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janus kinase and microtubule-interacting protein 3 isoform X1 [Mus musculus]
Protein Classification
kinesin family protein ( domain architecture ID 13531091 )
kinesin family protein is a microtubule-dependent molecular motor that plays an important role in intracellular transport and in cell division and has ATPase-containing motor domain; similar to carboxy-terminal kinesins that contains a C-terminal domain responsible for the motor activity (it hydrolyzes ATP and binds microtubules)
List of domain hits
Name
Accession
Description
Interval
E-value
JAKMIP_CC3
pfam16034 JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ...
429-627
7.90e-89
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain]
Cd Length: 199
Bit Score: 279.46
E-value: 7.90e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 429 ERDKL L R Y RKQR K K MA K LPKKPV VVETFFGYDEEAS LE S DG SS I SY Q TDRTD Q TP C TP ED DL E EG M A K EE T ELRFRQLT M 508
Cdd:pfam16034 1 ERDKL I R A RKQR R K EK K KKLRDM VVETFFGYDEEAS VD S ET SS L SY N TDRTD S TP A TP DE DL D EG V A A EE A ELRFRQLT R 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 509 EYQALQRAYALLQEQ V GGTLDAERE V KTREQLQAE IQ RAQ T R V EDLE K ALA EQ GQD M KW I EEKQAL Y RRNQELVEKI KQ M 588
Cdd:pfam16034 81 EYQALQRAYALLQEQ S GGTLDAERE A KTREQLQAE LR RAQ S R I EDLE S ALA QK GQD S KW V EEKQAL I RRNQELVEKI RI M 160
170 180 190
....*....|....*....|....*....|....*....
gi 1907184480 589 E T EE A RLK H E V QDA K DQNELLEFRILELEERER K SPAIN 627
Cdd:pfam16034 161 E Q EE G RLK N E I QDA R DQNELLEFRILELEERER R SPAIN 199
Smc super family
cl34174 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
13-620
9.90e-09
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
COG1196 :Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 59.18
E-value: 9.90e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 13 D KAE TLAA L QAANE EL R A K L TDIQIELQQEKSKVSKV E R E KSQELKQVR E H E QRKHAVLVT EL KTK L H E EK m K EL QAVRE 92
Cdd:COG1196 210 E KAE RYRE L KEELK EL E A E L LLLKLRELEAELEELEA E L E ELEAELEEL E A E LAELEAELE EL RLE L E E LE - L EL EEAQA 288
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 93 A l LRQHE AEL L R VIKIKDNENQ R LQA L LNT L RDGAPDKVKTVLLC E AK EE AKKGF E V E KVKMQQ E IS E LKGAKKQV EEAL 172
Cdd:COG1196 289 E - EYELL AEL A R LEQDIARLEE R RRE L EER L EELEEELAELEEEL E EL EE ELEEL E E E LEEAEE E LE E AEAELAEA EEAL 367
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 173 TMVIQADKIKAA E IRSVYHLHQ E EITRIKKECEREIRRLME E IRFKD R AVFVL E RELGVQAGH A QRLQLQK E ALDEQLSQ 252
Cdd:COG1196 368 LEAEAELAEAEE E LEELAEELL E ALRAAAELAAQLEELEEA E EALLE R LERLE E ELEELEEAL A ELEEEEE E EEEALEEA 447
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 253 A K E AER hpgsprrelpyasgagdasdhsgsp EQQLD E KDARRFQLKIA E LSAIIRK L EDRNAL L S E ERNE LL KR L REAES 332
Cdd:COG1196 448 A E E EAE ------------------------- LEEEE E ALLELLAELLE E AALLEAA L AELLEE L A E AAAR LL LL L EAEAD 502
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 333 QYKP L LDKNKR L TRKNEDLSHTLRRIESKLKFVTQENI E MRQR A GIIRR pssl NDL D QSQDERE I DF LK LQIVEQQNL id 412
Cdd:COG1196 503 YEGF L EGVKAA L LLAGLRGLAGAVAVLIGVEAAYEAAL E AALA A ALQNI ---- VVE D DEVAAAA I EY LK AAKAGRATF -- 576
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 413 elsktletagyvksv L ER DK LLRYRKQRKKM A KLPKKPV V VETFFGYD E EASLESDGSSISYQTDRTD qtpctp EDDLEE 492
Cdd:COG1196 577 --------------- L PL DK IRARAALAAAL A RGAIGAA V DLVASDLR E ADARYYVLGDTLLGRTLVA ------ ARLEAA 635
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 493 GMAKEETEL R F R QL T M E YQALQRAYA L LQEQVGGT L D A ER E VKTREQLQ AE IQRAQTRVEDLEKALA E QGQDMKWIE E KQ 572
Cdd:COG1196 636 LRRAVTLAG R L R EV T L E GEGGSAGGS L TGGSRREL L A A LL E AEAELEEL AE RLAEEELELEEALLAE E EEERELAEA E EE 715
570 580 590 600
....*....|....*....|....*....|....*....|....*...
gi 1907184480 573 A L YRRNQ E LVEKIKQMETE E AR L KHEVQDAKDQN E LLEFRIL E LEER E 620
Cdd:COG1196 716 R L EEELE E EALEEQLEAER E EL L EELLEEEELLE E EALEELP E PPDL E 763
YhaN super family
cl34808 Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
489-825
7.80e-03
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
COG4717 :Pssm-ID: 443752 [Multi-domain]
Cd Length: 641
Bit Score: 39.75
E-value: 7.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 489 D L E E GMA K E E TE L RFRQ L TM E YQ AL QRAY A L L Q E QVG gtl DA E REVKTREQ L QA E IQRAQTRVED L EKA L A E QGQDMKWI 568
Cdd:COG4717 113 E L R E ELE K L E KL L QLLP L YQ E LE AL EAEL A E L P E RLE --- EL E ERLEELRE L EE E LEELEAELAE L QEE L E E LLEQLSLA 189
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 569 E E KQA -- L YRRNQ EL VEKIKQM E T E EARLKH E VQDAKDQN E L LE FRILELEER ER KSP A INF hh TPFVDGKSP L QVYCEA 646
Cdd:COG4717 190 T E EEL qd L AEELE EL QQRLAEL E E E LEEAQE E LEELEEEL E Q LE NELEAAALE ER LKE A RLL -- LLIAAALLA L LGLGGS 267
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 647 EGVTDILVTELMKKLDI L GDNAVSN L TN E EQVVVIQ A RTVLT L AEKWLQRI EE T E SA L QRKMVDLESEK E LFSKQKGYLD 726
Cdd:COG4717 268 LLSLILTIAGVLFLVLG L LALLFLL L AR E KASLGKE A EELQA L PALEELEE EE L E EL L AALGLPPDLSP E ELLELLDRIE 347
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 727 E ELDYRKQ A LDQAHKHI LE LEAMLYD AL QQ EAG AKVA E L L SE ----- EE REK LK VAV E QWKR Q VMSE L R E R ---- D A QIL 797
Cdd:COG4717 348 E LQELLRE A EELEEELQ LE ELEQEIA AL LA EAG VEDE E E L RA aleqa EE YQE LK EEL E ELEE Q LEEL L G E L eell E A LDE 427
330 340
....*....|....*....|....*...
gi 1907184480 798 R E RM E L L QIAQQRIK ELEE RI E TQKRQI 825
Cdd:COG4717 428 E E LE E E L EELEEELE ELEE EL E ELREEL 455
Name
Accession
Description
Interval
E-value
JAKMIP_CC3
pfam16034 JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ...
