHLTPVEHTTVILHQPPQSPPTV 488
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 594 rrpevpQVKPAHEPVTFGSEApalAIVTTTDIEPVITRTKASVTTLAPKPPRPRTHRQRTKYKTTQSPKIPHSKPASTTK 673
Cdd:PHA03377 489 ------AIKPAPPPSRRRRGA---CVVYDDDIIEVIDVETTEEEESVTQPAKPHRKVQDGFQRSGRRQKRATPPKVSPSD 559
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907118297 674 KvRRPRPKPQTTPHPEVPHTILVPATSLEPFIITEAPGTTLVPKLPQQPdyPHPKPKTTRSPAASPTELVPTPVFE 749
Cdd:PHA03377 560 R-GPPKASPPVMAPPSTGPRVMATPSTGPRDMAPPSTGPRQQAKCKDGP--PASGPHEKQPPSSAPRDMAPSVVRM 632
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1173-1393 |
3.79e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 48.78 E-value: 3.79e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1173 APHRLHTAPVRPRIPGRPHGRP---ALNKTTTRPDKTKPRGTSHKNGVGTGTKQAPKPPSPgrnASVDSHATRKPGSVSG 1249
Cdd:PHA03247 2556 PPAAPPAAPDRSVPPPRPAPRPsepAVTSRARRPDAPPQSARPRAPVDDRGDPRGPAPPSP---LPPDTHAPDPPPPSPS 2632
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1250 TRRPPIPHRHSSTRPVSPERRPLPPNNVTGKPGRAGIVSSSRVTSPPLKATLHPIGTATARPGAEQKEPTAPASEEEFGT 1329
Cdd:PHA03247 2633 PAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRRARRLGRAAQASSPPQRPRRRAARPTVGSLTSLADPPPPPPTPEPAP 2712
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907118297 1330 TTDFSSSPTKETDPLGKPRFIGPHVRYIPKPENKPCSITDSVRRFPTEEATEG-NATSPPQNPPT 1393
Cdd:PHA03247 2713 HALVSATPLPPGPAAARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGpPAPAPPAAPAA 2777
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
1042-1392 |
9.17e-05 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 47.63 E-value: 9.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1042 MPPKLK--TPHSRMPAKEPVPKEP-LHTTSKPKMPPSPEVADTTSVPKDERlslkPDPEVTHSETVLPPVTFRVEPPKTT 1118
Cdd:PHA03247 2555 LPPAAPpaAPDRSVPPPRPAPRPSePAVTSRARRPDAPPQSARPRAPVDDR----GDPRGPAPPSPLPPDTHAPDPPPPS 2630
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1119 IAPLETRGIPLIPVISPRPSQEELQTAMEETDQSTQelfTTKIPRTTELAKTTQAPHRLHTAP--------VRPRIPGR- 1189
Cdd:PHA03247 2631 PSPAANEPDPHPPPTVPPPERPRDDPAPGRVSRPRR---ARRLGRAAQASSPPQRPRRRAARPtvgsltslADPPPPPPt 2707
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1190 PHGRP---------------ALNKTTTRPDKTKPRGTSHKNGVGTGTKQAPKPPSPGRNASVDSHATRKPGSVSGTRRPP 1254
Cdd:PHA03247 2708 PEPAPhalvsatplppgpaaARQASPALPAAPAPPAVPAGPATPGGPARPARPPTTAGPPAPAPPAAPAAGPPRRLTRPA 2787
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1255 IPHRHSSTRPVSPERRPLPPNNVTgkPGRAGIVSSSRVTSPPLKATLHPIGTATARPGAEQKEPTAPASEEEFGttTDFS 1334
Cdd:PHA03247 2788 VASLSESRESLPSPWDPADPPAAV--LAPAAALPPAASPAGPLPPPTSAQPTAPPPPPGPPPPSLPLGGSVAPG--GDVR 2863
|
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907118297 1335 SSPTKETDPLGKPRFIGPHVRYIPKPENKPCSIT-----DSVRRFPTEEATEGNATSPPQNPP 1392
Cdd:PHA03247 2864 RRPPSRSPAAKPAAPARPPVRRLARPAVSRSTESfalppDQPERPPQPQAPPPPQPQPQPPPP 2926
|
|
| Atrophin-1 |
pfam03154 |
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian ... |
491-754 |
1.02e-04 |
|
Atrophin-1 family; Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteriztic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity.
