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Conserved domains on  [gi|1907106004|ref|XP_036014800|]
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polypeptide N-acetylgalactosaminyltransferase 15 isoform X2 [Mus musculus]

Protein Classification

glycosyltransferase family protein( domain architecture ID 27718)

glycosyltransferase family protein may synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Glyco_tranf_GTA_type super family cl11394
Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a ...
194-359 2.09e-76

Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.


The actual alignment was detected with superfamily member cd02510:

Pssm-ID: 472172 [Multi-domain]  Cd Length: 299  Bit Score: 237.87  E-value: 2.09e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 194 SVILCFHDEAWPTLLRTVHSILDTAPRALLQEIILVDDLSQQELLKSALSEYVAR-LEAVKLLRSNRRLGTIGARMLGAT 272
Cdd:cd02510     1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKyLPKVKVLRLKKREGLIRARIAGAR 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 273 RATGDVLVFMDAHCECHPGWLEPLLSRIADDRSRVVSPVIDVIDWKTLQYSASK-LHRGTLDWKLDFRWKPLGEQEQKAL 351
Cdd:cd02510    81 AATGDVLVFLDSHCEVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYRGSSgDARGGFDWSLHFKWLPLPEEERRRE 160

                  ....*...
gi 1907106004 352 pSPISPVR 359
Cdd:cd02510   161 -SPTAPIR 167
 
Name Accession Description Interval E-value
pp-GalNAc-T cd02510
pp-GalNAc-T initiates the formation of mucin-type O-linked glycans; UDP-GalNAc: polypeptide ...
194-359 2.09e-76

pp-GalNAc-T initiates the formation of mucin-type O-linked glycans; UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.


Pssm-ID: 133004 [Multi-domain]  Cd Length: 299  Bit Score: 237.87  E-value: 2.09e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 194 SVILCFHDEAWPTLLRTVHSILDTAPRALLQEIILVDDLSQQELLKSALSEYVAR-LEAVKLLRSNRRLGTIGARMLGAT 272
Cdd:cd02510     1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKyLPKVKVLRLKKREGLIRARIAGAR 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 273 RATGDVLVFMDAHCECHPGWLEPLLSRIADDRSRVVSPVIDVIDWKTLQYSASK-LHRGTLDWKLDFRWKPLGEQEQKAL 351
Cdd:cd02510    81 AATGDVLVFLDSHCEVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYRGSSgDARGGFDWSLHFKWLPLPEEERRRE 160

                  ....*...
gi 1907106004 352 pSPISPVR 359
Cdd:cd02510   161 -SPTAPIR 167
Glycos_transf_2 pfam00535
Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, ...
194-335 6.31e-30

Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.


Pssm-ID: 425738 [Multi-domain]  Cd Length: 166  Bit Score: 112.87  E-value: 6.31e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 194 SVILCFHDEaWPTLLRTVHSILDTAPRALlqEIILVDDLSQQELLKsALSEYVARLEAVKLLRSNRRLGTIGARMLGATR 273
Cdd:pfam00535   1 SVIIPTYNE-EKYLLETLESLLNQTYPNF--EIIVVDDGSTDGTVE-IAEEYAKKDPRVRVIRLPENRGKAGARNAGLRA 76
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907106004 274 ATGDVLVFMDAHCECHPGWLEPLLSRIADDRSRVVSPVIDVIDWKTLQYSASKLHRGTLDWK 335
Cdd:pfam00535  77 ATGDYIAFLDADDEVPPDWLEKLVEALEEDGADVVVGSRYVIFGETGEYRRASRITLSRLPF 138
BcsA COG1215
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1, ...
180-304 2.56e-18

Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility];