429-627
7.90e-89
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain]
Cd Length: 199
Bit Score: 279.46
E-value: 7.90e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 429 ERDKL L R Y RKQR K K MA K LPKKPV VVETFFGYDEEAS LE S DG SS I SY Q TDRTD Q TP C TP ED DL E EG M A K EE T ELRFRQLT M 508
Cdd:pfam16034 1 ERDKL I R A RKQR R K EK K KKLRDM VVETFFGYDEEAS VD S ET SS L SY N TDRTD S TP A TP DE DL D EG V A A EE A ELRFRQLT R 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 509 EYQALQRAYALLQEQ V GGTLDAERE V KTREQLQAE IQ RAQ T R V EDLE K ALA EQ GQD M KW I EEKQAL Y RRNQELVEKI KQ M 588
Cdd:pfam16034 81 EYQALQRAYALLQEQ S GGTLDAERE A KTREQLQAE LR RAQ S R I EDLE S ALA QK GQD S KW V EEKQAL I RRNQELVEKI RI M 160
170 180 190
....*....|....*....|....*....|....*....
gi 1907184480 589 E T EE A RLK H E V QDA K DQNELLEFRILELEERER K SPAIN 627
Cdd:pfam16034 161 E Q EE G RLK N E I QDA R DQNELLEFRILELEERER R SPAIN 199
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
13-620
9.90e-09
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 59.18
E-value: 9.90e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 13 D KAE TLAA L QAANE EL R A K L TDIQIELQQEKSKVSKV E R E KSQELKQVR E H E QRKHAVLVT EL KTK L H E EK m K EL QAVRE 92
Cdd:COG1196 210 E KAE RYRE L KEELK EL E A E L LLLKLRELEAELEELEA E L E ELEAELEEL E A E LAELEAELE EL RLE L E E LE - L EL EEAQA 288
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 93 A l LRQHE AEL L R VIKIKDNENQ R LQA L LNT L RDGAPDKVKTVLLC E AK EE AKKGF E V E KVKMQQ E IS E LKGAKKQV EEAL 172
Cdd:COG1196 289 E - EYELL AEL A R LEQDIARLEE R RRE L EER L EELEEELAELEEEL E EL EE ELEEL E E E LEEAEE E LE E AEAELAEA EEAL 367
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 173 TMVIQADKIKAA E IRSVYHLHQ E EITRIKKECEREIRRLME E IRFKD R AVFVL E RELGVQAGH A QRLQLQK E ALDEQLSQ 252
Cdd:COG1196 368 LEAEAELAEAEE E LEELAEELL E ALRAAAELAAQLEELEEA E EALLE R LERLE E ELEELEEAL A ELEEEEE E EEEALEEA 447
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 253 A K E AER hpgsprrelpyasgagdasdhsgsp EQQLD E KDARRFQLKIA E LSAIIRK L EDRNAL L S E ERNE LL KR L REAES 332
Cdd:COG1196 448 A E E EAE ------------------------- LEEEE E ALLELLAELLE E AALLEAA L AELLEE L A E AAAR LL LL L EAEAD 502
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 333 QYKP L LDKNKR L TRKNEDLSHTLRRIESKLKFVTQENI E MRQR A GIIRR pssl NDL D QSQDERE I DF LK LQIVEQQNL id 412
Cdd:COG1196 503 YEGF L EGVKAA L LLAGLRGLAGAVAVLIGVEAAYEAAL E AALA A ALQNI ---- VVE D DEVAAAA I EY LK AAKAGRATF -- 576
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 413 elsktletagyvksv L ER DK LLRYRKQRKKM A KLPKKPV V VETFFGYD E EASLESDGSSISYQTDRTD qtpctp EDDLEE 492
Cdd:COG1196 577 --------------- L PL DK IRARAALAAAL A RGAIGAA V DLVASDLR E ADARYYVLGDTLLGRTLVA ------ ARLEAA 635
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 493 GMAKEETEL R F R QL T M E YQALQRAYA L LQEQVGGT L D A ER E VKTREQLQ AE IQRAQTRVEDLEKALA E QGQDMKWIE E KQ 572
Cdd:COG1196 636 LRRAVTLAG R L R EV T L E GEGGSAGGS L TGGSRREL L A A LL E AEAELEEL AE RLAEEELELEEALLAE E EEERELAEA E EE 715
570 580 590 600
....*....|....*....|....*....|....*....|....*...
gi 1907184480 573 A L YRRNQ E LVEKIKQMETE E AR L KHEVQDAKDQN E LLEFRIL E LEER E 620
Cdd:COG1196 716 R L EEELE E EALEEQLEAER E EL L EELLEEEELLE E EALEELP E PPDL E 763
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
8-825
1.47e-07
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 55.45
E-value: 1.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 8 S RA K GDKA ET LAA L QAAN E E L r AK L T DI ------ Q IELQQEKSKVSKVER E KSQ EL KQV --------- R E HEQRKHAVLV 72
Cdd:TIGR02168 168 S KY K ERRK ET ERK L ERTR E N L - DR L E DI lneler Q LKSLERQAEKAERYK E LKA EL REL elallvlrl E E LREELEELQE 246
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 73 TELKTKLHE E KMKELQAVR E AL L RQHEA E LLRVIKIKDNENQR L Q AL L N TLRDGAPD K VKTVLLCEAK E EAKKGF E VEKV 152
Cdd:TIGR02168 247 ELKEAEEEL E ELTAELQEL E EK L EELRL E VSELEEEIEELQKE L Y AL A N EISRLEQQ K QILRERLANL E RQLEEL E AQLE 326
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 153 KMQQEIS EL KGAKKQV EE A L TMV iq ADKIKAA E IR svyhlh Q EE ITRIKK E C E REIRR L M E EIRFKDRA V FV LE RELGVQ 232
Cdd:TIGR02168 327 ELESKLD EL AEELAEL EE K L EEL -- KEELESL E AE ------ L EE LEAELE E L E SRLEE L E E QLETLRSK V AQ LE LQIASL 398
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 233 AGHAQ RL QLQK E A L DEQLSQAKEAER hpgsprrelpyasgagdasdhsg SPEQQ L D E KDARRF Q LKIA EL SAIIRK L EDR 312
Cdd:TIGR02168 399 NNEIE RL EARL E R L EDRRERLQQEIE ----------------------- ELLKK L E E AELKEL Q AELE EL EEELEE L QEE 455
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 313 NAL L S E ERN EL LKR L R EAE SQYKPLLDKNKR L TRKNED L SHTLRRI E SKLKF V TQENIEMRQRA GI IRR ----------- 381
Cdd:TIGR02168 456 LER L E E ALE EL REE L E EAE QALDAAERELAQ L QARLDS L ERLQENL E GFSEG V KALLKNQSGLS GI LGV lselisvdegy 535
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 382 -------- PSS L NDL --- DQSQDERE I D FLK ------------ LQ I VEQQNLIDELSKTLETA G YVKSVLERD K L lr YR K 438
Cdd:TIGR02168 536 eaaieaal GGR L QAV vve NLNAAKKA I A FLK qnelgrvtflpl DS I KGTEIQGNDREILKNIE G FLGVAKDLV K F -- DP K 613
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 439 Q RK KMAK L PKKPV VV ETFFGYD E E A SLE -------------- SD G SS I SYQTDR T DQTPCTPEDDL EE GMA K - EE T E LRF 503
Cdd:TIGR02168 614 L RK ALSY L LGGVL VV DDLDNAL E L A KKL rpgyrivtldgdlv RP G GV I TGGSAK T NSSILERRREI EE LEE K i EE L E EKI 693
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 504 RQ L TMEYQA L QRAYAL L Q E QVGGTLDAER E VKTR - EQ L QAEIQ R AQTR VE D LE KAL A EQGQDMKWI E EKQALYR - R NQ E L 581
Cdd:TIGR02168 694 AE L EKALAE L RKELEE L E E ELEQLRKELE E LSRQ i SA L RKDLA R LEAE VE Q LE ERI A QLSKELTEL E AEIEELE e R LE E A 773
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 582 V E KIKQM E T E EAR L KHEVQDA K DQNEL L EFRIL EL EERERK spainf HHTPFVDGKSP L QVYCEAEGV T DILVTE L MKKL 661
Cdd:TIGR02168 774 E E ELAEA E A E IEE L EAQIEQL K EELKA L REALD EL RAELTL ------ LNEEAANLRER L ESLERRIAA T ERRLED L EEQI 847
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 662 DI L GDNAV S N ltnee QVVVIQARTVLTLA E KW L QRIEETESA L QRKMVD L E SE K E LF S KQKGY L DEELDYRKQA L DQAHK 741
Cdd:TIGR02168 848 EE L SEDIE S L ----- AAEIEELEELIEEL E SE L EALLNERAS L EEALAL L R SE L E EL S EELRE L ESKRSELRRE L EELRE 922
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 742 HILE LE AM L YDALQQEAG ak VA E L LSEE EREK L KV A VEQWKRQVMS -- E L R E R DAQILRERM EL LQI --- A QQRIK EL E E 816
Cdd:TIGR02168 923 KLAQ LE LR L EGLEVRIDN -- LQ E R LSEE YSLT L EE A EALENKIEDD ee E A R R R LKRLENKIK EL GPV nla A IEEYE EL K E 1000
....*....
gi 1907184480 817 R IETQKR Q I 825
Cdd:TIGR02168 1001 R YDFLTA Q K 1009
SMC_N
pfam02463 RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ...