Pssm-ID: 460830 [Multi-domain] Cd Length: 991 Bit Score: 47.07 E-value: 1.02e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 491 PEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKSKPALEP 570
Cdd:pfam03154 172 PVLQAQSGAASPPSPPPPGTTQAATAGPTPSAPSVPPQGSPATSQPPNQTQSTAAPHTLIQQTPTLHPQRLPSPHPPLQP 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 571 ATVT--PEILVPKIVPKPPQKPKATRRPEVPQVKPAHEPVTFGSEAPALaivtttdiepvitrTKASVTTLAPKPPRPRT 648
Cdd:pfam03154 252 MTQPppPSQVSPQPLPQPSLHGQMPPMPHSLQTGPSHMQHPVPPQPFPL--------------TPQSSQSQVPPGPSPAA 317
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 649 HRQrtkykTTQSPKIPHSKPASTTKKVRRPRPKPqttphpevphtilvPATSLEPFIitEAPGTTLVPKLPQQPDYPHPK 728
Cdd:pfam03154 318 PGQ-----SQQRIHTPPSQSQLQSQQPPREQPLP--------------PAPLSMPHI--KPPPTTPIPQLPNPQSHKHPP 376
|
250 260
....*....|....*....|....*.
gi 1907118297 729 PKTTRSPAASPTELVPTPVFEPVTPL 754
Cdd:pfam03154 377 HLSGPSPFQMNSNLPPPPALKPLSSL 402
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1375-1486 |
1.23e-04 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 46.92 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1375 PTEEATEGNATSPPqNPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEvISRENGSfSGKNKSIQITNQTFSTVENLKP 1454
Cdd:COG3401 220 PSNEVSVTTPTTPP-SAPTGLTATADT--PGSVTLSWDPVTESDATGYR-VYRSNSG-DGPFTKVATVTTTSYTDTGLTN 294
|
90 100 110
....*....|....*....|....*....|...
gi 1907118297 1455 DTSYEFQVKPKNPLG-EGPASNTVAFSTESADP 1486
Cdd:COG3401 295 GTTYYYRVTAVDAAGnESAPSNVVSVTTDLTPP 327
|
|
| FN3 |
COG3401 |
Fibronectin type 3 domain [General function prediction only]; |
1375-1529 |
1.70e-04 |
|
Fibronectin type 3 domain [General function prediction only];
Pssm-ID: 442628 [Multi-domain] Cd Length: 603 Bit Score: 46.15 E-value: 1.70e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1375 PTEEATEGNATSPPQnPPTNLTVVTVEgcPSFVILDWEKPLNDTVTEYEV--ISRENGSFSGKNKSIqitNQTFSTVENL 1452
Cdd:COG3401 314 PSNVVSVTTDLTPPA-APSGLTATAVG--SSSITLSWTASSDADVTGYNVyrSTSGGGTYTKIAETV---TTTSYTDTGL 387
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907118297 1453 KPDTSYEFQVKPKNPLG-EGPASNTVAFSTESADPRVSEPISAGRDAIWTERPFNSDSYSECKGKQYVKRTWYKKFVG 1529
Cdd:COG3401 388 TPGTTYYYKVTAVDAAGnESAPSEEVSATTASAASGESLTASVDAVPLTDVAGATAAASAASNPGVSAAVLADGGDTG 465
|
|
| fn3 |
pfam00041 |
Fibronectin type III domain; |
116-195 |
1.94e-04 |
|
Fibronectin type III domain;
Pssm-ID: 394996 [Multi-domain] Cd Length: 85 Bit Score: 41.63 E-value: 1.94e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 116 KPLQLVVGTLTPSSVFLSWgflinphhdwTLPSHCPSD-RFYTIRYREKDKEKKWIFQLCPATET--IVENLKPNTVYEF 192
Cdd:pfam00041 2 APSNLTVTDVTSTSLTVSW----------TPPPDGNGPiTGYEVEYRPKNSGEPWNEITVPGTTTsvTLTGLKPGTEYEV 71
|
...
gi 1907118297 193 GVK 195
Cdd:pfam00041 72 RVQ 74
|
|
| FN3 |
smart00060 |
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, ... |
114-195 |
2.81e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeat within the plasma protein, fibronectin. The tenth fibronectin type III repeat contains a RGD cell recognition sequence in a flexible loop between 2 strands. Type III modules are present in both extracellular and intracellular proteins.