Pssm-ID: 440828 [Multi-domain]  Cd Length: 303  Bit Score: 84.41  E-value: 2.56e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 180 LCLQQHPTSGLPTASVILCFHDEAwPTLLRTVHSILD-TAPRALLqEIILVDDLSQQELLKsALSEYVARLEAVKLLRSN 258
Cdd:COG1215    18 LARRRRAPADLPRVSVIIPAYNEE-AVIEETLRSLLAqDYPKEKL-EVIVVDDGSTDETAE-IARELAAEYPRVRVIERP 94
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1907106004 259 RRLGTIGARMLGATRATGDVLVFMDAHCECHPGWLEPLLSRIADDR 304
Cdd:COG1215    95 ENGGKAAALNAGLKAARGDIVVFLDADTVLDPDWLRRLVAAFADPG 140
PTZ00260 PTZ00260
dolichyl-phosphate beta-glucosyltransferase; Provisional
225-284 4.25e-03

dolichyl-phosphate beta-glucosyltransferase; Provisional


Pssm-ID: 240336 [Multi-domain]  Cd Length: 333  Bit Score: 38.59  E-value: 4.25e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907106004 225 EIILVDDLSQQELLKSALS---EYVARLEAVKLLRSNRRLGTIGARMLGATRATGDVLVFMDA 284
Cdd:PTZ00260  109 EIIIVNDGSKDKTLKVAKDfwrQNINPNIDIRLLSLLRNKGKGGAVRIGMLASRGKYILMVDA 171
 
Name Accession Description Interval E-value
pp-GalNAc-T cd02510
pp-GalNAc-T initiates the formation of mucin-type O-linked glycans; UDP-GalNAc: polypeptide ...
194-359 2.09e-76

pp-GalNAc-T initiates the formation of mucin-type O-linked glycans; UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.


Pssm-ID: 133004 [Multi-domain]  Cd Length: 299  Bit Score: 237.87  E-value: 2.09e-76
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 194 SVILCFHDEAWPTLLRTVHSILDTAPRALLQEIILVDDLSQQELLKSALSEYVAR-LEAVKLLRSNRRLGTIGARMLGAT 272
Cdd:cd02510     1 SVIIIFHNEALSTLLRTVHSVINRTPPELLKEIILVDDFSDKPELKLLLEEYYKKyLPKVKVLRLKKREGLIRARIAGAR 80
                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 273 RATGDVLVFMDAHCECHPGWLEPLLSRIADDRSRVVSPVIDVIDWKTLQYSASK-LHRGTLDWKLDFRWKPLGEQEQKAL 351
Cdd:cd02510    81 AATGDVLVFLDSHCEVNVGWLEPLLARIAENRKTVVCPIIDVIDADTFEYRGSSgDARGGFDWSLHFKWLPLPEEERRRE 160

                  ....*...
gi 1907106004 352 pSPISPVR 359
Cdd:cd02510   161 -SPTAPIR 167
Glycos_transf_2 pfam00535
Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, ...
194-335 6.31e-30

Glycosyl transferase family 2; Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.


Pssm-ID: 425738 [Multi-domain]  Cd Length: 166  Bit Score: 112.87  E-value: 6.31e-30
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 194 SVILCFHDEaWPTLLRTVHSILDTAPRALlqEIILVDDLSQQELLKsALSEYVARLEAVKLLRSNRRLGTIGARMLGATR 273
Cdd:pfam00535   1 SVIIPTYNE-EKYLLETLESLLNQTYPNF--EIIVVDDGSTDGTVE-IAEEYAKKDPRVRVIRLPENRGKAGARNAGLRA 76
                          90       100       110       120       130       140
                  ....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907106004 274 ATGDVLVFMDAHCECHPGWLEPLLSRIADDRSRVVSPVIDVIDWKTLQYSASKLHRGTLDWK 335
Cdd:pfam00535  77 ATGDYIAFLDADDEVPPDWLEKLVEALEEDGADVVVGSRYVIFGETGEYRRASRITLSRLPF 138
BcsA COG1215
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1, ...
180-304 2.56e-18

Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase [Cell motility];