6-819
2.53e-05
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain]
Cd Length: 1161
Bit Score: 48.04
E-value: 2.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 6 AGSR A K GD K A E T L AA L QAAN E E L RAKLT D IQIELQ QE KS kv S K VERE K SQ E LK Q VR E HEQRKHAV L VTELKT KL H EE KMK 85
Cdd:pfam02463 163 AGSR L K RK K K E A L KK L IEET E N L AELII D LEELKL QE LK -- L K EQAK K AL E YY Q LK E KLELEEEY L LYLDYL KL N EE RID 240
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 86 E LQ AVREALLRQH E AELLRVI K IKDNEN Q R L QALLNTLRDGAPDKVKTV LL CEAK EE A K KGFEVEKVKMQQEISE LK GAK 165
Cdd:pfam02463 241 L LQ ELLRDEQEEI E SSKQEIE K EEEKLA Q V L KENKEEEKEKKLQEEELK LL AKEE EE L K SELLKLERRKVDDEEK LK ESE 320
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 166 K QVEE A L tmviqa DKI K AAEIRSVYHLHQEEITR IK K E C E R E IRRLM E EIRF K DRA vf VL E RE L GVQAGHAQ RL QLQKEA 245
Cdd:pfam02463 321 K EKKK A E ------ KEL K KEKEEIEELEKELKELE IK R E A E E E EEEEL E KLQE K LEQ -- LE E EL L AKKKLESE RL SSAAKL 392
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 246 LD E Q L SQAK E A E RHPGSPRRELPYASGAGDASDHSGSPEQQLD E KDARRF Q L K IA E LSAIIR K L E DRNALLSE E R n ELLK 325
Cdd:pfam02463 393 KE E E L ELKS E E E KEAQLLLELARQLEDLLKEEKKEELEILEEE E ESIELK Q G K LT E EKEELE K Q E LKLLKDEL E L - KKSE 471
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 326 R L REAESQY K PLLDKNKR L T R KNEDLSHTLR --- R IES K LKFVTQENIEMRQRAGIIR R PSS L NDLDQSQD ------- ER 395
Cdd:pfam02463 472 D L LKETQLV K LQEQLELL L S R QKLEERSQKE ska R SGL K VLLALIKDGVGGRIISAHG R LGD L GVAVENYK vaistav IV 551
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 396 E IDFLKLQIV E Q Q N L IDE L SKTLET A GYVKSVLERD KL LRYRKQRKKMAKLPKKPVVVETFFGY DE EASLESDGSS I SYQ 475
Cdd:pfam02463 552 E VSATADEVE E R Q K L VRA L TELPLG A RKLRLLIPKL KL PLKSIAVLEIDPILNLAQLDKATLEA DE DDKRAKVVEG I LKD 631
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 476 T DR T DQTPCTPEDDLEEGMAKEET E LRFRQLTMEYQALQRAYA LL QE Q VGGTLDAEREV K TREQLQAE - I QRAQT R VEDL 554
Cdd:pfam02463 632 T EL T KLKESAKAKESGLRKGVSLE E GLAEKSEVKASLSELTKE LL EI Q ELQEKAESELA K EEILRRQL e I KKKEQ R EKEE 711
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 555 E K A L AEQGQDMKWIEEKQ A LYRR N Q EL VE - K I K QM E T EE ARL K HEVQDAKDQN E LL E FRIL E L E ER E RKSPAINFHHTPF 633
Cdd:pfam02463 712 L K K L KLEAEELLADRVQE A QDKI N E EL KL l K Q K ID E E EE EEE K SRLKKEEKEE E KS E LSLK E K E LA E EREKTEKLKVEEE 791
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 634 VDG K SPL Q VYCEAEGVTDILVTELMKKLDI L GDNAVSNLTN EE QVVVIQARTVLTLA EK WLQRIE E TESALQR K MVD L ES 713
Cdd:pfam02463 792 KEE K LKA Q EEELRALEEELKEEAELLEEEQ L LIEQEEKIKE EE LEELALELKEEQKL EK LAEEEL E RLEEEIT K EEL L QE 871
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 714 EKE lfsk QKGY L D E ELDYRKQALDQAHKHILEL E A mly DALQ Q EAGAKVAELLSE EER E K LKVAVEQWKRQVMS EL RERD 793
Cdd:pfam02463 872 LLL ---- KEEE L E E QKLKDELESKEEKEKEEKK E L --- EEES Q KLNLLEEKENEI EER I K EEAEILLKYEEEPE EL LLEE 944
810 820
....*....|....*....|....*.
gi 1907184480 794 A QILRERMELLQIAQQ R I K E L EERI E 819
Cdd:pfam02463 945 A DEKEKEENNKEEEEE R N K R L LLAK E 970
PTZ00121
PTZ00121 MAEBL; Provisional
3-381
1.10e-04
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 46.29
E-value: 1.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 3 KK G A GSRA K G D K A ETL A ALQAANE E LRA K LTDIQ iel QQ E KS K VSKV E RE K SQ E L K QVR E h E QR K havl VT E L K T K LH E E 82
Cdd:PTZ00121 1424 KK K A EEKK K A D E A KKK A EEAKKAD E AKK K AEEAK --- KA E EA K KKAE E AK K AD E A K KKA E - E AK K ---- AD E A K K K AE E A 1495
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 83 K m K ELQAVRE A LLRQHE A ELLR viki K DN E NQRLQALLNTLRDGAP D KV K TVLLCEAKE E A KK GF E VE K VKMQQEIS E L K 162
Cdd:PTZ00121 1496 K - K KADEAKK A AEAKKK A DEAK ---- K AE E AKKADEAKKAEEAKKA D EA K KAEEKKKAD E L KK AE E LK K AEEKKKAE E A K 1570
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 163 G A KKQVEE AL TMVIQ A D K IKA A E I RS V YH L HQ EE ITRIKK E C -- ER E IRRLM EE IRFKDRAVFVL E RELGVQ A GHAQRLQ 240
Cdd:PTZ00121 1571 K A EEDKNM AL RKAEE A K K AEE A R I EE V MK L YE EE KKMKAE E A kk AE E AKIKA EE LKKAEEEKKKV E QLKKKE A EEKKKAE 1650
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 241 LQ K E A LD E QLSQ A K E AERHPGSPRRE lpyasgagdasdhsg SP E QQLD E K D ARRFQLKIAELSAIIR K L E DRNALLS EE R 320
Cdd:PTZ00121 1651 EL K K A EE E NKIK A A E EAKKAEEDKKK --------------- AE E AKKA E E D EKKAAEALKKEAEEAK K A E ELKKKEA EE K 1715
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907184480 321 NE l LKR L RE AE SQY K PLLDKN K RLTRKNEDLSHTLRRI E SKL K FVTQENI E MRQR A GI IR R 381
Cdd:PTZ00121 1716 KK - AEE L KK AE EEN K IKAEEA K KEAEEDKKKAEEAKKD E EEK K KIAHLKK E EEKK A EE IR K 1775
YhaN
COG4717 Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
489-825
7.80e-03
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain]
Cd Length: 641
Bit Score: 39.75
E-value: 7.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 489 D L E E GMA K E E TE L RFRQ L TM E YQ AL QRAY A L L Q E QVG gtl DA E REVKTREQ L QA E IQRAQTRVED L EKA L A E QGQDMKWI 568
Cdd:COG4717 113 E L R E ELE K L E KL L QLLP L YQ E LE AL EAEL A E L P E RLE --- EL E ERLEELRE L EE E LEELEAELAE L QEE L E E LLEQLSLA 189
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 569 E E KQA -- L YRRNQ EL VEKIKQM E T E EARLKH E VQDAKDQN E L LE FRILELEER ER KSP A INF hh TPFVDGKSP L QVYCEA 646
Cdd:COG4717 190 T E EEL qd L AEELE EL QQRLAEL E E E LEEAQE E LEELEEEL E Q LE NELEAAALE ER LKE A RLL -- LLIAAALLA L LGLGGS 267
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 647 EGVTDILVTELMKKLDI L GDNAVSN L TN E EQVVVIQ A RTVLT L AEKWLQRI EE T E SA L QRKMVDLESEK E LFSKQKGYLD 726
Cdd:COG4717 268 LLSLILTIAGVLFLVLG L LALLFLL L AR E KASLGKE A EELQA L PALEELEE EE L E EL L AALGLPPDLSP E ELLELLDRIE 347
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 727 E ELDYRKQ A LDQAHKHI LE LEAMLYD AL QQ EAG AKVA E L L SE ----- EE REK LK VAV E QWKR Q VMSE L R E R ---- D A QIL 797
Cdd:COG4717 348 E LQELLRE A EELEEELQ LE ELEQEIA AL LA EAG VEDE E E L RA aleqa EE YQE LK EEL E ELEE Q LEEL L G E L eell E A LDE 427
330 340
....*....|....*....|....*...
gi 1907184480 798 R E RM E L L QIAQQRIK ELEE RI E TQKRQI 825
Cdd:COG4717 428 E E LE E E L EELEEELE ELEE EL E ELREEL 455
Name
Accession
Description
Interval
E-value
JAKMIP_CC3
pfam16034 JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP ...
