|
Name |
Accession |
Description |
Interval |
E-value |
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
482-1215 |
7.11e-17 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 86.65 E-value: 7.11e-17
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 482 EQAA--TQLKVQLQEAERRWEEVQSYI---------RKRTAEHEAAQQDLQSKFVAKENEVQSLHskLTDTLVSKQQLEQ 550
Cdd:TIGR02168 162 EEAAgiSKYKERRKETERKLERTRENLdrledilneLERQLKSLERQAEKAERYKELKAELRELE--LALLVLRLEELRE 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 551 RLMQLMESEQKRASKEESLQIQVQDILEQNEALKAQIQQFHSQIAAQTSAsvlAEELHKVIAEKDKQLKQTEDSLANEQD 630
Cdd:TIGR02168 240 ELEELQEELKEAEEELEELTAELQELEEKLEELRLEVSELEEEIEELQKE---LYALANEISRLEQQKQILRERLANLER 316
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 631 HLASKEEELKDVQNMNFLLKAEVQKLQA----LANEQAATAHEVEKMQKSIHVKEDKIRLLEE----------QLQHEVA 696
Cdd:TIGR02168 317 QLEELEAQLEELESKLDELAEELAELEEkleeLKEELESLEAELEELEAELEELESRLEELEEqletlrskvaQLELQIA 396
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 697 SKMEELKILSEQNKALQSEVQKLQTAVSQQPNKDVVEQMEKCIQEKDEKLRTVEEL---LETGLIQVATREEELSAIRTE 773
Cdd:TIGR02168 397 SLNNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKELQAELEELEEELEELqeeLERLEEALEELREELEEAEQA 476
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 774 NSTLTREVQELKAK----QSDQVSFVSLIEDLKRVIHEKDGqiKSVEELLEVELLKVANK-----------------EKT 832
Cdd:TIGR02168 477 LDAAERELAQLQARldslERLQENLEGFSEGVKALLKNQSG--LSGILGVLSELISVDEGyeaaieaalggrlqavvVEN 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 833 VQALKQEIEVLKEE------------IGNAQLEKAHQLSVTSQVQELQNLLRGKEEQ----------------VNSMKAA 884
Cdd:TIGR02168 555 LNAAKKAIAFLKQNelgrvtflpldsIKGTEIQGNDREILKNIEGFLGVAKDLVKFDpklrkalsyllggvlvVDDLDNA 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 885 LEDRdRDLRGRGTC---------AQVCSTPQFEELESVLKEKDNEIKRIEVKLKDTESDVSKMSELLKEVQEENKFLKCQ 955
Cdd:TIGR02168 635 LELA-KKLRPGYRIvtldgdlvrPGGVITGGSAKTNSSILERRREIEELEEKIEELEEKIAELEKALAELRKELEELEEE 713
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 956 LSH-QKHQQASFPSQEELQTVISEKEKEI---TDLCNELESLKNAVEHQRKKNNERRQHVEAIELESKDLLKRLFPTVSV 1031
Cdd:TIGR02168 714 LEQlRKELEELSRQISALRKDLARLEAEVeqlEERIAQLSKELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQ 793
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1032 PSNLNYS--EWLRGFEKKAKAC-VAGTSDAEAVKVLEHRLKEASEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEES 1108
Cdd:TIGR02168 794 LKEELKAlrEALDELRAELTLLnEEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELES 873
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1109 KWKIKADESQRMIKQMQSSFTASERELERLRQENKDMENLRREREHLEMELEKAEMERSTYVMEVRELKTQLNETHS-KL 1187
Cdd:TIGR02168 874 ELEALLNERASLEEALALLRSELEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVRIDNLQERLSEEYSlTL 953
|
810 820
....*....|....*....|....*...
gi 1907099785 1188 QNEQTERKKVADDLHKAQQSLNSIHSKI 1215
Cdd:TIGR02168 954 EEAEALENKIEDDEEEARRRLKRLENKI 981
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
448-993 |
1.34e-14 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 79.21 E-value: 1.34e-14
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 448 AELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAK 527
Cdd:COG1196 232 LKLRELEAELEELEAELEELEAELEELEAELAELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERR 311
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 528 ENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASKEESLQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEEL 607
Cdd:COG1196 312 RELEERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEA 391
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 608 HKVIAEKDKQLKQTEDSLANEQDHLASKEEELKDVQNMNFLLKAEVQKLQALANEQAATAHEVEKMQKSIHVKEDKIRLL 687
Cdd:COG1196 392 LRAAAELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEE 471
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 688 EEQLQHEVASKMEELKILSEQNKALQSEVQKLQTAVSQQPNKDVVEQMEKCIQEKDEkLRTVEELLETgLIQVATREEEL 767
Cdd:COG1196 472 AALLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLAGAVAV-LIGVEAAYEA-ALEAALAAALQ 549
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 768 SAIRTENSTLTREVQELKAKQSDQVSFVSLIEDLKRVIHEKD---GQIKSVEELLEVELLKVANKEKTVQALKQEIEVLK 844
Cdd:COG1196 550 NIVVEDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAAlarGAIGAAVDLVASDLREADARYYVLGDTLLGRTLVA 629
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 845 EEIGNAQ-LEKAHQLSVTSQVQELQNLLRGKEEQVNSMKAALEDRDRDLRGRGTCAQVCSTPQFEELESVLKEKDNEIKR 923
Cdd:COG1196 630 ARLEAALrRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEEREL 709
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 924 IEVKLKDTESDVSKMSELLKEVQEENKFLKCQLSHQKHQQASFPSQEELQTVISEKEKEITDLCNELESL 993
Cdd:COG1196 710 AEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREIEAL 779
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
409-956 |
1.98e-13 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 75.36 E-value: 1.98e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 409 KFQQVQEQMEAEIAHLKQENGILRDAVSNTTNQLESKQSA--ELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAT 486
Cdd:COG1196 236 ELEAELEELEAELEELEAELEELEAELAELEAELEELRLEleELELELEEAQAEEYELLAELARLEQDIARLEERRRELE 315
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 487 QLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASKE 566
Cdd:COG1196 316 ERLEELEEELAELEEELEELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEELEELAEELLEALRAA 395
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 567 ESLQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQLKQTEDSLANEQDHLASKEEELKDVQNmn 646
Cdd:COG1196 396 AELAAQLEELEEAEEALLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAA-- 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 647 fLLKAEVQKLQALANEQAATAHEVEKMQKSIHVKEDKIRLLEEQLQHEVASkmEELKILSEQNKALQSEVQKLQTAVSQQ 726
Cdd:COG1196 474 -LLEAALAELLEELAEAAARLLLLLEAEADYEGFLEGVKAALLLAGLRGLA--GAVAVLIGVEAAYEAALEAALAAALQN 550
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 727 PNKDVVEQMEKCIQ---------------EKDEKLRTVEELLETGLIQVAT------REEELSAIRTENSTLTREVQELK 785
Cdd:COG1196 551 IVVEDDEVAAAAIEylkaakagratflplDKIRARAALAAALARGAIGAAVdlvasdLREADARYYVLGDTLLGRTLVAA 630
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 786 AKQSDQVSFVSLIEDLKRVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEVLKEEIGNAQLEKAHQLSVTSQVQ 865
Cdd:COG1196 631 RLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELA 710
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 866 ELQNLLRGKEEQVNSMKAALEDRDRDLRGRgtcaQVCSTPQFEELESVLKEKDNEIKRIEVKLKDTESDVSKMS------ 939
Cdd:COG1196 711 EAEEERLEEELEEEALEEQLEAEREELLEE----LLEEEELLEEEALEELPEPPDLEELERELERLEREIEALGpvnlla 786
|
570
....*....|....*...
gi 1907099785 940 -ELLKEVQEENKFLKCQL 956
Cdd:COG1196 787 iEEYEELEERYDFLSEQR 804
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
335-1025 |
4.52e-13 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 74.32 E-value: 4.52e-13
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 335 QLQEKERLLSAMKEDAAASKERCKQLTQEMMTEKERSSvviarmKDRIGTLEKEHNIFQNKMHASYQETQQMQMKFQQVQ 414
Cdd:TIGR02168 221 ELRELELALLVLRLEELREELEELQEELKEAEEELEEL------TAELQELEEKLEELRLEVSELEEEIEELQKELYALA 294
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 415 eqmeAEIAHLKQENGILRDAVSNTTNQLESKqSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAATQLKVQLQE 494
Cdd:TIGR02168 295 ----NEISRLEQQKQILRERLANLERQLEEL-EAQLEELESKLDELAEELAELEEKLEELKEELESLEAELEELEAELEE 369
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 495 AERRWEEVQSYIRKRTAEHEAAQQDLQSKfvakENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASKEesLQIQVQ 574
Cdd:TIGR02168 370 LESRLEELEEQLETLRSKVAQLELQIASL----NNEIERLEARLERLEDRRERLQQEIEELLKKLEEAELKE--LQAELE 443
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 575 DILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQLKQTEDSLANEQDHLASKEEELKDVQNMNFLLKAEVQ 654
Cdd:TIGR02168 444 ELEEELEELQEELERLEEALEELREELEEAEQALDAAERELAQLQARLDSLERLQENLEGFSEGVKALLKNQSGLSGILG 523
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 655 KLQALAN-----EQAATAHEVEKMQKSIHVKEDKIRLLEEQL------------------QHEVASKMEEL--------- 702
Cdd:TIGR02168 524 VLSELISvdegyEAAIEAALGGRLQAVVVENLNAAKKAIAFLkqnelgrvtflpldsikgTEIQGNDREILkniegflgv 603
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 703 -----KILSEQNKALQSE------VQKLQTAVSQQPNKDV---------------------VEQMEKCIQEKDEKLRTVE 750
Cdd:TIGR02168 604 akdlvKFDPKLRKALSYLlggvlvVDDLDNALELAKKLRPgyrivtldgdlvrpggvitggSAKTNSSILERRREIEELE 683
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 751 ELLETGLIQVATREEELSAIRTENSTLTREVQELKAkqsdqvsfvsLIEDLKRVIHEKDGQIKSVEELLEVELLKVANKE 830
Cdd:TIGR02168 684 EKIEELEEKIAELEKALAELRKELEELEEELEQLRK----------ELEELSRQISALRKDLARLEAEVEQLEERIAQLS 753
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 831 KTVQALKQEIEVLKEEIGNAQLEKAHQLSVTSQVQELQNLLRGKEEQVNSMKAALEDRDRDLRGRGTCAQVcstpQFEEL 910
Cdd:TIGR02168 754 KELTELEAEIEELEERLEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRE----RLESL 829
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 911 ESVLKEKDNEIKRIEVKLKDTESDVSKMSELLKEVQEENKFLKCQL-SHQKHQQASFPSQEELQTVISEKEKEITDLCNE 989
Cdd:TIGR02168 830 ERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELeALLNERASLEEALALLRSELEELSEELRELESK 909
|
730 740 750
....*....|....*....|....*....|....*.
gi 1907099785 990 LESLKNAVEHQRKKNNERRQHVEAIELESKDLLKRL 1025
Cdd:TIGR02168 910 RSELRRELEELREKLAQLELRLEGLEVRIDNLQERL 945
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
460-791 |
1.01e-11 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 69.58 E-value: 1.01e-11
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 460 LVSELNEKTGKLQQEgvqkknAEQAATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQskfvAKENEVQSLHSKLT 539
Cdd:COG1196 194 ILGELERQLEPLERQ------AEKAERYRELKEELKELEAELLLLKLRELEAELEELEAELE----ELEAELEELEAELA 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 540 DTLVSKQQLEQRLMQLMESEQKRASKEESLQIQVQDILEQNEALKAQIQQFHSQIAAQTSAsvlAEELHKVIAEKDKQLK 619
Cdd:COG1196 264 ELEAELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEERRRELEERLEELEEE---LAELEEELEELEEELE 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 620 QTEDSLANEQDHLASKEEELKDVQNmnfLLKAEVQKLQALANEQAATAHEVEKMQKSIHVKEDKIRLLEEQLQHEVASKM 699
Cdd:COG1196 341 ELEEELEEAEEELEEAEAELAEAEE---ALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLE 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 700 EELKILSEQNKALQSEVQKLQTAVSQQpnkdvveqmekciQEKDEKLRTVEELLETGLIQVATREEELSAIRTENSTLTR 779
Cdd:COG1196 418 RLEEELEELEEALAELEEEEEEEEEAL-------------EEAAEEEAELEEEEEALLELLAELLEEAALLEAALAELLE 484
|
330
....*....|..
gi 1907099785 780 EVQELKAKQSDQ 791
Cdd:COG1196 485 ELAEAAARLLLL 496
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
610-1215 |
1.83e-10 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 65.73 E-value: 1.83e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 610 VIAEKDKQLKQTEDSLANEQDHLA-SKEEELKDVQnmnfLLKAEVQKLQALANEQAATAHEVEKMQKSIHVKEDKIRLLE 688
Cdd:COG1196 194 ILGELERQLEPLERQAEKAERYRElKEELKELEAE----LLLLKLRELEAELEELEAELEELEAELEELEAELAELEAEL 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 689 EQLQHEVASKMEELKILSEQNKALQSEVQKLQtavsqqpnKDVVEQMEKCIQEKDEKLRTVEELLETgLIQVATREEELS 768
Cdd:COG1196 270 EELRLELEELELELEEAQAEEYELLAELARLE--------QDIARLEERRRELEERLEELEEELAEL-EEELEELEEELE 340
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 769 AIRTENSTLTREVQELKAKQSDQvsfVSLIEDLKRVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEVLKEEIG 848
Cdd:COG1196 341 ELEEELEEAEEELEEAEAELAEA---EEALLEAEAELAEAEEELEELAEELLEALRAAAELAAQLEELEEAEEALLERLE 417
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 849 NAQLEKAHQLSVTSQVQELQNLLRGKEEQVNSMKAALEDRDRDLRGRGTCAQVcstpQFEELESVLKEKDNEIKRIEVKL 928
Cdd:COG1196 418 RLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLE----EAALLEAALAELLEELAEAAARL 493
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 929 KDTESDVSKMSELLKEVQE-ENKFLKCQLSHQKHQQASFPSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNER 1007
Cdd:COG1196 494 LLLLEAEADYEGFLEGVKAaLLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAALQNIVVEDDEVAAAAIEYLKAAKAGR 573
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1008 -------RQHVEAIELESKDLLKRLFPTVSVPSNLnysEWLRGFEKKAKACVAGTSDAEAvkVLEHRLKEASEMHTLLQL 1080
Cdd:COG1196 574 atflpldKIRARAALAAALARGAIGAAVDLVASDL---READARYYVLGDTLLGRTLVAA--RLEAALRRAVTLAGRLRE 648
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1081 ECEKYKSVLAETEGILQKLQRSVEQEESKWKIKADESQRMIKQMQSSFTASERELERLRQENKDMENLRREREHLEMELE 1160
Cdd:COG1196 649 VTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERELAEAEEERLEEELEEEALEE 728
|
570 580 590 600 610
....*....|....*....|....*....|....*....|....*....|....*
gi 1907099785 1161 KAEMERstyvmevRELKTQLNETHSKLQNEQTERKKVADDLHKAQQSLNSIHSKI 1215
Cdd:COG1196 729 QLEAER-------EELLEELLEEEELLEEEALEELPEPPDLEELERELERLEREI 776
|
|
| Rib_recp_KP_reg |
pfam05104 |
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards ... |
29-151 |
1.95e-10 |
|
Ribosome receptor lysine/proline rich region; This highly conserved region is found towards the C-terminus of the transmembrane domain. The function is unclear.
Pssm-ID: 461548 [Multi-domain] Cd Length: 140 Bit Score: 60.14 E-value: 1.95e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 29 MKETLYDEVLAKQKREQKLISTKTDKKKAEKKKNKKK------EIQNGTLRESD----SEHVPRDFKLSDASPAEDEqfV 98
Cdd:pfam05104 1 MKETSYEEALAKQRRELKKTPTEKEKKKKEKKKEKKKkskkkeEKPNGKLPESEqadeSEEEPREFKTPDEAPSAAL--E 78
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1907099785 99 PAPLNVAETSSSVRERKKKEKKQKPSLEEQVIKESDASKIPGKKVEPVLVTKQ 151
Cdd:pfam05104 79 PEPVPTPVPAPVEPEPAPPSESPAPSPKEKKKKEKKSAKVEPAETPEAVQPKP 131
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
605-1194 |
2.82e-10 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 65.09 E-value: 2.82e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 605 EELHKVIAEKDKQLKQTEDSLANEQDHLASKEEELKDVqnmnfllKAEVQKLQALANEQAATAHEVEKMQKSIHVKEDKI 684
Cdd:PRK03918 189 ENIEELIKEKEKELEEVLREINEISSELPELREELEKL-------EKEVKELEELKEEIEELEKELESLEGSKRKLEEKI 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 685 RLLEEQLQhEVASKMEELKilseqnkalqsevqklqtavsqqpnkDVVEQMEKcIQEKDEKLRTVEELLETGLIQVATRE 764
Cdd:PRK03918 262 RELEERIE-ELKKEIEELE--------------------------EKVKELKE-LKEKAEEYIKLSEFYEEYLDELREIE 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 765 EELSAIRTENSTLTREVQELKAKQSDqvsfVSLIEDLKRVIHEKDGQIKSVEELLEVELLKVANKEKTVQALK-QEIEVL 843
Cdd:PRK03918 314 KRLSRLEEEINGIEERIKELEEKEER----LEELKKKLKELEKRLEELEERHELYEEAKAKKEELERLKKRLTgLTPEKL 389
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 844 KEEIGNAQLEKahqLSVTSQVQELQNLLRGKEEQVNSMKAALEDRDRdlrGRGTCAqVCSTPQFEELESVLKEK-DNEIK 922
Cdd:PRK03918 390 EKELEELEKAK---EEIEEEISKITARIGELKKEIKELKKAIEELKK---AKGKCP-VCGRELTEEHRKELLEEyTAELK 462
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 923 RIEVKLKDTESDVSKMSELLKEVQEENKFLKCQLSHQKHQQASFPSQEELQTVISEKEKEITDLCNELESLKNAVEHQRK 1002
Cdd:PRK03918 463 RIEKELKEIEEKERKLRKELRELEKVLKKESELIKLKELAEQLKELEEKLKKYNLEELEKKAEEYEKLKEKLIKLKGEIK 542
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1003 KNNERRQHVEAIELESKDLLKRLFPTVSVPSNLNYSEWLRGF------EKKAKACVAGTSDAEAVKVLEHRLKEASEMHT 1076
Cdd:PRK03918 543 SLKKELEKLEELKKKLAELEKKLDELEEELAELLKELEELGFesveelEERLKELEPFYNEYLELKDAEKELEREEKELK 622
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1077 LLQLECEKYKSVLAETEGILQKLQRSVEQEESKWkikadeSQRMIKQMQSSFTASERELERLRQENKDMENLRREREHLE 1156
Cdd:PRK03918 623 KLEEELDKAFEELAETEKRLEELRKELEELEKKY------SEEEYEELREEYLELSRELAGLRAELEELEKRREEIKKTL 696
|
570 580 590 600
....*....|....*....|....*....|....*....|....
gi 1907099785 1157 MELEKAEMERSTYVMEVRELK------TQLNETHSKLQNEQTER 1194
Cdd:PRK03918 697 EKLKEELEEREKAKKELEKLEkalervEELREKVKKYKALLKER 740
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
310-966 |
5.24e-10 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 64.31 E-value: 5.24e-10
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 310 LKEKSGVIKEALKKSNKgELSGLLHQLQEKERLLSAMKEDAAASKERCKQLTQEMMTEKER---SSVVIARMKDRIGTLE 386
Cdd:TIGR02168 300 LEQQKQILRERLANLER-QLEELEAQLEELESKLDELAEELAELEEKLEELKEELESLEAEleeLEAELEELESRLEELE 378
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 387 KEHNIFQNKMHASYQETQQMQMKfqqvQEQMEAEIAHLKQENGILRdavSNTTNQLESKQSAELNKLRQDCGRLVSELNE 466
Cdd:TIGR02168 379 EQLETLRSKVAQLELQIASLNNE----IERLEARLERLEDRRERLQ---QEIEELLKKLEEAELKELQAELEELEEELEE 451
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 467 KTGKLQQEGVQKKNAEQAATQLKVQLQEAERRWEEVQSyirkRTAEHEAAQQDLQSKFVAKENEVQSLhSKLTDTLvskq 546
Cdd:TIGR02168 452 LQEELERLEEALEELREELEEAEQALDAAERELAQLQA----RLDSLERLQENLEGFSEGVKALLKNQ-SGLSGIL---- 522
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 547 qleQRLMQLMESEQK-RASKEESLQIQVQDILEQNEALKAQIQQFHSQIAAQTSA-SVLAEELHKVIAEKDKQLKQTEDS 624
Cdd:TIGR02168 523 ---GVLSELISVDEGyEAAIEAALGGRLQAVVVENLNAAKKAIAFLKQNELGRVTfLPLDSIKGTEIQGNDREILKNIEG 599
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 625 LANEQDHLASKEEELKDVqnMNFLLK--AEVQKLQALANEQAATAH---------EVEKMQKSIHVKEDKIRLLEEQLQH 693
Cdd:TIGR02168 600 FLGVAKDLVKFDPKLRKA--LSYLLGgvLVVDDLDNALELAKKLRPgyrivtldgDLVRPGGVITGGSAKTNSSILERRR 677
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 694 EVASKMEELKILSEQNKALQSEVQKLQTAVSQQpnKDVVEQMEKCIQEKDEKLRTVEELLETGLIQVATREEELSAIRTE 773
Cdd:TIGR02168 678 EIEELEEKIEELEEKIAELEKALAELRKELEEL--EEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKE 755
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 774 NSTLTREVQELKAKqsdqvsfvslIEDLKRVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEVLKEEIGNAQLE 853
Cdd:TIGR02168 756 LTELEAEIEELEER----------LEEAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLLNEEAANLRER 825
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 854 KAHQL----SVTSQVQELQNLLRGKEEQVNSMKAALEDRDRDLrgrgtcaqvcstpqfEELESVLKEKDNEIKRIEVKLK 929
Cdd:TIGR02168 826 LESLErriaATERRLEDLEEQIEELSEDIESLAAEIEELEELI---------------EELESELEALLNERASLEEALA 890
|
650 660 670
....*....|....*....|....*....|....*..