Pssm-ID: 440828 [Multi-domain]  Cd Length: 303  Bit Score: 84.41  E-value: 2.56e-18
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 180 LCLQQHPTSGLPTASVILCFHDEAwPTLLRTVHSILD-TAPRALLqEIILVDDLSQQELLKsALSEYVARLEAVKLLRSN 258
Cdd:COG1215    18 LARRRRAPADLPRVSVIIPAYNEE-AVIEETLRSLLAqDYPKEKL-EVIVVDDGSTDETAE-IARELAAEYPRVRVIERP 94
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*.
gi 1907106004 259 RRLGTIGARMLGATRATGDVLVFMDAHCECHPGWLEPLLSRIADDR 304
Cdd:COG1215    95 ENGGKAAALNAGLKAARGDIVVFLDADTVLDPDWLRRLVAAFADPG 140
WcaA COG0463
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]; ...
191-308 1.69e-16

Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis];


Pssm-ID: 440231 [Multi-domain]  Cd Length: 208  Bit Score: 77.43  E-value: 1.69e-16
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 191 PTASVILCFHDEAwPTLLRTVHSILDTAPRALlqEIILVDDLSQ---QELLKsalsEYVARLEAVKLLRSNRRLGTIGAR 267
Cdd:COG0463     2 PLVSVVIPTYNEE-EYLEEALESLLAQTYPDF--EIIVVDDGSTdgtAEILR----ELAAKDPRIRVIRLERNRGKGAAR 74
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|.
gi 1907106004 268 MLGATRATGDVLVFMDAHCECHPGWLEPLLSRIADDRSRVV 308
Cdd:COG0463    75 NAGLAAARGDYIAFLDADDQLDPEKLEELVAALEEGPADLV 115
Glyco_tranf_GTA_type cd00761
Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a ...
195-308 2.09e-15

Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold; Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.


Pssm-ID: 132997 [Multi-domain]  Cd Length: 156  Bit Score: 72.92  E-value: 2.09e-15
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 195 VILCFHDEAwPTLLRTVHSILD-TAPRallQEIILVDDLSQQELLKsALSEYVARLEAVKLLRSNRRLGTIGARMLGATR 273
Cdd:cd00761     1 VIIPAYNEE-PYLERCLESLLAqTYPN---FEVIVVDDGSTDGTLE-ILEEYAKKDPRVIRVINEENQGLAAARNAGLKA 75
                          90       100       110
                  ....*....|....*....|....*....|....*
gi 1907106004 274 ATGDVLVFMDAHCECHPGWLEPLLSRIADDRSRVV 308
Cdd:cd00761    76 ARGEYILFLDADDLLLPDWLERLVAELLADPEADA 110
WcaE COG1216
Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];
191-298 1.64e-14

Glycosyltransferase, GT2 family [Carbohydrate transport and metabolism];


Pssm-ID: 440829 [Multi-domain]  Cd Length: 202  Bit Score: 71.56  E-value: 1.64e-14
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 191 PTASVILCFHDEaWPTLLRTVHSILDTAPRALlqEIILVDDLSQQELLksalsEYVARLEA--VKLLRSNRRLGTIGARM 268
Cdd:COG1216     3 PKVSVVIPTYNR-PELLRRCLESLLAQTYPPF--EVIVVDNGSTDGTA-----ELLAALAFprVRVIRNPENLGFAAARN 74
                          90       100       110
                  ....*....|....*....|....*....|
gi 1907106004 269 LGATRATGDVLVFMDAHCECHPGWLEPLLS 298
Cdd:COG1216    75 LGLRAAGGDYLLFLDDDTVVEPDWLERLLA 104
DPM_DPG-synthase_like cd04179
DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily; DPM1 is the ...
195-308 9.00e-09

DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.