429-627
7.90e-89
JAKMIP CC3 domain; This domain is found at the C-terminus of proteins belonging to the JAKMIP family (Janus kinase and microtubule-interacting proteins) and is predicted to be a coiled coil. It interacts with the Janus family kinases Tyk2 and Jak1.
Pssm-ID: 464986 [Multi-domain]
Cd Length: 199
Bit Score: 279.46
E-value: 7.90e-89
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 429 ERDKL L R Y RKQR K K MA K LPKKPV VVETFFGYDEEAS LE S DG SS I SY Q TDRTD Q TP C TP ED DL E EG M A K EE T ELRFRQLT M 508
Cdd:pfam16034 1 ERDKL I R A RKQR R K EK K KKLRDM VVETFFGYDEEAS VD S ET SS L SY N TDRTD S TP A TP DE DL D EG V A A EE A ELRFRQLT R 80
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 509 EYQALQRAYALLQEQ V GGTLDAERE V KTREQLQAE IQ RAQ T R V EDLE K ALA EQ GQD M KW I EEKQAL Y RRNQELVEKI KQ M 588
Cdd:pfam16034 81 EYQALQRAYALLQEQ S GGTLDAERE A KTREQLQAE LR RAQ S R I EDLE S ALA QK GQD S KW V EEKQAL I RRNQELVEKI RI M 160
170 180 190
....*....|....*....|....*....|....*....
gi 1907184480 589 E T EE A RLK H E V QDA K DQNELLEFRILELEERER K SPAIN 627
Cdd:pfam16034 161 E Q EE G RLK N E I QDA R DQNELLEFRILELEERER R SPAIN 199
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
13-620
9.90e-09
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 59.18
E-value: 9.90e-09
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 13 D KAE TLAA L QAANE EL R A K L TDIQIELQQEKSKVSKV E R E KSQELKQVR E H E QRKHAVLVT EL KTK L H E EK m K EL QAVRE 92
Cdd:COG1196 210 E KAE RYRE L KEELK EL E A E L LLLKLRELEAELEELEA E L E ELEAELEEL E A E LAELEAELE EL RLE L E E LE - L EL EEAQA 288
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 93 A l LRQHE AEL L R VIKIKDNENQ R LQA L LNT L RDGAPDKVKTVLLC E AK EE AKKGF E V E KVKMQQ E IS E LKGAKKQV EEAL 172
Cdd:COG1196 289 E - EYELL AEL A R LEQDIARLEE R RRE L EER L EELEEELAELEEEL E EL EE ELEEL E E E LEEAEE E LE E AEAELAEA EEAL 367
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 173 TMVIQADKIKAA E IRSVYHLHQ E EITRIKKECEREIRRLME E IRFKD R AVFVL E RELGVQAGH A QRLQLQK E ALDEQLSQ 252
Cdd:COG1196 368 LEAEAELAEAEE E LEELAEELL E ALRAAAELAAQLEELEEA E EALLE R LERLE E ELEELEEAL A ELEEEEE E EEEALEEA 447
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 253 A K E AER hpgsprrelpyasgagdasdhsgsp EQQLD E KDARRFQLKIA E LSAIIRK L EDRNAL L S E ERNE LL KR L REAES 332
Cdd:COG1196 448 A E E EAE ------------------------- LEEEE E ALLELLAELLE E AALLEAA L AELLEE L A E AAAR LL LL L EAEAD 502
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 333 QYKP L LDKNKR L TRKNEDLSHTLRRIESKLKFVTQENI E MRQR A GIIRR pssl NDL D QSQDERE I DF LK LQIVEQQNL id 412
Cdd:COG1196 503 YEGF L EGVKAA L LLAGLRGLAGAVAVLIGVEAAYEAAL E AALA A ALQNI ---- VVE D DEVAAAA I EY LK AAKAGRATF -- 576
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 413 elsktletagyvksv L ER DK LLRYRKQRKKM A KLPKKPV V VETFFGYD E EASLESDGSSISYQTDRTD qtpctp EDDLEE 492
Cdd:COG1196 577 --------------- L PL DK IRARAALAAAL A RGAIGAA V DLVASDLR E ADARYYVLGDTLLGRTLVA ------ ARLEAA 635
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 493 GMAKEETEL R F R QL T M E YQALQRAYA L LQEQVGGT L D A ER E VKTREQLQ AE IQRAQTRVEDLEKALA E QGQDMKWIE E KQ 572
Cdd:COG1196 636 LRRAVTLAG R L R EV T L E GEGGSAGGS L TGGSRREL L A A LL E AEAELEEL AE RLAEEELELEEALLAE E EEERELAEA E EE 715
570 580 590 600
....*....|....*....|....*....|....*....|....*...
gi 1907184480 573 A L YRRNQ E LVEKIKQMETE E AR L KHEVQDAKDQN E LLEFRIL E LEER E 620
Cdd:COG1196 716 R L EEELE E EALEEQLEAER E EL L EELLEEEELLE E EALEELP E PPDL E 763
SMC_prok_B
TIGR02168 chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of ...
8-825
1.47e-07
chromosome segregation protein SMC, common bacterial type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. This family represents the SMC protein of most bacteria. The smc gene is often associated with scpB (TIGR00281) and scpA genes, where scp stands for segregation and condensation protein. SMC was shown (in Caulobacter crescentus) to be induced early in S phase but present and bound to DNA throughout the cell cycle. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274008 [Multi-domain]
Cd Length: 1179
Bit Score: 55.45
E-value: 1.47e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 8 S RA K GDKA ET LAA L QAAN E E L r AK L T DI ------ Q IELQQEKSKVSKVER E KSQ EL KQV --------- R E HEQRKHAVLV 72
Cdd:TIGR02168 168 S KY K ERRK ET ERK L ERTR E N L - DR L E DI lneler Q LKSLERQAEKAERYK E LKA EL REL elallvlrl E E LREELEELQE 246
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 73 TELKTKLHE E KMKELQAVR E AL L RQHEA E LLRVIKIKDNENQR L Q AL L N TLRDGAPD K VKTVLLCEAK E EAKKGF E VEKV 152
Cdd:TIGR02168 247 ELKEAEEEL E ELTAELQEL E EK L EELRL E VSELEEEIEELQKE L Y AL A N EISRLEQQ K QILRERLANL E RQLEEL E AQLE 326
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 153 KMQQEIS EL KGAKKQV EE A L TMV iq ADKIKAA E IR svyhlh Q EE ITRIKK E C E REIRR L M E EIRFKDRA V FV LE RELGVQ 232
Cdd:TIGR02168 327 ELESKLD EL AEELAEL EE K L EEL -- KEELESL E AE ------ L EE LEAELE E L E SRLEE L E E QLETLRSK V AQ LE LQIASL 398
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 233 AGHAQ RL QLQK E A L DEQLSQAKEAER hpgsprrelpyasgagdasdhsg SPEQQ L D E KDARRF Q LKIA EL SAIIRK L EDR 312
Cdd:TIGR02168 399 NNEIE RL EARL E R L EDRRERLQQEIE ----------------------- ELLKK L E E AELKEL Q AELE EL EEELEE L QEE 455
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 313 NAL L S E ERN EL LKR L R EAE SQYKPLLDKNKR L TRKNED L SHTLRRI E SKLKF V TQENIEMRQRA GI IRR ----------- 381
Cdd:TIGR02168 456 LER L E E ALE EL REE L E EAE QALDAAERELAQ L QARLDS L ERLQENL E GFSEG V KALLKNQSGLS GI LGV lselisvdegy 535
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 382 -------- PSS L NDL --- DQSQDERE I D FLK ------------ LQ I VEQQNLIDELSKTLETA G YVKSVLERD K L lr YR K 438
Cdd:TIGR02168 536 eaaieaal GGR L QAV vve NLNAAKKA I A FLK qnelgrvtflpl DS I KGTEIQGNDREILKNIE G FLGVAKDLV K F -- DP K 613
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 439 Q RK KMAK L PKKPV VV ETFFGYD E E A SLE -------------- SD G SS I SYQTDR T DQTPCTPEDDL EE GMA K - EE T E LRF 503
Cdd:TIGR02168 614 L RK ALSY L LGGVL VV DDLDNAL E L A KKL rpgyrivtldgdlv RP G GV I TGGSAK T NSSILERRREI EE LEE K i EE L E EKI 693
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 504 RQ L TMEYQA L QRAYAL L Q E QVGGTLDAER E VKTR - EQ L QAEIQ R AQTR VE D LE KAL A EQGQDMKWI E EKQALYR - R NQ E L 581
Cdd:TIGR02168 694 AE L EKALAE L RKELEE L E E ELEQLRKELE E LSRQ i SA L RKDLA R LEAE VE Q LE ERI A QLSKELTEL E AEIEELE e R LE E A 773
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 582 V E KIKQM E T E EAR L KHEVQDA K DQNEL L EFRIL EL EERERK spainf HHTPFVDGKSP L QVYCEAEGV T DILVTE L MKKL 661
Cdd:TIGR02168 774 E E ELAEA E A E IEE L EAQIEQL K EELKA L REALD EL RAELTL ------ LNEEAANLRER L ESLERRIAA T ERRLED L EEQI 847
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 662 DI L GDNAV S N ltnee QVVVIQARTVLTLA E KW L QRIEETESA L QRKMVD L E SE K E LF S KQKGY L DEELDYRKQA L DQAHK 741
Cdd:TIGR02168 848 EE L SEDIE S L ----- AAEIEELEELIEEL E SE L EALLNERAS L EEALAL L R SE L E EL S EELRE L ESKRSELRRE L EELRE 922
810 820 830 840 850 860 870 880
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 742 HILE LE AM L YDALQQEAG ak VA E L LSEE EREK L KV A VEQWKRQVMS -- E L R E R DAQILRERM EL LQI --- A QQRIK EL E E 816
Cdd:TIGR02168 923 KLAQ LE LR L EGLEVRIDN -- LQ E R LSEE YSLT L EE A EALENKIEDD ee E A R R R LKRLENKIK EL GPV nla A IEEYE EL K E 1000
....*....