gi 1907099785 930 DTESDVSKMSELLKEVQEENKFLKCQLSHQKHQQASF 966
Cdd:TIGR02168 891 LLRSELEELSEELRELESKRSELRRELEELREKLAQL 927
|
|
| Smc |
COG1196 |
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ... |
328-872 |
1.18e-09 |
|
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain] Cd Length: 983 Bit Score: 63.03 E-value: 1.18e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 328 ELSGLLHQLQEKERLLSAMKEDAAASKERCKQLTQEMMTEKERssvvIARMKDRIGTLEKEHnifqnkmhasyQETQQMQ 407
Cdd:COG1196 268 ELEELRLELEELELELEEAQAEEYELLAELARLEQDIARLEER----RRELEERLEELEEEL-----------AELEEEL 332
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 408 MKFQQVQEQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQdcgrlvselnektgkLQQEGVQKKNAEQAATQ 487
Cdd:COG1196 333 EELEEELEELEEELEEAEEELEEAEAELAEAEEALLEAEAELAEAEEE---------------LEELAEELLEALRAAAE 397
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 488 LKVQLQEAERRWEEvqsyIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASKEE 567
Cdd:COG1196 398 LAAQLEELEEAEEA----LLERLERLEEELEELEEALAELEEEEEEEEEALEEAAEEEAELEEEEEALLELLAELLEEAA 473
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 568 SLQIQVQDILEQNEALKAQIQQFHSQIA--AQTSASVLAEELHKVIAEKDKQLKQTEDSLANEQDHLASKEEE-LKDVQN 644
Cdd:COG1196 474 LLEAALAELLEELAEAAARLLLLLEAEAdyEGFLEGVKAALLLAGLRGLAGAVAVLIGVEAAYEAALEAALAAaLQNIVV 553
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 645 MNFLLKAEVQKLQALANEQAATAHEVEKMQKSIHVKEDKIRLLEEQLQHEVASkmeELKILSEQNKALQSEVqkLQTAVS 724
Cdd:COG1196 554 EDDEVAAAAIEYLKAAKAGRATFLPLDKIRARAALAAALARGAIGAAVDLVAS---DLREADARYYVLGDTL--LGRTLV 628
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 725 QQPNKDVVEQMEKCIQEKDEKLRTVEELLETGLIQVATREEELSAIRTENSTLTREVQELKAKQSDQVSFVSLIEDLKRV 804
Cdd:COG1196 629 AARLEAALRRAVTLAGRLREVTLEGEGGSAGGSLTGGSRRELLAALLEAEAELEELAERLAEEELELEEALLAEEEEERE 708
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907099785 805 IHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEVLKEEIGNAQLEKAhqLSVTSQVQELQNLLR 872
Cdd:COG1196 709 LAEAEEERLEEELEEEALEEQLEAEREELLEELLEEEELLEEEALEELPEP--PDLEELERELERLER 774
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
478-1020 |
1.23e-09 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 63.24 E-value: 1.23e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 478 KKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSkltdtlvSKQQLEQRLMQLME 557
Cdd:PTZ00121 1236 KKDAEEAKKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADE-------AKKAEEKKKADEAK 1308
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 558 SEQKRASKEESLQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQLKQTEDSLANEQDHLASKEE 637
Cdd:PTZ00121 1309 KKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAE 1388
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 638 ELKDVQNmnflLKAEVQKLQALANEQAATAHEVEKMQKSIHVKEDKIRLLEEQLQHEVASKMEELKILSEQNKALQSEVQ 717
Cdd:PTZ00121 1389 EKKKADE----AKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKK 1464
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 718 KLQTAVSQQPNKDVVEQMEKCiqekDEKLRTVEELLETGLIQVATREEELSAIRTENSTLTREVQEL-KAKQSDQVSFVS 796
Cdd:PTZ00121 1465 KAEEAKKADEAKKKAEEAKKA----DEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAkKAEEAKKADEAK 1540
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 797 LIEDLKRVIH-EKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEVLKEEIGNAQLEKAHQLSVTSQVQELqnllrgKE 875
Cdd:PTZ00121 1541 KAEEKKKADElKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKMKAEEA------KK 1614
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 876 EQVNSMKAALEDRDRDLRGRGTCAQVCSTPQFEELESVLKEKDNEIKRIEVKLKDTESDVSKMSELLKEVQEENKflKCQ 955
Cdd:PTZ00121 1615 AEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKK--AAE 1692
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907099785 956 LSHQKHQQASfpSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNERRQHVEAIELESKD 1020
Cdd:PTZ00121 1693 ALKKEAEEAK--KAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEE 1755
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
418-1023 |
1.41e-09 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 62.35 E-value: 1.41e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 418 EAEIAHLKQENGILRDAVSNTTNQLeSKQSAELNKLRQDCGRLVSELNEKTGklqqegvQKKNAEQAATQLKVQLQEAER 497
Cdd:TIGR04523 67 EEKINNSNNKIKILEQQIKDLNDKL-KKNKDKINKLNSDLSKINSEIKNDKE-------QKNKLEVELNKLEKQKKENKK 138
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 498 RWEEVQSYIRKRTAEHEaaqqDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQ----------RLMQLMESEQKRASKEE 567
Cdd:TIGR04523 139 NIDKFLTEIKKKEKELE----KLNNKYNDLKKQKEELENELNLLEKEKLNIQKnidkiknkllKLELLLSNLKKKIQKNK 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 568 SLQIQVQDILEQNEALKAQIQQFHSQIaaqtsasvlaEELHKVIAEKDKQLKQTEDSLANEQDHLASKEEELKDVQNMNF 647
Cdd:TIGR04523 215 SLESQISELKKQNNQLKDNIEKKQQEI----------NEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIK 284
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 648 LLKAEVQKLQA----LANEQAATAHEVEKMQksIHVKEDKIRLLEEQL---QHEVASKMEELKILSEQNKALQSEVQKLQ 720
Cdd:TIGR04523 285 ELEKQLNQLKSeisdLNNQKEQDWNKELKSE--LKNQEKKLEEIQNQIsqnNKIISQLNEQISQLKKELTNSESENSEKQ 362
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 721 TAVSQQPNkdvveQMEKCIQEKDEKLRTVEELLetglIQVATREEELSAIRTENSTLTrevQELKAKQSDQVSFVSLIED 800
Cdd:TIGR04523 363 RELEEKQN-----EIEKLKKENQSYKQEIKNLE----SQINDLESKIQNQEKLNQQKD---EQIKKLQQEKELLEKEIER 430
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 801 LKRVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEVLKEEIGNAQLE-KAHQLSVTSQVQELQNLlrgkeeqvN 879
Cdd:TIGR04523 431 LKETIIKNNSEIKDLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNlEQKQKELKSKEKELKKL--------N 502
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 880 SMKAALEDRDRDLRGRgtcaQVCSTPQFEELESVLKEKDNEIKRIEVKLKDTESDVSKmSELLKEVQEENKflkcQLSHQ 959
Cdd:TIGR04523 503 EEKKELEEKVKDLTKK----ISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKK-ENLEKEIDEKNK----EIEEL 573
|
570 580 590 600 610 620
....*....|....*....|....*....|....*....|....*....|....*....|....*
gi 1907099785 960 KHQQASF-PSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNERRQHVEAIELESKDLLK 1023
Cdd:TIGR04523 574 KQTQKSLkKKQEEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEKLSSIIKNIKS 638
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
460-1193 |
9.37e-09 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 60.08 E-value: 9.37e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 460 LVSELNEKTGKLQQEgvqkKNAEQAATQLKVQLQEAErrweevQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLT 539
Cdd:TIGR02169 192 IIDEKRQQLERLRRE----REKAERYQALLKEKREYE------GYELLKEKEALERQKEAIERQLASLEEELEKLTEEIS 261
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 540 DTLVSKQQLEQRLMQLmESEQKRASKEESLQIQvqdilEQNEALKAQIQQFHSQIAA-QTSASVLAEELHKVIAEKDKQL 618
Cdd:TIGR02169 262 ELEKRLEEIEQLLEEL-NKKIKDLGEEEQLRVK-----EKIGELEAEIASLERSIAEkERELEDAEERLAKLEAEIDKLL 335
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 619 KQTEDSlaneqdhlaskEEELKDVQNMNFLLKAEVQKLQALANEQAATAHEVEKMQKSIHVKEDKIRLLEEQLQHEVASK 698
Cdd:TIGR02169 336 AEIEEL-----------EREIEEERKRRDKLTEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINEL 404
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 699 MEELKILSEQNKALQSEV----QKLQTAVSQQPN-KDVVEQMEKCIQEKDEKLRTVEELLETGLIQVATREEELSAIRTE 773
Cdd:TIGR02169 405 KRELDRLQEELQRLSEELadlnAAIAGIEAKINElEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKE 484
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 774 NSTLTREVQELKAKQS-------DQVSFVSLIEDLKRVIHEKDGQ-IKSVEELLEVELLKVANKEKTV-----QALKQEI 840
Cdd:TIGR02169 485 LSKLQRELAEAEAQARaseervrGGRAVEEVLKASIQGVHGTVAQlGSVGERYATAIEVAAGNRLNNVvveddAVAKEAI 564
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 841 EVLKEEignaQLEKAHQLSVTSQVQELQNLLRGKEEQVnsMKAALEDRDRDLRGRGTCAQVC-STPQFEELESV------ 913
Cdd:TIGR02169 565 ELLKRR----KAGRATFLPLNKMRDERRDLSILSEDGV--IGFAVDLVEFDPKYEPAFKYVFgDTLVVEDIEAArrlmgk 638
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 914 ---------LKEKDNEIKRIEVKLKDTESDVSKMSELLKEVQEENKFLKCQLSH--------QKHQQASFPSQEELQTVI 976
Cdd:TIGR02169 639 yrmvtlegeLFEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSlqselrriENRLDELSQELSDASRKI 718
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 977 SEKEKEITDLCNELESLKNAVEHQRKKNNERRQHVEAIELESKDLLKRLFPtvsvpsnlnysewlrgFEKKAKACVAGTS 1056
Cdd:TIGR02169 719 GEIEKEIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKSELKELEARIEE----------------LEEDLHKLEEALN 782
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1057 DAEAvKVLEHRLKEASEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESK----------WKIKADESQRMIKQMQS 1126
Cdd:TIGR02169 783 DLEA-RLSHSRIPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEiqelqeqridLKEQIKSIEKEIENLNG 861
|
730 740 750 760 770 780 790
....*....|....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907099785 1127 SFTASERELERLRQENKDME----NLRREREHLEMELEKAEMERSTYVMEVRELKTQLNETHSKLQNEQTE 1193
Cdd:TIGR02169 862 KKEELEEELEELEAALRDLEsrlgDLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEE 932
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
459-982 |
1.89e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 59.38 E-value: 1.89e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 459 RLVSELNEKTGKLQQEGVQKKNAEQAATQLKVQLQEAeRRWEEVQSYIRKRTAEHEAAQQDLQSKfvAKENEVQSLHSKL 538
Cdd:PTZ00121 1278 RKADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEA-KKADEAKKKAEEAKKKADAAKKKAEEA--KKAAEAAKAEAEA 1354
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 539 TDTLVSKQQLEQRLMQLMESEQKRasKEESLQIQVQDILEQNEALKA--QIQQFHSQIAAQTSASVLAEELHKVIAEKDK 616
Cdd:PTZ00121 1355 AADEAEAAEEKAEAAEKKKEEAKK--KADAAKKKAEEKKKADEAKKKaeEDKKKADELKKAAAAKKKADEAKKKAEEKKK 1432
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 617 --QLKQTEDSlANEQDHLASKEEELKDVQNMNflLKAEVQKLQALANEQAATAHEVEKMQKSihVKEDKIRLLEEQLQHE 694
Cdd:PTZ00121 1433 adEAKKKAEE-AKKADEAKKKAEEAKKAEEAK--KKAEEAKKADEAKKKAEEAKKADEAKKK--AEEAKKKADEAKKAAE 1507
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 695 VASKMEELKILSEQNKAlqSEVQKLQTAVSQQPNKDVVEQMEKCIQEKDEKLRTVEELLEtglIQVATREEELSAIRTEN 774
Cdd:PTZ00121 1508 AKKKADEAKKAEEAKKA--DEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKK---AEEAKKAEEDKNMALRK 1582
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 775 STLTREVQELKAKQSDQVSFVSLIEDLKRVIHEKDGQIKSVEELLEVELLKVAN--KEKTVQALKQEIEVLKEEIGNAQl 852
Cdd:PTZ00121 1583 AEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEqlKKKEAEEKKKAEELKKAEEENKI- 1661
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 853 eKAHQLSVTSQVQELQNLLRGKEEQVNSMKAALEDRDRDLRGRGTCAQVCSTPQFEELESVLKEKDNEIKRIEVKLKDTE 932
Cdd:PTZ00121 1662 -KAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAE 1740
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|
gi 1907099785 933 SDVSKMSELLKEVQEENKFLKCQLSHQKHQQasfPSQEELQTVISEKEKE 982
Cdd:PTZ00121 1741 EDKKKAEEAKKDEEEKKKIAHLKKEEEKKAE---EIRKEKEAVIEEELDE 1787
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
477-1251 |
2.79e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 58.61 E-value: 2.79e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 477 QKKNAEQAATQLKVQLQEAERRWEEvqsyiRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLM 556
Cdd:PTZ00121 1096 AFGKAEEAKKTETGKAEEARKAEEA-----KKKAEDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAEDARKAEEAR 1170
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 557 ESEQKRASKEESLQIQVQDILEQNEALKAQiqqfHSQIAAQTSASVLAEELHKVIAEKD-KQLKQTEDSLANEQDhlASK 635
Cdd:PTZ00121 1171 KAEDAKKAEAARKAEEVRKAEELRKAEDAR----KAEAARKAEEERKAEEARKAEDAKKaEAVKKAEEAKKDAEE--AKK 1244
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 636 EEElkdVQNMNFLLKAEVQKLQALANEQAATAHEVEKmqksihvKEDKIRLLEEQLQHEVASKMEELKILSEQNKALQSE 715
Cdd:PTZ00121 1245 AEE---ERNNEEIRKFEEARMAHFARRQAAIKAEEAR-------KADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEA 1314
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 716 VQKLQTAVSQQPNKDVVEQMEKCIQEKDEKLRTVEELLETGLIQVATREEELSAIRTENSTLTREVQELKAKQSDqvsfv 795
Cdd:PTZ00121 1315 KKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEE----- 1389
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 796 sliedlKRVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEVLKEEIGNAQLEKAHQlsvtsqVQELQNLLRGKE 875
Cdd:PTZ00121 1390 ------KKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKK------ADEAKKKAEEAK 1457
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 876 EQVNSMKAALEDRDRDlrgrgtcaqvcstpqfeelesVLKEKDNEIKRIEVKLKDTESDVSKMSELLKEVQEENKFLKCQ 955
Cdd:PTZ00121 1458 KAEEAKKKAEEAKKAD---------------------EAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAK 1516
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 956 LSHQKHQQASFPSQEELQTVISEKEKEITDLCNEL---ESLKNAVEHQRKKNNERRQHVEAIELESKDLLKRLFPTVSVP 1032
Cdd:PTZ00121 1517 KAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELkkaEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEE 1596
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1033 SNLNYSEwlrgfEKKAKACVAGTSDAEAVKVLEHRLKEasemhtllqlECEKYKSVLAETEGILQKLQRSVEQEESKWKI 1112
Cdd:PTZ00121 1597 VMKLYEE-----EKKMKAEEAKKAEEAKIKAEELKKAE----------EEKKKVEQLKKKEAEEKKKAEELKKAEEENKI 1661
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1113 KADESQRMIKQmqssftaSERELERLRQENKDMENLRREREHLEMELEKAEMERSTYVMEVR---ELKTQLNETHSK--- 1186
Cdd:PTZ00121 1662 KAAEEAKKAEE-------DKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKkaeELKKAEEENKIKaee 1734
|
730 740 750 760 770 780
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907099785 1187 LQNEQTERKKVADDLHKAQQSLNSI-HSKISLKAAGDTVVIENSDISPEMESPEKETMSVSLNQTV 1251
Cdd:PTZ00121 1735 AKKEAEEDKKKAEEAKKDEEEKKKIaHLKKEEEKKAEEIRKEKEAVIEEELDEEDEKRRMEVDKKI 1800
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
575-1206 |
4.12e-08 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 58.23 E-value: 4.12e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 575 DILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDK--QLKQTEDSLANEQDHLASKEEELKDVQNMNFLLKAE 652
Cdd:PTZ00121 1082 DAKEDNRADEATEEAFGKAEEAKKTETGKAEEARKAEEAKKKaeDARKAEEARKAEDARKAEEARKAEDAKRVEIARKAE 1161
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 653 VQKlQALANEQAATAHEVEKMQKSIHV-KEDKIRLLEEQLQHEVASKMEELKILSEQNKAlqsEVQKLQTAVSQqpnkdv 731
Cdd:PTZ00121 1162 DAR-KAEEARKAEDAKKAEAARKAEEVrKAEELRKAEDARKAEAARKAEEERKAEEARKA---EDAKKAEAVKK------ 1231
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 732 VEQMEKCIQE--KDEKLRTVEELLETGLIQVATREEELSAIRTENSTLTREVQEL----KAKQSDQVSFVSLIEDLKRVI 805
Cdd:PTZ00121 1232 AEEAKKDAEEakKAEEERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAeekkKADEAKKAEEKKKADEAKKKA 1311
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 806 HEK------DGQIKSVEELLEVELLKVANKEKTVQALKQEIEVLKEEIGNAQLEKAHQLSVTSQVQELQNLLRGKEEQVn 879
Cdd:PTZ00121 1312 EEAkkadeaKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEK- 1390
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 880 smKAALEDRDRDLRGRGTCAQVCSTPQFEELESVLKEKDNEIKRIEvKLKDTESDVSKMSELLKEVQEENKFLKCQLSHQ 959
Cdd:PTZ00121 1391 --KKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKAD-EAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAE 1467
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 960 KHQQASFPSQ--------EELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNERRQHVEAIELESKDLLKRLFPTVSV 1031
Cdd:PTZ00121 1468 EAKKADEAKKkaeeakkaDEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKK 1547
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1032 PSNLNYSEWLRGFEKKAKAcvagtsdAEAVKVLEHRLKEASEMHTLLQLECEKYKSVLAETEGILQ-KLQRSVEQEESKW 1110
Cdd:PTZ00121 1548 ADELKKAEELKKAEEKKKA-------EEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKKmKAEEAKKAEEAKI 1620
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1111 KI----KADESQRMIKQMQSSFTASERELERLRQENKDMENLRREREHLEMELEKAEMERSTYVMEVRELKTQLNETHSK 1186
Cdd:PTZ00121 1621 KAeelkKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEE 1700
|
650 660
....*....|....*....|
gi 1907099785 1187 LQNEQTERKKVADDLHKAQQ 1206
Cdd:PTZ00121 1701 AKKAEELKKKEAEEKKKAEE 1720
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
311-1025 |
6.56e-08 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 57.39 E-value: 6.56e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 311 KEKSGVIKEALKKSNKGELSGLLHQLQEKERLLSAMKEDAAASKERCKQLT---QEMMTEKERSSVVIARMKDRIGTL-E 386
Cdd:TIGR02169 207 REKAERYQALLKEKREYEGYELLKEKEALERQKEAIERQLASLEEELEKLTeeiSELEKRLEEIEQLLEELNKKIKDLgE 286
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 387 KEHNIFQNKM---HASYQETQQMQMKFQQVQEQMEAEIAHLKQENGILRDAVSNTTNQLESKQsAELNKLRQDCGRLVSE 463
Cdd:TIGR02169 287 EEQLRVKEKIgelEAEIASLERSIAEKERELEDAEERLAKLEAEIDKLLAEIEELEREIEEER-KRRDKLTEEYAELKEE 365
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 464 LNEKTGKLQQEGVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKrtaeheaaqqdLQSKFVAKENEVQSLHSKLTDTLV 543
Cdd:TIGR02169 366 LEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDR-----------LQEELQRLSEELADLNAAIAGIEA 434
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 544 SKQQLEQRLMQLMESEQKRASKEESLQIQVQDILEQNEALKAQIQQFHSQIaaqtsasvlaEELHKVIAEKDKQLKQTED 623
Cdd:TIGR02169 435 KINELEEEKEDKALEIKKQEWKLEQLAADLSKYEQELYDLKEEYDRVEKEL----------SKLQRELAEAEAQARASEE 504
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 624 slanEQDHLASKEEELKDVQNMNFLLKAE---VQKLQALANEQAATAHEVEKMQKSIHVKEDKIRLLEEQLQ-------- 692
Cdd:TIGR02169 505 ----RVRGGRAVEEVLKASIQGVHGTVAQlgsVGERYATAIEVAAGNRLNNVVVEDDAVAKEAIELLKRRKAgratflpl 580
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 693 HEVASKMEELKILSEqNKALQSEV------QKLQTAVSQQ-PNKDVVEQMEKCIQEKDE-KLRTVE-ELLE--------- 754
Cdd:TIGR02169 581 NKMRDERRDLSILSE-DGVIGFAVdlvefdPKYEPAFKYVfGDTLVVEDIEAARRLMGKyRMVTLEgELFEksgamtggs 659
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 755 ---TGLIQVATRE-EELSAIRTENSTLTREVQELKAKQSDQVSFV----SLIEDLKRVIHEKDGQIKSVEELLEVELLKV 826
Cdd:TIGR02169 660 rapRGGILFSRSEpAELQRLRERLEGLKRELSSLQSELRRIENRLdelsQELSDASRKIGEIEKEIEQLEQEEEKLKERL 739
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 827 ANKEKTVQALKQEIEVLKEEIgnaqlekahqlsvtsqvQELQNLLRGKEEQVNSMKAALEDRDRDLRGRgtcaqvcstpQ 906
Cdd:TIGR02169 740 EELEEDLSSLEQEIENVKSEL-----------------KELEARIEELEEDLHKLEEALNDLEARLSHS----------R 792
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 907 FEELESVLKEKDNEIKRIEVKLKDTESDVSKMSELLKEVQEENKFLKCQLSHQKHQQASFPSQ--------EELQTVISE 978
Cdd:TIGR02169 793 IPEIQAELSKLEEEVSRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEienlngkkEELEEELEE 872
|
730 740 750 760
....*....|....*....|....*....|....*....|....*..
