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Conserved domains on  [gi|1907081886|ref|XP_036012608|]
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ankyrin repeat domain-containing protein 13B isoform X14 [Mus musculus]

Protein Classification

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
GPCR_chapero_1 super family cl46312
GPCR-chaperone; This domain, and the associated ANK family repeat pfam00023 domain, together ...
 1-98 9.45e-31

GPCR-chaperone; This domain, and the associated ANK family repeat pfam00023 domain, together act as a chaperone for biogenesis and folding of the DP receptor for prostaglandin D2.


The actual alignment was detected with superfamily member pfam11904:

Pssm-ID: 480652  Cd Length: 298  Bit Score: 119.28  E-value: 9.45e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907081886   1 MAVSNALFAKLRDFITLRLPPGFPVKIEIPIFHILNARITFGNLNGCDePVPSVRGSPGSETPSPGsdsssvssssstts 80
Cdd:pfam11904 217 LANKVKHFRRLREFITLKLPPGFPVKIEIPVFPTVNARITFTKFEELD-PVEEFSTPIKSPERGSP-------------- 281

                          90
                  ....*....|....*...
gi 1907081886  81 cRACEISPALFEAPRGYS 98
Cdd:pfam11904 282 -SSCEIDDDPFEIPSGYT 298
 
Name Accession Description Interval E-value
GPCR_chapero_1 pfam11904
GPCR-chaperone; This domain, and the associated ANK family repeat pfam00023 domain, together ...
 1-98 9.45e-31

GPCR-chaperone; This domain, and the associated ANK family repeat pfam00023 domain, together act as a chaperone for biogenesis and folding of the DP receptor for prostaglandin D2.


Pssm-ID: 463391  Cd Length: 298  Bit Score: 119.28  E-value: 9.45e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907081886   1 MAVSNALFAKLRDFITLRLPPGFPVKIEIPIFHILNARITFGNLNGCDePVPSVRGSPGSETPSPGsdsssvssssstts 80
Cdd:pfam11904 217 LANKVKHFRRLREFITLKLPPGFPVKIEIPVFPTVNARITFTKFEELD-PVEEFSTPIKSPERGSP-------------- 281

                          90
                  ....*....|....*...
gi 1907081886  81 cRACEISPALFEAPRGYS 98
Cdd:pfam11904 282 -SSCEIDDDPFEIPSGYT 298
 
Name Accession Description Interval E-value
GPCR_chapero_1 pfam11904
GPCR-chaperone; This domain, and the associated ANK family repeat pfam00023 domain, together ...
 1-98 9.45e-31

GPCR-chaperone; This domain, and the associated ANK family repeat pfam00023 domain, together act as a chaperone for biogenesis and folding of the DP receptor for prostaglandin D2.


Pssm-ID: 463391  Cd Length: 298  Bit Score: 119.28  E-value: 9.45e-31
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907081886   1 MAVSNALFAKLRDFITLRLPPGFPVKIEIPIFHILNARITFGNLNGCDePVPSVRGSPGSETPSPGsdsssvssssstts 80
Cdd:pfam11904 217 LANKVKHFRRLREFITLKLPPGFPVKIEIPVFPTVNARITFTKFEELD-PVEEFSTPIKSPERGSP-------------- 281

                          90
                  ....*....|....*...
gi 1907081886  81 cRACEISPALFEAPRGYS 98
Cdd:pfam11904 282 -SSCEIDDDPFEIPSGYT 298
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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