gi 1907184480 817 R IETQKR Q I 825
Cdd:TIGR02168 1001 R YDFLTA Q K 1009
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
15-595
9.34e-07
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 52.63
E-value: 9.34e-07
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 15 AET LA A L Q A AN EELR AK L TDIQI EL QQEKSKVSKVER E KSQELKQVREH E Q R KHAVLVTELKTKLHEEKMK E LQAVR E AL 94
Cdd:COG1196 259 EAE LA E L E A EL EELR LE L EELEL EL EEAQAEEYELLA E LARLEQDIARL E E R RRELEERLEELEEELAELE E ELEEL E EE 338
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 95 L RQH E A EL LRVIKIKDNENQR L QALLNT L RDGAPDKVKTVLLC E AKE E AKKGFEVEKVKMQQEIS EL KG A KKQVE E A L TM 174
Cdd:COG1196 339 L EEL E E EL EEAEEELEEAEAE L AEAEEA L LEAEAELAEAEEEL E ELA E ELLEALRAAAELAAQLE EL EE A EEALL E R L ER 418
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 175 VIQADKIKAAEIRSVYHLHQ EE ITRIKKEC E R E IRRLM EE IRFKDRAVFV LE RELGVQ A GH A QR L QLQK EA LDEQ L SQAK 254
Cdd:COG1196 419 LEEELEELEEALAELEEEEE EE EEALEEAA E E E AELEE EE EALLELLAEL LE EAALLE A AL A EL L EELA EA AARL L LLLE 498
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 255 EAERHP G SPRRELPYASG AG DASDHSGSPEQQLD E KDARRFQL ki A E L S A IIRKLEDRNALLSEERN E L LK RLREAESQY 334
Cdd:COG1196 499 AEADYE G FLEGVKAALLL AG LRGLAGAVAVLIGV E AAYEAALE -- A A L A A ALQNIVVEDDEVAAAAI E Y LK AAKAGRATF 576
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 335 K PL LDKNK R LTRKNEDLSHTLRRIESKLKFVTQ E NIEMRQRA G IIRRPSS L NDLDQSQDE R EIDF L KLQIV E QQNLIDEL 414
Cdd:COG1196 577 L PL DKIRA R AALAAALARGAIGAAVDLVASDLR E ADARYYVL G DTLLGRT L VAARLEAAL R RAVT L AGRLR E VTLEGEGG 656
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 415 S KTLETA G YVKSV L ERDK L LRYRKQRKKMAK L pkkpvvvetffg YD EE AS LE SDGSSISYQTDRTDQ tpctp EDDLEEGM 494
Cdd:COG1196 657 S AGGSLT G GSRRE L LAAL L EAEAELEELAER L ------------ AE EE LE LE EALLAEEEEERELAE ----- AEEERLEE 719
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 495 AK EE TE L RFRQLTMEYQA L QRAYALLQEQVGGT L DAER E VKTR E Q L QA E IQ R AQTRV E D L EK -- A LA eqgqdmkw IEE KQ 572
Cdd:COG1196 720 EL EE EA L EEQLEAEREEL L EELLEEEELLEEEA L EELP E PPDL E E L ER E LE R LEREI E A L GP vn L LA -------- IEE YE 791
570 580
....*....|....*....|...
gi 1907184480 573 A L YR R NQE L V E KIKQM E TEEAR L 595
Cdd:COG1196 792 E L EE R YDF L S E QREDL E EARET L 814
SMC_prok_A
TIGR02169 chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of ...
45-826
6.82e-06
chromosome segregation protein SMC, primarily archaeal type; SMC (structural maintenance of chromosomes) proteins bind DNA and act in organizing and segregating chromosomes for partition. SMC proteins are found in bacteria, archaea, and eukaryotes. It is found in a single copy and is homodimeric in prokaryotes, but six paralogs (excluded from this family) are found in eukarotes, where SMC proteins are heterodimeric. This family represents the SMC protein of archaea and a few bacteria (Aquifex, Synechocystis, etc); the SMC of other bacteria is described by TIGR02168. The N- and C-terminal domains of this protein are well conserved, but the central hinge region is skewed in composition and highly divergent. [Cellular processes, Cell division, DNA metabolism, Chromosome-associated proteins]
Pssm-ID: 274009 [Multi-domain]
Cd Length: 1164
Bit Score: 50.07
E-value: 6.82e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 45 KVSKVER EK S Q E L KQV R E he Q R KH A VLVTE L KTKLH E EKMK EL QAVR EAL L RQ H EA e LL R VIKIKDN E NQR L QALLNT L R 124
Cdd:TIGR02169 188 RLDLIID EK R Q Q L ERL R R -- E R EK A ERYQA L LKEKR E YEGY EL LKEK EAL E RQ K EA - IE R QLASLEE E LEK L TEEISE L E 264
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 125 DGAPDKVK tv LL C E AKEEA K KGF E V E KVKMQQE I S EL KG ---- AKKQVE E ALTMVIQ A DK i KA A EIRSVYHLHQE EI TRI 200
Cdd:TIGR02169 265 KRLEEIEQ -- LL E E LNKKI K DLG E E E QLRVKEK I G EL EA eias LERSIA E KERELED A EE - RL A KLEAEIDKLLA EI EEL 341
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 201 KK E C E R E IR R --- L M EE IRFKDRAVFV L ER EL GVQAGHAQRLQLQKEALD E Q L SQA K E aerhpgsprrelpyasgag DAS 277
Cdd:TIGR02169 342 ER E I E E E RK R rdk L T EE YAELKEELED L RA EL EEVDKEFAETRDELKDYR E K L EKL K R ------------------- EIN 402
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 278 DHSGSPEQQLD E K da R R FQLKI A E L S A I I RKL E DRNAL L S EE RNELLKRLREA E SQYKP L LDKNKRLTRKNE DL SHTLR R 357
Cdd:TIGR02169 403 ELKRELDRLQE E L -- Q R LSEEL A D L N A A I AGI E AKINE L E EE KEDKALEIKKQ E WKLEQ L AADLSKYEQELY DL KEEYD R 480
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 358 I E SK L KFVTQ E NI E MRQR A GIIRRPSSLNDLDQSQDERE I DFLKLQIVEQQNLIDELSKTL E T A G ------- Y V KSVLER 430
Cdd:TIGR02169 481 V E KE L SKLQR E LA E AEAQ A RASEERVRGGRAVEEVLKAS I QGVHGTVAQLGSVGERYATAI E V A A gnrlnnv V V EDDAVA 560
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 431 DKLLRYR K Q RK kmaklpkkp VVVE TF FGYDEEASLES D G S SI S --- YQTDRT D QTPCT P E --------------- D D L E E 492
Cdd:TIGR02169 561 KEAIELL K R RK --------- AGRA TF LPLNKMRDERR D L S IL S edg VIGFAV D LVEFD P K yepafkyvfgdtlvv E D I E A 631
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 493 G mak EETELRF R QL T M E YQALQRAY A L lqeq V GG TLDAEREVKTREQLQ AE I QR AQT R V E D L EKA L AEQGQDMKW IE - EK 571
Cdd:TIGR02169 632 A --- RRLMGKY R MV T L E GELFEKSG A M ---- T GG SRAPRGGILFSRSEP AE L QR LRE R L E G L KRE L SSLQSELRR IE n RL 704
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 572 QA L YRRNQELVE KI KQM E T E EAR L KH E VQDA K DQN E L LE FRILE LE ER erkspainfhhtp FVDG KS P L QVYCEAEGVTD 651
Cdd:TIGR02169 705 DE L SQELSDASR KI GEI E K E IEQ L EQ E EEKL K ERL E E LE EDLSS LE QE ------------- IENV KS E L KELEARIEELE 771
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 652 ILVTE L MKK L dilgd N AVSNLTNEEQVVV IQA R tv L TLA E KWLQ RIE ETESALQR K MVD L ES EKE LFS K QKGY L D E ELDY 731