gi 1907099785 979 KEKEITDLCNELESLKNAVEHQRKKNNERRQHVEAIELESKDLLKRL 1025
Cdd:TIGR02169 873 LEAALRDLESRLGDLKKERDELEAQLRELERKIEELEAQIEKKRKRL 919
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
506-784 |
7.73e-08 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 56.99 E-value: 7.73e-08
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 506 IRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASKEESLQIQVQDILEQNEALKA 585
Cdd:TIGR02168 682 LEEKIEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLARLEAEVEQLEERIAQLSKELTELEA 761
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 586 QIQQFHSQIAaqtSASVLAEELHKVIAEKDKQLKQTEDSLANEQDHLASKEEELKD-----------VQNMNFLLKAEVQ 654
Cdd:TIGR02168 762 EIEELEERLE---EAEEELAEAEAEIEELEAQIEQLKEELKALREALDELRAELTLlneeaanlrerLESLERRIAATER 838
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 655 KLQALANEQAATAHEVEKMQKSIHVKEDKIRLLEEQLQH-----------------EVASKMEELKILSEQNKALQSEVQ 717
Cdd:TIGR02168 839 RLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEAllnerasleealallrsELEELSEELRELESKRSELRRELE 918
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907099785 718 KLQTAVSQQPNKdvVEQMEKCIQEKDEKLRTVEEL-LETGLIQVATREEELSAIRTENSTLTREVQEL 784
Cdd:TIGR02168 919 ELREKLAQLELR--LEGLEVRIDNLQERLSEEYSLtLEEAEALENKIEDDEEEARRRLKRLENKIKEL 984
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
386-1265 |
1.47e-07 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 56.21 E-value: 1.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 386 EKEHNIFQNKMHASYQET-QQMQMKFQQVQEQMEAEIAHLKQENGI---LRDAVSNTTNQLESKQ------SAELNKLRQ 455
Cdd:TIGR00606 173 QKFDEIFSATRYIKALETlRQVRQTQGQKVQEHQMELKYLKQYKEKaceIRDQITSKEAQLESSReivksyENELDPLKN 252
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 456 DCGRlVSELNEKTGKLQQEGVQKKNAEQAATQLKVQLQE--------AERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAK 527
Cdd:TIGR00606 253 RLKE-IEHNLSKIMKLDNEIKALKSRKKQMEKDNSELELkmekvfqgTDEQLNDLYHNHQRTVREKERELVDCQRELEKL 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 528 ENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASKEESLQIQVQ-DILEQNEALKAQIQQFHSQIAAQTS-----AS 601
Cdd:TIGR00606 332 NKERRLLNQEKTELLVEQGRLQLQADRHQEHIRARDSLIQSLATRLElDGFERGPFSERQIKNFHTLVIERQEdeaktAA 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 602 VLAEELHKVIAEKDKQLKQTEDSLANEQDHLASKEEELKDVQNMNFLLKAEVQKLQALANEQAATAHEVEKMQKSIHvKE 681
Cdd:TIGR00606 412 QLCADLQSKERLKQEQADEIRDEKKGLGRTIELKKEILEKKQEELKFVIKELQQLEGSSDRILELDQELRKAERELS-KA 490
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 682 DKIRLLEEQLQHEVASKMEELKILSEQNKALQSEVQKlqtavsqQPNKDVVEQMEKCIQEKDEKLRTVEELLETGLIQVA 761
Cdd:TIGR00606 491 EKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQL-------NHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDELT 563
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 762 TREEELSAIRTENSTLTREVQELKAKQSDQVSFVSLIEDLKRVIHEKDGQIKSVEELLEVELLKVANKEKTvQALKQEIE 841
Cdd:TIGR00606 564 SLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLFDVCGS-QDEESDLE 642
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 842 VLKEEIGNAQLEKAHQLSVTSQVQELQNLLRGKE-------EQVNSMKAALEDRDRDLRGRGTCAqvcsTPQFEELESVL 914
Cdd:TIGR00606 643 RLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENqsccpvcQRVFQTEAELQEFISDLQSKLRLA----PDKLKSTESEL 718
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 915 KEKDNEIKRIEVKLKDTESDVSKMSELLKEVQEENKFLKCQLSHQKHqqaSFPSQEELQTVISEKEKEITDLCNELESLK 994
Cdd:TIGR00606 719 KKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKN---DIEEQETLLGTIMPEEESAKVCLTDVTIME 795
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 995 NAVEhqRKKNNERRQHVEAIELESKDLlkrlfptvsvpsNLNYSEWLRGFEKKAKACVAGTSDAEAVKVLehrLKEASEM 1074
Cdd:TIGR00606 796 RFQM--ELKDVERKIAQQAAKLQGSDL------------DRTVQQVNQEKQEKQHELDTVVSKIELNRKL---IQDQQEQ 858
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1075 HTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKWKiKADESQRMIKQMQSSFTASERELERLRQENKDMENLRRERE- 1153
Cdd:TIGR00606 859 IQHLKSKTNELKSEKLQIGTNLQRRQQFEEQLVELST-EVQSLIREIKDAKEQDSPLETFLEKDQQEKEELISSKETSNk 937
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1154 --HLEMELEKAEMERSTYVME-------------VRELKTQLNETHSKLQNEQTERKKVADDLHKAQQSLNSIHSKISLK 1218
Cdd:TIGR00606 938 kaQDKVNDIKEKVKNIHGYMKdienkiqdgkddyLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWL 1017
|
890 900 910 920
....*....|....*....|....*....|....*....|....*..
gi 1907099785 1219 AAGDTVVIENSDISPEMESPEKETMSVSLNQtVTQLQQLLQEVNQQL 1265
Cdd:TIGR00606 1018 QDNLTLRKRENELKEVEEELKQHLKEMGQMQ-VLQMKQEHQKLEENI 1063
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
377-994 |
1.80e-07 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 55.89 E-value: 1.80e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 377 RMKDRIGTLEKEHNIFQNKMHASYQETQQMQMKFQQVQEQMEAEIAHLKQENGI---LRDAVSNTTNQLESKQ------- 446
Cdd:pfam15921 86 QVKDLQRRLNESNELHEKQKFYLRQSVIDLQTKLQEMQMERDAMADIRRRESQSqedLRNQLQNTVHELEAAKclkedml 165
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 447 ---SAELNKLR----------QDCGRLVSELNEKTGKLQQEgvQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAEH 513
Cdd:pfam15921 166 edsNTQIEQLRkmmlshegvlQEIRSILVDFEEASGKKIYE--HDSMSTMHFRSLGSAISKILRELDTEISYLKGRIFPV 243
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 514 EAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEqrLMQLMESEQKRASKEESLQIQVQDILEQNEALKAQIQQFHSQ 593
Cdd:pfam15921 244 EDQLEALKSESQNKIELLLQQHQDRIEQLISEHEVE--ITGLTEKASSARSQANSIQSQLEIIQEQARNQNSMYMRQLSD 321
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 594 IaaQTSASVLAEELHKVIAEKDKQLKQTEDSLANEQDHLASKEEELKDVQNMNFLLKAEVQKLQALANEQAATAHEVEKM 673
Cdd:pfam15921 322 L--ESTVSQLRSELREAKRMYEDKIEELEKQLVLANSELTEARTERDQFSQESGNLDDQLQKLLADLHKREKELSLEKEQ 399
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 674 QKSIHVKEDKIRLLEEQLQHEVASKMEELKILSEQNKALQSEVQ---KLQTAVSQQPNKDV-------------VEQMEK 737
Cdd:pfam15921 400 NKRLWDRDTGNSITIDHLRRELDDRNMEVQRLEALLKAMKSECQgqmERQMAAIQGKNESLekvssltaqlestKEMLRK 479
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 738 CIQEKDEKLRTVEELLETGLIQVATREEELSAIRTENSTLTR----------EVQELKAKQSDQVSFVSLIEDLKRVIHE 807
Cdd:pfam15921 480 VVEELTAKKMTLESSERTVSDLTASLQEKERAIEATNAEITKlrsrvdlklqELQHLKNEGDHLRNVQTECEALKLQMAE 559
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 808 KDGQIKSVEELLEVELLKVANKEKTVQALKQEIEVLKEEIGNAQLE----KAHQLSVTSQVQELQ-----------NLLR 872
Cdd:pfam15921 560 KDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRLElqefKILKDKKDAKIRELEarvsdlelekvKLVN 639
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 873 GKEEQVNSMKAALEDRDRDLRGRGTCAQVCS--TPQFEELESVLKEKDNEIK----RIEVKLKDTESDVSKMSELLKEVQ 946
Cdd:pfam15921 640 AGSERLRAVKDIKQERDQLLNEVKTSRNELNslSEDYEVLKRNFRNKSEEMEtttnKLKMQLKSAQSELEQTRNTLKSME 719
|
650 660 670 680
....*....|....*....|....*....|....*....|....*....
gi 1907099785 947 -EENKFLKCQLSHQKHQQASFPSQEELQTVISEKEKEITDLCNELESLK 994
Cdd:pfam15921 720 gSDGHAMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNANKEKHFLK 768
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
369-1173 |
2.11e-07 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 55.46 E-value: 2.11e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 369 ERSSVVIARMKDRIGTLEKEHNifqnkmHA-SYQETQQmqmkfqqvqEQMEAEIAHLKQENGILRDAVSNTTNQLESKQ- 446
Cdd:TIGR02169 187 ERLDLIIDEKRQQLERLRRERE------KAeRYQALLK---------EKREYEGYELLKEKEALERQKEAIERQLASLEe 251
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 447 -----SAELNKLRQDCGRLVSELNEKTGKLQQEG------VQKK---------NAEQAATQLKVQLQEAERRWEEVQSYI 506
Cdd:TIGR02169 252 eleklTEEISELEKRLEEIEQLLEELNKKIKDLGeeeqlrVKEKigeleaeiaSLERSIAEKERELEDAEERLAKLEAEI 331
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 507 RKRTAEHEAAQQDLQSKFVAKE---NEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASKEESLQIQVQDILEQNEAL 583
Cdd:TIGR02169 332 DKLLAEIEELEREIEEERKRRDkltEEYAELKEELEDLRAELEEVDKEFAETRDELKDYREKLEKLKREINELKRELDRL 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 584 KAQIQQFHSQIAaqtsasvlaeELHKVIAEKDKQLKQTEDSLANEQDHLASKEEELKDVQNMnflLKAEVQKLQALANEQ 663
Cdd:TIGR02169 412 QEELQRLSEELA----------DLNAAIAGIEAKINELEEEKEDKALEIKKQEWKLEQLAAD---LSKYEQELYDLKEEY 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 664 AATAHEVEKMQKSIHVKEDKIRLLEEQLQHEVASKMeelkILSEQNKALQSEVQKL-----------QTAVSQQPNKDVV 732
Cdd:TIGR02169 479 DRVEKELSKLQRELAEAEAQARASEERVRGGRAVEE----VLKASIQGVHGTVAQLgsvgeryataiEVAAGNRLNNVVV 554
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 733 EQ---MEKCIQ-EKDEKL---------------RTVEELLETGLIQVAT------REEELSAIRTENSTLTREVQELKAK 787
Cdd:TIGR02169 555 EDdavAKEAIElLKRRKAgratflplnkmrderRDLSILSEDGVIGFAVdlvefdPKYEPAFKYVFGDTLVVEDIEAARR 634
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 788 QSDQVSFVSLIEDLkrviHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEVLKEEIGNAQLEKAHQLSVTSQVQEL 867
Cdd:TIGR02169 635 LMGKYRMVTLEGEL----FEKSGAMTGGSRAPRGGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQE 710
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 868 QNLLRGKEEQVNSMKAALEDRDRDLRGRgtcaqvcstpqFEELESVLKEKDNEIKRIEVKLKDTESDVSKMSELLKEVQE 947
Cdd:TIGR02169 711 LSDASRKIGEIEKEIEQLEQEEEKLKER-----------LEELEEDLSSLEQEIENVKSELKELEARIEELEEDLHKLEE 779
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 948 ENKFLKCQLSHQKHQQASFPSQE------ELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNERRQHVEAIELESKDL 1021
Cdd:TIGR02169 780 ALNDLEARLSHSRIPEIQAELSKleeevsRIEARLREIEQKLNRLTLEKEYLEKEIQELQEQRIDLKEQIKSIEKEIENL 859
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1022 LKRLFPTVSVPSNLNYSewLRGFEKKAKACVAGTSDAEA-VKVLEHRLKEASEMHTLLQLECEKYKSVLAETEGILQKLQ 1100
Cdd:TIGR02169 860 NGKKEELEEELEELEAA--LRDLESRLGDLKKERDELEAqLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIE 937
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1101 RSV--EQEESKWKIKADESQRMIKQMQSSFTA-----------SERELERLRQENKDMENLRREREHLEMELEKAEMERS 1167
Cdd:TIGR02169 938 DPKgeDEEIPEEELSLEDVQAELQRVEEEIRAlepvnmlaiqeYEEVLKRLDELKEKRAKLEEERKAILERIEEYEKKKR 1017
|
....*.
gi 1907099785 1168 TYVMEV 1173
Cdd:TIGR02169 1018 EVFMEA 1023
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
337-952 |
2.61e-07 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 55.44 E-value: 2.61e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 337 QEKERLLSAMKEDAAASKERCKQLTQEMMTEKERSSVVIARMKDRIGTLEKEHNIFQNKMHASYQETQQMQMKFQQVQEQ 416
Cdd:TIGR00606 283 KDNSELELKMEKVFQGTDEQLNDLYHNHQRTVREKERELVDCQRELEKLNKERRLLNQEKTELLVEQGRLQLQADRHQEH 362
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 417 MEA------EIAHLKQENGILRDA-----VSNTTNQLESKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAA 485
Cdd:TIGR00606 363 IRArdsliqSLATRLELDGFERGPfserqIKNFHTLVIERQEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTI 442
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 486 TQLKVQLQEAERRWEEVQSYIRK---------------RTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQ 550
Cdd:TIGR00606 443 ELKKEILEKKQEELKFVIKELQQlegssdrileldqelRKAERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQ 522
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 551 RLMQLMESEQKRASKEeslqIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQLKQTEDSLANEQD 630
Cdd:TIGR00606 523 EMEQLNHHTTTRTQME----MLTKDKMDKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNK 598
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 631 HLASKEEELKDVQNMNFLLKAEVQKL----------QALANEQAATAHEVEKMQKSIHVKEDKIRLLE---EQLQHEVAS 697
Cdd:TIGR00606 599 ELASLEQNKNHINNELESKEEQLSSYedklfdvcgsQDEESDLERLKEEIEKSSKQRAMLAGATAVYSqfiTQLTDENQS 678
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 698 KMEELKILSEQNKALQSEVQKLQTAVSQQPNKdvVEQMEKCIQEKDEKLRTVEELLETGLIQVATREEELSAIRTENSTL 777
Cdd:TIGR00606 679 CCPVCQRVFQTEAELQEFISDLQSKLRLAPDK--LKSTESELKKKEKRRDEMLGLAPGRQSIIDLKEKEIPELRNKLQKV 756
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 778 TREVQELK---AKQSDQVSFVSLIEDLKRVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEVlkEEIGNAQLEK 854
Cdd:TIGR00606 757 NRDIQRLKndiEEQETLLGTIMPEEESAKVCLTDVTIMERFQMELKDVERKIAQQAAKLQGSDLDRTV--QQVNQEKQEK 834
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 855 AHQL-SVTSQVQELQNLLRGKEEQVNSMKAALEDRDRDLRGRGTCAQvcstpQFEELESVLKEKDNEIKRIEVKLKDTES 933
Cdd:TIGR00606 835 QHELdTVVSKIELNRKLIQDQQEQIQHLKSKTNELKSEKLQIGTNLQ-----RRQQFEEQLVELSTEVQSLIREIKDAKE 909
|
650
....*....|....*....
gi 1907099785 934 DVSKMSELLKEVQEENKFL 952
Cdd:TIGR00606 910 QDSPLETFLEKDQQEKEEL 928
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
308-800 |
4.06e-07 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 54.64 E-value: 4.06e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 308 DLLKEKSGVIKEALKKSNKgeLSGLLHQLQEKERLLSAMKedaaASKERCKQLTQEMMTEKERSSVviarMKDRIGTLEK 387
Cdd:TIGR04523 170 ELENELNLLEKEKLNIQKN--IDKIKNKLLKLELLLSNLK----KKIQKNKSLESQISELKKQNNQ----LKDNIEKKQQ 239
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 388 EHNIFQNKMHASYQETQQMQMKFQQVQEQMEAEIAHLKQENGILRDaVSNTTNQLESKQSAELNKLRQDCGRLV-SELNE 466
Cdd:TIGR04523 240 EINEKTTEISNTQTQLNQLKDEQNKIKKQLSEKQKELEQNNKKIKE-LEKQLNQLKSEISDLNNQKEQDWNKELkSELKN 318
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 467 KTGKLQQEGVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKfvakENEVQSLHSKLTDTLVSKQ 546
Cdd:TIGR04523 319 QEKKLEEIQNQISQNNKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKL----KKENQSYKQEIKNLESQIN 394
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 547 QLEQRLMQLMESEQKRASKEESLQIQVQDILEQNEALKAQIQQFHSQIA----AQTSASVLAEELHKVIAEKDKQLKQTE 622
Cdd:TIGR04523 395 DLESKIQNQEKLNQQKDEQIKKLQQEKELLEKEIERLKETIIKNNSEIKdltnQDSVKELIIKNLDNTRESLETQLKVLS 474
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 623 DSLANEQDHLASKEEELKDVQNMNFLLKAEV----QKLQALANEQAATAHEVEKMQKSIHVKEDKIRLLEEqlqhEVASK 698
Cdd:TIGR04523 475 RSINKIKQNLEQKQKELKSKEKELKKLNEEKkeleEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLED----ELNKD 550
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 699 MEELK--ILSEQNKALQSEVQKLQTAVSQQPNKDvvEQMEKCIQEKDEKLRTVEELLETGLIQVATREEELSAIRTENST 776
Cdd:TIGR04523 551 DFELKkeNLEKEIDEKNKEIEELKQTQKSLKKKQ--EEKQELIDQKEKEKKDLIKEIEEKEKKISSLEKELEKAKKENEK 628
|
490 500
....*....|....*....|....
gi 1907099785 777 LTREVQELKAKQSDQVSFVSLIED 800
Cdd:TIGR04523 629 LSSIIKNIKSKKNKLKQEVKQIKE 652
|
|
| PTZ00121 |
PTZ00121 |
MAEBL; Provisional |
255-751 |
5.76e-07 |
|
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain] Cd Length: 2084 Bit Score: 54.38 E-value: 5.76e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 255 DMIKPDHVEGIQKSGTKKLKIETDKENAEVKFKDFLLSLKTMMFSEDealcvvdllKEKSGVIKEALKKSNKGELSGLLH 334
Cdd:PTZ00121 1318 DEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEE---------KAEAAEKKKEEAKKKADAAKKKAE 1388
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 335 QLQEKERLLSAMKEDAAASKERCKQLTQEMMTEKERSSVVIARMKDRIGTLEKEHNIfQNKMHASYQETQQMQMKFQQVQ 414
Cdd:PTZ00121 1389 EKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKK-ADEAKKKAEEAKKAEEAKKKAE 1467
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 415 EQMEAEIAHLKQENGilRDAVSNTTNQLESKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQK----KNAEQAATQLKV 490
Cdd:PTZ00121 1468 EAKKADEAKKKAEEA--KKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKaeeaKKADEAKKAEEK 1545
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 491 QLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRlmqlMESEQKRasKEESLQ 570
Cdd:PTZ00121 1546 KKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKLYEEEKK----MKAEEAK--KAEEAK 1619
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 571 IQVQDILEQNEALKAQIQQFHSQIAAQTSASVL--AEELHKVIAEKDKQLKQTEDSLANEqdhLASKEEELKDVQNMNFL 648
Cdd:PTZ00121 1620 IKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELkkAEEENKIKAAEEAKKAEEDKKKAEE---AKKAEEDEKKAAEALKK 1696
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 649 LKAEVQKLQALANEQAATAHEVEKMQKSIHVKEDKIRLLEEQLQHEvASKMEELKILSEQNKALQsEVQKLQTAVSQQPN 728
Cdd:PTZ00121 1697 EAEEAKKAEELKKKEAEEKKKAEELKKAEEENKIKAEEAKKEAEED-KKKAEEAKKDEEEKKKIA-HLKKEEEKKAEEIR 1774
|
490 500
....*....|....*....|...
gi 1907099785 729 KDVVEQMEKCIQEKDEKLRTVEE 751
Cdd:PTZ00121 1775 KEKEAVIEEELDEEDEKRRMEVD 1797
|
|
| SMC_prok_B |
TIGR02168 |
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ... |
369-725 |
1.12e-06 |
|
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain] Cd Length: 1179 Bit Score: 53.14 E-value: 1.12e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 369 ERSSVVIARmKDRIGTLEKEhnifQNKMHASYQETQQMQMKFQQVQEQMEAEIAHLKQENGILRDAVSNTTNQLEsKQSA 448
Cdd:TIGR02168 667 KTNSSILER-RREIEELEEK----IEELEEKIAELEKALAELRKELEELEEELEQLRKELEELSRQISALRKDLA-RLEA 740
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 449 ELNKLRQDCGRLVSELNEKTG-------KLQQEGVQKKNAEQAATQLKVQLQEAERRWEEvqsyIRKRTAEHEAAQQDLQ 521
Cdd:TIGR02168 741 EVEQLEERIAQLSKELTELEAeieeleeRLEEAEEELAEAEAEIEELEAQIEQLKEELKA----LREALDELRAELTLLN 816
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 522 SKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASKEESLQIQVQDILEQNEALKAQIQQFHSQIAAQTSAs 601
Cdd:TIGR02168 817 EEAANLRERLESLERRIAATERRLEDLEEQIEELSEDIESLAAEIEELEELIEELESELEALLNERASLEEALALLRSE- 895
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 602 vlAEELHKVIAEKDKQLKQTEDSLANEQDHLASKEEELKDVQNMnfllkaEVQKLQALANEQAATAHEVEKMQ----KSI 677
Cdd:TIGR02168 896 --LEELSEELRELESKRSELRRELEELREKLAQLELRLEGLEVR------IDNLQERLSEEYSLTLEEAEALEnkieDDE 967
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|....*...
gi 1907099785 678 HVKEDKIRLLEEQLQH----------EVASKMEELKILSEQNKALQSEVQKLQTAVSQ 725
Cdd:TIGR02168 968 EEARRRLKRLENKIKElgpvnlaaieEYEELKERYDFLTAQKEDLTEAKETLEEAIEE 1025
|
|
| Crescentin |
pfam19220 |
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament ... |
426-855 |
2.87e-06 |
|
Crescentin protein; This entry represents a bacterial equivalent to Intermediate Filament proteins, named crescentin, whose cytoskeletal function is required for the vibrioid and helical shapes of Caulobacter crescentus. Without crescentin, the cells adopt a straight-rod morphology. Crescentin has characteriztic features of IF proteins including the ability to assemble into filaments in vitro without energy or cofactor requirements. In vivo, crescentin forms a helical structure that colocalizes with the inner cell curvatures beneath the cytoplasmic membrane.