Pssm-ID: 214495 [Multi-domain] Cd Length: 83 Bit Score: 41.06 E-value: 2.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 114 PRKPLQLVVGTLTPSSVFLSWgflinphhdwtLPSHCPSDRFYTIRYREKDKEKKWIFQLCPA----TETIVENLKPNTV 189
Cdd:smart00060 1 PSPPSNLRVTDVTSTSVTLSW-----------EPPPDDGITGYIVGYRVEYREEGSEWKEVNVtpssTSYTLTGLKPGTE 69
|
....*.
gi 1907118297 190 YEFGVK 195
Cdd:smart00060 70 YEFRVR 75
|
|
| FN3 |
cd00063 |
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein ... |
114-195 |
3.08e-04 |
|
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
Pssm-ID: 238020 [Multi-domain] Cd Length: 93 Bit Score: 41.33 E-value: 3.08e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 114 PRKPLQLVVGTLTPSSVFLSWgfliNPHHDWTLPSHcpsdrFYTIRYREKDKE--KKWIFQLCPATETIVENLKPNTVYE 191
Cdd:cd00063 1 PSPPTNLRVTDVTSTSVTLSW----TPPEDDGGPIT-----GYVVEYREKGSGdwKEVEVTPGSETSYTLTGLKPGTEYE 71
|
....
gi 1907118297 192 FGVK 195
Cdd:cd00063 72 FRVR 75
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
515-626 |
5.05e-04 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 44.80 E-value: 5.05e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 515 TPKPPRVKPAPEPETRPSAQTTKAPRKTKKPGHHRLRRPKttrsPEVPKSKPalePATVTPEILVPKIVPKPPQKPKATR 594
Cdd:PRK14950 361 VPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPK----EPVRETAT---PPPVPPRPVAPPVPHTPESAPKLTR 433
|
90 100 110
....*....|....*....|....*....|..
gi 1907118297 595 RPEVPQVKPAHEPVTFGSEAPALAIVTTTDIE 626
Cdd:PRK14950 434 AAIPVDEKPKYTPPAPPKEEEKALIADGDVLE 465
|
|
| PspC_subgroup_2 |
NF033839 |
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, ... |
491-691 |
6.33e-04 |
|
pneumococcal surface protein PspC, LPXTG-anchored form; The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site. The other form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A.
Pssm-ID: 468202 [Multi-domain] Cd Length: 557 Bit Score: 44.37 E-value: 6.33e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 491 PEVRPTTAAPQ---QTTSIPSTPKRQSTPKPPRVKPAPEPETrPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKSKPA 567
Cdd:NF033839 286 EPGNKKPSAPKpgmQPSPQPEKKEVKPEPETPKPEVKPQLEK-PKPEVKPQPEKPKPEVKPQLETPKPEVKPQPEKPKPE 364
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 568 LEPATVTPEilvPKIVPKPPQ-KPKATRRPEVPQVKPAHEPVTFGSEAPALAIVTTTDIEPVITRTKASVTTLAPKP-PR 645
Cdd:NF033839 365 VKPQPEKPK---PEVKPQPETpKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPKPEVKPQPEKPkPE 441
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1907118297 646 PRTHRQRTKYKTTQSPKIPHSKPASTTKKvrrprPKPQTTPHPEVP 691
Cdd:NF033839 442 VKPQPEKPKPEVKPQPETPKPEVKPQPEK-----PKPEVKPQPEKP 482
|
|
| PRK07003 |
PRK07003 |
DNA polymerase III subunit gamma/tau; |
458-759 |
6.75e-04 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 235906 [Multi-domain] Cd Length: 830 Bit Score: 44.46 E-value: 6.75e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 458 VPPKTSRTAEQPRATLAP---IEALFESRNVEIFTSPEVRPTTAAPQQTTsIPSTPKRQSTPKP-------PRVKPAPEP 527
Cdd:PRK07003 372 VPARVAGAVPAPGARAAAavgASAVPAVTAVTGAAGAALAPKAAAAAAAT-RAEAPPAAPAPPAtadrgddAADGDAPVP 450
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 528 ---ETRPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKSKPALEPATVTPEILVPKIVPKPPQ--------KPKATRRP 596
Cdd:PRK07003 451 akaNARASADSRCDERDAQPPADSGSASAPASDAPPDAAFEPAPRAAAPSAATPAAVPDARAPAaasredapAAAAPPAP 530
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 597 EVPQVKPA--HEPVTFGSEAPALAIVTTTDIEPVITRTK--------ASVTTLAPKPPRPRTHRQrtkyktTQSPKIPHS 666
Cdd:PRK07003 531 EARPPTPAaaAPAARAGGAAAALDVLRNAGMRVSSDRGAraaaaakpAAAPAAAPKPAAPRVAVQ------VPTPRARAA 604
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 667 KPASTTKKVRRPRPKPQTT----PHPEVPHTILVPATSLEPFIiteAPGTTLVPKLPQQPDYPHPKPKTTRSPAAsPTEL 742
Cdd:PRK07003 605 TGDAPPNGAARAEQAAESRgappPWEDIPPDDYVPLSADEGFG---GPDDGFVPVFDSGPDDVRVAPKPADAPAP-PVDT 680
|
330
....*....|....*..
