nonsense-mediated mRNA decay factor SMG7 isoform X5 [Mus musculus]
EST1 family protein( domain architecture ID 12105293)
EST1 family protein similar to Saccharomyces cerevisiae telomere elongation protein EST1 that associates with telomerase and is directly involved in telomere replication
List of domain hits
Name | Accession | Description | Interval | E-value | |||||
EST1_DNA_bind | pfam10373 | Est1 DNA/RNA binding domain; Est1 is a protein which recruits or activates telomerase at the ... |
179-438 | 1.98e-58 | |||||
Est1 DNA/RNA binding domain; Est1 is a protein which recruits or activates telomerase at the site of polymerization. This is the DNA/RNA binding domain of EST1. : Pssm-ID: 431239 Cd Length: 279 Bit Score: 202.64 E-value: 1.98e-58
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EST1 | pfam10374 | Telomerase activating protein Est1; Est1 is a protein which recruits or activates telomerase ... |
63-175 | 4.47e-16 | |||||
Telomerase activating protein Est1; Est1 is a protein which recruits or activates telomerase at the site of polymerization. Structurally it resembles a TPR-like repeat. : Pssm-ID: 463062 Cd Length: 98 Bit Score: 74.65 E-value: 4.47e-16
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Name | Accession | Description | Interval | E-value | |||||
EST1_DNA_bind | pfam10373 | Est1 DNA/RNA binding domain; Est1 is a protein which recruits or activates telomerase at the ... |
179-438 | 1.98e-58 | |||||
Est1 DNA/RNA binding domain; Est1 is a protein which recruits or activates telomerase at the site of polymerization. This is the DNA/RNA binding domain of EST1. Pssm-ID: 431239 Cd Length: 279 Bit Score: 202.64 E-value: 1.98e-58
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EST1 | pfam10374 | Telomerase activating protein Est1; Est1 is a protein which recruits or activates telomerase ... |
63-175 | 4.47e-16 | |||||
Telomerase activating protein Est1; Est1 is a protein which recruits or activates telomerase at the site of polymerization. Structurally it resembles a TPR-like repeat. Pssm-ID: 463062 Cd Length: 98 Bit Score: 74.65 E-value: 4.47e-16
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TPR | COG0457 | Tetratricopeptide (TPR) repeat [General function prediction only]; |
163-302 | 1.35e-04 | |||||
Tetratricopeptide (TPR) repeat [General function prediction only]; Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 45.00 E-value: 1.35e-04
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Name | Accession | Description | Interval | E-value | |||||
EST1_DNA_bind | pfam10373 | Est1 DNA/RNA binding domain; Est1 is a protein which recruits or activates telomerase at the ... |
179-438 | 1.98e-58 | |||||
Est1 DNA/RNA binding domain; Est1 is a protein which recruits or activates telomerase at the site of polymerization. This is the DNA/RNA binding domain of EST1. Pssm-ID: 431239 Cd Length: 279 Bit Score: 202.64 E-value: 1.98e-58
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EST1 | pfam10374 | Telomerase activating protein Est1; Est1 is a protein which recruits or activates telomerase ... |
63-175 | 4.47e-16 | |||||
Telomerase activating protein Est1; Est1 is a protein which recruits or activates telomerase at the site of polymerization. Structurally it resembles a TPR-like repeat. Pssm-ID: 463062 Cd Length: 98 Bit Score: 74.65 E-value: 4.47e-16
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TPR | COG0457 | Tetratricopeptide (TPR) repeat [General function prediction only]; |
163-302 | 1.35e-04 | |||||
Tetratricopeptide (TPR) repeat [General function prediction only]; Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 45.00 E-value: 1.35e-04
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NrfG | COG4235 | Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, ... |
163-241 | 2.44e-04 | |||||
Cytochrome c-type biogenesis protein CcmH/NrfG [Energy production and conversion, Posttranslational modification, protein turnover, chaperones]; Pssm-ID: 443378 [Multi-domain] Cd Length: 131 Bit Score: 42.30 E-value: 2.44e-04
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BepA | COG4783 | Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell ... |
163-241 | 6.17e-04 | |||||
Outer membrane protein chaperone/metalloprotease BepA/YfgC, contains M48 and TPR domains [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones]; Pssm-ID: 443813 [Multi-domain] Cd Length: 139 Bit Score: 41.33 E-value: 6.17e-04
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TadD | COG5010 | Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
169-241 | 1.15e-03 | |||||
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]; Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 40.71 E-value: 1.15e-03
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TPR | COG0457 | Tetratricopeptide (TPR) repeat [General function prediction only]; |
162-240 | 1.29e-03 | |||||
Tetratricopeptide (TPR) repeat [General function prediction only]; Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 41.92 E-value: 1.29e-03
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PilF | COG3063 | Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; |
169-210 | 2.37e-03 | |||||
Type IV pilus assembly protein PilF/PilW [Cell motility, Extracellular structures]; Pssm-ID: 442297 [Multi-domain] Cd Length: 94 Bit Score: 38.23 E-value: 2.37e-03
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TadD | COG5010 | Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, ... |
163-210 | 5.20e-03 | |||||
Flp pilus assembly protein TadD, contains TPR repeats [Intracellular trafficking, secretion, and vesicular transport, Extracellular structures]; Pssm-ID: 444034 [Multi-domain] Cd Length: 155 Bit Score: 38.79 E-value: 5.20e-03
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TPR | COG0457 | Tetratricopeptide (TPR) repeat [General function prediction only]; |
163-240 | 6.75e-03 | |||||
Tetratricopeptide (TPR) repeat [General function prediction only]; Pssm-ID: 440225 [Multi-domain] Cd Length: 245 Bit Score: 39.60 E-value: 6.75e-03
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Blast search parameters | ||||
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