Pssm-ID: 133022 [Multi-domain]  Cd Length: 185  Bit Score: 54.50  E-value: 9.00e-09
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 195 VILCFHDEAwpTLLRTVHSILDTAPRALLQEIILVDDLSQ---QELLKsalsEYVARLEAVKLLRSNRRLGTIGARMLGA 271
Cdd:cd04179     2 VIPAYNEEE--NIPELVERLLAVLEEGYDYEIIVVDDGSTdgtAEIAR----ELAARVPRVRVIRLSRNFGKGAAVRAGF 75
                          90       100       110
                  ....*....|....*....|....*....|....*..
gi 1907106004 272 TRATGDVLVFMDAHCECHPGWLEPLLSRIADDRSRVV 308
Cdd:cd04179    76 KAARGDIVVTMDADLQHPPEDIPKLLEKLLEGGADVV 112
CESA_like_1 cd06439
CESA_like_1 is a member of the cellulose synthase (CESA) superfamily; This is a subfamily of ...
162-309 1.60e-08

CESA_like_1 is a member of the cellulose synthase (CESA) superfamily; This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.


Pssm-ID: 133061 [Multi-domain]  Cd Length: 251  Bit Score: 54.90  E-value: 1.60e-08
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 162 PLSARLPLRRVLPEVRHPlclqqhPTSGLPTASVILCFHDEAwPTLLRTVHSILDTA-PRALLqEIILVDDLSQ---QEL 237
Cdd:cd06439     6 PLLLKLLARLRPKPPSLP------DPAYLPTVTIIIPAYNEE-AVIEAKLENLLALDyPRDRL-EIIVVSDGSTdgtAEI 77
                          90       100       110       120       130       140       150
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907106004 238 LKSALSEyvarleAVKLLRSNRRLGTIGARMLGATRATGDVLVFMDAHCECHPGWLEPLLSRIADDRSRVVS 309
Cdd:cd06439    78 AREYADK------GVKLLRFPERRGKAAALNRALALATGEIVVFTDANALLDPDALRLLVRHFADPSVGAVS 143
GT_2_like_e cd04192
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
195-312 1.02e-06

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133035 [Multi-domain]  Cd Length: 229  Bit Score: 49.21  E-value: 1.02e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 195 VILCFHDEAwPTLLRTVHSILD-TAPRALLqEIILVDDLSQ---QELLKSALSEYVARLeavKLLRSNRRLGTIGARML- 269
Cdd:cd04192     1 VVIAARNEA-ENLPRLLQSLSAlDYPKEKF-EVILVDDHSTdgtVQILEFAAAKPNFQL---KILNNSRVSISGKKNALt 75
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....*
gi 1907106004 270 -GATRATGDVLVFMDAHCECHPGWLEPLLSRIADDRSRVVS-PVI 312
Cdd:cd04192    76 tAIKAAKGDWIVTTDADCVVPSNWLLTFVAFIQKEQIGLVAgPVI 120
Succinoglycan_BP_ExoA cd02525
ExoA is involved in the biosynthesis of succinoglycan; Succinoglycan Biosynthesis Protein ExoA ...
195-315 1.20e-06

ExoA is involved in the biosynthesis of succinoglycan; Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.


Pssm-ID: 133016 [Multi-domain]  Cd Length: 249  Bit Score: 49.15  E-value: 1.20e-06
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 195 VILCFHDEAwpTLLRTVHSILDTAPRALLQEIILVDDLSQ---QELLKsalsEYVARLEAVKLLrSNRRLGTIGARMLGA 271
Cdd:cd02525     5 IIPVRNEEK--YIEELLESLLNQSYPKDLIEIIVVDGGSTdgtREIVQ----EYAAKDPRIRLI-DNPKRIQSAGLNIGI 77
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|....
gi 1907106004 272 TRATGDVLVFMDAHCECHPGWLEPLLSRIADDRSRVVSPVIDVI 315
Cdd:cd02525    78 RNSRGDIIIRVDAHAVYPKDYILELVEALKRTGADNVGGPMETI 121
CESA_like cd06423
CESA_like is the cellulose synthase superfamily; The cellulose synthase (CESA) superfamily ...
195-303 1.50e-05

CESA_like is the cellulose synthase superfamily; The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis protein catalyzes the elongation of beta-1,2 polyglucose chains of Glucan.