Cdd:TIGR02169 772 EDLHK L EEA L ----- N DLEARLSHSRIPE IQA E -- L SKL E EEVS RIE ARLREIEQ K LNR L TL EKE YLE K EIQE L Q E QRID 844
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 732 R K QALDQAH K H I LE L EAMLYDALQQEAGAKV A ELLS E EEREK LK VAVEQWKR Q v MS EL RER daqi LR E RMELLQIAQQ R I 811
Cdd:TIGR02169 845 L K EQIKSIE K E I EN L NGKKEELEEELEELEA A LRDL E SRLGD LK KERDELEA Q - LR EL ERK ---- IE E LEAQIEKKRK R L 919
810
....*....|....*
gi 1907184480 812 K EL EERI E TQKRQIK 826
Cdd:TIGR02169 920 S EL KAKL E ALEEELS 934
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
138-622
8.83e-06
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 49.55
E-value: 8.83e-06
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 138 E AK E EAKKGF E V E KVKMQQ E IS EL KGAKKQV E EA L T mviqadkikaa E IRSVYHLHQE E IT R IKKECE R EIR R LM E EIRF 217
Cdd:COG1196 249 E EL E AELEEL E A E LAELEA E LE EL RLELEEL E LE L E ----------- E AQAEEYELLA E LA R LEQDIA R LEE R RR E LEER 317
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 218 KDRAVFV L ERELGVQAGHAQR L QLQK E A L D E QLSQAK EAE RHPGSPRRE L PY A sgagdasdhsgsp E QQ L D E KDARRFQ L 297
Cdd:COG1196 318 LEELEEE L AELEEELEELEEE L EELE E E L E E AEEELE EAE AELAEAEEA L LE A ------------- E AE L A E AEEELEE L 384
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 298 KIAE L S A IIRKL E DRNA L LSE E RN E -- LL K RL REA E SQYKP L LDKNKR L TRKN E DLSHT L RRIESKLKFVTQ E NIEMRQR 375
Cdd:COG1196 385 AEEL L E A LRAAA E LAAQ L EEL E EA E ea LL E RL ERL E EELEE L EEALAE L EEEE E EEEEA L EEAAEEEAELEE E EEALLEL 464
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 376 AGIIRRPSS L NDLDQSQDER E IDFLKLQIVEQQNLID elsktl ETA G YVKS V LERDK L LRY R KQRKKM A K L PKKPVVV E T 455
Cdd:COG1196 465 LAELLEEAA L LEAALAELLE E LAEAAARLLLLLEAEA ------ DYE G FLEG V KAALL L AGL R GLAGAV A V L IGVEAAY E A 538
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 456 ffgy DE EA S L ESDGSS I SYQT D RTDQTPCTPEDDLEE G -------------- MAKEETELRFRQLTMEYQ A LQRAY A LLQ 521
Cdd:COG1196 539 ---- AL EA A L AAALQN I VVED D EVAAAAIEYLKAAKA G ratflpldkirara ALAAALARGAIGAAVDLV A SDLRE A DAR 614
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 522 EQ V G G TLDAE R EVKTREQLQ A EIQRAQTRVEDL E KA L AEQ G QDMKWIEEKQALYRRNQE L V E KIKQM E TEEA RL KH E VQD 601
Cdd:COG1196 615 YY V L G DTLLG R TLVAARLEA A LRRAVTLAGRLR E VT L EGE G GSAGGSLTGGSRRELLAA L L E AEAEL E ELAE RL AE E ELE 694
490 500
....*....|....*....|.
gi 1907184480 602 AKDQNELL E FRIL EL E E R E RK 622
Cdd:COG1196 695 LEEALLAE E EEER EL A E A E EE 715
SMC_N
pfam02463 RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The ...
6-819
2.53e-05
RecF/RecN/SMC N terminal domain; This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination.
Pssm-ID: 426784 [Multi-domain]
Cd Length: 1161
Bit Score: 48.04
E-value: 2.53e-05
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 6 AGSR A K GD K A E T L AA L QAAN E E L RAKLT D IQIELQ QE KS kv S K VERE K SQ E LK Q VR E HEQRKHAV L VTELKT KL H EE KMK 85
Cdd:pfam02463 163 AGSR L K RK K K E A L KK L IEET E N L AELII D LEELKL QE LK -- L K EQAK K AL E YY Q LK E KLELEEEY L LYLDYL KL N EE RID 240
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 86 E LQ AVREALLRQH E AELLRVI K IKDNEN Q R L QALLNTLRDGAPDKVKTV LL CEAK EE A K KGFEVEKVKMQQEISE LK GAK 165
Cdd:pfam02463 241 L LQ ELLRDEQEEI E SSKQEIE K EEEKLA Q V L KENKEEEKEKKLQEEELK LL AKEE EE L K SELLKLERRKVDDEEK LK ESE 320
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 166 K QVEE A L tmviqa DKI K AAEIRSVYHLHQEEITR IK K E C E R E IRRLM E EIRF K DRA vf VL E RE L GVQAGHAQ RL QLQKEA 245
Cdd:pfam02463 321 K EKKK A E ------ KEL K KEKEEIEELEKELKELE IK R E A E E E EEEEL E KLQE K LEQ -- LE E EL L AKKKLESE RL SSAAKL 392
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 246 LD E Q L SQAK E A E RHPGSPRRELPYASGAGDASDHSGSPEQQLD E KDARRF Q L K IA E LSAIIR K L E DRNALLSE E R n ELLK 325
Cdd:pfam02463 393 KE E E L ELKS E E E KEAQLLLELARQLEDLLKEEKKEELEILEEE E ESIELK Q G K LT E EKEELE K Q E LKLLKDEL E L - KKSE 471
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 326 R L REAESQY K PLLDKNKR L T R KNEDLSHTLR --- R IES K LKFVTQENIEMRQRAGIIR R PSS L NDLDQSQD ------- ER 395
Cdd:pfam02463 472 D L LKETQLV K LQEQLELL L S R QKLEERSQKE ska R SGL K VLLALIKDGVGGRIISAHG R LGD L GVAVENYK vaistav IV 551
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 396 E IDFLKLQIV E Q Q N L IDE L SKTLET A GYVKSVLERD KL LRYRKQRKKMAKLPKKPVVVETFFGY DE EASLESDGSS I SYQ 475
Cdd:pfam02463 552 E VSATADEVE E R Q K L VRA L TELPLG A RKLRLLIPKL KL PLKSIAVLEIDPILNLAQLDKATLEA DE DDKRAKVVEG I LKD 631
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 476 T DR T DQTPCTPEDDLEEGMAKEET E LRFRQLTMEYQALQRAYA LL QE Q VGGTLDAEREV K TREQLQAE - I QRAQT R VEDL 554
Cdd:pfam02463 632 T EL T KLKESAKAKESGLRKGVSLE E GLAEKSEVKASLSELTKE LL EI Q ELQEKAESELA K EEILRRQL e I KKKEQ R EKEE 711
570 580 590 600 610 620 630 640
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 555 E K A L AEQGQDMKWIEEKQ A LYRR N Q EL VE - K I K QM E T EE ARL K HEVQDAKDQN E LL E FRIL E L E ER E RKSPAINFHHTPF 633
Cdd:pfam02463 712 L K K L KLEAEELLADRVQE A QDKI N E EL KL l K Q K ID E E EE EEE K SRLKKEEKEE E KS E LSLK E K E LA E EREKTEKLKVEEE 791
650 660 670 680 690 700 710 720
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 634 VDG K SPL Q VYCEAEGVTDILVTELMKKLDI L GDNAVSNLTN EE QVVVIQARTVLTLA EK WLQRIE E TESALQR K MVD L ES 713
Cdd:pfam02463 792 KEE K LKA Q EEELRALEEELKEEAELLEEEQ L LIEQEEKIKE EE LEELALELKEEQKL EK LAEEEL E RLEEEIT K EEL L QE 871
730 740 750 760 770 780 790 800
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 714 EKE lfsk QKGY L D E ELDYRKQALDQAHKHILEL E A mly DALQ Q EAGAKVAELLSE EER E K LKVAVEQWKRQVMS EL RERD 793
Cdd:pfam02463 872 LLL ---- KEEE L E E QKLKDELESKEEKEKEEKK E L --- EEES Q KLNLLEEKENEI EER I K EEAEILLKYEEEPE EL LLEE 944
810 820
....*....|....*....|....*.