gi 1907118297 743 VPTPvfePVTPLkeDPV 759
Cdd:PRK07003 681 RPLP---PAIPL--DAI 692
|
|
| PHA03377 |
PHA03377 |
EBNA-3C; Provisional |
459-756 |
1.36e-03 |
|
EBNA-3C; Provisional
Pssm-ID: 177614 [Multi-domain] Cd Length: 1000 Bit Score: 43.50 E-value: 1.36e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 459 PPKTSRTAEQPRATLAPIEA------LFESRNVEIFTSP------EVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPE 526
Cdd:PHA03377 607 PPASGPHEKQPPSSAPRDMApsvvrmFLRERLLEQSTGPkpksfwEMRAGRDGSGIQQEPSSRRQPATQSTPPRPSWLPS 686
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 527 PETRPSAQTTKAprktkKPGHHRLRRPKTTRSPEVPKSKPALE-PATVTPEILVPKIVPKPPQKPKATRRPEvPQVKPAH 605
Cdd:PHA03377 687 VFVLPSVDAGRA-----QPSEESHLSSMSPTQPISHEEQPRYEdPDDPLDLSLHPDQAPPPSHQAPYSGHEE-PQAQQAP 760
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 606 EPVTFGSEAPALAIVTTTdiEPVITRTKASVTTLAPKPPRPRTHRQRTKYKTTQSPKIPHSKPASTTKKVRRPRPKPQTT 685
Cdd:PHA03377 761 YPGYWEPRPPQAPYLGYQ--EPQAQGVQVSSYPGYAGPWGLRAQHPRYRHSWAYWSQYPGHGHPQGPWAPRPPHLPPQWD 838
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907118297 686 PHPEVPHTILVPATSLEPFIITEAPGTTLVPKLP-QQPDYPHPKPKTTRSPAASPTELVPTPVFEPVTPLKE 756
Cdd:PHA03377 839 GSAGHGQDQVSQFPHLQSETGPPRLQLSQVPQLPySQTLVSSSAPSWSSPQPRAPIRPIPTRFPPPPMPLQD 910
|
|
| PTZ00449 |
PTZ00449 |
104 kDa microneme/rhoptry antigen; Provisional |
1030-1281 |
1.54e-03 |
|
104 kDa microneme/rhoptry antigen; Provisional
Pssm-ID: 185628 [Multi-domain] Cd Length: 943 Bit Score: 43.52 E-value: 1.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1030 PQKTIAPRQTTSMPPKLKTPhsRMPAKEPVPKEPLhTTSKPKMPPSPEVADTTSVPKDERLSLKPDPEVTHSETVLPPVT 1109
Cdd:PTZ00449 569 PSKIPTLSKKPEFPKDPKHP--KDPEEPKKPKRPR-SAQRPTRPKSPKLPELLDIPKSPKRPESPKSPKRPPPPQRPSSP 645
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1110 FRVEPPKT--TIAPLETRGIPLIPVISPRPSQEELQTAMEETDQST----QELFTTKIPRTTELAKTTQAPHRLHTAPVR 1183
Cdd:PTZ00449 646 ERPEGPKIikSPKPPKSPKPPFDPKFKEKFYDDYLDAAAKSKETKTtvvlDESFESILKETLPETPGTPFTTPRPLPPKL 725
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1184 PRIPGRPHGRPAlnktttRPDKTKPRGTSHKNGVGTGTKQAPKPPSPGRNASVDSHATRKPGSVSGTRRPPIPHRhsstR 1263
Cdd:PTZ00449 726 PRDEEFPFEPIG------DPDAEQPDDIEFFTPPEEERTFFHETPADTPLPDILAEEFKEEDIHAETGEPDEAMK----R 795
|
250
....*....|....*....