Pssm-ID: 437057 [Multi-domain] Cd Length: 401 Bit Score: 51.22 E-value: 2.87e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 426 QENGILRDAVSNTTNQLEskqsaELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAATQLKVQLQEAERrweevqsy 505
Cdd:pfam19220 3 QRNELLRVRLGEMADRLE-----DLRSLKADFSQLIEPIEAILRELPQAKSRLLELEALLAQERAAYGKLRR-------- 69
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 506 irkrtaeheaaqqdlqskfvakenEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASKEESLQIQVQDILEQNEALKA 585
Cdd:pfam19220 70 ------------------------ELAGLTRRLSAAEGELEELVARLAKLEAALREAEAAKEELRIELRDKTAQAEALER 125
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 586 QIQQFHSQIAAqtsasvLAEELhkviAEKDKQLKQTEDSLAneqdhlaSKEEELKDVQNMNFLLKAEVQKLQALANEQAA 665
Cdd:pfam19220 126 QLAAETEQNRA------LEEEN----KALREEAQAAEKALQ-------RAEGELATARERLALLEQENRRLQALSEEQAA 188
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 666 TAHEVEK----MQKSIHVKEDKIRLLEEQLQHEVASKMEELKILSEQNKALQSEV----QKLQTAVSQQPNKDVV-EQME 736
Cdd:pfam19220 189 ELAELTRrlaeLETQLDATRARLRALEGQLAAEQAERERAEAQLEEAVEAHRAERaslrMKLEALTARAAATEQLlAEAR 268
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 737 KCIQEKDEKLRTVEELLETGLIQVATREEELSAIRTENSTLTREVQELkakQSDQVSFVSLIEDLKRVIHEKDGQIKSVE 816
Cdd:pfam19220 269 NQLRDRDEAIRAAERRLKEASIERDTLERRLAGLEADLERRTQQFQEM---QRARAELEERAEMLTKALAAKDAALERAE 345
|
410 420 430 440
....*....|....*....|....*....|....*....|...
gi 1907099785 817 ELLEVELLKVANKEKTV----QALKQEIEVLKEEIGNAQLEKA 855
Cdd:pfam19220 346 ERIASLSDRIAELTKRFeverAALEQANRRLKEELQRERAERA 388
|
|
| sbcc |
TIGR00618 |
exonuclease SbcC; All proteins in this family for which functions are known are part of an ... |
352-1151 |
5.61e-06 |
|
exonuclease SbcC; All proteins in this family for which functions are known are part of an exonuclease complex with sbcD homologs. This complex is involved in the initiation of recombination to regulate the levels of palindromic sequences in DNA. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). [DNA metabolism, DNA replication, recombination, and repair]
Pssm-ID: 129705 [Multi-domain] Cd Length: 1042 Bit Score: 51.12 E-value: 5.61e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 352 ASKERCKQLTQEMmTEKERSSVVIARMKDRIGTLEKEHNIFQNKMHASYQETQQMQMKFQQVQEQMEAEIAHLKQENGIL 431
Cdd:TIGR00618 160 AKSKEKKELLMNL-FPLDQYTQLALMEFAKKKSLHGKAELLTLRSQLLTLCTPCMPDTYHERKQVLEKELKHLREALQQT 238
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 432 RDAVSNTTNQLESKQSAElnKLRQDCGRLVSELNEKTGKLqqegvqkknAEQAATQLKVQLQEAERRWEEVQSYIRKRTA 511
Cdd:TIGR00618 239 QQSHAYLTQKREAQEEQL--KKQQLLKQLRARIEELRAQE---------AVLEETQERINRARKAAPLAAHIKAVTQIEQ 307
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 512 EHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQleQRLMQLMESEQKRASKEESLQIQVQDILEQNEALKAQIQQFH 591
Cdd:TIGR00618 308 QAQRIHTELQSKMRSRAKLLMKRAAHVKQQSSIEEQ--RRLLQTLHSQEIHIRDAHEVATSIREISCQQHTLTQHIHTLQ 385
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 592 SQIAAQTSAS-VLAEELHKVIAEKDKQLKQTEdSLANEQDHLASKEEELKDVQNMNFLLKAEVQKLqalANEQAATAHEV 670
Cdd:TIGR00618 386 QQKTTLTQKLqSLCKELDILQREQATIDTRTS-AFRDLQGQLAHAKKQQELQQRYAELCAAAITCT---AQCEKLEKIHL 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 671 EKMQKSIHVKEDKIRLLEEQLQHEVASKMEELKILSEQN-------KALQSEVQKLQTAVSQQPNKDVVEQMEKCIQEKD 743
Cdd:TIGR00618 462 QESAQSLKEREQQLQTKEQIHLQETRKKAVVLARLLELQeepcplcGSCIHPNPARQDIDNPGPLTRRMQRGEQTYAQLE 541
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 744 EKLRTVEELLETGLIQVATREEELSAIRTENSTLTREVQELKAKQSDQVSFVSLIEDLkrvihekdGQIKSVEELLEVEL 823
Cdd:TIGR00618 542 TSEEDVYHQLTSERKQRASLKEQMQEIQQSFSILTQCDNRSKEDIPNLQNITVRLQDL--------TEKLSEAEDMLACE 613
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 824 LKVANKEKTVQALKQEIEVLKEeignaQLEKAHQLSVTSQVQELQNLLRGKEEqvnsmkaaledrdrdlrgrgtcaqvcs 903
Cdd:TIGR00618 614 QHALLRKLQPEQDLQDVRLHLQ-----QCSQELALKLTALHALQLTLTQERVR--------------------------- 661
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 904 tpqfEELESVLKEKDNEIKRIEVKLKDTESDVSKMSELLKEVQEENKFLKCQLshqkhqqasfpsqeelqTVISEKEKEI 983
Cdd:TIGR00618 662 ----EHALSIRVLPKELLASRQLALQKMQSEKEQLTYWKEMLAQCQTLLRELE-----------------THIEEYDREF 720
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 984 TDLCNELESLKNAVEHQRKKNNERRQHveaieleskdlLKRLFPTVSVPSNLNYSewlRGFEKKAKACVAGTSDAEAVKV 1063
Cdd:TIGR00618 721 NEIENASSSLGSDLAAREDALNQSLKE-----------LMHQARTVLKARTEAHF---NNNEEVTAALQTGAELSHLAAE 786
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1064 LEHRLKEASEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKWKIKADE---SQRMIKQMQSSFTASERELERLRQ 1140
Cdd:TIGR00618 787 IQFFNRLREEDTHLLKTLEAEIGQEIPSDEDILNLQCETLVQEEEQFLSRLEEksaTLGEITHQLLKYEECSKQLAQLTQ 866
|
810
....*....|.
gi 1907099785 1141 ENKDMENLRRE 1151
Cdd:TIGR00618 867 EQAKIIQLSDK 877
|
|
| PRK01156 |
PRK01156 |
chromosome segregation protein; Provisional |
598-1153 |
6.80e-06 |
|
chromosome segregation protein; Provisional
Pssm-ID: 100796 [Multi-domain] Cd Length: 895 Bit Score: 50.67 E-value: 6.80e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 598 TSASVLAEELHKVIAEKDKQLKQTEDSLAnEQDHLASKEEELKDVQNMnflLKAEVQKLQALANEQAATAHEVEKMQKSI 677
Cdd:PRK01156 131 NSIFVGQGEMDSLISGDPAQRKKILDEIL-EINSLERNYDKLKDVIDM---LRAEISNIDYLEEKLKSSNLELENIKKQI 206
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 678 HVKEDKIRLLEEQLQHEVA-------------SKMEELKILSEQNKALQSEVQKLQTAVSQQPNKDV-----VEQMEKCI 739
Cdd:PRK01156 207 ADDEKSHSITLKEIERLSIeynnamddynnlkSALNELSSLEDMKNRYESEIKTAESDLSMELEKNNyykelEERHMKII 286
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 740 QEKDEKLRTVEELLETGLIQVATREEELSAIRTENST---LTREVQELKAKQSDQVSFVSLIEDLKRVIHEKDG---QIK 813
Cdd:PRK01156 287 NDPVYKNRNYINDYFKYKNDIENKKQILSNIDAEINKyhaIIKKLSVLQKDYNDYIKKKSRYDDLNNQILELEGyemDYN 366
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 814 SVEELLEVELLKVANKEKTVQALKQEI-EVLKEEIGNAQLEKAHQLSVTSQVQELQNLLRGKEEQVNSMKAALEDRDRD- 891
Cdd:PRK01156 367 SYLKSIESLKKKIEEYSKNIERMSAFIsEILKIQEIDPDAIKKELNEINVKLQDISSKVSSLNQRIRALRENLDELSRNm 446
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 892 --LRGRGTCAQVCSTPQFEELESVLKEKDNEIKRIEVKLKDTESDVSKMSELLKEVQEENKFLkcqlshqkhQQASFPSQ 969
Cdd:PRK01156 447 emLNGQSVCPVCGTTLGEEKSNHIINHYNEKKSRLEEKIREIEIEVKDIDEKIVDLKKRKEYL---------ESEEINKS 517
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 970 EELQTVISEKEKEITDLCNELESLKNA-VEHQRKKNNERRQHVEAIELESKDLLKRLFPTVSVPSNLNYSEW------LR 1042
Cdd:PRK01156 518 INEYNKIESARADLEDIKIKINELKDKhDKYEEIKNRYKSLKLEDLDSKRTSWLNALAVISLIDIETNRSRSneikkqLN 597
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1043 GFEKKAKACVAGTSDAEA------------VKVLEHRLKEASEMHTL---LQLECEKYKSVLAETEGIlQKLQRSVEQEE 1107
Cdd:PRK01156 598 DLESRLQEIEIGFPDDKSyidksireieneANNLNNKYNEIQENKILiekLRGKIDNYKKQIAEIDSI-IPDLKEITSRI 676
|
570 580 590 600
....*....|....*....|....*....|....*....|....*.
gi 1907099785 1108 SKWKIKADESQRMIKQMQSSFTASERELERLRQENKDMENLRRERE 1153
Cdd:PRK01156 677 NDIEDNLKKSRKALDDAKANRARLESTIEILRTRINELSDRINDIN 722
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
733-1025 |
7.44e-06 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 50.31 E-value: 7.44e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 733 EQMEK--CIQEKDEKLRTVEELLETGLIQVATREEELSAIRTEN-STLTREVQELKAKQSDQVSFVSLIEDLKRVIHEKD 809
Cdd:PRK05771 4 VRMKKvlIVTLKSYKDEVLEALHELGVVHIEDLKEELSNERLRKlRSLLTKLSEALDKLRSYLPKLNPLREEKKKVSVKS 83
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 810 GQ--IKSVEELLEVELLKVANKEKTVQALKQEIEVLKEEIgnAQLEKAHQLSVtsqvqELQNLLRGKeeqvnSMKAALED 887
Cdd:PRK05771 84 LEelIKDVEEELEKIEKEIKELEEEISELENEIKELEQEI--ERLEPWGNFDL-----DLSLLLGFK-----YVSVFVGT 151
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 888 RDRDlrgrgtcaqvcstpQFEELESVlKEKDNEIKRIEVKLKDT------ESDVSKMSELLKEVQEENKflkcqlshqkh 961
Cdd:PRK05771 152 VPED--------------KLEELKLE-SDVENVEYISTDKGYVYvvvvvlKELSDEVEEELKKLGFERL----------- 205
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907099785 962 qqaSFPSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNERRQHVEA---IELESKDLLKRL 1025
Cdd:PRK05771 206 ---ELEEEGTPSELIREIKEELEEIEKERESLLEELKELAKKYLEELLALYEyleIELERAEALSKF 269
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
472-711 |
1.17e-05 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 49.63 E-value: 1.17e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 472 QQEGVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVakENEVQSLHSKLTDTLVSKQQLEQR 551
Cdd:COG3206 164 QNLELRREEARKALEFLEEQLPELRKELEEAEAALEEFRQKNGLVDLSEEAKLL--LQQLSELESQLAEARAELAEAEAR 241
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 552 LMQLmesEQKRASKEESLQIQVQDILEQNeaLKAQIQQFHSQIAAQtsaSVLAEELHKVIAEKDKQLKQTEDSLANEQDH 631
Cdd:COG3206 242 LAAL---RAQLGSGPDALPELLQSPVIQQ--LRAQLAELEAELAEL---SARYTPNHPDVIALRAQIAALRAQLQQEAQR 313
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 632 LASKeeelkdvqnmnflLKAEVQKLQALANEQAATAHEVEKMQKSIHVKEDKIRLLEEQLQ------HEVASKMEELKIL 705
Cdd:COG3206 314 ILAS-------------LEAELEALQAREASLQAQLAQLEARLAELPELEAELRRLEREVEvarelyESLLQRLEEARLA 380
|
....*.
gi 1907099785 706 SEQNKA 711
Cdd:COG3206 381 EALTVG 386
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
444-686 |
1.20e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 48.99 E-value: 1.20e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 444 SKQSAELNKLRQdcgrlvsELNEKTGKLQQEGVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQsk 523
Cdd:COG4942 23 AEAEAELEQLQQ-------EIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIA-- 93
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 524 fvAKENEVQSLHSKLTDTLVSKQQLEQ--RLMQLMESE--QKRASKEESLQIQVQDILEQNEALKAQIQQFHSQIAAQTS 599
Cdd:COG4942 94 --ELRAELEAQKEELAELLRALYRLGRqpPLALLLSPEdfLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEA 171
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 600 AsvlAEELHKVIAEKDKQLKQTEDSLANEQDHLASKEEELKDVQNMNFLLKAEVQKLQALANEQAATAHEVEKMQKSIHV 679
Cdd:COG4942 172 E---RAELEALLAELEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPAAGF 248
|
....*..
gi 1907099785 680 KEDKIRL 686
Cdd:COG4942 249 AALKGKL 255
|
|
| SMC_N |
pfam02463 |
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ... |
545-1268 |
1.26e-05 |
|
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain] Cd Length: 1161 Bit Score: 49.97 E-value: 1.26e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 545 KQQLEQRLMQLMESEQKRASKEESLQIQVQDILEQNEalKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQLKQTEDS 624
Cdd:pfam02463 171 KKEALKKLIEETENLAELIIDLEELKLQELKLKEQAK--KALEYYQLKEKLELEEEYLLYLDYLKLNEERIDLLQELLRD 248
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 625 LANEQDH---LASKEEELKDVQNMNFLLKAEVQKLQALANEQAATAHEVEKmQKSIHVKEDKIRLLEEQLQHEVASKMEE 701
Cdd:pfam02463 249 EQEEIESskqEIEKEEEKLAQVLKENKEEEKEKKLQEEELKLLAKEEEELK-SELLKLERRKVDDEEKLKESEKEKKKAE 327
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 702 LKILSEQNKALQSEVQKLQTAVSQQPNKDVVEQMEKCIQEKDEKLRTVEELLETGliqvatREEELSAIRTENSTLTREV 781
Cdd:pfam02463 328 KELKKEKEEIEELEKELKELEIKREAEEEEEEELEKLQEKLEQLEEELLAKKKLE------SERLSSAAKLKEEELELKS 401
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 782 QELKAKQSDQVSFVSLIEDLKRVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEVLKEEIGNAQLEKAHQLSVT 861
Cdd:pfam02463 402 EEEKEAQLLLELARQLEDLLKEEKKEELEILEEEEESIELKQGKLTEEKEELEKQELKLLKDELELKKSEDLLKETQLVK 481
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 862 SQVQELQNLLRGKEEQVNSMKAALEDRDRDLRGRGtcaqvcstPQFEELESVLKEKDNEIKRIEVKLKDTESDVSKMSEL 941
Cdd:pfam02463 482 LQEQLELLLSRQKLEERSQKESKARSGLKVLLALI--------KDGVGGRIISAHGRLGDLGVAVENYKVAISTAVIVEV 553
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 942 LKEVQEENKFLKCQL----SHQKHQQASFPSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNERRQHVEAIELE 1017
Cdd:pfam02463 554 SATADEVEERQKLVRalteLPLGARKLRLLIPKLKLPLKSIAVLEIDPILNLAQLDKATLEADEDDKRAKVVEGILKDTE 633
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1018 SKDLLKRLFPTVSVPSNLNYSEWLRGFEKKAKACVAGTSDAEAVKVLEHRLKEASEM-HTLLQLECEKYKSVLAETEGIL 1096
Cdd:pfam02463 634 LTKLKESAKAKESGLRKGVSLEEGLAEKSEVKASLSELTKELLEIQELQEKAESELAkEEILRRQLEIKKKEQREKEELK 713
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1097 QKLQRSVEQEESKWKIKADESQRMIKQMQSSFTASERELERLRQENKDMENLRREREhLEMELEKAEMERSTYVMEVREL 1176
Cdd:pfam02463 714 KLKLEAEELLADRVQEAQDKINEELKLLKQKIDEEEEEEEKSRLKKEEKEEEKSELS-LKEKELAEEREKTEKLKVEEEK 792
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1177 KTQLNETHSKLQNEQTERKKVADDLHKAQQSLNSIHSKISLKAAGDTVVIENSDISPEMESPEKETMSVSLNQTVTQLQQ 1256
Cdd:pfam02463 793 EEKLKAQEEELRALEEELKEEAELLEEEQLLIEQEEKIKEEELEELALELKEEQKLEKLAEEELERLEEEITKEELLQEL 872
|
730
....*....|..
gi 1907099785 1257 LLQEVNQQLTKE 1268
Cdd:pfam02463 873 LLKEEELEEQKL 884
|
|
| Nucleoporin_FG2 |
pfam15967 |
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of ... |
400-564 |
1.32e-05 |
|
Nucleoporin FG repeated region; Nucleoporin_FG2, or nucleoporin p58/p45, is a family of chordate nucleoporins. The proteins carry many repeats of the FG sequence motif.
Pssm-ID: 435043 [Multi-domain] Cd Length: 586 Bit Score: 49.28 E-value: 1.32e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 400 YQETQQMQmKFQQVQEQMEAEI------AHLKQENGI--LRDAVSNTTNQLEsKQSAELNKLRQDCGRLV--SELNEKTG 469
Cdd:pfam15967 250 CQDVENFQ-KFVKEQKQVQEEIsrmsskAMLKVQDDIkaLKQLLSVAASGLQ-RNSLAIDKLKIETAQELknADIALRTQ 327
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 470 KlQQEGVQKKNAEQA------ATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQ-------SKFVAKENEVQSLHS 536
Cdd:pfam15967 328 K-TPPGLQHENTAPAdyfrslVEQFEVQLQQYRQQIEELENHLTTQSSSSHITPQDLSlamqklyQTFVALAAQLQSVHE 406
|
170 180 190
....*....|....*....|....*....|..
gi 1907099785 537 KLtdTLVSKQQLEQRLMQLMES----EQKRAS 564
Cdd:pfam15967 407 NV--KILKEQYLGYRKAFLEDStdvfEAKRAE 436
|
|
| rad50 |
TIGR00606 |
rad50; All proteins in this family for which functions are known are involvedin recombination, ... |
346-1007 |
1.87e-05 |
|
rad50; All proteins in this family for which functions are known are involvedin recombination, recombinational repair, and/or non-homologous end joining.They are components of an exonuclease complex with MRE11 homologs. This family is distantly related to the SbcC family of bacterial proteins.This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Pssm-ID: 129694 [Multi-domain] Cd Length: 1311 Bit Score: 49.27 E-value: 1.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 346 MKEDAAASKERCKQLTQEMMTEKERSSVVIARMKDRIGT-------LEKEHNIFQNKMHASYQETQQMQMKFQQVQEQME 418
Cdd:TIGR00606 403 QEDEAKTAAQLCADLQSKERLKQEQADEIRDEKKGLGRTielkkeiLEKKQEELKFVIKELQQLEGSSDRILELDQELRK 482
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 419 AEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAATQLKVQLQEAERR 498
Cdd:TIGR00606 483 AERELSKAEKNSLTETLKKEVKSLQNEKADLDRKLRKLDQEMEQLNHHTTTRTQMEMLTKDKMDKDEQIRKIKSRHSDEL 562
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 499 WEEVQSYIRKRTaeheaaqqdLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASKEESLQIQV----- 573
Cdd:TIGR00606 563 TSLLGYFPNKKQ---------LEDWLHSKSKEINQTRDRLAKLNKELASLEQNKNHINNELESKEEQLSSYEDKLfdvcg 633
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 574 -QDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQLKQTEDSLANEQDHLaskEEELKDVQNMNFLLKAE 652
Cdd:TIGR00606 634 sQDEESDLERLKEEIEKSSKQRAMLAGATAVYSQFITQLTDENQSCCPVCQRVFQTEAEL---QEFISDLQSKLRLAPDK 710
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 653 VQKLQALANEQAATAHE----VEKMQKSIHVKEDKIRLLEEQLQHEVASKMEELKILSEQNKALQSEVQKLQTAVSQQPN 728
Cdd:TIGR00606 711 LKSTESELKKKEKRRDEmlglAPGRQSIIDLKEKEIPELRNKLQKVNRDIQRLKNDIEEQETLLGTIMPEEESAKVCLTD 790
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 729 KDVVEQMEKCIQEKDEKLRTVEELLET--GLIQVATREEELSAIRTENSTLTREVQELKAKQSDQVSFVSLIEDLKRVIH 806
Cdd:TIGR00606 791 VTIMERFQMELKDVERKIAQQAAKLQGsdLDRTVQQVNQEKQEKQHELDTVVSKIELNRKLIQDQQEQIQHLKSKTNELK 870
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 807 EKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEVLKEEIG-NAQLEKAHQLSVTSQVQELQNLLRGKEEQVNSMKAAL 885
Cdd:TIGR00606 871 SEKLQIGTNLQRRQQFEEQLVELSTEVQSLIREIKDAKEQDSpLETFLEKDQQEKEELISSKETSNKKAQDKVNDIKEKV 950
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 886 EDRDRDLRGRGTCAQvcstpqfEELESVLKEKDNEIKRIEVKLKDTESDVSKMSELLKEVQEENKFLKCQLSHQKHQQAS 965
Cdd:TIGR00606 951 KNIHGYMKDIENKIQ-------DGKDDYLKQKETELNTVNAQLEECEKHQEKINEDMRLMRQDIDTQKIQERWLQDNLTL 1023
|
650 660 670 680
....*....|....*....|....*....|....*....|..