gi 1907184480 794 A QILRERMELLQIAQQ R I K E L EERI E 819
Cdd:pfam02463 945 A DEKEKEENNKEEEEE R N K R L LLAK E 970
PTZ00121
PTZ00121 MAEBL; Provisional
3-381
1.10e-04
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 46.29
E-value: 1.10e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 3 KK G A GSRA K G D K A ETL A ALQAANE E LRA K LTDIQ iel QQ E KS K VSKV E RE K SQ E L K QVR E h E QR K havl VT E L K T K LH E E 82
Cdd:PTZ00121 1424 KK K A EEKK K A D E A KKK A EEAKKAD E AKK K AEEAK --- KA E EA K KKAE E AK K AD E A K KKA E - E AK K ---- AD E A K K K AE E A 1495
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 83 K m K ELQAVRE A LLRQHE A ELLR viki K DN E NQRLQALLNTLRDGAP D KV K TVLLCEAKE E A KK GF E VE K VKMQQEIS E L K 162
Cdd:PTZ00121 1496 K - K KADEAKK A AEAKKK A DEAK ---- K AE E AKKADEAKKAEEAKKA D EA K KAEEKKKAD E L KK AE E LK K AEEKKKAE E A K 1570
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 163 G A KKQVEE AL TMVIQ A D K IKA A E I RS V YH L HQ EE ITRIKK E C -- ER E IRRLM EE IRFKDRAVFVL E RELGVQ A GHAQRLQ 240
Cdd:PTZ00121 1571 K A EEDKNM AL RKAEE A K K AEE A R I EE V MK L YE EE KKMKAE E A kk AE E AKIKA EE LKKAEEEKKKV E QLKKKE A EEKKKAE 1650
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 241 LQ K E A LD E QLSQ A K E AERHPGSPRRE lpyasgagdasdhsg SP E QQLD E K D ARRFQLKIAELSAIIR K L E DRNALLS EE R 320
Cdd:PTZ00121 1651 EL K K A EE E NKIK A A E EAKKAEEDKKK --------------- AE E AKKA E E D EKKAAEALKKEAEEAK K A E ELKKKEA EE K 1715
330 340 350 360 370 380
....*....|....*....|....*....|....*....|....*....|....*....|.
gi 1907184480 321 NE l LKR L RE AE SQY K PLLDKN K RLTRKNEDLSHTLRRI E SKL K FVTQENI E MRQR A GI IR R 381
Cdd:PTZ00121 1716 KK - AEE L KK AE EEN K IKAEEA K KEAEEDKKKAEEAKKD E EEK K KIAHLKK E EEKK A EE IR K 1775
EnvC
COG4942 Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, ...
17-274
2.47e-04
Septal ring factor EnvC, activator of murein hydrolases AmiA and AmiB [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 443969 [Multi-domain]
Cd Length: 377
Bit Score: 44.37
E-value: 2.47e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 17 TL AA LQA A NE E LR A K L TDI Q I E LQQEKSKVSKVER E KSQE LKQ VREH E Q R kha VLVTELKTKLH E EKMKE L qavr EA L L R 96
Cdd:COG4942 14 AA AA QAD A AA E AE A E L EQL Q Q E IAELEKELAALKK E EKAL LKQ LAAL E R R --- IAALARRIRAL E QELAA L ---- EA E L A 86
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 97 QH E A E LLRVIKIKDNENQR L QA LL NT L - R D G APDKVKTV L LC E AKEE A kkgfevek V KMQ Q EISE L KG A KKQVE E A L TMV 175
Cdd:COG4942 87 EL E K E IAELRAELEAQKEE L AE LL RA L y R L G RQPPLALL L SP E DFLD A -------- V RRL Q YLKY L AP A RREQA E E L RAD 158
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 176 IQADKIKA AE IRS vyhl HQE E ITRIKK E C E R E IRR L MEEIRFKDRAVFV LE R EL GVQ A GHAQR LQ LQK E A L DEQLSQAKE 255
Cdd:COG4942 159 LAELAALR AE LEA ---- ERA E LEALLA E L E E E RAA L EALKAERQKLLAR LE K EL AEL A AELAE LQ QEA E E L EALIARLEA 234
250
....*....|....*....
gi 1907184480 256 AERHPGSPRRELPY A SGA G 274
Cdd:COG4942 235 EAAAAAERTPAAGF A ALK G 253
Smc
COG1196 Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning]; ...
284-826
7.11e-04
Chromosome segregation ATPase Smc [Cell cycle control, cell division, chromosome partitioning];
Pssm-ID: 440809 [Multi-domain]
Cd Length: 983
Bit Score: 43.39
E-value: 7.11e-04
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 284 E QQLD E KDARRFQLKIA EL SAIIRK LE DRNALLSE E RN ELL KR L REA E SQYKP L LDKNKR L TRKN E D L SHT L RRI E SK L K 363
Cdd:COG1196 254 E LEEL E AELAELEAELE EL RLELEE LE LELEEAQA E EY ELL AE L ARL E QDIAR L EERRRE L EERL E E L EEE L AEL E EE L E 333
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 364 FVTQ E NI E MRQRAGIIRRP ----- SS L NDLDQSQD E R E IDFLKLQIVEQQNLIDE L SKTLET A GYVKSVL E RDKLLRYRK 438
Cdd:COG1196 334 ELEE E LE E LEEELEEAEEE leeae AE L AEAEEALL E A E AELAEAEEELEELAEEL L EALRAA A ELAAQLE E LEEAEEALL 413
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 439 Q R KKMA klpkkpvvvetffgyd EE ASL E SDGSSISYQTDRTDQT pctp E DDL E EGMAKE E T E LRFRQ L TMEYQA L QRAY A 518
Cdd:COG1196 414 E R LERL ---------------- EE ELE E LEEALAELEEEEEEEE ---- E ALE E AAEEEA E L E EEEEA L LELLAE L LEEA A 473
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 519 LL QEQVGGT L DAER E VKT R EQ L QA E IQRAQ --------- TRVEDLEKA LA EQGQDMKWI E EKQALYRRNQELVEKIKQME 589
Cdd:COG1196 474 LL EAALAEL L EELA E AAA R LL L LL E AEADY egflegvka ALLLAGLRG LA GAVAVLIGV E AAYEAALEAALAAALQNIVV 553
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 590 TEEARLKHEVQDA K DQNE - LLE F RI L ELEERERKSP A INFHHT -- PF VD GKSPLQVYCE A E -- GVT D I L VTELMKKLDIL 664
Cdd:COG1196 554 EDDEVAAAAIEYL K AAKA g RAT F LP L DKIRARAALA A ALARGA ig AA VD LVASDLREAD A R yy VLG D T L LGRTLVAARLE 633
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 665 GDNAVSNLTNEEQVV V IQARTVLTLAEKWLQRIEETES A LQRKMVDLES E KEL f SKQKGY L DE E LDYRKQALDQAHKHIL 744
Cdd:COG1196 634 AALRRAVTLAGRLRE V TLEGEGGSAGGSLTGGSRRELL A ALLEAEAELE E LAE - RLAEEE L EL E EALLAEEEEERELAEA 712
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 745 E L E AMLYDALQQEAGAKVAELLS E EER E K L KVAVEQWKRQVMSELRER D AQI L RERM E L L QIAQQRI ----------- K E 813
Cdd:COG1196 713 E E E RLEEELEEEALEEQLEAERE E LLE E L L EEEELLEEEALEELPEPP D LEE L EREL E R L EREIEAL gpvnllaieey E E 792
570
....*....|...