gi 1907118297 1264 PVSP-ERRPLPPNNVTGKP 1281
Cdd:PTZ00449 796 PDSPsEHEDKPPGDHPSLP 814
|
|
| PRK07994 |
PRK07994 |
DNA polymerase III subunits gamma and tau; Validated |
490-618 |
1.91e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236138 [Multi-domain] Cd Length: 647 Bit Score: 42.93 E-value: 1.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 490 SPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEV-PKSKPAL 568
Cdd:PRK07994 370 VPPQSAAPAASAQATAAPTAAVAPPQAPAVPPPPASAPQQAPAVPLPETTSQLLAARQQLQRAQGATKAKKSePAAASRA 449
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1907118297 569 EPATVTPEIL-----VPKIVPKPPQKPKATR-RPEVPQVKPAHEPVTFGSEAPALA 618
Cdd:PRK07994 450 RPVNSALERLasvrpAPSALEKAPAKKEAYRwKATNPVEVKKEPVATPKALKKALE 505
|
|
| PRK14950 |
PRK14950 |
DNA polymerase III subunits gamma and tau; Provisional |
480-628 |
2.22e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 237864 [Multi-domain] Cd Length: 585 Bit Score: 42.49 E-value: 2.22e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 480 FESRNVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQTTKAPRKTKKPghhrLRRPKTTRSP 559
Cdd:PRK14950 351 LELAVIEALLVPVPAPQPAKPTAAAPSPVRPTPAPSTRPKAAAAANIPPKEPVRETATPPPVPPRP----VAPPVPHTPE 426
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907118297 560 EVPKSKPALEPATVTPEILVPkivPKPPQKPKATRRPEV--PQVKPAHEPVT--FGSEAPALAIVTTTDIEPV 628
Cdd:PRK14950 427 SAPKLTRAAIPVDEKPKYTPP---APPKEEEKALIADGDvlEQLEAIWKQILrdVPPRSPAVQALLSSGVRPV 496
|
|
| Not5 |
COG5665 |
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription]; |
428-758 |
2.37e-03 |
|
CCR4-NOT transcriptional regulation complex, NOT5 subunit [Transcription];
Pssm-ID: 444384 [Multi-domain] Cd Length: 874 Bit Score: 42.73 E-value: 2.37e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 428 ATYDVISSSTTSDETEIEIHTATR-------DPILDSVPPKTSRTAEQPRATLAPIEALFESRNVEIFTSPEVR------ 494
Cdd:COG5665 208 STPQAFNASATSGRSQHIVQAAKRvgvewwgDPSLLATPPATPATEEKSSQQPKSQPTSPSGGTTPPSTNQLTTsntpts 287
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 495 --------PTTAAPQQTTSIPSTPKRQSTPKPPRV--KPAPEPETRPSAQTTKAPRKTKKPGHhrlrRPKTTRSPEVPKS 564
Cdd:COG5665 288 takaqpqpPTKKQPAKEPPSDTASGNPSAPSVLINsdSPTSEDPATASVPTTEETTAFTTPSS----VPSTPAEKDTPAT 363
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 565 KPALEPATVTPEILV-PKIVPKPPQKPKATrrpevpqvkpAHEPVTFGS-EAPALAIVTTTDIEPVITRTKASVTTLAPK 642
Cdd:COG5665 364 DLATPVSPTPPETSVdKKVSPDSATSSTKS----------EKEGGTASSpMPPNIAIGAKDDVDATDPSQEAKEYTKNAP 433
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 643 PPRPRTHRQRTKYKTTQSPKIPHSK-PASTTKKVRRPRPKPQTTPHPEVPHTILVPATSLEPFIITEAPGTTLVPKLPQQ 721
Cdd:COG5665 434 MTPEADSAPESSVRTEASPSAGSDLePENTTLRDPAPNAIPPPEDPSTIGRLSSGDKLANETGPPVIRRDSTPSSTADQS 513
|
330 340 350 360
....*....|....*....|....*....|....*....|..