Pssm-ID: 133045 [Multi-domain]  Cd Length: 180  Bit Score: 44.91  E-value: 1.50e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 195 VILCFHDEAwPTLLRTVHSILD-TAPRAllqEIILVDDLSQQELLKSALSEYVARLEAVKLLRSNRRLGTIGARMLGATR 273
Cdd:cd06423     1 IIVPAYNEE-AVIERTIESLLAlDYPKL---EVIVVDDGSTDDTLEILEELAALYIRRVLVVRDKENGGKAGALNAGLRH 76
                          90       100       110
                  ....*....|....*....|....*....|
gi 1907106004 274 ATGDVLVFMDAHCECHPGWLEPLLSRIADD 303
Cdd:cd06423    77 AKGDIVVVLDADTILEPDALKRLVVPFFAD 106
DPG_synthase cd04188
DPG_synthase is involved in protein N-linked glycosylation; UDP-glucose:dolichyl-phosphate ...
195-284 1.73e-05

DPG_synthase is involved in protein N-linked glycosylation; UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.


Pssm-ID: 133031 [Multi-domain]  Cd Length: 211  Bit Score: 45.25  E-value: 1.73e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 195 VILCFHDEAwpTLLRTVHSILDTAPRALLQ--EIILVDDLSQQELLKSALsEYVARLEA-VKLLRSNRRLGTIGARMLGA 271
Cdd:cd04188     2 VIPAYNEEK--RLPPTLEEAVEYLEERPSFsyEIIVVDDGSKDGTAEVAR-KLARKNPAlIRVLTLPKNRGKGGAVRAGM 78
                          90
                  ....*....|...
gi 1907106004 272 TRATGDVLVFMDA 284
Cdd:cd04188    79 LAARGDYILFADA 91
Glyco_tranf_2_3 pfam13641
Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include ...
195-308 3.97e-05

Glycosyltransferase like family 2; Members of this family of prokaryotic proteins include putative glucosyltransferase, which are involved in bacterial capsule biosynthesis.


Pssm-ID: 433372 [Multi-domain]  Cd Length: 230  Bit Score: 44.28  E-value: 3.97e-05
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 195 VILCFHDEAwpTLLRTVHSILDTA-PRAllqEIILVDDLSQQELLKSALsEYVARLEAVKL--LRSNRRLGTIGAR--ML 269
Cdd:pfam13641   7 VVPAFNEDS--VLGRVLEAILAQPyPPV---EVVVVVNPSDAETLDVAE-EIAARFPDVRLrvIRNARLLGPTGKSrgLN 80
                          90       100       110       120
                  ....*....|....*....|....*....|....*....|
gi 1907106004 270 GATRA-TGDVLVFMDAHCECHPGWLEPLLSRIADDRSRVV 308
Cdd:pfam13641  81 HGFRAvKSDLVVLHDDDSVLHPGTLKKYVQYFDSPKVGAV 120
GT_2_like_c cd04186
Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse ...
195-303 1.01e-04

Subfamily of Glycosyltransferase Family GT2 of unknown function; GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.


Pssm-ID: 133029 [Multi-domain]  Cd Length: 166  Bit Score: 42.55  E-value: 1.01e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 195 VILCFHDeAWPTLLRTVHSILDTAPRALlqEIILVDDLSQ---QELLKSALSEyvarleaVKLLRSNRRLGTIGARMLGA 271
Cdd:cd04186     1 IIIVNYN-SLEYLKACLDSLLAQTYPDF--EVIVVDNASTdgsVELLRELFPE-------VRLIRNGENLGFGAGNNQGI 70
                          90       100       110
                  ....*....|....*....|....*....|..
gi 1907106004 272 TRATGDVLVFMDAHCECHPGWLEPLLSRIADD 303
Cdd:cd04186    71 REAKGDYVLLLNPDTVVEPGALLELLDAAEQD 102
DPM1_like cd06442
DPM1_like represents putative enzymes similar to eukaryotic DPM1; Proteins similar to ...
225-308 4.05e-04

DPM1_like represents putative enzymes similar to eukaryotic DPM1; Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. This protein family belongs to Glycosyltransferase 2 superfamily.