gi 1907099785 966 FPSQEELQTVISEKEKEITDLcNELESLKNAVEHQRKKNNER 1007
Cdd:TIGR00606 1024 RKRENELKEVEEELKQHLKEM-GQMQVLQMKQEHQKLEENID 1064
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
494-1015 |
3.38e-05 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 48.37 E-value: 3.38e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 494 EAERRWEEVQSYIRK-----RTAEHEAAQQDLQSKFVAKENEVQSLHSKLT--DTLVSKQQLE--QRLMQLMESEQKRAS 564
Cdd:COG4913 222 DTFEAADALVEHFDDlerahEALEDAREQIELLEPIRELAERYAAARERLAelEYLRAALRLWfaQRRLELLEAELEELR 301
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 565 KE-ESLQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVlaEELHKVIAEKDKQLKQTEDSLANEQDHLASKEEELKDVQ 643
Cdd:COG4913 302 AElARLEAELERLEARLDALREELDELEAQIRGNGGDRL--EQLEREIERLERELEERERRRARLEALLAALGLPLPASA 379
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 644 nmnfllkAEVQKLQALANEQAATAHEvekMQKSIHVKEDKIRLLEEQLQHEVASKMEELKILSEQNKALQSEVQKLQTAV 723
Cdd:COG4913 380 -------EEFAALRAEAAALLEALEE---ELEALEEALAEAEAALRDLRRELRELEAEIASLERRKSNIPARLLALRDAL 449
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 724 SQQPNKD------VVEQMEkcIQEKDEK--------------------------LRTVEELLETGLIQ---VATREEELS 768
Cdd:COG4913 450 AEALGLDeaelpfVGELIE--VRPEEERwrgaiervlggfaltllvppehyaaaLRWVNRLHLRGRLVyerVRTGLPDPE 527
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 769 AIRTENSTLTRE-----------VQELKAKQSDQVSfVSLIEDLKRV---------------IHEKDGQ--IKSVEELLE 820
Cdd:COG4913 528 RPRLDPDSLAGKldfkphpfrawLEAELGRRFDYVC-VDSPEELRRHpraitragqvkgngtRHEKDDRrrIRSRYVLGF 606
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 821 VELLKVANKEKTVQALKQEIEVLKEEIgnAQLEKAHQlSVTSQVQELQNLLRGKEEQVNSMK-----AALEDRDRDLRGr 895
Cdd:COG4913 607 DNRAKLAALEAELAELEEELAEAEERL--EALEAELD-ALQERREALQRLAEYSWDEIDVASaereiAELEAELERLDA- 682
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 896 gtcaqvcSTPQFEELESVLKEKDNEIKRIEVKLKDTESDVSKMSELLKEVQEEnkflkCQLSHQKHQQASFPSQEELQTV 975
Cdd:COG4913 683 -------SSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEE-----LDELQDRLEAAEDLARLELRAL 750
|
570 580 590 600
....*....|....*....|....*....|....*....|
gi 1907099785 976 ISEKEKEITDLCNELESLKNAVEHQRKKNNERRQHVEAIE 1015
Cdd:COG4913 751 LEERFAAALGDAVERELRENLEERIDALRARLNRAEEELE 790
|
|
| PRK10929 |
PRK10929 |
putative mechanosensitive channel protein; Provisional |
351-805 |
3.44e-05 |
|
putative mechanosensitive channel protein; Provisional
Pssm-ID: 236798 [Multi-domain] Cd Length: 1109 Bit Score: 48.51 E-value: 3.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 351 AASKERCKQLTQEMmteKERSSVVIARMKDRIGTLEKEHNiFQNKMHASYQETQQmqmkFQQVQEQMEAEIAHLKQENGI 430
Cdd:PRK10929 19 AATAPDEKQITQEL---EQAKAAKTPAQAEIVEALQSALN-WLEERKGSLERAKQ----YQQVIDNFPKLSAELRQQLNN 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 431 LRDAVSNttnqLESKQSAelNKLRQDCGRLVSELNEKTGKLQQEgvQKKNAE---------QAATQLKVQLQEAERRwee 501
Cdd:PRK10929 91 ERDEPRS----VPPNMST--DALEQEILQVSSQLLEKSRQAQQE--QDRAREisdslsqlpQQQTEARRQLNEIERR--- 159
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 502 VQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLhskltdtlvskqqleqrlmqlmESEQKRAS-KEESLQIQVQDILEQN 580
Cdd:PRK10929 160 LQTLGTPNTPLAQAQLTALQAESAALKALVDEL----------------------ELAQLSANnRQELARLRSELAKKRS 217
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 581 EALKAQIQQFHSQIAAQTSAsvlaeelhkviaEKDKQLKQTEdSLANEQDHL-ASKEEELKDVQNMNFLLKAEVQKLQAL 659
Cdd:PRK10929 218 QQLDAYLQALRNQLNSQRQR------------EAERALESTE-LLAEQSGDLpKSIVAQFKINRELSQALNQQAQRMDLI 284
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 660 ANEQAATAHEVEKMQKSIhvkeDKIR----------LLEEQLQHEVA------------SKMEELKILSEQNKALQSEVQ 717
Cdd:PRK10929 285 ASQQRQAASQTLQVRQAL----NTLReqsqwlgvsnALGEALRAQVArlpempkpqqldTEMAQLRVQRLRYEDLLNKQP 360
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 718 KLQTAvsQQPNKDVVEQMEKCIQekDEKLRTVEELLETGLIQVATREEELSAIRTENSTLT---REVQELKAK------Q 788
Cdd:PRK10929 361 QLRQI--RQADGQPLTAEQNRIL--DAQLRTQRELLNSLLSGGDTLILELTKLKVANSQLEdalKEVNEATHRylfwvaD 436
|
490 500
....*....|....*....|
gi 1907099785 789 SDQVSF---VSLIEDLKRVI 805
Cdd:PRK10929 437 VSPISLsypLEIAQDLRRLL 456
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
442-890 |
3.77e-05 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 47.84 E-value: 3.77e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 442 LESKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAATQLKVQLQEAERRWEEVQSYI-----RKRTAEHEAA 516
Cdd:COG4717 47 LLERLEKEADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEELEELEEELEELEAELeelreELEKLEKLLQ 126
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 517 QQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASKEESLQIQVQDI-LEQNEALKAQIQQFHSQIA 595
Cdd:COG4717 127 LLPLYQELEALEAELAELPERLEELEERLEELRELEEELEELEAELAELQEELEELLEQLsLATEEELQDLAEELEELQQ 206
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 596 AQTSASVLAEELHKVIAEKDKQLKQTEDSLANEQDhlaskEEELKDVQNMNFLLkAEVQKLQALANEQAATAHEVEKMQK 675
Cdd:COG4717 207 RLAELEEELEEAQEELEELEEELEQLENELEAAAL-----EERLKEARLLLLIA-AALLALLGLGGSLLSLILTIAGVLF 280
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 676 SIHVKEDKIRLLEEQLQHEVASKMEELKILSEQNKALQSEVQKLQTA--VSQQPNKDVVEQMEKCIQEKDEKLRTVEELL 753
Cdd:COG4717 281 LVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEELEELLAAlgLPPDLSPEELLELLDRIEELQELLREAEELE 360
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 754 ETglIQVATREEELSAIRTENSTLTREVQELKAKQSDQ-VSFVSLIEDLKRVIHEKDGQIKSVEELLEVEL--LKVANKE 830
Cdd:COG4717 361 EE--LQLEELEQEIAALLAEAGVEDEEELRAALEQAEEyQELKEELEELEEQLEELLGELEELLEALDEEEleEELEELE 438
|
410 420 430 440 450 460
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 831 KTVQALKQEIEVLKEEIGNAQlekaHQLSVTSQVQELQNLLRGKEEQVNSMKAALEDRDR 890
Cdd:COG4717 439 EELEELEEELEELREELAELE----AELEQLEEDGELAELLQELEELKAELRELAEEWAA 494
|
|
| PLN02939 |
PLN02939 |
transferase, transferring glycosyl groups |
470-813 |
4.16e-05 |
|
transferase, transferring glycosyl groups
Pssm-ID: 215507 [Multi-domain] Cd Length: 977 Bit Score: 47.97 E-value: 4.16e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 470 KLQQEGVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLhsKLTDTLVSKQQLE 549
Cdd:PLN02939 64 KLQSNTDENGQLENTSLRTVMELPQKSTSSDDDHNRASMQRDEAIAAIDNEQQTNSKDGEQLSDF--QLEDLVGMIQNAE 141
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 550 QRLMQLmesEQKRASKEEslqiQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQLKQTEDSL---- 625
Cdd:PLN02939 142 KNILLL---NQARLQALE----DLEKILTEKEALQGKINILEMRLSETDARIKLAAQEKIHVEILEEQLEKLRNELlirg 214
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 626 ANEQDHLASKEEELKDVQNMNFLLKAEVQKLQALANEQAATAHEVEKMQKSIHVKEDKIRLLEEQLqheVASKMEELKIL 705
Cdd:PLN02939 215 ATEGLCVHSLSKELDVLKEENMLLKDDIQFLKAELIEVAETEERVFKLEKERSLLDASLRELESKF---IVAQEDVSKLS 291
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 706 SEQNKALQSEVQKLQTAVSQQPNKdvVEQMEKCIQEKDEkLRTVEELLETGLIQVATREEELSAIRTENSTLTREVQELK 785
Cdd:PLN02939 292 PLQYDCWWEKVENLQDLLDRATNQ--VEKAALVLDQNQD-LRDKVDKLEASLKEANVSKFSSYKVELLQQKLKLLEERLQ 368
|
330 340
....*....|....*....|....*...
gi 1907099785 786 AKQSDQVSFVSLIEDLKRVIHEKDGQIK 813
Cdd:PLN02939 369 ASDHEIHSYIQLYQESIKEFQDTLSKLK 396
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
481-711 |
7.44e-05 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 46.68 E-value: 7.44e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 481 AEQAATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQskfvAKENEVQSLHSKLTDTLVSKQQLEQRLMQLmesEQ 560
Cdd:COG4942 18 QADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLA----ALERRIAALARRIRALEQELAALEAELAEL---EK 90
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 561 KRASKEESLQIQVQDILEQNEALKAQIQQ------FHSQIAAQTSASV-LAEELHKVIAEKDKQLKQTEDSLANEQDHLA 633
Cdd:COG4942 91 EIAELRAELEAQKEELAELLRALYRLGRQpplallLSPEDFLDAVRRLqYLKYLAPARREQAEELRADLAELAALRAELE 170
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907099785 634 SKEEELKDVQNMnflLKAEVQKLQALANEQAATAHEVEKMQKSIHVKEDKIRLLEEQLQHEVASKMEELKILSEQNKA 711
Cdd:COG4942 171 AERAELEALLAE---LEEERAALEALKAERQKLLARLEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| Golgin_A5 |
pfam09787 |
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining ... |
398-599 |
7.87e-05 |
|
Golgin subfamily A member 5; Members of this family of proteins are involved in maintaining Golgi structure. They stimulate the formation of Golgi stacks and ribbons, and are involved in intra-Golgi retrograde transport. Two main interactions have been characterized: one with RAB1A that has been activated by GTP-binding and another with isoform CASP of CUTL1.
Pssm-ID: 462900 [Multi-domain] Cd Length: 305 Bit Score: 46.29 E-value: 7.87e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 398 ASYQETQQMQMKFQQVQEQMEAEIAHLKQENGiLRDAVSNTTNQLESKQS--------AELNKLRQDCGRLVSELNEKTG 469
Cdd:pfam09787 4 SAKQELADYKQKAARILQSKEKLIASLKEGSG-VEGLDSSTALTLELEELrqerdllrEEIQKLRGQIQQLRTELQELEA 82
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 470 KLQQEGVQkknAEQAATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDL-------QSKFVAKENEVQSLHSKLTD-- 540
Cdd:pfam09787 83 QQQEEAES---SREQLQELEEQLATERSARREAEAELERLQEELRYLEEELrrskatlQSRIKDREAEIEKLRNQLTSks 159
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 541 -TLVSKQQLEQRLMQLMESEQKRASKEESLQIQVQDILEQNEALKAQIQQFHSQIAAQTS 599
Cdd:pfam09787 160 qSSSSQSELENRLHQLTETLIQKQTMLEALSTEKNSLVLQLERMEQQIKELQGEGSNGTS 219
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
432-791 |
1.23e-04 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 46.57 E-value: 1.23e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 432 RDAVSNTTNQLESKQSAELNKLrqdCGRLVSELNEKTGKLQQEGVQKKNAEQAATQLKVQLQEAERRWEEVQsyirkrta 511
Cdd:PRK02224 186 RGSLDQLKAQIEEKEEKDLHER---LNGLESELAELDEEIERYEEQREQARETRDEADEVLEEHEERREELE-------- 254
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 512 EHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASKEESLQIQVQDILEQNEAL-------K 584
Cdd:PRK02224 255 TLEAEIEDLRETIAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLDDADAEAVEARREELEDRDEELrdrleecR 334
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 585 AQIQQFHSQI-AAQTSASVL---AEELHKVIAEKDKQLKQTEDSLANEQDHLASKEEELKDvqNMNFLLKAEVQK----- 655
Cdd:PRK02224 335 VAAQAHNEEAeSLREDADDLeerAEELREEAAELESELEEAREAVEDRREEIEELEEEIEE--LRERFGDAPVDLgnaed 412
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 656 -LQALANEQAATAHEVEKMQKSIHVKEDKIR----LLEEQLQHEVASKMEELKILS------EQNKALQSEVQKLQTAVS 724
Cdd:PRK02224 413 fLEELREERDELREREAELEATLRTARERVEeaeaLLEAGKCPECGQPVEGSPHVEtieedrERVEELEAELEDLEEEVE 492
|
330 340 350 360 370 380 390
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907099785 725 QQPNK-----DVVEQmEKCIQEKDEKLRTVEELLETGLIQVATREEELSAIRTENSTLTREVQELKAKQSDQ 791
Cdd:PRK02224 493 EVEERleraeDLVEA-EDRIERLEERREDLEELIAERRETIEEKRERAEELRERAAELEAEAEEKREAAAEA 563
|
|
| MARTX_Nterm |
NF012221 |
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model ... |
414-655 |
1.46e-04 |
|
MARTX multifunctional-autoprocessing repeats-in-toxin holotoxin N-terminal region; This model describes the N-terminal 1900 amino acids of MARTX family multifunctional-autoprocessing repeats-in-toxin holotoxins, which contain both repeat regions that facilitate their entry into eukaryotic target cells, and multiple effector domains.
Pssm-ID: 467957 [Multi-domain] Cd Length: 1848 Bit Score: 46.37 E-value: 1.46e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 414 QEQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNK--------LRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAA 485
Cdd:NF012221 1564 KERAEADRQRLEQEKQQQLAAISGSQSQLESTDQNALETngqaqrdaILEESRAVTKELTTLAQGLDALDSQATYAGESG 1643
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 486 TQLKVQLqeAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKlTDTLVskQQLEQRLMQLMESEQKRASK 565
Cdd:NF012221 1644 DQWRNPF--AGGLLDRVQEQLDDAKKISGKQLADAKQRHVDNQQKVKDAVAK-SEAGV--AQGEQNQANAEQDIDDAKAD 1718
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 566 EESLQIQVqdILEQNEALKAQIQQFHS----QIAAQTSASVLAEELHKVIAEKdKQLKQTEDSLANEQ----DHLASKEE 637
Cdd:NF012221 1719 AEKRKDDA--LAKQNEAQQAESDANAAandaQSRGEQDASAAENKANQAQADA-KGAKQDESDKPNRQgaagSGLSGKAY 1795
|
250
....*....|....*...
gi 1907099785 638 ELKDVQNMNFLLKAEVQK 655
Cdd:NF012221 1796 SVEGVAEPGSHINPDSPA 1813
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
418-953 |
1.55e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 46.21 E-value: 1.55e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 418 EAEIAHLKQENGILRDAVSNTTNQLESKQ---SAELNKLRqdcgRLVSELNEKTGKLQQEGVQKKNAEQAATQLKVQLQE 494
Cdd:PRK03918 188 TENIEELIKEKEKELEEVLREINEISSELpelREELEKLE----KEVKELEELKEEIEELEKELESLEGSKRKLEEKIRE 263
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 495 AERRWEEVqsyiRKRTAEHEAAQQDLQS-KFVAKE-NEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASKEESLQIQ 572
Cdd:PRK03918 264 LEERIEEL----KKEIEELEEKVKELKElKEKAEEyIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIKELEEKEER 339
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 573 VQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKViaeKDKQLKQTEDSLANEQDHLASKEEELKDVQNMnflLKAE 652
Cdd:PRK03918 340 LEELKKKLKELEKRLEELEERHELYEEAKAKKEELERL---KKRLTGLTPEKLEKELEELEKAKEEIEEEISK---ITAR 413
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 653 VQKLQALANEQAATAHEVEKMQKSIHV------KEDKIRLLEEQLQhEVASKMEELKILSEQNKALQSEVQKLQTAVSQQ 726
Cdd:PRK03918 414 IGELKKEIKELKKAIEELKKAKGKCPVcgreltEEHRKELLEEYTA-ELKRIEKELKEIEEKERKLRKELRELEKVLKKE 492
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 727 PNKDVVEQMEKCIQEKDEKLRTVE-ELLETGLIQVATREEELSAIRTENSTLTREVQELKAKQSDQVSFVSLIEDLKRVI 805
Cdd:PRK03918 493 SELIKLKELAEQLKELEEKLKKYNlEELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKLAELEKKLDELEEEL 572
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 806 HEKDGQIKSV-------EELLEVELLKVANKEKTVQALKQEIEVLKEEIGNAQLEKAHQLsvtSQVQELQNLLRGKEEQV 878
Cdd:PRK03918 573 AELLKELEELgfesveeLEERLKELEPFYNEYLELKDAEKELEREEKELKKLEEELDKAF---EELAETEKRLEELRKEL 649
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907099785 879 NSMKAAL-EDRDRDLRGRgtcaqvcstpqFEELESVLKEKDNEIKRIEVKLKDTESDVSKMSELLKEVQEENKFLK 953
Cdd:PRK03918 650 EELEKKYsEEEYEELREE-----------YLELSRELAGLRAELEELEKRREEIKKTLEKLKEELEEREKAKKELE 714
|
|
| DUF3584 |
pfam12128 |
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. ... |
335-892 |
1.78e-04 |
|
Protein of unknown function (DUF3584); This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 943 to 1234 amino acids in length. This family contains a P-loop motif suggesting it is a nucleotide binding protein. It may be involved in replication.
Pssm-ID: 432349 [Multi-domain] Cd Length: 1191 Bit Score: 45.98 E-value: 1.78e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 335 QLQEKERLLSAMKEDAAASKERCKQLTQEMMTEKERSSVVIARMKDRIGTLEKEHNIFQNKMHASYQETQQMQMKFQQVQ 414
Cdd:pfam12128 277 RQEERQETSAELNQLLRTLDDQWKEKRDELNGELSAADAAVAKDRSELEALEDQHGAFLDADIETAAADQEQLPSWQSEL 356
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 415 EQMEAEIahlkqengilrDAVSNTTNQLESKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAATQ-----LK 489
Cdd:pfam12128 357 ENLEERL-----------KALTGKHQDVTAKYNRRRSKIKEQNNRDIAGIKDKLAKIREARDRQLAVAEDDLQaleseLR 425
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 490 VQLQEAERRWEEVQSYIRKRTAEHE------AAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLmesEQKRA 563
Cdd:pfam12128 426 EQLEAGKLEFNEEEYRLKSRLGELKlrlnqaTATPELLLQLENFDERIERAREEQEAANAEVERLQSELRQA---RKRRD 502
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 564 SKEESLQIQVQDILEQNEALKAQIQQF----HSQIA-AQTSASVLAEELHKVIAEkdKQLKQTEdsLANEQDhlaskEEE 638
Cdd:pfam12128 503 QASEALRQASRRLEERQSALDELELQLfpqaGTLLHfLRKEAPDWEQSIGKVISP--ELLHRTD--LDPEVW-----DGS 573
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 639 LKDVQNMnFLLKAEVQKLQA---LANEQAATAhEVEKMQKSIHVKEDKIRLLEEQLQHEVASKMEELKILSEQNKALQSE 715
Cdd:pfam12128 574 VGGELNL-YGVKLDLKRIDVpewAASEEELRE-RLDKAEEALQSAREKQAAAEEQLVQANGELEKASREETFARTALKNA 651
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 716 VQKLQ--TAVSQQPNKDVVEQMEKCIQEKDEKLRTVE---ELLETGLIQ-VATREEELSAIRTENSTLTREVQELKAKQS 789
Cdd:pfam12128 652 RLDLRrlFDEKQSEKDKKNKALAERKDSANERLNSLEaqlKQLDKKHQAwLEEQKEQKREARTEKQAYWQVVEGALDAQL 731
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 790 DQVSFVSLIEDLKRvihekDGQIKSVEELLEVELLKVANKEKTVQALKQEIEVLKEEIGNAQLEKAHQLSVTSQVQELQN 869
Cdd:pfam12128 732 ALLKAAIAARRSGA-----KAELKALETWYKRDLASLGVDPDVIAKLKREIRTLERKIERIAVRRQEVLRYFDWYQETWL 806
|
570 580
....*....|....*....|....
gi 1907099785 870 LLRGK-EEQVNSMKAALEDRDRDL 892
Cdd:pfam12128 807 QRRPRlATQLSNIERAISELQQQL 830
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
413-590 |
2.03e-04 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 45.78 E-value: 2.03e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 413 VQEQMEAEIAHLKQENGILRDAVSNTTNQLESKQsAELNKLRQDCGrlVSELNEKTGKLQQegvQKKNAEQAATQLKVQL 492
Cdd:COG3206 162 LEQNLELRREEARKALEFLEEQLPELRKELEEAE-AALEEFRQKNG--LVDLSEEAKLLLQ---QLSELESQLAEARAEL 235
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 493 QEAERRWEEVQSYI-------------------RKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLM 553
Cdd:COG3206 236 AEAEARLAALRAQLgsgpdalpellqspviqqlRAQLAELEAELAELSARYTPNHPDVIALRAQIAALRAQLQQEAQRIL 315
|
170 180 190
....*....|....*....|....*....|....*..