gi 1907184480 814 LEER IETQKR Q IK 826
Cdd:COG1196 793 LEER YDFLSE Q RE 805
PTZ00121
PTZ00121 MAEBL; Provisional
50-622
2.79e-03
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 41.67
E-value: 2.79e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 50 E RE K SQELKQVREHEQRKHAVLVT E LKTKLHEE K MKELQAVR EA ll RQHEA E LLRVIKIKD NE NQ R lqalln TLRDGAPD 129
Cdd:PTZ00121 1192 E LR K AEDARKAEAARKAEEERKAE E ARKAEDAK K AEAVKKAE EA -- KKDAE E AKKAEEERN NE EI R ------ KFEEARMA 1263
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 130 KVKTVLLCEAK EEA K K GF E VE K VKMQQEIS E L K G A -- KK QVE EA ltmviqad K I KA A E IRSV yhlhq E E ITRIKK E CERE 207
Cdd:PTZ00121 1264 HFARRQAAIKA EEA R K AD E LK K AEEKKKAD E A K K A ee KK KAD EA -------- K K KA E E AKKA ----- D E AKKKAE E AKKK 1330
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 208 IRRLMEEIRFKDR A VFVLER E LGVQ A GH A QRLQLQK EA LDEQLSQ AK EAERHPGSPRR E LPY A SG A GDASDHSGSPEQQ L 287
Cdd:PTZ00121 1331 ADAAKKKAEEAKK A AEAAKA E AEAA A DE A EAAEEKA EA AEKKKEE AK KKADAAKKKAE E KKK A DE A KKKAEEDKKKADE L 1410
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 288 DEKD A RRFQLKI A ELS A IIR K LE D RNALLS EE RNELLKRLRE AE SQY K PLLD K N K RLTR K NE D LSHTLRRIES K LKFVTQ 367
Cdd:PTZ00121 1411 KKAA A AKKKADE A KKK A EEK K KA D EAKKKA EE AKKADEAKKK AE EAK K AEEA K K K AEEA K KA D EAKKKAEEAK K ADEAKK 1490
330 340 350 360 370 380 390 400
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 368 ENI E MRQR A GIIRRPSS ---- LNDLDQSQDEREI D fl KLQIV E QQNLI DE LS K TL E tagy V K SVL E RD K LLRYR K - QR KK 442
Cdd:PTZ00121 1491 KAE E AKKK A DEAKKAAE akkk ADEAKKAEEAKKA D -- EAKKA E EAKKA DE AK K AE E ---- K K KAD E LK K AEELK K a EE KK 1564
410 420 430 440 450 460 470 480
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 443 M A KLP KK P vvvetffgy D E EASLESDGSSISYQTDRTDQTPCTPEDDL E EG M AK EE TE l RFRQLTMEYQA L QR A YALLQE 522
Cdd:PTZ00121 1565 K A EEA KK A --------- E E DKNMALRKAEEAKKAEEARIEEVMKLYEE E KK M KA EE AK - KAEEAKIKAEE L KK A EEEKKK 1634
490 500 510 520 530 540 550 560
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 523 QVGGTLDAER E V K TR E Q L QAEIQRAQTRVEDLE K ALA E --- QGQDM K WI EE ---- KQALYRRNQ E LVE K IKQMETE EA RL 595
Cdd:PTZ00121 1635 VEQLKKKEAE E K K KA E E L KKAEEENKIKAAEEA K KAE E dkk KAEEA K KA EE dekk AAEALKKEA E EAK K AEELKKK EA EE 1714
570 580
....*....|....*....|....*..
gi 1907184480 596 K HEVQDA K DQN E LLEFRIL E LEERERK 622
Cdd:PTZ00121 1715 K KKAEEL K KAE E ENKIKAE E AKKEAEE 1741
PTZ00121
PTZ00121 MAEBL; Provisional
3-265
4.87e-03
MAEBL; Provisional
Pssm-ID: 173412 [Multi-domain]
Cd Length: 2084
Bit Score: 40.89
E-value: 4.87e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 3 K K G A GSRA K GDK A ETLAALQA A N E ELR A KLTDIQI EL Q -- Q EK S K VSKVERE --------- K SQ E L K QVR E HEQRKHAV L 71
Cdd:PTZ00121 1521 A K K A DEAK K AEE A KKADEAKK A E E KKK A DELKKAE EL K ka E EK K K AEEAKKA eedknmalr K AE E A K KAE E ARIEEVMK L 1600
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 72 VT E L K TKLH EE KM K ELQ A VRE A - L L RQH E A E LLR V IKI K DN E NQRLQALLNTLRDGAPD K V K TVLLCEAK EE A KK GF E VE 150
Cdd:PTZ00121 1601 YE E E K KMKA EE AK K AEE A KIK A e E L KKA E E E KKK V EQL K KK E AEEKKKAEELKKAEEEN K I K AAEEAKKA EE D KK KA E EA 1680
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 151 K VKMQQ E ISELKGA KK QV EEA ----- L TMVIQAD K I KA A E IRSVYHLHQEEITRI KKE C E RE i RRLM EE IRFKDRAVFVL 225
Cdd:PTZ00121 1681 K KAEED E KKAAEAL KK EA EEA kkaee L KKKEAEE K K KA E E LKKAEEENKIKAEEA KKE A E ED - KKKA EE AKKDEEEKKKI 1759
250 260 270 280
....*....|....*....|....*....|....*....|
gi 1907184480 226 ERELGVQAGH A QRLQLQ KEA LD E QLSQAKEAE R HPGSPRR 265
Cdd:PTZ00121 1760 AHLKKEEEKK A EEIRKE KEA VI E EELDEEDEK R RMEVDKK 1799
YhaN
COG4717 Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
489-825
7.80e-03
Uncharacterized conserved protein YhaN, contains AAA domain [Function unknown];
Pssm-ID: 443752 [Multi-domain]
Cd Length: 641
Bit Score: 39.75
E-value: 7.80e-03
10 20 30 40 50 60 70 80
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 489 D L E E GMA K E E TE L RFRQ L TM E YQ AL QRAY A L L Q E QVG gtl DA E REVKTREQ L QA E IQRAQTRVED L EKA L A E QGQDMKWI 568
Cdd:COG4717 113 E L R E ELE K L E KL L QLLP L YQ E LE AL EAEL A E L P E RLE --- EL E ERLEELRE L EE E LEELEAELAE L QEE L E E LLEQLSLA 189
90 100 110 120 130 140 150 160
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 569 E E KQA -- L YRRNQ EL VEKIKQM E T E EARLKH E VQDAKDQN E L LE FRILELEER ER KSP A INF hh TPFVDGKSP L QVYCEA 646
Cdd:COG4717 190 T E EEL qd L AEELE EL QQRLAEL E E E LEEAQE E LEELEEEL E Q LE NELEAAALE ER LKE A RLL -- LLIAAALLA L LGLGGS 267
170 180 190 200 210 220 230 240
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 647 EGVTDILVTELMKKLDI L GDNAVSN L TN E EQVVVIQ A RTVLT L AEKWLQRI EE T E SA L QRKMVDLESEK E LFSKQKGYLD 726
Cdd:COG4717 268 LLSLILTIAGVLFLVLG L LALLFLL L AR E KASLGKE A EELQA L PALEELEE EE L E EL L AALGLPPDLSP E ELLELLDRIE 347
250 260 270 280 290 300 310 320
....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1907184480 727 E ELDYRKQ A LDQAHKHI LE LEAMLYD AL QQ EAG AKVA E L L SE ----- EE REK LK VAV E QWKR Q VMSE L R E R ---- D A QIL 797
Cdd:COG4717 348 E LQELLRE A EELEEELQ LE ELEQEIA AL LA EAG VEDE E E L RA aleqa EE YQE LK EEL E ELEE Q LEEL L G E L eell E A LDE 427
330 340
....*....|....*....|....*...
gi 1907184480 798 R E RM E L L QIAQQRIK ELEE RI E TQKRQI 825
Cdd:COG4717 428 E E LE E E L EELEEELE ELEE EL E ELREEL 455
Blast search parameters
Data Source:
Precalculated data, version = cdd.v.3.21
Preset Options: Database: CDSEARCH/cdd Low complexity filter: no Composition Based Adjustment: yes E-value threshold: 0.01