gi 1907118297 722 --PDYPHPKPKTT---RSPAASPTELVPTPVFEPVTPLKEDP 758
Cdd:COG5665 514 ivGVLAFGLDQRTqaeISVEAASRSNPLLNSQVKSFPLGKRS 555
|
|
| PHA03247 |
PHA03247 |
large tegument protein UL36; Provisional |
307-575 |
3.00e-03 |
|
large tegument protein UL36; Provisional
Pssm-ID: 223021 [Multi-domain] Cd Length: 3151 Bit Score: 42.62 E-value: 3.00e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 307 TLALPAESKTPEVEKLAGQPVTVTPESVSRSTKPTLSSALDTAETALVLSEKTSE-TARSVLIPEFELPLSTLAPkrfpe 385
Cdd:PHA03247 2756 RPARPPTTAGPPAPAPPAAPAAGPPRRLTRPAVASLSESRESLPSPWDPADPPAAvLAPAAALPPAASPAGPLPP----- 2830
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 386 fPEAKTAFPLEKPRGSWASSEEP--WVVPGAKtsedsrvvqpqtatydvISSSTTSDETEIEIHTATRDPILDSVPPKTS 463
Cdd:PHA03247 2831 -PTSAQPTAPPPPPGPPPPSLPLggSVAPGGD-----------------VRRRPPSRSPAAKPAAPARPPVRRLARPAVS 2892
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 464 RTAE---QPRATLAPiealfeSRNVEIFTSPEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPEtrPSAQTTKAPR 540
Cdd:PHA03247 2893 RSTEsfaLPPDQPER------PPQPQAPPPPQPQPQPPPPPQPQPPPPPPPRPQPPLAPTTDPAGAGE--PSGAVPQPWL 2964
|
250 260 270
....*....|....*....|....*....|....*
gi 1907118297 541 KTKKPGHHRLRRpktTRSPEVPKSKPALEPATVTP 575
Cdd:PHA03247 2965 GALVPGRVAVPR---FRVPQPAPSREAPASSTPPL 2996
|
|
| PRK07764 |
PRK07764 |
DNA polymerase III subunits gamma and tau; Validated |
469-600 |
3.53e-03 |
|
DNA polymerase III subunits gamma and tau; Validated
Pssm-ID: 236090 [Multi-domain] Cd Length: 824 Bit Score: 42.28 E-value: 3.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 469 PRATLAPIEALfESRNVEIFTSPEVRPT----TAAPQQTTSIPSTPKRQSTPKPPRVkPAPEPETRPSAQTTKAPRKTKK 544
Cdd:PRK07764 371 ERGLLARLERL-ERRLGVAGGAGAPAAAapsaAAAAPAAAPAPAAAAPAAAAAPAPA-AAPQPAPAPAPAPAPPSPAGNA 448
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|....*.
gi 1907118297 545 PGHHRLRRPKTTRSPEVPKSKPALEPATVTPEILVPKIVPKPPQKPKATRRPEVPQ 600
Cdd:PRK07764 449 PAGGAPSPPPAAAPSAQPAPAPAAAPEPTAAPAPAPPAAPAPAAAPAAPAAPAAPA 504
|
|
| PRK14954 |
PRK14954 |
DNA polymerase III subunits gamma and tau; Provisional |
515-612 |
4.42e-03 |
|
DNA polymerase III subunits gamma and tau; Provisional
Pssm-ID: 184918 [Multi-domain] Cd Length: 620 Bit Score: 41.85 E-value: 4.42e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 515 TPKPPRVKPAPEPETrPSAQTTKAPRKTKKPGhhrlRRPKTTRSPEvpkSKPAlePATVTPeilVPKIVPKPPqKPKATR 594
Cdd:PRK14954 385 AGSPDVKKKAPEPDL-PQPDRHPGPAKPEAPG----ARPAELPSPA---SAPT--PEQQPP---VARSAPLPP-SPQASA 450
|
90
....*....|....*...
