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Conserved domains on  [gi|1720388130|ref|XP_030105222|]
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keratin-associated protein 13-1 isoform X1 [Mus musculus]

Protein Classification

PMG domain-containing protein( domain architecture ID 12062579)

PMG domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
PMG pfam05287
PMG protein; This family consists of several mouse anagen-specific protein mKAP13 (PMG1 and ...
 1-210 1.20e-37

PMG protein; This family consists of several mouse anagen-specific protein mKAP13 (PMG1 and PMG2). PMG1 and 2 contain characteriztic repeats reminiscent of the keratin-associated proteins (KAPs). Both genes are expressed in growing hair follicles in skin as well as in sebaceous and eccrine sweat glands. Interestingly, expression is also detected in the mammary epithelium where it is limited to the onset of the pubertal growth phase and is independent of ovarian hormones. Their broad, developmentally controlled expression pattern, together with their unique amino acid composition, demonstrate that pmg-1 and pmg-2 constitute a novel KAP gene family participating in the differentiation of all epithelial cells forming the epidermal appendages.


:

Pssm-ID: 283053 [Multi-domain]  Cd Length: 180  Bit Score: 129.17  E-value: 1.20e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720388130   1 MAYSCCSGNFSSRSLRSCLPSSGSCRGSSYPSNLVYTTTSCSPSTCQLSSSVRSGCQESCIEPIRcqesciepircqesc 80
Cdd:pfam05287   1 MSYNCCSGNFSSRSLRNHLHYPVSSCGSSCPSNLSYSTDLCSPSSCQLGSSLRDNCQETCGEPTS--------------- 65

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720388130  81 iepircspstcqlssslntgCQETCIEPIRCQRSCVVPSPCQKPCYYPRSST---PCQGTYAGSLDFGSRSCSSLAYGSR 157
Cdd:pfam05287  66 --------------------CQTSSCEPCTSSTSYCVPSPCQRSCYSPRTSCvcsPCQTTSAGSLGFGSSSCQSLGYGSN 125

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1720388130 158 SCYPVGCGNSGFRSLDCGVYGFPSLSYGSRFYYPTYMASSSCQP-CYRPICGSG 210
Cdd:pfam05287 126 SCQPLGCGSSGFRPLGCLSKGFQSLGYGSSFCRPSYVSSRSYQPsCFRPSCGSG 179
 
Name Accession Description Interval E-value
PMG pfam05287
PMG protein; This family consists of several mouse anagen-specific protein mKAP13 (PMG1 and ...
 1-210 1.20e-37

PMG protein; This family consists of several mouse anagen-specific protein mKAP13 (PMG1 and PMG2). PMG1 and 2 contain characteriztic repeats reminiscent of the keratin-associated proteins (KAPs). Both genes are expressed in growing hair follicles in skin as well as in sebaceous and eccrine sweat glands. Interestingly, expression is also detected in the mammary epithelium where it is limited to the onset of the pubertal growth phase and is independent of ovarian hormones. Their broad, developmentally controlled expression pattern, together with their unique amino acid composition, demonstrate that pmg-1 and pmg-2 constitute a novel KAP gene family participating in the differentiation of all epithelial cells forming the epidermal appendages.


Pssm-ID: 283053 [Multi-domain]  Cd Length: 180  Bit Score: 129.17  E-value: 1.20e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720388130   1 MAYSCCSGNFSSRSLRSCLPSSGSCRGSSYPSNLVYTTTSCSPSTCQLSSSVRSGCQESCIEPIRcqesciepircqesc 80
Cdd:pfam05287   1 MSYNCCSGNFSSRSLRNHLHYPVSSCGSSCPSNLSYSTDLCSPSSCQLGSSLRDNCQETCGEPTS--------------- 65

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720388130  81 iepircspstcqlssslntgCQETCIEPIRCQRSCVVPSPCQKPCYYPRSST---PCQGTYAGSLDFGSRSCSSLAYGSR 157
Cdd:pfam05287  66 --------------------CQTSSCEPCTSSTSYCVPSPCQRSCYSPRTSCvcsPCQTTSAGSLGFGSSSCQSLGYGSN 125

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1720388130 158 SCYPVGCGNSGFRSLDCGVYGFPSLSYGSRFYYPTYMASSSCQP-CYRPICGSG 210
Cdd:pfam05287 126 SCQPLGCGSSGFRPLGCLSKGFQSLGYGSSFCRPSYVSSRSYQPsCFRPSCGSG 179
 
Name Accession Description Interval E-value
PMG pfam05287
PMG protein; This family consists of several mouse anagen-specific protein mKAP13 (PMG1 and ...
 1-210 1.20e-37

PMG protein; This family consists of several mouse anagen-specific protein mKAP13 (PMG1 and PMG2). PMG1 and 2 contain characteriztic repeats reminiscent of the keratin-associated proteins (KAPs). Both genes are expressed in growing hair follicles in skin as well as in sebaceous and eccrine sweat glands. Interestingly, expression is also detected in the mammary epithelium where it is limited to the onset of the pubertal growth phase and is independent of ovarian hormones. Their broad, developmentally controlled expression pattern, together with their unique amino acid composition, demonstrate that pmg-1 and pmg-2 constitute a novel KAP gene family participating in the differentiation of all epithelial cells forming the epidermal appendages.


Pssm-ID: 283053 [Multi-domain]  Cd Length: 180  Bit Score: 129.17  E-value: 1.20e-37
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720388130   1 MAYSCCSGNFSSRSLRSCLPSSGSCRGSSYPSNLVYTTTSCSPSTCQLSSSVRSGCQESCIEPIRcqesciepircqesc 80
Cdd:pfam05287   1 MSYNCCSGNFSSRSLRNHLHYPVSSCGSSCPSNLSYSTDLCSPSSCQLGSSLRDNCQETCGEPTS--------------- 65

                          90       100       110       120       130       140       150       160
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1720388130  81 iepircspstcqlssslntgCQETCIEPIRCQRSCVVPSPCQKPCYYPRSST---PCQGTYAGSLDFGSRSCSSLAYGSR 157
Cdd:pfam05287  66 --------------------CQTSSCEPCTSSTSYCVPSPCQRSCYSPRTSCvcsPCQTTSAGSLGFGSSSCQSLGYGSN 125

                         170       180       190       200       210
                  ....*....|....*....|....*....|....*....|....*....|....
gi 1720388130 158 SCYPVGCGNSGFRSLDCGVYGFPSLSYGSRFYYPTYMASSSCQP-CYRPICGSG 210
Cdd:pfam05287 126 SCQPLGCGSSGFRPLGCLSKGFQSLGYGSSFCRPSYVSSRSYQPsCFRPSCGSG 179
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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