gi 1907099785 554 QLMESEQkraskeESLQIQVQDILEQNEALKAQIQQF 590
Cdd:COG3206 316 ASLEAEL------EALQAREASLQAQLAQLEARLAEL 346
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
771-1176 |
4.04e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 44.67 E-value: 4.04e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 771 RTENstLTREVQELKAKQSDQVSFVSLIEDLKRVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEVLKEEIGNA 850
Cdd:PRK03918 187 RTEN--IEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLEEKIREL 264
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 851 QlekahqlsvtSQVQELQNLLRGKEEQVNSMKAALEDRDRDLRGRGTCAQVCSTPQfeELESVLKEKDNEIKRIEVKLKD 930
Cdd:PRK03918 265 E----------ERIEELKKEIEELEEKVKELKELKEKAEEYIKLSEFYEEYLDELR--EIEKRLSRLEEEINGIEERIKE 332
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 931 TESDVSKMSELLKEVQE-ENKFLKCQLSHQKHQQASfPSQEELQTVISE-KEKEITDLCNELESLKNAVEHQRKKNNERR 1008
Cdd:PRK03918 333 LEEKEERLEELKKKLKElEKRLEELEERHELYEEAK-AKKEELERLKKRlTGLTPEKLEKELEELEKAKEEIEEEISKIT 411
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1009 QHVEAIELESKDLLKRLfptvsvpsnlnysEWLRGFEKKAKACVAGTSDAE----------AVKVLEHRLKEASEMHTLL 1078
Cdd:PRK03918 412 ARIGELKKEIKELKKAI-------------EELKKAKGKCPVCGRELTEEHrkelleeytaELKRIEKELKEIEEKERKL 478
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1079 QLECEKYKSVLAETEGILQKLQ-----RSVEQEESKWKI-KADESQRMIKQMQSSFTASERELERLRQENKDMENLRRER 1152
Cdd:PRK03918 479 RKELRELEKVLKKESELIKLKElaeqlKELEEKLKKYNLeELEKKAEEYEKLKEKLIKLKGEIKSLKKELEKLEELKKKL 558
|
410 420
....*....|....*....|....
gi 1907099785 1153 EHLEMELEKAEMERSTYVMEVREL 1176
Cdd:PRK03918 559 AELEKKLDELEEELAELLKELEEL 582
|
|
| COG5022 |
COG5022 |
Myosin heavy chain [General function prediction only]; |
526-1165 |
4.18e-04 |
|
Myosin heavy chain [General function prediction only];
Pssm-ID: 227355 [Multi-domain] Cd Length: 1463 Bit Score: 45.07 E-value: 4.18e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 526 AKENEVQSLHSKLTDTLVSKQQLEQRLMqlMESEQKRASKEESLQIQVQDILEQNEALKAQIQQ---------FHSQIAA 596
Cdd:COG5022 814 SYLACIIKLQKTIKREKKLRETEEVEFS--LKAEVLIQKFGRSLKAKKRFSLLKKETIYLQSAQrvelaerqlQELKIDV 891
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 597 QTSASV--LAEELHKVIAEKDKQLKQTE--------DSLANEQDHLasKEEELKDVQNMNFLLKAEVQKLQALANEQAAT 666
Cdd:COG5022 892 KSISSLklVNLELESEIIELKKSLSSDLienlefktELIARLKKLL--NNIDLEEGPSIEYVKLPELNKLHEVESKLKET 969
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 667 AHEVEKM--QKSIHVKEDKIRLLE-EQLQHEVASKMEELKILSEQNKAL---QSEVQKLQTAVSQQPNKDVVEQMEKCIQ 740
Cdd:COG5022 970 SEEYEDLlkKSTILVREGNKANSElKNFKKELAELSKQYGALQESTKQLkelPVEVAELQSASKIISSESTELSILKPLQ 1049
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 741 EKDEKLRTVEELLETGLIQVATREEELSAIRTENSTLtrEVQELKAKqsdqvSFVSLIEDLKRVIHEKDgqiKSVEELLE 820
Cdd:COG5022 1050 KLKGLLLLENNQLQARYKALKLRRENSLLDDKQLYQL--ESTENLLK-----TINVKDLEVTNRNLVKP---ANVLQFIV 1119
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 821 VELLKVANKEKTVQALKQEIEVLKEEIGNAQlEKAHQLSVTSQVQELQNLLRGKEEQVNSMKAALEDRDRDLRGRGTCAQ 900
Cdd:COG5022 1120 AQMIKLNLLQEISKFLSQLVNTLEPVFQKLS-VLQLELDGLFWEANLEALPSPPPFAALSEKRLYQSALYDEKSKLSSSE 1198
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 901 VcsTPQFEELESVLKeKDNEIKRIEVKLKDTESDVSKMSELLKEVQEEN---KFLKCQLSHQKHQQASFPSQeeLQTVIS 977
Cdd:COG5022 1199 V--NDLKNELIALFS-KIFSGWPRGDKLKKLISEGWVPTEYSTSLKGFNnlnKKFDTPASMSNEKLLSLLNS--IDNLLS 1273
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 978 EKEKEitdlcnelESLKNAVEHQRKKNNERRQHVEAIELESKDLLKRLfptvsvpSNLNY-SEWLRGFEKKAKACVAGTS 1056
Cdd:COG5022 1274 SYKLE--------EEVLPATINSLLQYINVGLFNALRTKASSLRWKSA-------TEVNYnSEELDDWCREFEISDVDEE 1338
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1057 ---DAEAVKVLEHRLKEASEMHTLLQLeceKYKSVLAETEGILQKLQRSVEQEESKWKIKADESQRMIKQMQSSFTASER 1133
Cdd:COG5022 1339 leeLIQAVKVLQLLKDDLNKLDELLDA---CYSLNPAEIQNLKSRYDPADKENNLPKEILKKIEALLIKQELQLSLEGKD 1415
|
650 660 670
....*....|....*....|....*....|....
gi 1907099785 1134 ELERLRQENKDMEN--LRREREHLEMELEKAEME 1165
Cdd:COG5022 1416 ETEVHLSEIFSEEKslISLDRNSIYKEEVLSSLS 1449
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
414-887 |
4.81e-04 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 44.52 E-value: 4.81e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 414 QEQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDCGRLVSELNEKTGKLQQE-------GVQKKNAEQAAT 486
Cdd:COG4913 304 LARLEAELERLEARLDALREELDELEAQIRGNGGDRLEQLEREIERLERELEERERRRARLeallaalGLPLPASAEEFA 383
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 487 QLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKltDTLVSKQQLEQR--------------- 551
Cdd:COG4913 384 ALRAEAAALLEALEEELEALEEALAEAEAALRDLRRELRELEAEIASLERR--KSNIPARLLALRdalaealgldeaelp 461
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 552 ----LMQLMESEQK-RASKE-------------ESLQIQVQDILEQNeALKAQIQQFHsqiAAQTSASVLAEELHkviae 613
Cdd:COG4913 462 fvgeLIEVRPEEERwRGAIErvlggfaltllvpPEHYAAALRWVNRL-HLRGRLVYER---VRTGLPDPERPRLD----- 532
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 614 kdkqlkqtEDSLANEqdhLASKEEELKDvqnmnfLLKAEVQKLQALAneQAATAHEVEKMQKSI------------HVKE 681
Cdd:COG4913 533 --------PDSLAGK---LDFKPHPFRA------WLEAELGRRFDYV--CVDSPEELRRHPRAItragqvkgngtrHEKD 593
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 682 DKIRLLEE-QLQHEVASKmeeLKILSEQNKALQSEVQKLQTAVSQqpnkdvVEQMEKCIQEKDEKLRTVEELLETGL--- 757
Cdd:COG4913 594 DRRRIRSRyVLGFDNRAK---LAALEAELAELEEELAEAEERLEA------LEAELDALQERREALQRLAEYSWDEIdva 664
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 758 ---IQVATREEELSAIRTENSTLTREVQELKAKQSDQVSFVSLIEDLKRVIHEKDGQIKSVEELLEVELLKVANKEKTV- 833
Cdd:COG4913 665 saeREIAELEAELERLDASSDDLAALEEQLEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAEDLAr 744
|
490 500 510 520 530
....*....|....*....|....*....|....*....|....*....|....*
gi 1907099785 834 QALKQEIEVLKEEIGNAQLEKAHQLSVTSQVQELQNLLRGKEEQ-VNSMKAALED 887
Cdd:COG4913 745 LELRALLEERFAAALGDAVERELRENLEERIDALRARLNRAEEElERAMRAFNRE 799
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
525-1197 |
4.86e-04 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 44.33 E-value: 4.86e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 525 VAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASKEESLQIQVQDILEQNEALKaqiqqfHSQIAAQTSASVLA 604
Cdd:pfam05483 95 VSIEAELKQKENKLQENRKIIEAQRKAIQELQFENEKVSLKLEEEIQENKDLIKENNATR------HLCNLLKETCARSA 168
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 605 EELHKVIAEKDKQLKQTEDSLANEQDHLASKEEELKDVQN----MNFLLKAEVQKLQalaneqaataHEVEKMQKSIHVK 680
Cdd:pfam05483 169 EKTKKYEYEREETRQVYMDLNNNIEKMILAFEELRVQAENarleMHFKLKEDHEKIQ----------HLEEEYKKEINDK 238
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 681 EDKIRLLEEQLQhEVASKMEELKILSEQNKALQSEVQKlQTAVSQQPNKDVVEQMEKCIQEKDEKLRTVEELLETGL--- 757
Cdd:pfam05483 239 EKQVSLLLIQIT-EKENKMKDLTFLLEESRDKANQLEE-KTKLQDENLKELIEKKDHLTKELEDIKMSLQRSMSTQKale 316
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 758 --IQVATREeeLSAIRTENSTLTREVQELKAKQSDQVS----FVSLIEDLKRVIHEKDGQIKSVEELLEVELLKVANKEK 831
Cdd:pfam05483 317 edLQIATKT--ICQLTEEKEAQMEELNKAKAAHSFVVTefeaTTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELE 394
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 832 TVQALKQEIEVLKEEIGNAQLEKAHQLSVTSQVQELQNLLRGKEEQVNSMKAALEDRDRDLRGRGTCAQVCSTPQFEELE 911
Cdd:pfam05483 395 EMTKFKNNKEVELEELKKILAEDEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVE 474
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 912 SVLKEKDNEikrievKLKDTE--SDVSKMSELLKEVQEENKFLKCQLSHQKHQQASFPSQEE--LQTVISEKEKEiTDLC 987
Cdd:pfam05483 475 DLKTELEKE------KLKNIEltAHCDKLLLENKELTQEASDMTLELKKHQEDIINCKKQEErmLKQIENLEEKE-MNLR 547
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 988 NELESLKNAVEHQRK----KNNERRQHVEAIELESKDLLKRLFPTVSVPSNL-----NYSEWLRGFEKKAKAC-VAGTSD 1057
Cdd:pfam05483 548 DELESVREEFIQKGDevkcKLDKSEENARSIEYEVLKKEKQMKILENKCNNLkkqieNKNKNIEELHQENKALkKKGSAE 627
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1058 AEAVKVLEHRLKEasemhtlLQLECEKYKSVLAETEGILQK-------LQRSVEQEESKWKIKADESQRMIKQMQSSFTA 1130
Cdd:pfam05483 628 NKQLNAYEIKVNK-------LELELASAKQKFEEIIDNYQKeiedkkiSEEKLLEEVEKAKAIADEAVKLQKEIDKRCQH 700
|
650 660 670 680 690 700 710
....*....|....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907099785 1131 SERELERLRQENKDMENLRREREHLEMELEKAEME-----RSTYVMEVRELKTQLNETHSKLQNEQTERKKV 1197
Cdd:pfam05483 701 KIAEMVALMEKHKHQYDKIIEERDSELGLYKNKEQeqssaKAALEIELSNIKAELLSLKKQLEIEKEEKEKL 772
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
525-745 |
6.69e-04 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 43.60 E-value: 6.69e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 525 VAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASKEESLQIQVQDILEQNEALKAQIQQFHSQIAA-QTSASVL 603
Cdd:COG4942 16 AAQADAAAEAEAELEQLQQEIAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAElEKEIAEL 95
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 604 AEELHKVIAEKDKQLKQTEDSLANEQDHLASKEEELKDVQNMNFLLKAEVQKLQALANEQAATAHEVEKMQKSIHVKEDK 683
Cdd:COG4942 96 RAELEAQKEELAELLRALYRLGRQPPLALLLSPEDFLDAVRRLQYLKYLAPARREQAEELRADLAELAALRAELEAERAE 175
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907099785 684 IRLLE-------EQLQHEVASKMEELKILSEQNKALQSEVQKLQTavSQQPNKDVVEQMEKCIQEKDEK 745
Cdd:COG4942 176 LEALLaeleeerAALEALKAERQKLLARLEKELAELAAELAELQQ--EAEELEALIARLEAEAAAAAER 242
|
|
| PLN03229 |
PLN03229 |
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional |
556-857 |
7.92e-04 |
|
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Provisional
Pssm-ID: 178768 [Multi-domain] Cd Length: 762 Bit Score: 43.69 E-value: 7.92e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 556 MESEQKR-ASKEESLQIQVQDILEQNEALKAQIQQfHSQIAAQTSASVLAEELHKVIAEKDKQLKQTEDSLANEQDHLAS 634
Cdd:PLN03229 413 VDPERKVnMKKREAVKTPVRELEGEVEKLKEQILK-AKESSSKPSELALNEMIEKLKKEIDLEYTEAVIAMGLQERLENL 491
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 635 KEEELK---DVQNMNFLLKAEVQKLQALANEQAATA-------HEVEKMQ-----KSIHVKEDKIRLLEEQLQHEVASKM 699
Cdd:PLN03229 492 REEFSKansQDQLMHPVLMEKIEKLKDEFNKRLSRApnylslkYKLDMLNefsraKALSEKKSKAEKLKAEINKKFKEVM 571
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 700 EELKIlSEQNKALQSEVQKLQTAVSQQPNKDVVEQMEKCIQEKDEKLRTVEELLETGLIQVATREEELSAiRTENSTLTR 779
Cdd:PLN03229 572 DRPEI-KEKMEALKAEVASSGASSGDELDDDLKEKVEKMKKEIELELAGVLKSMGLEVIGVTKKNKDTAE-QTPPPNLQE 649
|
250 260 270 280 290 300 310
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907099785 780 EVQELKAKQSDQVSFVSLIEDLKRVIHEKDGQIksveeLLEVELLKVANKEKtVQALKQEI-EVLKEEIGNAQLEKAHQ 857
Cdd:PLN03229 650 KIESLNEEINKKIERVIRSSDLKSKIELLKLEV-----AKASKTPDVTEKEK-IEALEQQIkQKIAEALNSSELKEKFE 722
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
536-1024 |
9.52e-04 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.51 E-value: 9.52e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 536 SKLTDTLVSKQQLEQRLMQLMESEQKRASKEESLQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKD 615
Cdd:PRK03918 179 ERLEKFIKRTENIEELIKEKEKELEEVLREINEISSELPELREELEKLEKEVKELEELKEEIEELEKELESLEGSKRKLE 258
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 616 KQLKQTEDSLANEQDHLASKEEELKDVQNmnflLKAEVQKLQALANEQAATAHEVEKMQKSIHVKEDKIRLLEEQLQhEV 695
Cdd:PRK03918 259 EKIRELEERIEELKKEIEELEEKVKELKE----LKEKAEEYIKLSEFYEEYLDELREIEKRLSRLEEEINGIEERIK-EL 333
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 696 ASKMEELKILSEQNKALQSEVQKLQTAVSQ-QPNKDVVEQMEKCiqEKDEKLRTVEElLETGLIQVATREEElsaIRTEN 774
Cdd:PRK03918 334 EEKEERLEELKKKLKELEKRLEELEERHELyEEAKAKKEELERL--KKRLTGLTPEK-LEKELEELEKAKEE---IEEEI 407
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 775 STLTREVQELKAKQSDQVSFVSLIEDLKRVI---------HEKDGQIKSveellevELLKVANKEKTVQALKQEIEVLKE 845
Cdd:PRK03918 408 SKITARIGELKKEIKELKKAIEELKKAKGKCpvcgrelteEHRKELLEE-------YTAELKRIEKELKEIEEKERKLRK 480
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 846 EIGNAQLEKAHQLSVTSQvQELQNLLRGKEEQVNSMKaaLEDRDRDLRgrgtcaqvcstpQFEELESVLKEKDNEIKRIE 925
Cdd:PRK03918 481 ELRELEKVLKKESELIKL-KELAEQLKELEEKLKKYN--LEELEKKAE------------EYEKLKEKLIKLKGEIKSLK 545
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 926 VKLKDTESDVSKMSELLKEVQEENKFLKcqLSHQKHQQASFPSQEELQTVISEKE-------------KEITDLCNELES 992
Cdd:PRK03918 546 KELEKLEELKKKLAELEKKLDELEEELA--ELLKELEELGFESVEELEERLKELEpfyneylelkdaeKELEREEKELKK 623
|
490 500 510
....*....|....*....|....*....|..
gi 1907099785 993 LKNAVEHQRKKNNERRQHVEAIELESKDLLKR 1024
Cdd:PRK03918 624 LEEELDKAFEELAETEKRLEELRKELEELEKK 655
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
681-1204 |
1.07e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 43.49 E-value: 1.07e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 681 EDKIRLLEEQLQHEVASKME-ELKILSEQNKALqsEVQKLQTAVSQQPNKDVVEQMEKCIQEKDEKLRTVEELLETgliq 759
Cdd:PRK02224 193 KAQIEEKEEKDLHERLNGLEsELAELDEEIERY--EEQREQARETRDEADEVLEEHEERREELETLEAEIEDLRET---- 266
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 760 VATREEELSAIRTENSTLTREVQELKAKQSDQVSFVSL----IEDLKRVIHEKDGQIKSVEELLEVELLKVANKEKTVQA 835
Cdd:PRK02224 267 IAETEREREELAEEVRDLRERLEELEEERDDLLAEAGLddadAEAVEARREELEDRDEELRDRLEECRVAAQAHNEEAES 346
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 836 LKQEIEVLKEEIGNAQlEKAHQLSvtSQVQELQNLLRGKEEQVnsmkAALEDRDRDLRGRGTCAQVcstpQFEELESVLK 915
Cdd:PRK02224 347 LREDADDLEERAEELR-EEAAELE--SELEEAREAVEDRREEI----EELEEEIEELRERFGDAPV----DLGNAEDFLE 415
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 916 EKDNEIKRIEVKLKDTESDVSKMSELLKEVQEENKFLKCQLSHQKHQQASFPSqeelqtVISEKEKEITDLCNELESLKN 995
Cdd:PRK02224 416 ELREERDELREREAELEATLRTARERVEEAEALLEAGKCPECGQPVEGSPHVE------TIEEDRERVEELEAELEDLEE 489
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 996 AVEHQRKKNNERRQHVEAielesKDLLKRLFPTVSVPSNLNYSEWLRGFEKKAKAcvagTSDAEAVKVLEHRLKEASEMH 1075
Cdd:PRK02224 490 EVEEVEERLERAEDLVEA-----EDRIERLEERREDLEELIAERRETIEEKRERA----EELRERAAELEAEAEEKREAA 560
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1076 TLLQLECEKYKSVLAETEGILQKLQRSVEQEESkwkikadesqrmIKQMQSSFTASERELERLRQENKD---MENLRRER 1152
Cdd:PRK02224 561 AEAEEEAEEAREEVAELNSKLAELKERIESLER------------IRTLLAAIADAEDEIERLREKREAlaeLNDERRER 628
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1153 --------EHLEMELEKAEMErstyvmEVRELKTQLNETHSKLQNEQTERKKVADDLHKA 1204
Cdd:PRK02224 629 laekrerkRELEAEFDEARIE------EAREDKERAEEYLEQVEEKLDELREERDDLQAE 682
|
|
| SMC_prok_A |
TIGR02169 |
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ... |
310-639 |
1.12e-03 |
|
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain] Cd Length: 1164 Bit Score: 43.52 E-value: 1.12e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 310 LKEKSGVI---------KEALKKSNKGELSGLLHQLQEKERLLSAMKEDAAASKERCKQLTQEMMTEKERssvvIARMKD 380
Cdd:TIGR02169 648 LFEKSGAMtggsraprgGILFSRSEPAELQRLRERLEGLKRELSSLQSELRRIENRLDELSQELSDASRK----IGEIEK 723
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 381 RIGTLEKEHNIFQNKMHASYQETQQMQMKFQQVQ----------EQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAEL 450
Cdd:TIGR02169 724 EIEQLEQEEEKLKERLEELEEDLSSLEQEIENVKselkeleariEELEEDLHKLEEALNDLEARLSHSRIPEIQAELSKL 803
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 451 NKLRQDCGRLVSELNEKTGKLQQEG------------------VQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAE 512
Cdd:TIGR02169 804 EEEVSRIEARLREIEQKLNRLTLEKeylekeiqelqeqridlkEQIKSIEKEIENLNGKKEELEEELEELEAALRDLESR 883
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 513 HEaaqqDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASKEESLQIQVQDILEQNEA------LKAQ 586
Cdd:TIGR02169 884 LG----DLKKERDELEAQLRELERKIEELEAQIEKKRKRLSELKAKLEALEEELSEIEDPKGEDEEIPEEelsledVQAE 959
|
330 340 350 360 370
....*....|....*....|....*....|....*....|....*....|...
gi 1907099785 587 IQQFHSQIAAQTSASVLAEELHKVIAEKDKQLKQTEDSLANEQDHLASKEEEL 639
Cdd:TIGR02169 960 LQRVEEEIRALEPVNMLAIQEYEEVLKRLDELKEKRAKLEEERKAILERIEEY 1012
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
462-667 |
1.13e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 42.89 E-value: 1.13e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 462 SELNEKTGKLQQEGVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAEHEAAQQDLQskfvAKENEVQSLHSKLTDT 541
Cdd:COG3883 16 PQIQAKQKELSELQAELEAAQAELDALQAELEELNEEYNELQAELEALQAEIDKLQAEIA----EAEAEIEERREELGER 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 542 LVSKQQ---LEQRLMQLMESEQ-----KRASKEESLQIQVQDILEQNEALKAQIQQFHSQI--------AAQTSASVLAE 605
Cdd:COG3883 92 ARALYRsggSVSYLDVLLGSESfsdflDRLSALSKIADADADLLEELKADKAELEAKKAELeaklaeleALKAELEAAKA 171
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|..
