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Conserved domains on  [gi|1907196521|ref|XP_036010716|]
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zinc finger protein 609 isoform X3 [Mus musculus]

Protein Classification

C2H2-type zinc finger family protein( domain architecture ID 705934)

Cys2His2 (C2H2)-type zinc finger family protein may be involved in transcriptional regulation

Gene Ontology:  GO:0046872

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
SFP1 super family cl25788
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 163-284 3.97e-05

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


The actual alignment was detected with superfamily member COG5189:

Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 47.41  E-value: 3.97e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907196521  163 GSQNSSeHRPPASSTSEDVkaSPSSANKRKSKPLSDMElnSSSEDSKGSKRVRTNSMGSATGPLpgtkveptLVDRNCPS 242
Cdd:COG5189    275 GSAELF-EESSLGFDYEFI--HKSVGNKEIRGGISTGE--MIDVRKLPCTNSSSNGKLAHGGER--------NIDTPSRM 341

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*..
gi 1907196521  243 PVLID-----CPHPNCNKKYKHINGLKYHQAHAHTDDDSKPEADGDS 284
Cdd:COG5189    342 LKVKDgkpykCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEK 388
 
Name Accession Description Interval E-value
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 163-284 3.97e-05

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 47.41  E-value: 3.97e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907196521  163 GSQNSSeHRPPASSTSEDVkaSPSSANKRKSKPLSDMElnSSSEDSKGSKRVRTNSMGSATGPLpgtkveptLVDRNCPS 242
Cdd:COG5189    275 GSAELF-EESSLGFDYEFI--HKSVGNKEIRGGISTGE--MIDVRKLPCTNSSSNGKLAHGGER--------NIDTPSRM 341

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*..
gi 1907196521  243 PVLID-----CPHPNCNKKYKHINGLKYHQAHAHTDDDSKPEADGDS 284
Cdd:COG5189    342 LKVKDgkpykCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEK 388
 
Name Accession Description Interval E-value
SFP1 COG5189
Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division ...
 163-284 3.97e-05

Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning];


Pssm-ID: 227516 [Multi-domain]  Cd Length: 423  Bit Score: 47.41  E-value: 3.97e-05
                           10        20        30        40        50        60        70        80
                   ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907196521  163 GSQNSSeHRPPASSTSEDVkaSPSSANKRKSKPLSDMElnSSSEDSKGSKRVRTNSMGSATGPLpgtkveptLVDRNCPS 242
Cdd:COG5189    275 GSAELF-EESSLGFDYEFI--HKSVGNKEIRGGISTGE--MIDVRKLPCTNSSSNGKLAHGGER--------NIDTPSRM 341

                           90       100       110       120
                   ....*....|....*....|....*....|....*....|....*..
gi 1907196521  243 PVLID-----CPHPNCNKKYKHINGLKYHQAHAHTDDDSKPEADGDS 284
Cdd:COG5189    342 LKVKDgkpykCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEK 388
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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