Pssm-ID: 133062 [Multi-domain]  Cd Length: 224  Bit Score: 41.36  E-value: 4.05e-04
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 225 EIILVDDLSQ---QELLKsalsEYVARLEAVKLLRSNRRLGTIGARMLGATRATGDVLVFMDA---HcecHPGWLEPLLS 298
Cdd:cd06442    29 EIIVVDDNSPdgtAEIVR----ELAKEYPRVRLIVRPGKRGLGSAYIEGFKAARGDVIVVMDAdlsH---PPEYIPELLE 101
                          90
                  ....*....|
gi 1907106004 299 RIADDRSRVV 308
Cdd:cd06442   102 AQLEGGADLV 111
DPM1_like_bac cd04187
Bacterial DPM1_like enzymes are related to eukaryotic DPM1; A family of bacterial enzymes ...
195-284 1.58e-03

Bacterial DPM1_like enzymes are related to eukaryotic DPM1; A family of bacterial enzymes related to eukaryotic DPM1; Although the mechanism of eukaryotic enzyme is well studied, the mechanism of the bacterial enzymes is not well understood. The eukaryotic DPM1 is the catalytic subunit of eukaryotic Dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. The enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. This protein family belongs to Glycosyltransferase 2 superfamily.


Pssm-ID: 133030 [Multi-domain]  Cd Length: 181  Bit Score: 39.00  E-value: 1.58e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 195 VILCFHDEA-WPTLLRTVHSILDTAPRALlqEIILVDDLSQ---QELLKsalsEYVARLEAVKLLRSNRRLGTIGARMLG 270
Cdd:cd04187     2 VVPVYNEEEnLPELYERLKAVLESLGYDY--EIIFVDDGSTdrtLEILR----ELAARDPRVKVIRLSRNFGQQAALLAG 75
                          90
                  ....*....|....
gi 1907106004 271 ATRATGDVLVFMDA 284
Cdd:cd04187    76 LDHARGDAVITMDA 89
PTZ00260 PTZ00260
dolichyl-phosphate beta-glucosyltransferase; Provisional
225-284 4.25e-03

dolichyl-phosphate beta-glucosyltransferase; Provisional


Pssm-ID: 240336 [Multi-domain]  Cd Length: 333  Bit Score: 38.59  E-value: 4.25e-03
                          10        20        30        40        50        60
                  ....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907106004 225 EIILVDDLSQQELLKSALS---EYVARLEAVKLLRSNRRLGTIGARMLGATRATGDVLVFMDA 284
Cdd:PTZ00260  109 EIIIVNDGSKDKTLKVAKDfwrQNINPNIDIRLLSLLRNKGKGGAVRIGMLASRGKYILMVDA 171
PLN02726 PLN02726
dolichyl-phosphate beta-D-mannosyltransferase
184-309 5.05e-03

dolichyl-phosphate beta-D-mannosyltransferase


Pssm-ID: 215385 [Multi-domain]  Cd Length: 243  Bit Score: 38.14  E-value: 5.05e-03
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907106004 184 QHPTSGLPTASVILCFHDEAwPTLLRTVHSILDTAPRALLQEIILVDDLS---QQELLKSALSEYVarlEAVKLLRSN-R 259
Cdd:PLN02726    2 EAPGEGAMKYSIIVPTYNER-LNIALIVYLIFKALQDVKDFEIIVVDDGSpdgTQDVVKQLQKVYG---EDRILLRPRpG 77
                          90       100       110       120       130
                  ....*....|....*....|....*....|....*....|....*....|
gi 1907106004 260 RLGTIGARMLGATRATGDVLVFMDAHCECHPGWLEPLLSRIADDRSRVVS 309
Cdd:PLN02726   78 KLGLGTAYIHGLKHASGDFVVIMDADLSHHPKYLPSFIKKQRETGADIVT 127
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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