gi 1907099785 606 ELHKVIAEKDKQLKQTEDSLANEQDHLASKEEELKDVQNMNFLLKAEVQKLQALANEQAATA 667
Cdd:COG3883 172 ELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAA 233
|
|
| PRK03918 |
PRK03918 |
DNA double-strand break repair ATPase Rad50; |
907-1205 |
1.15e-03 |
|
DNA double-strand break repair ATPase Rad50;
Pssm-ID: 235175 [Multi-domain] Cd Length: 880 Bit Score: 43.51 E-value: 1.15e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 907 FEELESVLKEKDNEIKRIEVKLKDTESDVSKMSELLKEVQEENKFLKcqlshqkhqqasfpSQEELQTVISEKEKEITDL 986
Cdd:PRK03918 164 YKNLGEVIKEIKRRIERLEKFIKRTENIEELIKEKEKELEEVLREIN--------------EISSELPELREELEKLEKE 229
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 987 CNELESLKNAVEHQRKKNNERRQHVEAIELESKDLLKRLFPTVsvpsnlnysEWLRGFEKKAKACVAGTSDAEAVKVLEH 1066
Cdd:PRK03918 230 VKELEELKEEIEELEKELESLEGSKRKLEEKIRELEERIEELK---------KEIEELEEKVKELKELKEKAEEYIKLSE 300
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1067 RLKEASEMHTLLQLECEKYKSVLAETEGILQKLQrsvEQEESKWKIKADESQrmIKQMQSSFTASERELERLRQENKDME 1146
Cdd:PRK03918 301 FYEEYLDELREIEKRLSRLEEEINGIEERIKELE---EKEERLEELKKKLKE--LEKRLEELEERHELYEEAKAKKEELE 375
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907099785 1147 NLRRER-----EHLEMELEKAEMERSTYVMEVRELKTQLNEthskLQNEQTERKKVADDLHKAQ 1205
Cdd:PRK03918 376 RLKKRLtgltpEKLEKELEELEKAKEEIEEEISKITARIGE----LKKEIKELKKAIEELKKAK 435
|
|
| GumC |
COG3206 |
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis]; |
415-599 |
1.32e-03 |
|
Exopolysaccharide export protein/domain GumC/Wzc1 [Cell wall/membrane/envelope biogenesis];
Pssm-ID: 442439 [Multi-domain] Cd Length: 687 Bit Score: 43.08 E-value: 1.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 415 EQMEAEIAHLKQENGILrdAVSNTTNQLESKQS---AELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAAT--QLK 489
Cdd:COG3206 192 EEAEAALEEFRQKNGLV--DLSEEAKLLLQQLSeleSQLAEARAELAEAEARLAALRAQLGSGPDALPELLQSPViqQLR 269
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 490 VQLQEAERRWEE-----------VQSYIRKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMES 558
Cdd:COG3206 270 AQLAELEAELAElsarytpnhpdVIALRAQIAALRAQLQQEAQRILASLEAELEALQAREASLQAQLAQLEARLAELPEL 349
|
170 180 190 200
....*....|....*....|....*....|....*....|.
gi 1907099785 559 EQKRASKEESLQIQvQDILEQneaLKAQIQQFHSQIAAQTS 599
Cdd:COG3206 350 EAELRRLEREVEVA-RELYES---LLQRLEEARLAEALTVG 386
|
|
| PRK02224 |
PRK02224 |
DNA double-strand break repair Rad50 ATPase; |
552-1190 |
1.34e-03 |
|
DNA double-strand break repair Rad50 ATPase;
Pssm-ID: 179385 [Multi-domain] Cd Length: 880 Bit Score: 43.11 E-value: 1.34e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 552 LMQL--MESEQKRASKE----ESLQIQVQDILEQneaLKAQIQQ-----FHSQIAAQTSAsvlAEELHKVIAEKDKQLKQ 620
Cdd:PRK02224 158 LLQLgkLEEYRERASDArlgvERVLSDQRGSLDQ---LKAQIEEkeekdLHERLNGLESE---LAELDEEIERYEEQREQ 231
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 621 TEDSLANEQDHLASKEEELKDVQNmnflLKAEVQKLQAlanEQAATAHEVEKMQKSIHVKEDKIRLLEEQLQHEVA-SKM 699
Cdd:PRK02224 232 ARETRDEADEVLEEHEERREELET----LEAEIEDLRE---TIAETEREREELAEEVRDLRERLEELEEERDDLLAeAGL 304
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 700 EELKI---------LSEQNKALQSEVQKLQTAVSQQPN-----KDVVEQMEKCIQEKDEKLRTVEELLETGLIQVATREE 765
Cdd:PRK02224 305 DDADAeavearreeLEDRDEELRDRLEECRVAAQAHNEeaeslREDADDLEERAEELREEAAELESELEEAREAVEDRRE 384
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 766 ELSAIRTENSTLTREVQELKAKQSDQVSFVSLIEDLKRVIHEKdgqIKSVEELLEVELLKVANKEKTVQALK-----QEI 840
Cdd:PRK02224 385 EIEELEEEIEELRERFGDAPVDLGNAEDFLEELREERDELRER---EAELEATLRTARERVEEAEALLEAGKcpecgQPV 461
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 841 EvlKEEIGNAQLEKahqlsvTSQVQELQNLLRGKEEQVNSMKAALEdRDRDLRgrgtcaqvcstPQFEELESVLKEKDNE 920
Cdd:PRK02224 462 E--GSPHVETIEED------RERVEELEAELEDLEEEVEEVEERLE-RAEDLV-----------EAEDRIERLEERREDL 521
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 921 IKRIEVKLKDTESDVSKMSELLKEVQEENKflKCQLSHQKHQQASFPSQEELQTViSEKEKEITDLCNELESLKNAVE-- 998
Cdd:PRK02224 522 EELIAERRETIEEKRERAEELRERAAELEA--EAEEKREAAAEAEEEAEEAREEV-AELNSKLAELKERIESLERIRTll 598
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 999 -------HQRKKNNERRQHVEAIELESKDllkrlfptvsvpsnlnysewlrgfekkakacvagtsdaeavkvlehRLKEA 1071
Cdd:PRK02224 599 aaiadaeDEIERLREKREALAELNDERRE----------------------------------------------RLAEK 632
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1072 SEMHTLLQLECEKyksvlAETEGILQKLQRSVE-QEESKWKIKADESQRmiKQMQSSFTASERELERLRQENKDMENLRR 1150
Cdd:PRK02224 633 RERKRELEAEFDE-----ARIEEAREDKERAEEyLEQVEEKLDELREER--DDLQAEIGAVENELEELEELRERREALEN 705
|
650 660 670 680
....*....|....*....|....*....|....*....|.
gi 1907099785 1151 EREHLEMELEKAEMERSTYvMEVR-ELKTQLNETHSKLQNE 1190
Cdd:PRK02224 706 RVEALEALYDEAEELESMY-GDLRaELRQRNVETLERMLNE 745
|
|
| CCDC158 |
pfam15921 |
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. ... |
323-528 |
1.38e-03 |
|
Coiled-coil domain-containing protein 158; CCDC158 is a family of proteins found in eukaryotes. The function is not known.
Pssm-ID: 464943 [Multi-domain] Cd Length: 1112 Bit Score: 43.18 E-value: 1.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 323 KSNKGELSGLLHQLQEKERLLSAMKEDAAASKERCKQLTQEMMTEKERSSVviaRMKDRIGTLEKEHNIFQNkMHASYQE 402
Cdd:pfam15921 649 KDIKQERDQLLNEVKTSRNELNSLSEDYEVLKRNFRNKSEEMETTTNKLKM---QLKSAQSELEQTRNTLKS-MEGSDGH 724
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 403 TQQMQMKFQQVQEQMEAEIAHLKQENGILRDAVSNTtNQLESKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAE 482
Cdd:pfam15921 725 AMKVAMGMQKQITAKRGQIDALQSKIQFLEEAMTNA-NKEKHFLKEEKNKLSQELSTVATEKNKMAGELEVLRSQERRLK 803
|
170 180 190 200
....*....|....*....|....*....|....*....|....*.
gi 1907099785 483 QAATQLKVQLQEAERRWEEVQSYIRKRtaEHEAAQQDLQSKFVAKE 528
Cdd:pfam15921 804 EKVANMEVALDKASLQFAECQDIIQRQ--EQESVRLKLQHTLDVKE 847
|
|
| PRK05771 |
PRK05771 |
V-type ATP synthase subunit I; Validated |
909-1164 |
1.47e-03 |
|
V-type ATP synthase subunit I; Validated
Pssm-ID: 235600 [Multi-domain] Cd Length: 646 Bit Score: 42.99 E-value: 1.47e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 909 ELESVLKEKDNEikRIEVKLKDTeSDVSKMSELLKEVQEENKFLKCQLSHQKHQqasfpSQEELQTVISEK----EKEIT 984
Cdd:PRK05771 32 HIEDLKEELSNE--RLRKLRSLL-TKLSEALDKLRSYLPKLNPLREEKKKVSVK-----SLEELIKDVEEElekiEKEIK 103
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 985 DLCNELESLKNAVEhqrkknnERRQHVEAIE-LESKDLLkrlfptvsvPSNLNYSEWLRGFEKKAKACVAGTSDAEAVKV 1063
Cdd:PRK05771 104 ELEEEISELENEIK-------ELEQEIERLEpWGNFDLD---------LSLLLGFKYVSVFVGTVPEDKLEELKLESDVE 167
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1064 LEHRLKEASEMHTLLQLeceKYKSVLAETEGILQKLqrSVEQEESKWKIKADESQRMIKQMQSSFtasERELERLRQE-- 1141
Cdd:PRK05771 168 NVEYISTDKGYVYVVVV---VLKELSDEVEEELKKL--GFERLELEEEGTPSELIREIKEELEEI---EKERESLLEElk 239
|
250 260
....*....|....*....|....*.
gi 1907099785 1142 ---NKDMENLRREREHLEMELEKAEM 1164
Cdd:PRK05771 240 elaKKYLEELLALYEYLEIELERAEA 265
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
798-1003 |
1.77e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 42.06 E-value: 1.77e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 798 IEDLKRVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEVLKEEIGNAQLEKAH-QLSVTSQVQELQNLLRG--K 874
Cdd:COG4942 36 IAELEKELAALKKEEKALLKQLAALERRIAALARRIRALEQELAALEAELAELEKEIAElRAELEAQKEELAELLRAlyR 115
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 875 EEQVNSMKAAL--EDRDRDLRGRGTCAQVcstpqFEELESVLKEKDNEIKRIEVKLKDTESDVSKMSELLKEVQEENKFL 952
Cdd:COG4942 116 LGRQPPLALLLspEDFLDAVRRLQYLKYL-----APARREQAEELRADLAELAALRAELEAERAELEALLAELEEERAAL 190
|
170 180 190 200 210
....*....|....*....|....*....|....*....|....*....|..
gi 1907099785 953 KCQLSHQKHQQASFPSQE-ELQTVISEKEKEITDLCNELESLKNAVEHQRKK 1003
Cdd:COG4942 191 EALKAERQKLLARLEKELaELAAELAELQQEAEELEALIARLEAEAAAAAER 242
|
|
| YhaN |
COG4717 |
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown]; |
576-1024 |
1.88e-03 |
|
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain] Cd Length: 641 Bit Score: 42.45 E-value: 1.88e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 576 ILEQNEALKAQIQQFHSQIaaqtsasvLAEELHKviaEKDKQLKQTEDSLANEQDHLASKEEELKDVQNMNFLLKAEVQK 655
Cdd:COG4717 28 IYGPNEAGKSTLLAFIRAM--------LLERLEK---EADELFKPQGRKPELNLKELKELEEELKEAEEKEEEYAELQEE 96
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 656 LQALANEQAATAHEVEKMQKSIHVKEDKIRLLE-----EQLQHEVASKMEELKILSEQNKALQSEVQKLQTAVSQ--QPN 728
Cdd:COG4717 97 LEELEEELEELEAELEELREELEKLEKLLQLLPlyqelEALEAELAELPERLEELEERLEELRELEEELEELEAElaELQ 176
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 729 KDVVEQMEKCIQEKDEKLRTVEELLETGLIQVATREEELSAIRTENSTLTREVQELKAKQSDQ----------------- 791
Cdd:COG4717 177 EELEELLEQLSLATEEELQDLAEELEELQQRLAELEEELEEAQEELEELEEELEQLENELEAAaleerlkearlllliaa 256
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 792 --VSFVSLIEDLKRVIHEKDGQIKSVEELLEVELLKVANKEKTVQALKQEIEVLKEEIGNAQLE-----KAHQLSVTSQV 864
Cdd:COG4717 257 alLALLGLGGSLLSLILTIAGVLFLVLGLLALLFLLLAREKASLGKEAEELQALPALEELEEEEleellAALGLPPDLSP 336
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 865 QELQNLLRgKEEQVNSMKAALEDRDRDLRgrgtcAQVCSTPQFEELESVLKEKDNEIKRIEVKLKDTESDVSKMSELLKE 944
Cdd:COG4717 337 EELLELLD-RIEELQELLREAEELEEELQ-----LEELEQEIAALLAEAGVEDEEELRAALEQAEEYQELKEELEELEEQ 410
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 945 VQEENKFLKCQLSHQKHQQASfPSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNN--ERRQHVEAIELESKDLL 1022
Cdd:COG4717 411 LEELLGELEELLEALDEEELE-EELEELEEELEELEEELEELREELAELEAELEQLEEDGElaELLQELEELKAELRELA 489
|
..
gi 1907099785 1023 KR 1024
Cdd:COG4717 490 EE 491
|
|
| SCP-1 |
pfam05483 |
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major ... |
293-782 |
3.17e-03 |
|
Synaptonemal complex protein 1 (SCP-1); Synaptonemal complex protein 1 (SCP-1) is the major component of the transverse filaments of the synaptonemal complex. Synaptonemal complexes are structures that are formed between homologous chromosomes during meiotic prophase.
Pssm-ID: 114219 [Multi-domain] Cd Length: 787 Bit Score: 42.02 E-value: 3.17e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 293 LKTMMFSEDEALCVVDLLKEKSGVIKEALKKSNK------GELSGLLHQLQEKERLLSAMKEDAAASKERCKQLTQEMMT 366
Cdd:pfam05483 256 MKDLTFLLEESRDKANQLEEKTKLQDENLKELIEkkdhltKELEDIKMSLQRSMSTQKALEEDLQIATKTICQLTEEKEA 335
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 367 EKERS-------SVVIARMKDRIGTLEKEHNIFQNKMHASYQETQQMQMKFQQVQEQMEaEIAHLKQENGILRDAVSNTT 439
Cdd:pfam05483 336 QMEELnkakaahSFVVTEFEATTCSLEELLRTEQQRLEKNEDQLKIITMELQKKSSELE-EMTKFKNNKEVELEELKKIL 414
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 440 NQlESKQSAELNKLRQDCGRLVSELNEKTGKLQQEGVQKKNAEQAATQLKVQLQEAERRWEEVQSYIRKRTAEH-----E 514
Cdd:pfam05483 415 AE-DEKLLDEKKQFEKIAEELKGKEQELIFLLQAREKEIHDLEIQLTAIKTSEEHYLKEVEDLKTELEKEKLKNieltaH 493
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 515 AAQQDLQSKFVAKE--NEVQSLHSKLTDTLVSKQQLEQRLMQLMESEQKRASKEESLQIQVQDILEQNEALKAQIQQFHS 592
Cdd:pfam05483 494 CDKLLLENKELTQEasDMTLELKKHQEDIINCKKQEERMLKQIENLEEKEMNLRDELESVREEFIQKGDEVKCKLDKSEE 573
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 593 QIAAQTSASVLAEELHKVIAEKDKQLKQTEDSLANEQDHLASKEEELKDVQNM-NFLLKAEVQKLQALANEQAATAHEVE 671
Cdd:pfam05483 574 NARSIEYEVLKKEKQMKILENKCNNLKKQIENKNKNIEELHQENKALKKKGSAeNKQLNAYEIKVNKLELELASAKQKFE 653
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 672 KM----QKSIHVKEDKIRLLEEQLQHEVASKMEELKILSEQNKALQSEVQKLQTAVSQQPNkdvveQMEKCIQEKDEKLR 747
Cdd:pfam05483 654 EIidnyQKEIEDKKISEEKLLEEVEKAKAIADEAVKLQKEIDKRCQHKIAEMVALMEKHKH-----QYDKIIEERDSELG 728
|
490 500 510
....*....|....*....|....*....|....*
gi 1907099785 748 TVEELLETGLIQVATREEELSAIRTENSTLTREVQ 782
Cdd:pfam05483 729 LYKNKEQEQSSAKAALEIELSNIKAELLSLKKQLE 763
|
|
| COG4913 |
COG4913 |
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown]; |
1054-1206 |
3.23e-03 |
|
Uncharacterized conserved protein, contains a C-terminal ATPase domain [Function unknown];
Pssm-ID: 443941 [Multi-domain] Cd Length: 1089 Bit Score: 41.82 E-value: 3.23e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1054 GTSDAEAVKVLEHRLKEASEMHTLLQLECEKYKSVLAETEGILQKLQRSVEQEESKwkIKADESQRMIkqmqssfTASER 1133
Cdd:COG4913 605 GFDNRAKLAALEAELAELEEELAEAEERLEALEAELDALQERREALQRLAEYSWDE--IDVASAEREI-------AELEA 675
|
90 100 110 120 130 140 150
....*....|....*....|....*....|....*....|....*....|....*....|....*....|...
gi 1907099785 1134 ELERLRQENKDMENLRRErehlemeLEKAEMERSTYVMEVRELKTQLNETHSKLQNEQTERKKVADDLHKAQQ 1206
Cdd:COG4913 676 ELERLDASSDDLAALEEQ-------LEELEAELEELEEELDELKGEIGRLEKELEQAEEELDELQDRLEAAED 741
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
392-1262 |
4.40e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 41.58 E-value: 4.40e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 392 FQNKMHASYQETQQMQMkfqqvqEQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDCG----RLVSELNEK 467
Cdd:TIGR01612 701 LKSKIDKEYDKIQNMET------ATVELHLSNIENKKNELLDIIVEIKKHIHGEINKDLNKILEDFKnkekELSNKINDY 774
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 468 TGKLQQEGVQKKNAEQAATQLKVQL-------QEAERRWEEVQSYIR----------KRTAEHEAAQQDLQSK---FVAK 527
Cdd:TIGR01612 775 AKEKDELNKYKSKISEIKNHYNDQInidnikdEDAKQNYDKSKEYIKtisikedeifKIINEMKFMKDDFLNKvdkFINF 854
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 528 EN----EVQSLHSKLTDtLVSKQQLEQRLMQLMESEQK-----------RASKEESLQ-----IQVQDILEQNEALKAQI 587
Cdd:TIGR01612 855 ENnckeKIDSEHEQFAE-LTNKIKAEISDDKLNDYEKKfndskslineiNKSIEEEYQnintlKKVDEYIKICENTKESI 933
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 588 QQFHSQiaaQTSASVLAEELHKVIAEKDKQLK----QTEDSLANEQDHL--ASKEEELKDVQNMNFLLKAEVQKLQAL-- 659
Cdd:TIGR01612 934 EKFHNK---QNILKEILNKNIDTIKESNLIEKsykdKFDNTLIDKINELdkAFKDASLNDYEAKNNELIKYFNDLKANlg 1010
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 660 ANEQAATAHEVEKMQKSIHVKEDKIRLLEEQLQH-EVASKMEELKILSEQNKALQSEVQKLQTAVSQQPNKDVVEQMEkc 738
Cdd:TIGR01612 1011 KNKENMLYHQFDEKEKATNDIEQKIEDANKNIPNiEIAIHTSIYNIIDEIEKEIGKNIELLNKEILEEAEINITNFNE-- 1088
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 739 IQEKdEKLRTVEELLETGLIQVAtreEELSAIRTENSTLTREV-------QELKAKQSDQVSFV-SLIEDLKRVIHEK-- 808
Cdd:TIGR01612 1089 IKEK-LKHYNFDDFGKEENIKYA---DEINKIKDDIKNLDQKIdhhikalEEIKKKSENYIDEIkAQINDLEDVADKAis 1164
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 809 DGQIKSVEELLEVELLKVANKEKTVQALKQEI-EVLKEEIGNAQLEKAHQLSVtSQVQELQNLL--------RGKEEQVN 879
Cdd:TIGR01612 1165 NDDPEEIEKKIENIVTKIDKKKNIYDEIKKLLnEIAEIEKDKTSLEEVKGINL-SYGKNLGKLFlekideekKKSEHMIK 1243
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 880 SMKAALEDRDRDLRgrgtcaqvcSTPQFEELESVLKEKDNEIKRIEV---KLKDTESDVSKMSELLKEVQeeNKFLKcqL 956
Cdd:TIGR01612 1244 AMEAYIEDLDEIKE---------KSPEIENEMGIEMDIKAEMETFNIshdDDKDHHIISKKHDENISDIR--EKSLK--I 1310
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 957 SHQKHQQASFPS-QEELQTVISEKEK---EITDLCNELESLKNAVEHQRKKN--NERRQHVEAIELESKDLLKRLFPTVS 1030
Cdd:TIGR01612 1311 IEDFSEESDINDiKKELQKNLLDAQKhnsDINLYLNEIANIYNILKLNKIKKiiDEVKEYTKEIEENNKNIKDELDKSEK 1390
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1031 VPSNLNYSEWLRGFEKKAKACVAGTSDAEAVKVLE----HRLKEASEMHTLLQLECEKYKSVLAETEGI---------LQ 1097
Cdd:TIGR01612 1391 LIKKIKDDINLEECKSKIESTLDDKDIDECIKKIKelknHILSEESNIDTYFKNADENNENVLLLFKNIemadnksqhIL 1470
|
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1098 KLQRSVEQEESKWKIKA-----DESQRMIKQMQSSFTASERELERLRQENKDMENLRREREHLEME--LEKAEMERSTYV 1170
Cdd:TIGR01612 1471 KIKKDNATNDHDFNINElkehiDKSKGCKDEADKNAKAIEKNKELFEQYKKDVTELLNKYSALAIKnkFAKTKKDSEIII 1550
|
890 900 910 920 930 940 950 960
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1171 MEVRELKTQL----NETHSKLQNEQTERKKVADDLHK----------AQQSLNSIHSKIsLKAAgdTVVIENSDISPEME 1236
Cdd:TIGR01612 1551 KEIKDAHKKFileaEKSEQKIKEIKKEKFRIEDDAAKndksnkaaidIQLSLENFENKF-LKIS--DIKKKINDCLKETE 1627
|
970 980
....*....|....*....|....*.