gi 1907118297 595 RPEVPQVKPAhepVTFGS 612
Cdd:PRK14954 451 PRNVASGKPG---VDLGS 465
|
|
| COG3979 |
COG3979 |
Chitodextrinase [Carbohydrate transport and metabolism]; |
1387-1486 |
6.13e-03 |
|
Chitodextrinase [Carbohydrate transport and metabolism];
Pssm-ID: 443178 [Multi-domain] Cd Length: 369 Bit Score: 40.91 E-value: 6.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 1387 PPQNPpTNLTVVTVEgcPSFVILDWEK-PLNDTVTEYEVisrengsFSGKNKSIQITNQTFSTVENLKPDTSYEFQVKPK 1465
Cdd:COG3979 2 APTAP-TGLTASNVT--SSSVSLSWDAsTDNVGVTGYDV-------YRGGDQVATVTGLTAWTVTGLTPGTEYTFTVGAC 71
|
90 100
....*....|....*....|.
gi 1907118297 1466 nplgeGPASNTVAFSTESADP 1486
Cdd:COG3979 72 -----DAAGNVSAASGTSTAM 87
|
|
| PRK12323 |
PRK12323 |
DNA polymerase III subunit gamma/tau; |
491-664 |
7.86e-03 |
|
DNA polymerase III subunit gamma/tau;
Pssm-ID: 237057 [Multi-domain] Cd Length: 700 Bit Score: 41.01 E-value: 7.86e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 491 PEVRPTTAAPQQTTSIPSTPKRQSTPKPPRVKPAPEPETRPSAQTTKAPRKTKKPGHHRLRRPKTTRSPEVPKSKPALEP 570
Cdd:PRK12323 383 AQPAPAAAAPAAAAPAPAAPPAAPAAAPAAAAAARAVAAAPARRSPAPEALAAARQASARGPGGAPAPAPAPAAAPAAAA 462
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 571 ATVTPEIL---VPKIVPKPPQKPKATRRPEVPQVKPAHE-PVTFGSEAPA------LAIVTTTDIEPVITRTKASVTTLA 640
Cdd:PRK12323 463 RPAAAGPRpvaAAAAAAPARAAPAAAPAPADDDPPPWEElPPEFASPAPAqpdaapAGWVAESIPDPATADPDDAFETLA 542
|
170 180
....*....|....*....|....
gi 1907118297 641 PKPPRPRTHRQRTKYKTTQSPKIP 664
Cdd:PRK12323 543 PAPAAAPAPRAAAATEPVVAPRPP 566
|
|
| PRK10263 |
PRK10263 |
DNA translocase FtsK; Provisional |
558-828 |
8.91e-03 |
|
DNA translocase FtsK; Provisional
Pssm-ID: 236669 [Multi-domain] Cd Length: 1355 Bit Score: 40.84 E-value: 8.91e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 558 SPEVPKSKPALE----PATVTPEilvPKIVPKPPQKPKATR--RPEVPQVKPAHEPV--TFGSEAPALAIVTTTDIEPVI 629
Cdd:PRK10263 348 SVDVPPAQPTVAwqpvPGPQTGE---PVIAPAPEGYPQQSQyaQPAVQYNEPLQQPVqpQQPYYAPAAEQPAQQPYYAPA 424
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 630 TRTKASVTTLAPKPPRPRTHRQrtkykTTQSPKIPHSKPASTtKKVRRPRPKPQTTPHPEVPHTILVPATSLEPFIITEA 709
Cdd:PRK10263 425 PEQPAQQPYYAPAPEQPVAGNA-----WQAEEQQSTFAPQST-YQTEQTYQQPAAQEPLYQQPQPVEQQPVVEPEPVVEE 498
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907118297 710 pgttLVPKLPQQPDYPHPKPKTTRS--PAASPTELVPTPVFEPVtplkedPVTTIVPITDLERVTDLETPVAFRTEAPGT 787
Cdd:PRK10263 499 ----TKPARPPLYYFEEVEEKRAREreQLAAWYQPIPEPVKEPE------PIKSSLKAPSVAAVPPVEAAAAVSPLASGV 568
|
250 260 270 280
....*....|....*....|....*....|....*....|....
gi 1907118297 788 ---TLASKISQRTHRPRPRPRPRPRPRPRPKATLSPQAPETKTV 828
Cdd:PRK10263 569 kkaTLATGAAATVAAPVFSLANSGGPRPQVKEGIGPQLPRPKRI 612
|
|
| |