gi 1907099785 1237 SPEKETMSVSLNQTVTQLQQLLQEVN 1262
Cdd:TIGR01612 1628 SIEKKISSFSIDSQDTELKENGDNLN 1653
|
|
| ClpA |
COG0542 |
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein ... |
546-662 |
4.52e-03 |
|
ATP-dependent Clp protease, ATP-binding subunit ClpA [Posttranslational modification, protein turnover, chaperones];
Pssm-ID: 440308 [Multi-domain] Cd Length: 836 Bit Score: 41.22 E-value: 4.52e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 546 QQLEQRLMQL------MESEQKRASKE--ESLQIQVQDILEQNEALKAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQ 617
Cdd:COG0542 414 DELERRLEQLeiekeaLKKEQDEASFErlAELRDELAELEEELEALKARWEAEKELIEEIQELKEELEQRYGKIPELEKE 493
|
90 100 110 120 130
....*....|....*....|....*....|....*....|....*....|...
gi 1907099785 618 LKQTEDSLANEQDHLASK--EEELKDVQNM------NFLLKAEVQKLQALANE 662
Cdd:COG0542 494 LAELEEELAELAPLLREEvtEEDIAEVVSRwtgipvGKLLEGEREKLLNLEEE 546
|
|
| EnvC |
COG4942 |
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ... |
611-814 |
4.62e-03 |
|
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain] Cd Length: 377 Bit Score: 40.90 E-value: 4.62e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 611 IAEKDKQLKQTEDSLANEQDHLASKEEELKDVQnmnfllkaevQKLQALANEQAATAHEVEKMQKSIHVKEDKIRLLEEQ 690
Cdd:COG4942 22 AAEAEAELEQLQQEIAELEKELAALKKEEKALL----------KQLAALERRIAALARRIRALEQELAALEAELAELEKE 91
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 691 LQHEVASKMEELKILSEQNKALQ--SEVQKLQTAVSQQPNKD----------VVEQMEKCIQEKDEKLRTVEEL------ 752
Cdd:COG4942 92 IAELRAELEAQKEELAELLRALYrlGRQPPLALLLSPEDFLDavrrlqylkyLAPARREQAEELRADLAELAALraelea 171
|
170 180 190 200 210 220 230
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....
gi 1907099785 753 ----LETGLIQVATREEELSAIRTE--------NSTLTREVQELKAKQSDQVSFVSLIEDLKRVIHEKDGQIKS 814
Cdd:COG4942 172 eraeLEALLAELEEERAALEALKAErqkllarlEKELAELAAELAELQQEAEELEALIARLEAEAAAAAERTPA 245
|
|
| PRK09039 |
PRK09039 |
peptidoglycan -binding protein; |
601-773 |
5.38e-03 |
|
peptidoglycan -binding protein;
Pssm-ID: 181619 [Multi-domain] Cd Length: 343 Bit Score: 40.72 E-value: 5.38e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 601 SVLAEEL---HKVIAEKDKQLKQTEDSLANEQDHLASKEEELKDVQNMNFLLKAEVQKLQALANEQAATAHEVEKmqksi 677
Cdd:PRK09039 42 FFLSREIsgkDSALDRLNSQIAELADLLSLERQGNQDLQDSVANLRASLSAAEAERSRLQALLAELAGAGAAAEG----- 116
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 678 hvkedKIRLLEEQL---QHEVASKMEELKILSEQNKALQSEVQKLQTAVSQQPNKDvveqmekciQEKDEKLRTVEELLE 754
Cdd:PRK09039 117 -----RAGELAQELdseKQVSARALAQVELLNQQIAALRRQLAALEAALDASEKRD---------RESQAKIADLGRRLN 182
|
170
....*....|....*....
gi 1907099785 755 TGLiqvATREEELSAIRTE 773
Cdd:PRK09039 183 VAL---AQRVQELNRYRSE 198
|
|
| mukB |
PRK04863 |
chromosome partition protein MukB; |
969-1209 |
5.87e-03 |
|
chromosome partition protein MukB;
Pssm-ID: 235316 [Multi-domain] Cd Length: 1486 Bit Score: 41.10 E-value: 5.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 969 QEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNERRQHVEAIElESKDLLKRLFPTVSvpsnlNYSEWLRGFEKKA 1048
Cdd:PRK04863 378 QEENEARAEAAEEEVDELKSQLADYQQALDVQQTRAIQYQQAVQALE-RAKQLCGLPDLTAD-----NAEDWLEEFQAKE 451
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1049 KACvagtsdAEAVKVLEHRLKEASEMHTllQLEcEKYKSVLAETEGIlqklQRSVEQEESKWKIKADESQRMIKQMQSSF 1128
Cdd:PRK04863 452 QEA------TEELLSLEQKLSVAQAAHS--QFE-QAYQLVRKIAGEV----SRSEAWDVARELLRRLREQRHLAEQLQQL 518
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1129 TASERELERLRQENKDMENLRRE-----------REHLEMELEKAEMER---STYVMEVRELKTQLNETHSKLQNEQTER 1194
Cdd:PRK04863 519 RMRLSELEQRLRQQQRAERLLAEfckrlgknlddEDELEQLQEELEARLeslSESVSEARERRMALRQQLEQLQARIQRL 598
|
250
....*....|....*
gi 1907099785 1195 KKVADDLHKAQQSLN 1209
Cdd:PRK04863 599 AARAPAWLAAQDALA 613
|
|
| EmrA |
COG1566 |
Multidrug resistance efflux pump EmrA [Defense mechanisms]; |
481-596 |
6.53e-03 |
|
Multidrug resistance efflux pump EmrA [Defense mechanisms];
Pssm-ID: 441174 [Multi-domain] Cd Length: 331 Bit Score: 40.42 E-value: 6.53e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 481 AEQAATQLKVQLQEAERRWEEVQSYI--RKRTAEHEAAQQDLQSKFVAKENEVQSLHSKLTDTLVSKQQLEQRLMQLMES 558
Cdd:COG1566 81 LQAALAQAEAQLAAAEAQLARLEAELgaEAEIAAAEAQLAAAQAQLDLAQRELERYQALYKKGAVSQQELDEARAALDAA 160
|
90 100 110 120
....*....|....*....|....*....|....*....|
gi 1907099785 559 EQKRASKEESLQIQVQDILEQNE--ALKAQIQQFHSQIAA 596
Cdd:COG1566 161 QAQLEAAQAQLAQAQAGLREEEElaAAQAQVAQAEAALAQ 200
|
|
| CwlO1 |
COG3883 |
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function ... |
564-776 |
6.54e-03 |
|
Uncharacterized N-terminal coiled-coil domain of peptidoglycan hydrolase CwlO [Function unknown];
Pssm-ID: 443091 [Multi-domain] Cd Length: 379 Bit Score: 40.58 E-value: 6.54e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 564 SKEESLQIQVQDILEQNEALKAQIQQFHSQIAAQTSAsvlAEELHKVIAEKDKQLKQTEDSLANEQDHLASKEEELKD-- 641
Cdd:COG3883 16 PQIQAKQKELSELQAELEAAQAELDALQAELEELNEE---YNELQAELEALQAEIDKLQAEIAEAEAEIEERREELGEra 92
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 642 ---------VQNMNFLLKAE-----VQKLQALANEQAATAHEVEKMQKSIHVKEDKIRLLEEQLQhEVASKMEELKILSE 707
Cdd:COG3883 93 ralyrsggsVSYLDVLLGSEsfsdfLDRLSALSKIADADADLLEELKADKAELEAKKAELEAKLA-ELEALKAELEAAKA 171
|
170 180 190 200 210 220
....*....|....*....|....*....|....*....|....*....|....*....|....*....
gi 1907099785 708 QNKALQSEVQKLQTAVSQQPNKDVVEQMEKCIQEKDEKLRTVEELLETGLIQVATREEELSAIRTENST 776
Cdd:COG3883 172 ELEAQQAEQEALLAQLSAEEAAAEAQLAELEAELAAAEAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 240
|
|
| Mplasa_alph_rch |
TIGR04523 |
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of ... |
669-1205 |
7.60e-03 |
|
helix-rich Mycoplasma protein; Members of this family occur strictly within a subset of Mycoplasma species. Members average 750 amino acids in length, including signal peptide. Sequences are predicted (Jpred 3) to be almost entirely alpha-helical. These sequences show strong periodicity (consistent with long alpha helical structures) and low complexity rich in D,E,N,Q, and K. Genes encoding these proteins are often found in tandem. The function is unknown.
Pssm-ID: 275316 [Multi-domain] Cd Length: 745 Bit Score: 40.77 E-value: 7.60e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 669 EVEKMQKSIHVKEDKIRLLEEQLQHEVaskmeelkilsEQNKALQSEVQKLQTAVSQQPNKDVVEQmeKCIQEKDEKLRT 748
Cdd:TIGR04523 41 KLKTIKNELKNKEKELKNLDKNLNKDE-----------EKINNSNNKIKILEQQIKDLNDKLKKNK--DKINKLNSDLSK 107
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 749 VEELLETGLIQVATREEELSAIRTE----NSTLTREVQELKAKQSDQVSFVSLIEDLKRvihekdgQIKSVEELLEVELL 824
Cdd:TIGR04523 108 INSEIKNDKEQKNKLEVELNKLEKQkkenKKNIDKFLTEIKKKEKELEKLNNKYNDLKK-------QKEELENELNLLEK 180
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 825 KVANKEKTVQALKQEIEVLKEEIGNAQLEKAHQLSVTSQVQELQNLLRGKEEQVNSMKAALEDRDRDLRGRGTCAQVCST 904
Cdd:TIGR04523 181 EKLNIQKNIDKIKNKLLKLELLLSNLKKKIQKNKSLESQISELKKQNNQLKDNIEKKQQEINEKTTEISNTQTQLNQLKD 260
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 905 PQFEELESvLKEKDNEIKRIEVKLKDTESDV----SKMSELLKEVQEE-NKFLKCQLSHQKHQQasfpsqEELQTVISEK 979
Cdd:TIGR04523 261 EQNKIKKQ-LSEKQKELEQNNKKIKELEKQLnqlkSEISDLNNQKEQDwNKELKSELKNQEKKL------EEIQNQISQN 333
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 980 EKEITDLCNELESLKNAVEHQRKKNNERRQHVEAIELESKDLLKRlfptvsvpsNLNYSEWLRGFEKKAKACVAGTSDAE 1059
Cdd:TIGR04523 334 NKIISQLNEQISQLKKELTNSESENSEKQRELEEKQNEIEKLKKE---------NQSYKQEIKNLESQINDLESKIQNQE 404
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1060 AV-KVLEHRLKEASEMHTLLQLECEKYKSV----------LAETEGILQKLQRSVEQEESKWKIKADESQRMIKQMQSSF 1128
Cdd:TIGR04523 405 KLnQQKDEQIKKLQQEKELLEKEIERLKETiiknnseikdLTNQDSVKELIIKNLDNTRESLETQLKVLSRSINKIKQNL 484
|
490 500 510 520 530 540 550
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*..
gi 1907099785 1129 TASERELErlrQENKDMENLRREREHLEMELEKAEMERSTYVMEVRELKTQLNETHSKLQNEQTERKKVADDLHKAQ 1205
Cdd:TIGR04523 485 EQKQKELK---SKEKELKKLNEEKKELEEKVKDLTKKISSLKEKIEKLESEKKEKESKISDLEDELNKDDFELKKEN 558
|
|
| Cast |
pfam10174 |
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part ... |
744-1262 |
8.32e-03 |
|
RIM-binding protein of the cytomatrix active zone; This is a family of proteins that form part of the CAZ (cytomatrix at the active zone) complex which is involved in determining the site of synaptic vesicle fusion. The C-terminus is a PDZ-binding motif that binds directly to RIM (a small G protein Rab-3A effector). The family also contains four coiled-coil domains.
Pssm-ID: 431111 [Multi-domain] Cd Length: 766 Bit Score: 40.58 E-value: 8.32e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 744 EKLRTVEELLETGLIQVATREEELSAIRTENSTLTREVQELKAKQSDQVSFVSLIEDLKRVIH-EKDGQIKSVEELLEVE 822
Cdd:pfam10174 60 EQYRVTQEENQHLQLTIQALQDELRAQRDLNQLLQQDFTTSPVDGEDKFSTPELTEENFRRLQsEHERQAKELFLLRKTL 139
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 823 LLKVANKEKTVQALKQEIEVLKEEIGNAQlEKAHQLSVTSQVQELQNLLRGKEEQVNSMKAALEDRDRD-------LRGR 895
Cdd:pfam10174 140 EEMELRIETQKQTLGARDESIKKLLEMLQ-SKGLPKKSGEEDWERTRRIAEAEMQLGHLEVLLDQKEKEnihlreeLHRR 218
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 896 GTCAQvcSTPQFEELESVLKEKDNEIKRIEVKLKDTESDVS--KMSELL--KEVQEENKFLKCQLSHQKHQQASFpsqEE 971
Cdd:pfam10174 219 NQLQP--DPAKTKALQTVIEMKDTKISSLERNIRDLEDEVQmlKTNGLLhtEDREEEIKQMEVYKSHSKFMKNKI---DQ 293
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 972 LQTVISEKEKEITDLCNELESLKNavehqrkKNNERRQHVEAIE--LESKDLLKRLFPTVSVPSNLNYSEWLRGFEKKAK 1049
Cdd:pfam10174 294 LKQELSKKESELLALQTKLETLTN-------QNSDCKQHIEVLKesLTAKEQRAAILQTEVDALRLRLEEKESFLNKKTK 366
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1050 acvagtsdaeavkvlehRLKEASEMHTLLQLECEKYKSVLAETEGILQKLQRSVE--QEESKWKIKA-DESQRMIKQMQS 1126
Cdd:pfam10174 367 -----------------QLQDLTEEKSTLAGEIRDLKDMLDVKERKINVLQKKIEnlQEQLRDKDKQlAGLKERVKSLQT 429
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1127 SFTASEREL----ERLRQENKDMENLRREREHLEMELEKaemERSTYVMEVRELKTQLnethSKLQNEQTERKKVADDLH 1202
Cdd:pfam10174 430 DSSNTDTALttleEALSEKERIIERLKEQREREDRERLE---ELESLKKENKDLKEKV----SALQPELTEKESSLIDLK 502
|
490 500 510 520 530 540
....*....|....*....|....*....|....*....|....*....|....*....|....*.
gi 1907099785 1203 KAQQSLNSIHSKISLKAAGDTVVIENS-DISPEMESPEKETMSVSLNQT-----VTQLQQLLQEVN 1262
Cdd:pfam10174 503 EHASSLASSGLKKDSKLKSLEIAVEQKkEECSKLENQLKKAHNAEEAVRtnpeiNDRIRLLEQEVA 568
|
|
| DUF5401 |
pfam17380 |
Family of unknown function (DUF5401); This is a family of unknown function found in ... |
598-877 |
9.26e-03 |
|
Family of unknown function (DUF5401); This is a family of unknown function found in Chromadorea.
Pssm-ID: 375164 [Multi-domain] Cd Length: 722 Bit Score: 40.49 E-value: 9.26e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 598 TSASVLAEELHKVIAEKDKQLKQTEDSLAN-EQDHL-ASKEEELKDVQNMNFLLKAEVQKlQALANEQAATAHEVEKMQK 675
Cdd:pfam17380 266 TENEFLNQLLHIVQHQKAVSERQQQEKFEKmEQERLrQEKEEKAREVERRRKLEEAEKAR-QAEMDRQAAIYAEQERMAM 344
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 676 SIHVKEDKIRL------LEEQLQHEVA---SKMEELKIL----SEQNKALQSEV-----QKLQTAVSQQPNKDVVEQMEK 737
Cdd:pfam17380 345 ERERELERIRQeerkreLERIRQEEIAmeiSRMRELERLqmerQQKNERVRQELeaarkVKILEEERQRKIQQQKVEMEQ 424
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 738 CIQEKDE----KLRTVEELLETGLIQV----ATREEELSAIRTENSTLTREVQELKAKQSDQvsfvSLIEDLKRVIHEKD 809
Cdd:pfam17380 425 IRAEQEEarqrEVRRLEEERAREMERVrleeQERQQQVERLRQQEEERKRKKLELEKEKRDR----KRAEEQRRKILEKE 500
|
250 260 270 280 290 300
....*....|....*....|....*....|....*....|....*....|....*....|....*...
gi 1907099785 810 GQIKSVEELLEVELLKVANKEktvQALKQEIEVLKEEIGNAQLEKAHQLSVTSQVQELQNLLRGKEEQ 877
Cdd:pfam17380 501 LEERKQAMIEEERKRKLLEKE---MEERQKAIYEEERRREAEEERRKQQEMEERRRIQEQMRKATEER 565
|
|
| DR0291 |
COG1579 |
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General ... |
748-944 |
9.28e-03 |
|
Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain [General function prediction only];
Pssm-ID: 441187 [Multi-domain] Cd Length: 236 Bit Score: 39.14 E-value: 9.28e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 748 TVEELLETgLIQVATREEELSAIRTENSTLTREVQELKAK----QSDQVSFVSLIEDLKRVIHEKDGQIKSVEELLEVEL 823
Cdd:COG1579 1 AMPEDLRA-LLDLQELDSELDRLEHRLKELPAELAELEDElaalEARLEAAKTELEDLEKEIKRLELEIEEVEARIKKYE 79
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 824 LKVAN--KEKTVQALKQEIEVLKEEIgnAQLEKahqlsvtsQVQELQNLLRGKEEQVNSMKAALEDRDRDLRGRGtcaqv 901
Cdd:COG1579 80 EQLGNvrNNKEYEALQKEIESLKRRI--SDLED--------EILELMERIEELEEELAELEAELAELEAELEEKK----- 144
|
170 180 190 200
....*....|....*....|....*....|....*....|...
gi 1907099785 902 cstpqfEELESVLKEKDNEIKRIEVKLKDTESDVSKmsELLKE 944
Cdd:COG1579 145 ------AELDEELAELEAELEELEAEREELAAKIPP--ELLAL 179
|
|
| 235kDa-fam |
TIGR01612 |
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in ... |
431-1218 |
9.31e-03 |
|
reticulocyte binding/rhoptry protein; This model represents a group of paralogous families in plasmodium species alternately annotated as reticulocyte binding protein, 235-kDa family protein and rhoptry protein. Rhoptry protein is localized on the cell surface and is extremely large (although apparently lacking in repeat structure) and is important for the process of invasion of the RBCs by the parasite. These proteins are found in P. falciparum, P. vivax and P. yoelii.
Pssm-ID: 130673 [Multi-domain] Cd Length: 2757 Bit Score: 40.42 E-value: 9.31e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 431 LRDAVSNTTNQLES-KQSAELNKLRQDCGRLVSELNEKTGKLQQEGVqkKNAEQAATQLKVQLQ-----EAERRWEEVQS 504
Cdd:TIGR01612 605 LKEKIKNISDKNEYiKKAIDLKKIIENNNAYIDELAKISPYQVPEHL--KNKDKIYSTIKSELSkiyedDIDALYNELSS 682
|
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 505 YIRKR---TAEHEAAQQDLQSKFVAKENEVQSLHS---------------KLTDTLVSKQ-----QLEQRLMQLMESEQk 561
Cdd:TIGR01612 683 IVKENaidNTEDKAKLDDLKSKIDKEYDKIQNMETatvelhlsnienkknELLDIIVEIKkhihgEINKDLNKILEDFK- 761
|
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 562 raSKEESLQIQVQDILEQNEAL---KAQIQQFHSQIAAQTSASVLAEELHKVIAEKDKQLKQTedslaneqdhLASKEEE 638
Cdd:TIGR01612 762 --NKEKELSNKINDYAKEKDELnkyKSKISEIKNHYNDQINIDNIKDEDAKQNYDKSKEYIKT----------ISIKEDE 829
|
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 639 L-KDVQNMNFLLKAEVQKLQALANEQAATAHEVEKMQKSIHVKEDKIR--LLEEQLQHEVASKMEELKILSEQNKALQSE 715
Cdd:TIGR01612 830 IfKIINEMKFMKDDFLNKVDKFINFENNCKEKIDSEHEQFAELTNKIKaeISDDKLNDYEKKFNDSKSLINEINKSIEEE 909
|
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 716 VQKLQTAVSQQPNKDVVEQMEKCIQEKDEKLRTVEELL--------ETGLIQVATREEELSAIRTENSTLTREVQE--LK 785
Cdd:TIGR01612 910 YQNINTLKKVDEYIKICENTKESIEKFHNKQNILKEILnknidtikESNLIEKSYKDKFDNTLIDKINELDKAFKDasLN 989
|
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 786 AKQSDQVSFVSLIEDLKRVIHEKDGQIksveellevELLKVANKEKTVQALKQEIEVLKEEIGNaqLEKAHQLSVTSQVQ 865
Cdd:TIGR01612 990 DYEAKNNELIKYFNDLKANLGKNKENM---------LYHQFDEKEKATNDIEQKIEDANKNIPN--IEIAIHTSIYNIID 1058
|
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 866 ELQNLLRGKEEQVNsmKAALEDRDRDLRGRGTCAQVCSTPQFEELesvLKEKD----NEIKRIEVKLKDTESDVSKMSEL 941
Cdd:TIGR01612 1059 EIEKEIGKNIELLN--KEILEEAEINITNFNEIKEKLKHYNFDDF---GKEENikyaDEINKIKDDIKNLDQKIDHHIKA 1133
|
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 942 LKEVQEENKFLKCQLSHQKHQQASFPSQEELQTVISEKEKEITDLCNELESLKNAVEHQRKKNNErrqhVEAIELESKDL 1021
Cdd:TIGR01612 1134 LEEIKKKSENYIDEIKAQINDLEDVADKAISNDDPEEIEKKIENIVTKIDKKKNIYDEIKKLLNE----IAEIEKDKTSL 1209
|
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1022 LKRLFPTVSVPSNLNYSEWLRGFEKKAKAcvagtsdAEAVKVLEHRLKEASEMHTLLQlECEKYKSVLAETEGILQKLQR 1101
Cdd:TIGR01612 1210 EEVKGINLSYGKNLGKLFLEKIDEEKKKS-------EHMIKAMEAYIEDLDEIKEKSP-EIENEMGIEMDIKAEMETFNI 1281
|
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907099785 1102 SVEQEESKWKI--KADESQRMIKQMQSSFTASERELERLRQENKDMEN--LRREREHLEMELEKAEMERSTYVMEVRELK 1177
Cdd:TIGR01612 1282 SHDDDKDHHIIskKHDENISDIREKSLKIIEDFSEESDINDIKKELQKnlLDAQKHNSDINLYLNEIANIYNILKLNKIK 1361
|
810 820 830 840
....*....|....*....|....*....|....*....|.
gi 1907099785 1178 TQLNETHSKLQNEQTERKKVADDLHKAQQSLNSIHSKISLK 1218
Cdd:TIGR01612 1362 KIIDEVKEYTKEIEENNKNIKDELDKSEKLIKKIKDDINLE 1402
|
|
| |
